Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0005329.1

Orthogroup ID

OG0001839

Physical Location & Seq

Genomic Coordinates Reverse (-)

87872 .. 90259

Gene Structure 2388 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0005329.1_g000013.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2388 bp

atgacatactcagtaaaaaaccctcctgcaaagagcaaatatacccttcaaatccgctatggtggacactttgaaactgagagtgatcctacttatcaaaactaccaaaactatactggagaaagagcgatttgggttgaaaatcttgataattattcgggaaaggcttgttggagtgacgtcaatgatcttgcaagtaagctgggctaccaaaatactcgggaaatacatagaaggcataaaggacgtctgttggaaattacttctcacgatgatgtaaccgaaatgattagtcaacttggagctaatcgagagttggtactgtatattgttggacagagagaagaggaagcacaggcacaaaatcctacaattctatcttggaactgtcgtggacttaacaggccatcaaccagggctatgttaagagttcttattctgacatatgatcccacgattattattcttatagagactcgcctgtcatcctcggctattgggaaaatctctcactttctggggtttcaaaattttagggcttcctctgccgaaagaaatgtgtcttatgttaagaatttcactgccaacacaaatgaggatgaggaccaggatcaggatcaggatcaggatgattcagataattgtgttggattggccgtgttatggaaatcaaatataaagttggagttgtctgataactcagacaactatcttgattttgaggttgaggtccctggtactgataaaatttggaagtttacagcattttatggacacccgacaaaaaagagactctcatggatgtggctggagcaattaaaattttcaaatgatagatcacaaatatctgaatggttagttgttggggatcttaatgaaatttccaatcaaacagagaaaatgggtggaagcgcgaagaatccagcggatatatcaaggttcacggagtgcttggaaaaatgtagtcttcaagatttgtcttttgagggtgataactttacgtggacaggccctggaggagtcagagagaggcttgataggggagtggcgtcatggacttggataaaattatttcctcatcatgccaaggtactacatcttactgataaaacaatctcagatcacattcctatattggttgaaactgatagtcgaaaacaaaaggtgttaaagacagcaactctaatgttgaagatggagacattgctttcctttgttgctaaggtggaaagtgcatatcatcagaaaccttaccttgcgacagtgtcgcttatgaaaactcaaatgaggaaaattccggatttctactttgacattgcacagaatgtggcacctcatatttttcaagtgaagtatattgcagtacatgtacacaacgaggatcaggatatagtgaagtatgaacggctagttactcttactatatatagtaatcttcgtgaattattgttgaattgcatggccatccctatgccaacccgaaagtatgacattgcaattccagaagagtttccaagtcaaaagagcaatgtggttaatctttcagagtatctagtgcaaacatggaagctcgtggagttaattcctgcggatcgtaaaatatttcaacaagagattttggaacagaaaatatataagcaagtggaaaatttgattaggtggtatacacaagtgaagaagacaacaaatgatattggccatgggtactcaaatatattaaaaaagttagaagaggaggcatcacagagtagccgtgctgtcattgtgtgcaataccatgatctctctatttagggggggaatgattaaacctcgaggcacaataacagagcttaacgataaaatacgtcctgaatacttgtattactttccactaggacccaaccgtcgtggagattgcggagaaacgattgagtttttgctggacacttctggatggcgtcatttagagaatggttctgaatataatattgatactgaagagcaattaattcaaggactaaccgaccttgaagaaagaatgtttaaaacaaatagagacatcatgctcgtgactaatagattgagaccctggataaagttgattacagacaacgacactgaaaaggagaagctcgctaggttcgttgacacaagtacaattaaaagccaacttgagttgctgcaacaaattggctgcatttcaatttcgaaaaataatgaaattgctttagaagctgacacagatcgcaaatcaatagtcgaccggcttgagaatgcagcagatgaagccttcaaaacacttaaaaataagtccacgaaaataaagtctatgacttactcagaatacctgtacaagctcaaagaggcatacaaaagtgggaaagttgcgaagcgaaaaataggatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RVT_1 RVT_3 zf-RVT

Protein Analysis

795

Amino Acids

91.8

Weight (kDa)

6.41

Isoelectric Point (pI)

