EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD03G1241800.v1.1 |
| prunus_persica | Prupe.4G167100_v2.0.a1 Prupe.4G167100_v2.0.a1 |
| pyrus_communis | pycom03g18890 |
| rosa_chinensis | RchiOBHm_Chr5g0030831 RchiOBHm_Chr5g0031211 RchiOBHm_Chr5g0031411 RchiOBHm_Chr7g0194341 |
| rosa_laevigata | RLG00000002889 RLG00000009452 RLG00000010063 RLG00000020938 RLG00000025330 RLG00000029419 RLG00000033292 |
| rosa_multiflora | Rmu_sc0002426.1_g000013 Rmu_sc0002505.1_g000024 Rmu_sc0004790.1_g000012 Rmu_sc0005543.1_g000001 Rmu_sc0014478.1_g000005 Rmu_sc0014478.1_g000006 |
| rosa_roxburghii | Rroxscaffold_1G00039380 Rroxscaffold_1G00049410 Rroxscaffold_4G00315890 |
| rosa_rugosa | Rorug05G0122800 Rorug05G0125100 |
| rosa_samantha | Rh1BG113100 Rh1CG264100 Rh2BG469500 Rh2DG478900 Rh5AG213800 Rh5AG217800 Rh5BG213000 Rh5BG213100 Rh5BG217500 Rh5CG236700 Rh5CG239700 Rh5CG241300 Rh5DG217500 Rh5DG221000 Rh5DG222900 Rh5DG281900 Rh5DG502600 Rh6BG212100 Rh7AG059300 Rh7CG251400 |
| rosa_wichuraiana | Rw0G012990 Rw0G015960 Rw5G019540 Rw5G019900 Rw5G027790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 662, 754 |
| AclWI | GGATC | 1 cut(s) | 40 |
| AcoI | YGGCCR | 1 cut(s) | 525 |
| AcsI | RAATTY | 2 cut(s) | 601, 771 |
| AcvI | CACGTG | 1 cut(s) | 687 |
| AfaI | GTAC | 2 cut(s) | 403, 904 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 272, 295, 638 |
| AgeI | ACCGGT | 1 cut(s) | 139 |
| AgsI | TTSAA | 5 cut(s) | 167, 425, 474, 725, 776 |
| AluBI | AGCT | 6 cut(s) | 170, 361, 452, 760, 789, 884 |
| AluI | AGCT | 6 cut(s) | 170, 361, 452, 760, 789, 884 |
| Alw26I | GTCTC | 1 cut(s) | 591 |
| AlwI | GGATC | 1 cut(s) | 40 |
| Ama87I | CYCGRG | 1 cut(s) | 638 |
| AoxI | GGCC | 5 cut(s) | 71, 525, 629, 672, 999 |
| ApeKI | GCWGC | 6 cut(s) | 299, 446, 449, 845, 884, 893 |
| ApoI | RAATTY | 2 cut(s) | 601, 771 |
| AsiGI | ACCGGT | 1 cut(s) | 139 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 288 |
| AspLEI | GCGC | 1 cut(s) | 732 |
| AspS9I | GGNCC | 5 cut(s) | 71, 145, 629, 673, 1000 |
| AsuC2I | CCSGG | 4 cut(s) | 85, 114, 639, 640 |
| AsuHPI | GGTGA | 3 cut(s) | 104, 471, 608 |
| AvaI | CYCGRG | 1 cut(s) | 638 |
| AvaII | GGWCC | 1 cut(s) | 145 |
| BalI | TGGCCA | 1 cut(s) | 527 |
| BbrPI | CACGTG | 1 cut(s) | 687 |
| BbsI | GAAGAC | 1 cut(s) | 155 |
| BbvI | GCAGC | 6 cut(s) | 286, 433, 461, 832, 871, 880 |
| BccI | CCATC | 3 cut(s) | 191, 289, 308 |
| BceAI | ACGGC | 2 cut(s) | 58, 1014 |
| BcnI | CCSGG | 4 cut(s) | 85, 114, 639, 640 |
