EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1241800.v1.1 |
| prunus_persica | Prupe.4G167100_v2.0.a1 Prupe.4G167100_v2.0.a1 |
| pyrus_communis | pycom03g18890 |
| rosa_chinensis | RchiOBHm_Chr5g0030831 RchiOBHm_Chr5g0031211 RchiOBHm_Chr5g0031411 RchiOBHm_Chr7g0194341 |
| rosa_laevigata | RLG00000002889 RLG00000009452 RLG00000010063 RLG00000020938 RLG00000025330 RLG00000029419 RLG00000033292 |
| rosa_multiflora | Rmu_sc0002426.1_g000013 Rmu_sc0002505.1_g000024 Rmu_sc0004790.1_g000012 Rmu_sc0005543.1_g000001 Rmu_sc0014478.1_g000005 Rmu_sc0014478.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00039380 Rroxscaffold_1G00049410 Rroxscaffold_4G00315890 |
| rosa_rugosa | Rorug05G0122800 Rorug05G0125100 |
| rosa_samantha | Rh1BG113100 Rh1CG264100 Rh2BG469500 Rh2DG478900 Rh5AG213800 Rh5AG217800 Rh5BG213000 Rh5BG213100 Rh5BG217500 Rh5CG236700 Rh5CG239700 Rh5CG241300 Rh5DG217500 Rh5DG221000 Rh5DG222900 Rh5DG281900 Rh5DG502600 Rh6BG212100 Rh7AG059300 Rh7CG251400 |
| rosa_wichuraiana | Rw0G012990 Rw0G015960 Rw5G019540 Rw5G019900 Rw5G027790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 13, 177 |
| AcsI | RAATTY | 1 cut(s) | 30 |
| AfaI | GTAC | 1 cut(s) | 163 |
| AluBI | AGCT | 3 cut(s) | 19, 48, 143 |
| AluI | AGCT | 3 cut(s) | 19, 48, 143 |
| Alw26I | GTCTC | 1 cut(s) | 43 |
| ApeKI | GCWGC | 3 cut(s) | 104, 143, 152 |
| ApoI | RAATTY | 1 cut(s) | 30 |
| BbvI | GCAGC | 3 cut(s) | 91, 130, 139 |
| BcoDI | GTCTC | 1 cut(s) | 43 |
| BfaI | CTAG | 1 cut(s) | 35 |
| BfmI | CTRYAG | 1 cut(s) | 153 |
| BisI | GCNGC | 3 cut(s) | 105, 144, 153 |
| BlsI | GCNGC | 3 cut(s) | 106, 145, 154 |
| BmiI | GGNNCC | 1 cut(s) | 94 |
| BseMII | CTCAG | 2 cut(s) | 130, 159 |
| BseXI | GCAGC | 3 cut(s) | 91, 130, 139 |
| BsmAI | GTCTC | 1 cut(s) | 43 |
| Bsp143I | GATC | 1 cut(s) | 171 |
| BspACI | CCGC | 2 cut(s) | 13, 177 |
| BspCNI | CTCAG | 2 cut(s) | 129, 160 |
| BspLI | GGNNCC | 1 cut(s) | 94 |
| BspMAI | CTGCAG | 1 cut(s) | 157 |
| BssMI | GATC | 1 cut(s) | 171 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 50, 152 |
| BstC8I | GCNNGC | 1 cut(s) | 46 |
| BstDEI | CTNAG | 2 cut(s) | 116, 168 |
| BstKTI | GATC | 1 cut(s) | 174 |
| BstMAI | GTCTC | 1 cut(s) | 43 |
| BstMBI | GATC | 1 cut(s) | 171 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 50, 149, 152 |
| BstSFI | CTRYAG | 1 cut(s) | 153 |
| BstV1I | GCAGC | 3 cut(s) | 91, 130, 139 |
| Cac8I | GCNNGC | 1 cut(s) | 46 |
| Csp6I | GTAC | 1 cut(s) | 162 |
| CviJI | RGCY | 4 cut(s) | 19, 48, 143, 152 |
| CviKI_1 | RGCY | 4 cut(s) | 19, 48, 143, 152 |
| CviQI | GTAC | 1 cut(s) | 162 |
| DdeI | CTNAG | 2 cut(s) | 116, 168 |
| DpnI | GATC | 1 cut(s) | 173 |
| DpnII | GATC | 1 cut(s) | 171 |
| Eco32I | GATATC | 1 cut(s) | 129 |
| EcoRV | GATATC | 1 cut(s) | 129 |
| FaiI | YATR | 2 cut(s) | 189, 200 |
| Fnu4HI | GCNGC | 3 cut(s) | 105, 144, 153 |
| Fsp4HI | GCNGC | 3 cut(s) | 105, 144, 153 |
| FspBI | CTAG | 1 cut(s) | 35 |
| GluI | GCNGC | 3 cut(s) | 105, 144, 153 |
| HindIII | AAGCTT | 1 cut(s) | 17 |
| Hpy188I | TCNGA | 1 cut(s) | 119 |
| Hpy188III | TCNNGA | 1 cut(s) | 64 |
| HpyAV | CCTTC | 1 cut(s) | 152 |
| HpyCH4V | TGCA | 4 cut(s) | 44, 107, 146, 155 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 50, 149, 152 |
| HpyF3I | CTNAG | 2 cut(s) | 116, 168 |
| Kzo9I | GATC | 1 cut(s) | 171 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LpnPI | CCDG | 3 cut(s) | 41, 75, 109 |
| Lsp1109I | GCAGC | 3 cut(s) | 91, 130, 139 |
| MaeI | CTAG | 1 cut(s) | 35 |
| MalI | GATC | 1 cut(s) | 173 |
| MboI | GATC | 1 cut(s) | 171 |
| MluCI | AATT | 1 cut(s) | 30 |
| MnlI | CCTC | 2 cut(s) | 113, 125 |
| MspA1I | CMGCKG | 1 cut(s) | 177 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 50, 149, 152 |
| NdeII | GATC | 1 cut(s) | 171 |
| NlaIV | GGNNCC | 1 cut(s) | 94 |
| PkrI | GCNGC | 3 cut(s) | 106, 145, 154 |
| PspN4I | GGNNCC | 1 cut(s) | 94 |
| PstI | CTGCAG | 1 cut(s) | 157 |
| RsaI | GTAC | 1 cut(s) | 163 |
| RsaNI | GTAC | 1 cut(s) | 162 |
| SatI | GCNGC | 3 cut(s) | 105, 144, 153 |
| Sau3AI | GATC | 1 cut(s) | 171 |
| SetI | ASST | 6 cut(s) | 21, 50, 117, 124, 145, 163 |
| SfcI | CTRYAG | 1 cut(s) | 153 |
| SgeI | CNNG | 8 cut(s) | 32, 47, 57, 68, 76, 102, 108, 113 |
| Sse9I | AATT | 1 cut(s) | 30 |
| SsiI | CCGC | 2 cut(s) | 13, 177 |
| SspMI | CTAG | 1 cut(s) | 35 |
| TasI | AATT | 1 cut(s) | 30 |
| TseI | GCWGC | 3 cut(s) | 104, 143, 152 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| XapI | RAATTY | 1 cut(s) | 30 |
| XspI | CTAG | 1 cut(s) | 35 |