33.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001839)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g08221 FvH4_1g08222 FvH4_2g30342 FvH4_2g30381 FvH4_2g30381 FvH4_5g02241 FvH4_5g16511 FvH4_5g16530 FvH4_5g16530 FvH4_5g16530 FvH4_5g16550 FvH4_6g40845 FvH4_6g54220 FvH4_6g54230 FvH4_6g54241 FvH4_6g54250
rosa_chinensis	RchiOBHm_Chr7g0179571
rosa_laevigata	RLG00000005342
rosa_multiflora	Rmu_sc0005329.1_g000009 Rmu_sc0005329.1_g000013 Rmu_sc0005329.1_g000021 Rmu_sc0009881.1_g000006 Rmu_sc0014842.1_g000006
rosa_roxburghii	Rroxscaffold_155G00443920 Rroxscaffold_155G00443930 Rroxscaffold_3G00273650 Rroxscaffold_3G00273700 Rroxscaffold_3G00274960
rosa_rugosa	Rorug06G0425700 Rorug06G0425800 Rorug06G0425900 Rorug06G0426000 Rorug06G0426200
rosa_samantha	Rh7AG015300 Rh7AG025400 Rh7AG025500 Rh7AG025600 Rh7BG014800 Rh7BG014900 Rh7BG024900 Rh7CG015500 Rh7CG015600 Rh7CG026200 Rh7CG026400 Rh7CG026600
rosa_wichuraiana	Rw7G002040 Rw7G002050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	481, 1884
AatII	GACGTC	2 cut(s)	183, 250
AbsI	CCTCGAGG	1 cut(s)	1812
AccB1I	GGYRCC	1 cut(s)	1330
AccI	GTMKAC	2 cut(s)	1664, 2241
AccII	CGCG	1 cut(s)	914
AccIII	TCCGGA	1 cut(s)	1297
AciI	CCGC	4 cut(s)	55, 926, 1589, 1899
AclWI	GGATC	8 cut(s)	80, 443, 618, 624, 630, 876, 1389, 1599
AcoI	YGGCCR	3 cut(s)	654, 1461, 1696
AcsI	RAATTY	7 cut(s)	529, 574, 747, 821, 879, 1293, 1648
AcuI	CTGAAG	1 cut(s)	1998
AcyI	GRCGYC	4 cut(s)	180, 247, 1049, 1939
AdeI	CACNNNGTG	1 cut(s)	948
AfaI	GTAC	8 cut(s)	321, 739, 1092, 1365, 1371, 1706, 2137, 2333
AfiI	CCNNNNNNNGG	2 cut(s)	613, 663
AflIII	ACRYGT	1 cut(s)	1366
AjnI	CCWGG	5 cut(s)	413, 606, 733, 1012, 2069
AjuI	GAANNNNNNNTTGG	2 cut(s)	154, 186
AluBI	AGCT	7 cut(s)	202, 305, 1570, 1831, 2113, 2216, 2338
AluI	AGCT	7 cut(s)	202, 305, 1570, 1831, 2113, 2216, 2338
Alw26I	GTCTC	5 cut(s)	467, 784, 1193, 2031, 2059
AlwI	GGATC	8 cut(s)	80, 443, 618, 624, 630, 876, 1389, 1599
AlwNI	CAGNNNCTG	1 cut(s)	1013
Ama87I	CYCGRG	2 cut(s)	219, 1812
Aor13HI	TCCGGA	1 cut(s)	1297
AoxI	GGCC	5 cut(s)	404, 654, 1009, 1461, 1696
ApeKI	GCWGC	3 cut(s)	2161, 2175, 2258
ApoI	RAATTY	7 cut(s)	529, 574, 747, 821, 879, 1293, 1648