| BcoDI | GTCTC | 1 cut(s) | 591 |
| BfaI | CTAG | 3 cut(s) | 135, 267, 1015 |
| BfmI | CTRYAG | 4 cut(s) | 447, 648, 705, 894 |
| BglII | AGATCT | 1 cut(s) | 652 |
| BisI | GCNGC | 6 cut(s) | 300, 447, 450, 846, 885, 894 |
| BlsI | GCNGC | 6 cut(s) | 301, 448, 451, 847, 886, 895 |
| Bme1390I | CCNGG | 4 cut(s) | 85, 114, 639, 640 |
| Bme18I | GGWCC | 1 cut(s) | 145 |
| BmeT110I | CYCGRG | 1 cut(s) | 638 |
| BmgT120I | GGNCC | 5 cut(s) | 71, 145, 629, 673, 1000 |
| BmiI | GGNNCC | 3 cut(s) | 835, 979, 1002 |
| BmrFI | CCNGG | 4 cut(s) | 85, 114, 639, 640 |
| BmsI | GCATC | 1 cut(s) | 501 |
| BpiI | GAAGAC | 1 cut(s) | 155 |
| BpuMI | CCSGG | 4 cut(s) | 85, 114, 639, 640 |
| BsaAI | YACGTR | 1 cut(s) | 687 |
| BsaJI | CCNNGG | 4 cut(s) | 49, 564, 638, 937 |
| BsaWI | WCCGGW | 1 cut(s) | 139 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 272, 295, 638 |
| Bse118I | RCCGGY | 1 cut(s) | 139 |
| Bse1I | ACTGG | 2 cut(s) | 333, 535 |
| Bse3DI | GCAATG | 1 cut(s) | 554 |
| BseDI | CCNNGG | 4 cut(s) | 49, 564, 638, 937 |
| BseGI | GGATG | 1 cut(s) | 202 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 272, 295, 638 |
| BseMI | GCAATG | 1 cut(s) | 554 |
| BseMII | CTCAG | 2 cut(s) | 871, 900 |
| BseNI | ACTGG | 2 cut(s) | 333, 535 |
| BseXI | GCAGC | 6 cut(s) | 286, 433, 461, 832, 871, 880 |
| BseYI | CCCAGC | 1 cut(s) | 973 |
| BshFI | GGCC | 5 cut(s) | 73, 527, 631, 674, 1001 |
| BshTI | ACCGGT | 1 cut(s) | 139 |
| BsiHKCI | CYCGRG | 1 cut(s) | 638 |
| BsiSI | CCGG | 4 cut(s) | 85, 114, 140, 639 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 272, 295, 638 |
| BsmAI | GTCTC | 1 cut(s) | 591 |
| BsnI | GGCC | 5 cut(s) | 73, 527, 631, 674, 1001 |
| BsoBI | CYCGRG | 1 cut(s) | 638 |
| Bsp143I | GATC | 4 cut(s) | 45, 415, 652, 912 |
| BspACI | CCGC | 2 cut(s) | 662, 754 |
| BspANI | GGCC | 5 cut(s) | 73, 527, 631, 674, 1001 |
| BspCNI | CTCAG | 2 cut(s) | 870, 901 |
| BspHI | TCATGA | 1 cut(s) | 556 |
| BspLI | GGNNCC | 3 cut(s) | 835, 979, 1002 |
| BspMAI | CTGCAG | 2 cut(s) | 451, 898 |
| BspPI | GGATC | 1 cut(s) | 40 |
| BsrDI | GCAATG | 1 cut(s) | 554 |
| BsrFI | RCCGGY | 1 cut(s) | 139 |
| BsrI | ACTGG | 2 cut(s) | 333, 535 |
| BssAI | RCCGGY | 1 cut(s) | 139 |
| BssECI | CCNNGG | 4 cut(s) | 49, 564, 638, 937 |
| BssMI | GATC | 4 cut(s) | 45, 415, 652, 912 |
| BssT1I | CCWWGG | 1 cut(s) | 564 |
| Bst4CI | ACNGT | 3 cut(s) | 13, 330, 938 |
| Bst6I | CTCTTC | 2 cut(s) | 223, 705 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 455, 791, 893 |
