Rh7AG025400

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
1681135 .. 1681749
615 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG025400.1

Sequence Viewer

Length: 327 bp
ATGAAGAAGTTTGAAGAAGCAGGCATCAAGGAATTGAAGCGACAGTGCAATAGTATGGGATGCAGTCTGAAACAAGGCCAAGAGCAGGAAATCCTAACTTTTATGATTTCATTCTTTACCATACAAAGATTCAGAGTTGATCACGAATATCGGATGAAAAGGTGCATTGAATTTTTCATGTCACGTGTCAAAGGTTATATTTCTAGGTCTTGCACCCTCGACGACTTGGAAACTGTGAAAAAAGCCGTTGAAAGTGTGAAGAAGGAGAGGGAGGCTGATGCTGATCAAGTTCATCAACTGGTAATGCAGAAACCCTTTTCGGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

108

Amino Acids

12.81

Weight (kDa)

8.7

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 170
AcvI CACGTG 1 cut(s) 185
AfiI CCNNNNNNNGG 1 cut(s) 85
AflIII ACRYGT 1 cut(s) 184
AgsI TTSAA 4 cut(s) 14, 37, 170, 251
AoxI GGCC 1 cut(s) 76
ApoI RAATTY 1 cut(s) 170
BbrPI CACGTG 1 cut(s) 185
BceAI ACGGC 1 cut(s) 230
BclI TGATCA 2 cut(s) 139, 283
BfaI CTAG 1 cut(s) 204
BmsI GCATC 3 cut(s) 33, 50, 268
BsaAI YACGTR 1 cut(s) 185
BsaBI GATNNNNATC 1 cut(s) 282
Bsc4I CCNNNNNNNGG 1 cut(s) 85
Bse1I ACTGG 1 cut(s) 303
Bse8I GATNNNNATC 1 cut(s) 282
BseGI GGATG 2 cut(s) 65, 159
BseJI GATNNNNATC 1 cut(s) 282
BseLI CCNNNNNNNGG 1 cut(s) 85
BseNI ACTGG 1 cut(s) 303
BshFI GGCC 1 cut(s) 78
BslI CCNNNNNNNGG 1 cut(s) 85
BsnI GGCC 1 cut(s) 78
Bsp143I GATC 2 cut(s) 139, 283
BspANI GGCC 1 cut(s) 78
BsrI ACTGG 1 cut(s) 303
BssMI GATC 2 cut(s) 139, 283
Bst4CI ACNGT 2 cut(s) 45, 235
BstBAI YACGTR 1 cut(s) 185
BstC8I GCNNGC 1 cut(s) 22
BstF5I GGATG 2 cut(s) 65, 159
BstKTI GATC 2 cut(s) 142, 286
BstMBI GATC 2 cut(s) 139, 283
BsuRI GGCC 1 cut(s) 78
BtsCI GGATG 2 cut(s) 65, 159
BtsIMutI CAGTG 1 cut(s) 50
Cac8I GCNNGC 1 cut(s) 22
CviAII CATG 1 cut(s) 178
CviJI RGCY 3 cut(s) 78, 245, 275
CviKI_1 RGCY 3 cut(s) 78, 245, 275
DpnI GATC 2 cut(s) 141, 285
DpnII GATC 2 cut(s) 139, 283
Eco72I CACGTG 1 cut(s) 185
FaeI CATG 1 cut(s) 181
FaiI YATR 5 cut(s) 56, 104, 122, 179, 198
FatI CATG 1 cut(s) 177
FbaI TGATCA 2 cut(s) 139, 283
FokI GGATG 2 cut(s) 72, 166
FspBI CTAG 1 cut(s) 204
HaeIII GGCC 1 cut(s) 78
Hin1II CATG 1 cut(s) 181
HinfI GANTC 1 cut(s) 129
Hpy188I TCNGA 4 cut(s) 69, 134, 153, 322
Hpy188III TCNNGA 1 cut(s) 143
Hpy99I CGWCG 1 cut(s) 224
HpyAV CCTTC 1 cut(s) 256
HpyCH4III ACNGT 2 cut(s) 45, 235
HpyCH4IV ACGT 1 cut(s) 184
HpyCH4V TGCA 5 cut(s) 48, 63, 165, 213, 307
HpySE526I ACGT 1 cut(s) 184
Hsp92II CATG 1 cut(s) 181
Ksp22I TGATCA 2 cut(s) 139, 283
Kzo9I GATC 2 cut(s) 139, 283
LpnPI CCDG 3 cut(s) 6, 71, 284
LweI GCATC 3 cut(s) 33, 50, 268
MaeI CTAG 1 cut(s) 204
MaeII ACGT 1 cut(s) 184
MaeIII GTNAC 1 cut(s) 180
MalI GATC 2 cut(s) 141, 285
MboI GATC 2 cut(s) 139, 283
MboII GAAGA 3 cut(s) 16, 26, 271
MluCI AATT 2 cut(s) 32, 170
MnlI CCTC 3 cut(s) 227, 261, 265
NdeII GATC 2 cut(s) 139, 283
NlaIII CATG 1 cut(s) 181
NmuCI GTSAC 1 cut(s) 180
PfeI GAWTC 1 cut(s) 129
PmaCI CACGTG 1 cut(s) 185
PmlI CACGTG 1 cut(s) 185
Ppu21I YACGTR 1 cut(s) 185
PspCI CACGTG 1 cut(s) 185
Sau3AI GATC 2 cut(s) 139, 283
SetI ASST 4 cut(s) 164, 187, 196, 209
SfaNI GCATC 3 cut(s) 33, 50, 268
Sse9I AATT 2 cut(s) 32, 170
SspMI CTAG 1 cut(s) 204
TaaI ACNGT 2 cut(s) 45, 235
TaiI ACGT 1 cut(s) 187
TaqI TCGA 1 cut(s) 219
TasI AATT 2 cut(s) 32, 170
TfiI GAWTC 1 cut(s) 129
TscAI CASTG 1 cut(s) 50
TseFI GTSAC 1 cut(s) 180
Tsp45I GTSAC 1 cut(s) 180
TspDTI ATGAA 5 cut(s) 17, 99, 166, 170, 281
TspRI CASTG 1 cut(s) 50
XapI RAATTY 1 cut(s) 170
XspI CTAG 1 cut(s) 204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.