ArsI	GACNNNNNNTTYG	4 cut(s)	2223, 2255, 2291, 2323
AseI	ATTAAT	1 cut(s)	1988
Asp700I	GAANNNNTTC	1 cut(s)	1509
AspLEI	GCGC	1 cut(s)	914
AspS9I	GGNCC	4 cut(s)	604, 730, 1010, 1877
AsuHPI	GGTGA	1 cut(s)	1001
AsuII	TTCGAA	1 cut(s)	2189
AvaI	CYCGRG	2 cut(s)	219, 1812
AvaII	GGWCC	3 cut(s)	604, 730, 1877
BalI	TGGCCA	2 cut(s)	1463, 1698
BanI	GGYRCC	1 cut(s)	1330
BauI	CACGAG	2 cut(s)	1571, 2048
BbsI	GAAGAC	2 cut(s)	959, 1685
BbvI	GCAGC	3 cut(s)	2148, 2162, 2270
BccI	CCATC	4 cut(s)	415, 1189, 1472, 1929
BceAI	ACGGC	3 cut(s)	641, 1421, 1737
BciT130I	CCWGG	5 cut(s)	415, 608, 735, 1014, 2071
BcoDI	GTCTC	5 cut(s)	467, 784, 1193, 2031, 2059
BfaI	CTAG	4 cut(s)	1409, 1553, 1874, 2118
BisI	GCNGC	3 cut(s)	2162, 2176, 2259
BlsI	GCNGC	3 cut(s)	2163, 2177, 2260
Bme1390I	CCNGG	5 cut(s)	415, 608, 735, 1014, 2071
Bme18I	GGWCC	3 cut(s)	604, 730, 1877
BmeT110I	CYCGRG	2 cut(s)	219, 1812
BmgT120I	GGNCC	4 cut(s)	604, 730, 1010, 1877
BmiI	GGNNCC	3 cut(s)	732, 1332, 1879
BmrFI	CCNGG	5 cut(s)	415, 608, 735, 1014, 2071
BmsI	GCATC	1 cut(s)	1748
BpiI	GAAGAC	2 cut(s)	959, 1685
BpmI	CTGGAG	3 cut(s)	138, 830, 1035
Bpu10I	CCTNAGC	1 cut(s)	1221
Bpu14I	TTCGAA	1 cut(s)	2189
BpuEI	CTTGAG	2 cut(s)	2174, 2270
BsaAI	YACGTR	1 cut(s)	1002
BsaBI	GATNNNNATC	2 cut(s)	615, 621
BsaHI	GRCGYC	4 cut(s)	180, 247, 1049, 1939
BsaI	GGTCTC	1 cut(s)	2059
BsaJI	CCNNGG	7 cut(s)	414, 489, 733, 1012, 1086, 1699, 2069
BsaWI	WCCGGW	1 cut(s)	1297
Bsc4I	CCNNNNNNNGG	2 cut(s)	613, 663
Bse118I	RCCGGY	1 cut(s)	2244
Bse1I	ACTGG	1 cut(s)	121
Bse3DI	GCAATG	4 cut(s)	1202, 1314, 1491, 1534
Bse8I	GATNNNNATC	2 cut(s)	615, 621
BseAI	TCCGGA	1 cut(s)	1297
BseBI	CCWGG	5 cut(s)	415, 608, 735, 1014, 2071
BseDI	CCNNGG	7 cut(s)	414, 489, 733, 1012, 1086, 1699, 2069
BseGI	GGATG	6 cut(s)	485, 604, 634, 807, 1464, 1940
BseJI	GATNNNNATC	2 cut(s)	615, 621
BseLI	CCNNNNNNNGG	2 cut(s)	613, 663
BseMI	GCAATG	4 cut(s)	1202, 1314, 1491, 1534
BseMII	CTCAG	5 cut(s)	24, 69, 714, 1131, 2334
BseNI	ACTGG	1 cut(s)	121
BseRI	GAGGAG	2 cut(s)	1032, 1748
BseXI	GCAGC	3 cut(s)	2148, 2162, 2270
BseYI	CCCAGC	1 cut(s)	202
Bsh1236I	CGCG	1 cut(s)	914
Bsh1285I	CGRYCG	1 cut(s)	2245
BshFI	GGCC	5 cut(s)	406, 656, 1011, 1463, 1698
BshNI	GGYRCC	1 cut(s)	1330
