Rh7CG026600

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
1949267 .. 1949712
446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG026600.1

Sequence Viewer

Length: 435 bp
ATGACATACTCAGTAAGAAACCCTCCTGCGAAGAGCAAATATACCCTTCAAATCTGCTATGGTGGACACTTTGAAACCGAGAGTGATCCCACTTACCAAAACTACCAAAACTATACAGGAGAAGGAGTGATCTGGGTTGAAAATCTTGATTATTCGAGAAGGGCTTGTTTGAGTGTTGTCAATGATCTTGCACATAAGCTGGGCTACCGAAATACTCCAGAAATATATATTTGGCATAAAGGACGTCCGTTGAAAATTACTTCTCACGATGATGTAACAGAAACGATTAGTCAATTGGGAGCTAATCGAGAGTTGATAATGTATATTGTTGGGGATAGAGAAGAGGAAGCACTGGAACAAAATCCCACAATTTTATCTTGGAATTGTCGTGGACTCAACCATAGCTATGTTGAGGGTTCTTATTCTTATCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

144

Amino Acids

16.66

Weight (kDa)

5.48

Isoelectric Point (pI)

37.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 247
AclWI GGATC 1 cut(s) 80
AcyI GRCGYC 1 cut(s) 244
AgsI TTSAA 4 cut(s) 50, 74, 140, 253
AluBI AGCT 3 cut(s) 199, 302, 405
AluI AGCT 3 cut(s) 199, 302, 405
AlwI GGATC 1 cut(s) 80
BpmI CTGGAG 1 cut(s) 201
BsaHI GRCGYC 1 cut(s) 244
BsaXI ACNNNNNCTCC 2 cut(s) 111, 141
Bse1I ACTGG 1 cut(s) 357
BseMII CTCAG 1 cut(s) 24
BseNI ACTGG 1 cut(s) 357
BseYI CCCAGC 1 cut(s) 199
Bsp143I GATC 3 cut(s) 85, 129, 184
BspCNI CTCAG 1 cut(s) 23
BspPI GGATC 1 cut(s) 80
BspQI GCTCTTC 1 cut(s) 26
BsrI ACTGG 1 cut(s) 357
BssMI GATC 3 cut(s) 85, 129, 184
BssNI GRCGYC 1 cut(s) 244
Bst6I CTCTTC 2 cut(s) 26, 336
BstACI GRCGYC 1 cut(s) 244
BstDEI CTNAG 1 cut(s) 10
BstKTI GATC 3 cut(s) 88, 132, 187
BstMBI GATC 3 cut(s) 85, 129, 184
BtsIMutI CAGTG 1 cut(s) 350
CviJI RGCY 5 cut(s) 164, 199, 204, 302, 405
CviKI_1 RGCY 5 cut(s) 164, 199, 204, 302, 405
DdeI CTNAG 1 cut(s) 10
DpnI GATC 3 cut(s) 87, 131, 186
DpnII GATC 3 cut(s) 85, 129, 184
Eam1104I CTCTTC 2 cut(s) 26, 336
EarI CTCTTC 2 cut(s) 26, 336
GsaI CCCAGC 1 cut(s) 203
GsuI CTGGAG 1 cut(s) 201
Hin1I GRCGYC 1 cut(s) 244
HinfI GANTC 1 cut(s) 393
Hpy166II GTNNAC 2 cut(s) 65, 392
Hpy188III TCNNGA 5 cut(s) 146, 156, 218, 266, 308
Hpy8I GTNNAC 2 cut(s) 65, 392
HpyAV CCTTC 3 cut(s) 56, 116, 153
HpyCH4IV ACGT 1 cut(s) 244
HpyCH4V TGCA 1 cut(s) 191
HpyF3I CTNAG 1 cut(s) 10
HpySE526I ACGT 1 cut(s) 244
Hsp92I GRCGYC 1 cut(s) 244
Kzo9I GATC 3 cut(s) 85, 129, 184
LguI GCTCTTC 1 cut(s) 26
LmnI GCTCC 1 cut(s) 299
LpnPI CCDG 6 cut(s) 39, 102, 118, 185, 231, 338
MaeII ACGT 1 cut(s) 244
MaeIII GTNAC 1 cut(s) 274
MalI GATC 3 cut(s) 87, 131, 186
MboI GATC 3 cut(s) 85, 129, 184
MboII GAAGA 2 cut(s) 43, 353
MfeI CAATTG 1 cut(s) 293
MluCI AATT 4 cut(s) 255, 293, 369, 382
MlyI GAGTC 1 cut(s) 387
MnlI CCTC 3 cut(s) 33, 337, 406
MslI CAYNNNNRTG 2 cut(s) 270, 405
MunI CAATTG 1 cut(s) 293
NdeII GATC 3 cut(s) 85, 129, 184
PciSI GCTCTTC 1 cut(s) 26
PleI GAGTC 1 cut(s) 387
PpsI GAGTC 1 cut(s) 387
PspFI CCCAGC 1 cut(s) 199
RseI CAYNNNNRTG 2 cut(s) 270, 405
SapI GCTCTTC 1 cut(s) 26
Sau3AI GATC 3 cut(s) 85, 129, 184
SchI GAGTC 1 cut(s) 387
SetI ASST 4 cut(s) 201, 247, 304, 407
SmiMI CAYNNNNRTG 2 cut(s) 270, 405
Sse9I AATT 4 cut(s) 255, 293, 369, 382
TaiI ACGT 1 cut(s) 247
TaqI TCGA 2 cut(s) 155, 307
TasI AATT 4 cut(s) 255, 293, 369, 382
TscAI CASTG 1 cut(s) 357
TspGWI ACGGA 1 cut(s) 237
TspRI CASTG 1 cut(s) 357
ZraI GACGTC 1 cut(s) 245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.