| BstBAI | YACGTR | 1 cut(s) | 687 |
| BstC8I | GCNNGC | 4 cut(s) | 430, 444, 460, 787 |
| BstDEI | CTNAG | 2 cut(s) | 857, 909 |
| BstDSI | CCRYGG | 1 cut(s) | 937 |
| BstF5I | GGATG | 1 cut(s) | 202 |
| BstHHI | GCGC | 1 cut(s) | 732 |
| BstKTI | GATC | 4 cut(s) | 48, 418, 655, 915 |
| BstMAI | GTCTC | 1 cut(s) | 591 |
| BstMBI | GATC | 4 cut(s) | 45, 415, 652, 912 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 104, 176, 308, 455, 791, 890, 893 |
| BstNSI | RCATGY | 1 cut(s) | 306 |
| BstSCI | CCNGG | 4 cut(s) | 83, 112, 637, 638 |
| BstSFI | CTRYAG | 4 cut(s) | 447, 648, 705, 894 |
| BstV1I | GCAGC | 6 cut(s) | 286, 433, 461, 832, 871, 880 |
| BstV2I | GAAGAC | 1 cut(s) | 155 |
| BstX2I | RGATCY | 2 cut(s) | 45, 652 |
| BstYI | RGATCY | 2 cut(s) | 45, 652 |
| BsuRI | GGCC | 5 cut(s) | 73, 527, 631, 674, 1001 |
| BtgI | CCRYGG | 1 cut(s) | 937 |
| BtsCI | GGATG | 1 cut(s) | 202 |
| BtsI | GCAGTG | 2 cut(s) | 588, 925 |
| BtsIMutI | CAGTG | 5 cut(s) | 9, 340, 528, 588, 925 |
| Cac8I | GCNNGC | 4 cut(s) | 430, 444, 460, 787 |
| CciI | TCATGA | 1 cut(s) | 556 |
| CfoI | GCGC | 1 cut(s) | 732 |
| Cfr10I | RCCGGY | 1 cut(s) | 139 |
| Cfr13I | GGNCC | 5 cut(s) | 71, 145, 629, 673, 1000 |
| Cfr9I | CCCGGG | 1 cut(s) | 638 |
| Csp6I | GTAC | 2 cut(s) | 402, 903 |
| CspAI | ACCGGT | 1 cut(s) | 139 |
| CviAII | CATG | 4 cut(s) | 303, 389, 557, 733 |
| CviQI | GTAC | 2 cut(s) | 402, 903 |
| DdeI | CTNAG | 2 cut(s) | 857, 909 |
| DpnI | GATC | 4 cut(s) | 47, 417, 654, 914 |
| DpnII | GATC | 4 cut(s) | 45, 415, 652, 912 |
| EaeI | YGGCCR | 1 cut(s) | 525 |
| Eam1104I | CTCTTC | 2 cut(s) | 223, 705 |
| EarI | CTCTTC | 2 cut(s) | 223, 705 |
| Eco130I | CCWWGG | 1 cut(s) | 564 |
| Eco32I | GATATC | 2 cut(s) | 870, 985 |
| Eco47I | GGWCC | 1 cut(s) | 145 |
| Eco72I | CACGTG | 1 cut(s) | 687 |
| Eco88I | CYCGRG | 1 cut(s) | 638 |
| EcoRV | GATATC | 2 cut(s) | 870, 985 |
| EcoT14I | CCWWGG | 1 cut(s) | 564 |
| EcoT22I | ATGCAT | 1 cut(s) | 220 |
| ErhI | CCWWGG | 1 cut(s) | 564 |
| FaeI | CATG | 4 cut(s) | 306, 392, 560, 736 |
| FatI | CATG | 4 cut(s) | 302, 388, 556, 732 |
| FauNDI | CATATG | 2 cut(s) | 214, 969 |
| Fnu4HI | GCNGC | 6 cut(s) | 300, 447, 450, 846, 885, 894 |
| FokI | GGATG | 1 cut(s) | 209 |
| Fsp4HI | GCNGC | 6 cut(s) | 300, 447, 450, 846, 885, 894 |
| FspBI | CTAG | 3 cut(s) | 135, 267, 1015 |
| GlaI | GCGC | 1 cut(s) | 731 |
| GluI | GCNGC | 6 cut(s) | 300, 447, 450, 846, 885, 894 |
| GsaI | CCCAGC | 1 cut(s) | 977 |