BsiEI	CGRYCG	1 cut(s)	2245
BsiHKCI	CYCGRG	2 cut(s)	219, 1812
BsiSI	CCGG	2 cut(s)	1298, 2245
BslFI	GGGAC	1 cut(s)	716
BslI	CCNNNNNNNGG	2 cut(s)	613, 663
BsmAI	GTCTC	5 cut(s)	467, 784, 1193, 2031, 2059
BsmFI	GGGAC	1 cut(s)	716
BsmI	GAATGC	1 cut(s)	2260
BsnI	GGCC	5 cut(s)	406, 656, 1011, 1463, 1698
Bso31I	GGTCTC	1 cut(s)	2059
BsoBI	CYCGRG	2 cut(s)	219, 1812
Bsp119I	TTCGAA	1 cut(s)	2189
Bsp13I	TCCGGA	1 cut(s)	1297
Bsp1407I	TGTACA	2 cut(s)	1369, 2331
Bsp19I	CCATGG	1 cut(s)	1699
BspACI	CCGC	4 cut(s)	55, 926, 1589, 1899
BspANI	GGCC	5 cut(s)	406, 656, 1011, 1463, 1698
BspCNI	CTCAG	5 cut(s)	23, 70, 713, 1130, 2333
BspEI	TCCGGA	1 cut(s)	1297
BspFNI	CGCG	1 cut(s)	914
BspLI	GGNNCC	3 cut(s)	732, 1332, 1879
BspPI	GGATC	8 cut(s)	80, 443, 618, 624, 630, 876, 1389, 1599
BspQI	GCTCTTC	1 cut(s)	1974
BspT104I	TTCGAA	1 cut(s)	2189
BspT107I	GGYRCC	1 cut(s)	1330
BspTNI	GGTCTC	1 cut(s)	2059
BsrDI	GCAATG	4 cut(s)	1202, 1314, 1491, 1534
BsrFI	RCCGGY	1 cut(s)	2244
BsrGI	TGTACA	2 cut(s)	1369, 2331
BsrI	ACTGG	1 cut(s)	121
BssAI	RCCGGY	1 cut(s)	2244
BssECI	CCNNGG	7 cut(s)	414, 489, 733, 1012, 1086, 1699, 2069
BssNAI	GTATAC	1 cut(s)	1665
BssNI	GRCGYC	4 cut(s)	180, 247, 1049, 1939
BssSI	CACGAG	2 cut(s)	1571, 2048
BssT1I	CCWWGG	2 cut(s)	1086, 1699
Bst1107I	GTATAC	1 cut(s)	1665
Bst2BI	CACGAG	2 cut(s)	1571, 2048
Bst2UI	CCWGG	5 cut(s)	415, 608, 735, 1014, 2071
Bst4CI	ACNGT	4 cut(s)	324, 389, 1264, 1886
Bst6I	CTCTTC	4 cut(s)	339, 1500, 1725, 1974
BstACI	GRCGYC	4 cut(s)	180, 247, 1049, 1939
BstAUI	TGTACA	2 cut(s)	1369, 2331
BstBAI	YACGTR	1 cut(s)	1002
BstBI	TTCGAA	1 cut(s)	2189
BstC8I	GCNNGC	1 cut(s)	2115
BstDEI	CTNAG	6 cut(s)	10, 78, 700, 1117, 1221, 2320
BstDSI	CCRYGG	1 cut(s)	1699
BstF5I	GGATG	6 cut(s)	485, 604, 634, 807, 1464, 1940
BstFNI	CGCG	1 cut(s)	914
BstHHI	GCGC	1 cut(s)	914
BstMAI	GTCTC	5 cut(s)	467, 784, 1193, 2031, 2059
BstMCI	CGRYCG	1 cut(s)	2245
BstMWI	GCNNNNNNNGC	3 cut(s)	545, 2213, 2267
BstNI	CCWGG	5 cut(s)	415, 608, 735, 1014, 2071
BstNSI	RCATGY	1 cut(s)	1370
BstSCI	CCNGG	5 cut(s)	413, 606, 733, 1012, 2069
BstUI	CGCG	1 cut(s)	914
BstV1I	GCAGC	3 cut(s)	2148, 2162, 2270
BstV2I	GAAGAC	2 cut(s)	959, 1685
BstX2I	RGATCY	1 cut(s)	868
BstYI	RGATCY	1 cut(s)	868
BstZ17I	GTATAC	1 cut(s)	1665
BsuRI	GGCC	5 cut(s)	406, 656, 1011, 1463, 1698
BtgI	CCRYGG	1 cut(s)	1699
BtsCI	GGATG	6 cut(s)	485, 604, 634, 807, 1464, 1940
BtsI	GCAGTG	1 cut(s)	579
BtsIMutI	CAGTG	3 cut(s)	579, 1269, 2097
Cac8I	GCNNGC	1 cut(s)	2115
CaiI	CAGNNNCTG	1 cut(s)	1013
CfoI	GCGC	1 cut(s)	914
Cfr10I	RCCGGY	1 cut(s)	2244
Cfr13I	GGNCC	4 cut(s)	604, 730, 1010, 1877
CseI	GACGC	2 cut(s)	1038, 1928
Csp6I	GTAC	8 cut(s)	320, 738, 1091, 1364, 1370, 1705, 2136, 2332
CspCI	CAANNNNNGTGG	2 cut(s)	1870, 1905
CviAII	CATG	9 cut(s)	798, 1053, 1082, 1367, 1459, 1563, 1700, 1777, 2044
CviQI	GTAC	8 cut(s)	320, 738, 1091, 1364, 1370, 1705, 2136, 2332
DdeI	CTNAG	6 cut(s)	10, 78, 700, 1117, 1221, 2320
DraI	TTTAAA	1 cut(s)	2026
DraIII	CACNNNGTG	1 cut(s)	948
DrdI	GACNNNNNNGTC	2 cut(s)	481, 1884
DseDI	GACNNNNNNGTC	2 cut(s)	481, 1884
EaeI	YGGCCR	3 cut(s)	654, 1461, 1696
Eam1104I	CTCTTC	4 cut(s)	339, 1500, 1725, 1974
EarI	CTCTTC	4 cut(s)	339, 1500, 1725, 1974
Eco130I	CCWWGG	2 cut(s)	1086, 1699
Eco31I	GGTCTC	1 cut(s)	2059
Eco47I	GGWCC	3 cut(s)	604, 730, 1877
Eco57I	CTGAAG	1 cut(s)	1998
Eco88I	CYCGRG	2 cut(s)	219, 1812
EcoO109I	RGGNCCY	3 cut(s)	730, 1010, 1877
EcoRII	CCWGG	5 cut(s)	413, 606, 733, 1012, 2069
EcoT14I	CCWWGG	2 cut(s)	1086, 1699
ErhI	CCWWGG	2 cut(s)	1086, 1699
FaeI	CATG	9 cut(s)	801, 1056, 1085, 1370, 1462, 1566, 1703, 1780, 2047
FaqI	GGGAC	1 cut(s)	716
FatI	CATG	9 cut(s)	797, 1052, 1081, 1366, 1458, 1562, 1699, 1776, 2043
FauNDI	CATATG	1 cut(s)	445
FblI	GTMKAC	2 cut(s)	1664, 2241
Fnu4HI	GCNGC	3 cut(s)	2162, 2176, 2259
FokI	GGATG	6 cut(s)	472, 611, 641, 814, 1451, 1947
Fsp4HI	GCNGC	3 cut(s)	2162, 2176, 2259
FspBI	CTAG	4 cut(s)	1409, 1553, 1874, 2118
GlaI	GCGC	1 cut(s)	913
GluI	GCNGC	3 cut(s)	2162, 2176, 2259
GsaI	CCCAGC	1 cut(s)	206
GsuI	CTGGAG	3 cut(s)	138, 830, 1035
HaeIII	GGCC	5 cut(s)	406, 656, 1011, 1463, 1698
HapII	CCGG	2 cut(s)	1298, 2245
HgaI	GACGC	2 cut(s)	1038, 1928
HhaI	GCGC	1 cut(s)	914
Hin1I	GRCGYC	4 cut(s)	180, 247, 1049, 1939
Hin1II	CATG	9 cut(s)	801, 1056, 1085, 1370, 1462, 1566, 1703, 1780, 2047
Hin6I	GCGC	1 cut(s)	912
HinP1I	GCGC	1 cut(s)	912
HincII	GTYRAC	3 cut(s)	296, 2128, 2242