| HaeIII | GGCC | 5 cut(s) | 73, 527, 631, 674, 1001 |
| HapII | CCGG | 4 cut(s) | 85, 114, 140, 639 |
| HhaI | GCGC | 1 cut(s) | 732 |
| Hin1II | CATG | 4 cut(s) | 306, 392, 560, 736 |
| Hin6I | GCGC | 1 cut(s) | 730 |
| HinP1I | GCGC | 1 cut(s) | 730 |
| HincII | GTYRAC | 1 cut(s) | 7 |
| HindII | GTYRAC | 1 cut(s) | 7 |
| HindIII | AAGCTT | 2 cut(s) | 359, 758 |
| HinfI | GANTC | 1 cut(s) | 713 |
| HpaII | CCGG | 4 cut(s) | 85, 114, 140, 639 |
| HphI | GGTGA | 3 cut(s) | 104, 471, 608 |
| Hpy166II | GTNNAC | 3 cut(s) | 7, 145, 745 |
| Hpy188I | TCNGA | 5 cut(s) | 42, 50, 294, 510, 860 |
| Hpy188III | TCNNGA | 2 cut(s) | 557, 805 |
| Hpy8I | GTNNAC | 3 cut(s) | 7, 145, 745 |
| HpyAV | CCTTC | 4 cut(s) | 187, 299, 501, 893 |
| HpyCH4III | ACNGT | 3 cut(s) | 13, 330, 938 |
| HpyCH4IV | ACGT | 2 cut(s) | 434, 686 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 104, 176, 308, 455, 791, 890, 893 |
| HpyF3I | CTNAG | 2 cut(s) | 857, 909 |
| HpySE526I | ACGT | 2 cut(s) | 434, 686 |
| Hsp92II | CATG | 4 cut(s) | 306, 392, 560, 736 |
| HspAI | GCGC | 1 cut(s) | 730 |
| Kzo9I | GATC | 4 cut(s) | 45, 415, 652, 912 |
| LmnI | GCTCC | 2 cut(s) | 764, 977 |
| Lsp1109I | GCAGC | 6 cut(s) | 286, 433, 461, 832, 871, 880 |
| LweI | GCATC | 1 cut(s) | 501 |
| MaeI | CTAG | 3 cut(s) | 135, 267, 1015 |
| MaeII | ACGT | 2 cut(s) | 434, 686 |
| MaeIII | GTNAC | 1 cut(s) | 122 |
| MalI | GATC | 4 cut(s) | 47, 417, 654, 914 |
| MboI | GATC | 4 cut(s) | 45, 415, 652, 912 |
| MboII | GAAGA | 5 cut(s) | 55, 155, 240, 722, 1002 |
| MflI | RGATCY | 2 cut(s) | 45, 652 |
| MlsI | TGGCCA | 1 cut(s) | 527 |
| MluCI | AATT | 5 cut(s) | 36, 474, 601, 633, 771 |
| MluNI | TGGCCA | 1 cut(s) | 527 |
| MlyI | GAGTC | 1 cut(s) | 722 |
| MmeI | TCCRAC | 2 cut(s) | 277, 682 |
| MnlI | CCTC | 7 cut(s) | 44, 88, 224, 602, 610, 854, 866 |
| Mox20I | TGGCCA | 1 cut(s) | 527 |
| Mph1103I | ATGCAT | 1 cut(s) | 220 |
| MroXI | GAANNNNTTC | 1 cut(s) | 288 |
| MscI | TGGCCA | 1 cut(s) | 527 |
| MseI | TTAA | 4 cut(s) | 221, 621, 698, 995 |
| MslI | CAYNNNNRTG | 1 cut(s) | 387 |
| Msp20I | TGGCCA | 1 cut(s) | 527 |
| MspI | CCGG | 4 cut(s) | 85, 114, 140, 639 |
| MspR9I | CCNGG | 4 cut(s) | 85, 114, 639, 640 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 104, 176, 308, 455, 791, 890, 893 |
| NciI | CCSGG | 4 cut(s) | 85, 114, 639, 640 |
| NdeI | CATATG | 2 cut(s) | 214, 969 |
| NdeII | GATC | 4 cut(s) | 45, 415, 652, 912 |
| NlaIII | CATG | 4 cut(s) | 306, 392, 560, 736 |