HindII	GTYRAC	3 cut(s)	296, 2128, 2242
HinfI	GANTC	5 cut(s)	475, 632, 792, 919, 1020
HpaII	CCGG	2 cut(s)	1298, 2245
HphI	GGTGA	1 cut(s)	1001
Hpy99I	CGWCG	1 cut(s)	1890
HpyAV	CCTTC	3 cut(s)	56, 228, 2281
HpyCH4III	ACNGT	4 cut(s)	324, 389, 1264, 1886
HpyCH4IV	ACGT	4 cut(s)	180, 247, 1001, 1846
HpyF10VI	GCNNNNNNNGC	3 cut(s)	545, 2213, 2267
HpyF3I	CTNAG	6 cut(s)	10, 78, 700, 1117, 1221, 2320
HpySE526I	ACGT	4 cut(s)	180, 247, 1001, 1846
Hsp92I	GRCGYC	4 cut(s)	180, 247, 1049, 1939
Hsp92II	CATG	9 cut(s)	801, 1056, 1085, 1370, 1462, 1566, 1703, 1780, 2047
HspAI	GCGC	1 cut(s)	912
Kpn2I	TCCGGA	1 cut(s)	1297
LguI	GCTCTTC	1 cut(s)	1974
LmnI	GCTCC	2 cut(s)	302, 811
Lsp1109I	GCAGC	3 cut(s)	2148, 2162, 2270
LweI	GCATC	1 cut(s)	1748
MaeI	CTAG	4 cut(s)	1409, 1553, 1874, 2118
MaeII	ACGT	4 cut(s)	180, 247, 1001, 1846
MaeIII	GTNAC	4 cut(s)	176, 277, 1411, 2050
MflI	RGATCY	1 cut(s)	868
MlsI	TGGCCA	2 cut(s)	1463, 1698
MluNI	TGGCCA	2 cut(s)	1463, 1698
MlyI	GAGTC	3 cut(s)	469, 786, 1029
MmeI	TCCRAC	5 cut(s)	152, 234, 313, 628, 663
Mox20I	TGGCCA	2 cut(s)	1463, 1698
MroI	TCCGGA	1 cut(s)	1297
MroXI	GAANNNNTTC	1 cut(s)	1509
MscI	TGGCCA	2 cut(s)	1463, 1698
MslI	CAYNNNNRTG	4 cut(s)	273, 802, 1469, 2048
Msp20I	TGGCCA	2 cut(s)	1463, 1698
MspA1I	CMGCKG	1 cut(s)	926
MspI	CCGG	2 cut(s)	1298, 2245
MspR9I	CCNGG	5 cut(s)	415, 608, 735, 1014, 2071
Mva1269I	GAATGC	1 cut(s)	2260
MvaI	CCWGG	5 cut(s)	415, 608, 735, 1014, 2071
MvnI	CGCG	1 cut(s)	914
MwoI	GCNNNNNNNGC	3 cut(s)	545, 2213, 2267
NcoI	CCATGG	1 cut(s)	1699
NdeI	CATATG	1 cut(s)	445
NlaIII	CATG	9 cut(s)	801, 1056, 1085, 1370, 1462, 1566, 1703, 1780, 2047
NlaIV	GGNNCC	3 cut(s)	732, 1332, 1879
NmeAIII	GCCGAG	1 cut(s)	470
NmuCI	GTSAC	2 cut(s)	176, 2050
NspI	RCATGY	1 cut(s)	1370
NspV	TTCGAA	1 cut(s)	2189
PaeR7I	CTCGAG	1 cut(s)	1812
PciI	ACATGT	1 cut(s)	1366
PciSI	GCTCTTC	1 cut(s)	1974
PcsI	WCGNNNNNNNCGW	1 cut(s)	2121
PctI	GAATGC	1 cut(s)	2260
PdmI	GAANNNNTTC	1 cut(s)	1509
PfeI	GAWTC	2 cut(s)	632, 919
PflFI	GACNNNGTC	1 cut(s)	1264
PkrI	GCNGC	3 cut(s)	2163, 2177, 2260
PleI	GAGTC	3 cut(s)	469, 786, 1028
PpsI	GAGTC	3 cut(s)	469, 786, 1028
Ppu21I	YACGTR	1 cut(s)	1002
PpuMI	RGGWCCY	2 cut(s)	730, 1877