| NlaIV | GGNNCC | 3 cut(s) | 835, 979, 1002 |
| NmuCI | GTSAC | 1 cut(s) | 122 |
| NsiI | ATGCAT | 1 cut(s) | 220 |
| NspI | RCATGY | 1 cut(s) | 306 |
| PagI | TCATGA | 1 cut(s) | 556 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 46 |
| PdmI | GAANNNNTTC | 1 cut(s) | 288 |
| PinAI | ACCGGT | 1 cut(s) | 139 |
| PkrI | GCNGC | 6 cut(s) | 301, 448, 451, 847, 886, 895 |
| PleI | GAGTC | 1 cut(s) | 721 |
| PmaCI | CACGTG | 1 cut(s) | 687 |
| PmlI | CACGTG | 1 cut(s) | 687 |
| PpsI | GAGTC | 1 cut(s) | 721 |
| Ppu21I | YACGTR | 1 cut(s) | 687 |
| PspCI | CACGTG | 1 cut(s) | 687 |
| PspFI | CCCAGC | 1 cut(s) | 973 |
| PspN4I | GGNNCC | 3 cut(s) | 835, 979, 1002 |
| PspPI | GGNCC | 5 cut(s) | 71, 145, 629, 673, 1000 |
| PstI | CTGCAG | 2 cut(s) | 451, 898 |
| PsuI | RGATCY | 2 cut(s) | 45, 652 |
| RsaI | GTAC | 2 cut(s) | 403, 904 |
| RsaNI | GTAC | 2 cut(s) | 402, 903 |
| RseI | CAYNNNNRTG | 1 cut(s) | 387 |
| SaqAI | TTAA | 4 cut(s) | 221, 621, 698, 995 |
| SatI | GCNGC | 6 cut(s) | 300, 447, 450, 846, 885, 894 |
| Sau3AI | GATC | 4 cut(s) | 45, 415, 652, 912 |
| Sau96I | GGNCC | 5 cut(s) | 71, 145, 629, 673, 1000 |
| SchI | GAGTC | 1 cut(s) | 722 |
| ScrFI | CCNGG | 4 cut(s) | 85, 114, 639, 640 |
| SfaNI | GCATC | 1 cut(s) | 501 |
| SfcI | CTRYAG | 4 cut(s) | 447, 648, 705, 894 |
| SinI | GGWCC | 1 cut(s) | 145 |
| SmaI | CCCGGG | 1 cut(s) | 640 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 387 |
| Sse9I | AATT | 5 cut(s) | 36, 474, 601, 633, 771 |
| SsiI | CCGC | 2 cut(s) | 662, 754 |
| SspMI | CTAG | 3 cut(s) | 135, 267, 1015 |
| StyD4I | CCNGG | 4 cut(s) | 83, 112, 637, 638 |
| StyI | CCWWGG | 1 cut(s) | 564 |
| TaaI | ACNGT | 3 cut(s) | 13, 330, 938 |
| TaiI | ACGT | 2 cut(s) | 437, 689 |
| TasI | AATT | 5 cut(s) | 36, 474, 601, 633, 771 |
| TatI | WGTACW | 1 cut(s) | 401 |
| Tru1I | TTAA | 4 cut(s) | 221, 621, 698, 995 |
| Tru9I | TTAA | 4 cut(s) | 221, 621, 698, 995 |
| TscAI | CASTG | 5 cut(s) | 16, 340, 535, 588, 925 |
| TseFI | GTSAC | 1 cut(s) | 122 |
| TseI | GCWGC | 6 cut(s) | 299, 446, 449, 845, 884, 893 |
| Tsp45I | GTSAC | 1 cut(s) | 122 |
| TspDTI | ATGAA | 4 cut(s) | 206, 377, 457, 956 |
| TspMI | CCCGGG | 1 cut(s) | 638 |
| TspRI | CASTG | 5 cut(s) | 16, 340, 535, 588, 925 |
| VpaK11BI | GGWCC | 1 cut(s) | 145 |
| XapI | RAATTY | 2 cut(s) | 601, 771 |
| XceI | RCATGY | 1 cut(s) | 306 |
| XmaI | CCCGGG | 1 cut(s) | 638 |
| XmnI | GAANNNNTTC | 1 cut(s) | 288 |
| XspI | CTAG | 3 cut(s) | 135, 267, 1015 |
| Zsp2I | ATGCAT | 1 cut(s) | 220 |