PscI	ACATGT	1 cut(s)	1366
PshBI	ATTAAT	1 cut(s)	1988
Psp5II	RGGWCCY	2 cut(s)	730, 1877
Psp6I	CCWGG	5 cut(s)	413, 606, 733, 1012, 2069
PspFI	CCCAGC	1 cut(s)	202
PspGI	CCWGG	5 cut(s)	413, 606, 733, 1012, 2069
PspN4I	GGNNCC	3 cut(s)	732, 1332, 1879
PspPI	GGNCC	4 cut(s)	604, 730, 1010, 1877
PspPPI	RGGWCCY	2 cut(s)	730, 1877
PspXI	VCTCGAGB	1 cut(s)	1812
PstNI	CAGNNNCTG	1 cut(s)	1013
PsuI	RGATCY	1 cut(s)	868
PsyI	GACNNNGTC	1 cut(s)	1264
RsaI	GTAC	8 cut(s)	321, 739, 1092, 1365, 1371, 1706, 2137, 2333
RsaNI	GTAC	8 cut(s)	320, 738, 1091, 1364, 1370, 1705, 2136, 2332
RseI	CAYNNNNRTG	4 cut(s)	273, 802, 1469, 2048
SalI	GTCGAC	1 cut(s)	2240
SapI	GCTCTTC	1 cut(s)	1974
SatI	GCNGC	3 cut(s)	2162, 2176, 2259
Sau96I	GGNCC	4 cut(s)	604, 730, 1010, 1877
SchI	GAGTC	3 cut(s)	469, 786, 1029
ScrFI	CCNGG	5 cut(s)	415, 608, 735, 1014, 2071
SfaNI	GCATC	1 cut(s)	1748
Sfr274I	CTCGAG	1 cut(s)	1812
SfuI	TTCGAA	1 cut(s)	2189
SinI	GGWCC	3 cut(s)	604, 730, 1877
SlaI	CTCGAG	1 cut(s)	1812
SmiMI	CAYNNNNRTG	4 cut(s)	273, 802, 1469, 2048
SmlI	CTYRAG	3 cut(s)	1812, 2153, 2249
SmoI	CTYRAG	3 cut(s)	1812, 2153, 2249
SsiI	CCGC	4 cut(s)	55, 926, 1589, 1899
SspI	AATATT	2 cut(s)	1602, 1969
SspMI	CTAG	4 cut(s)	1409, 1553, 1874, 2118
StyD4I	CCNGG	5 cut(s)	413, 606, 733, 1012, 2069
StyI	CCWWGG	2 cut(s)	1086, 1699
TaaI	ACNGT	4 cut(s)	324, 389, 1264, 1886
TaiI	ACGT	4 cut(s)	183, 250, 1004, 1849
TaqI	TCGA	5 cut(s)	310, 1153, 1813, 2189, 2241
TatI	WGTACW	4 cut(s)	1363, 1369, 2135, 2331
TfiI	GAWTC	2 cut(s)	632, 919
TscAI	CASTG	3 cut(s)	586, 1269, 2104
TseFI	GTSAC	2 cut(s)	176, 2050
TseI	GCWGC	3 cut(s)	2161, 2175, 2258
Tsp45I	GTSAC	2 cut(s)	176, 2050
TspDTI	ATGAA	5 cut(s)	891, 1289, 1416, 2214, 2280
TspGWI	ACGGA	1 cut(s)	959
TspRI	CASTG	3 cut(s)	586, 1269, 2104
Tth111I	GACNNNGTC	1 cut(s)	1264
VpaK11BI	GGWCC	3 cut(s)	604, 730, 1877
VspI	ATTAAT	1 cut(s)	1988
XapI	RAATTY	7 cut(s)	529, 574, 747, 821, 879, 1293, 1648
XceI	RCATGY	1 cut(s)	1370
XcmI	CCANNNNNNNNNTGG	1 cut(s)	113
XhoI	CTCGAG	1 cut(s)	1812
XmiI	GTMKAC	2 cut(s)	1664, 2241
XmnI	GAANNNNTTC	1 cut(s)	1509
XspI	CTAG	4 cut(s)	1409, 1553, 1874, 2118
ZraI	GACGTC	2 cut(s)	181, 248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.