Rmu_sc0010928.1_g000012

Cysteine synthase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010928.1
Physical Location & Seq
Forward (+)
57961 .. 60395
2435 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010928.1_g000012.1.cds

Sequence Viewer

Length: 888 bp
atggagggccaatgtgcaatcaagaaagatgtcactgaattaatcggaaataccccaatggtatacctgaacaatgttgtggaaggttgtgtagctcgaattgctgccaagctcgagatgatggaaccctgctgtagtgtgaaagacaggattgcatatagtatgatcaaggatgcagaagataaaggtctaataactccggggaagactgttctcattgagcccacaagtggaaacactggcattggattggcattcatcgcagcaagcaagggttacaagttgaagttagtcatgccatctgtaatgagtcttgaaaaaagaattgtgctcttagcttttggagctgaggtttacctcacagattgggccaaaggctttaagggaagtcttgataaggttgaggagttgctacgtgacacacctaatagtcatacgcttcagcaatttgaaaaccctgccaatccaaagattcattatgaaaccactggcccggagatatggagagactcggctgggaaagttgatatcttggtttcggggataggaactggtggtacagtaactggtgtagggaagtttcttaaagagcaaaatccagagatcaaggttgaattttgtgtattgtatgtttacggtgtagaaccaattgagagtgcagtcttgaatggtggtccacctgggaagcatctgatccaaggacttggtgctggcatcatacctcaagtgctcgatgttaacctgccggataaagttattacagtggggatctcatctggtgctgcagcagcggtagcaataaagttggcaaagaagcaggaaaatgctggaaaactaatagttgcaagtcttctttaccattcaattgttcatggcattagttattaa

Protein Analysis

295

Amino Acids

31.46

Weight (kDa)

6.54

Isoelectric Point (pI)

14.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000373)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04940 AT3G04940 AT5G28020 AT5G28020 AT5G28020 AT5G28020 AT5G28020 AT5G28020 AT5G28030 AT5G28030 AT5G28030 AT5G28030 AT5G28030
fragaria_vesca FvH4_6g03790 FvH4_6g03790 FvH4_6g03790 FvH4_6g03790 FvH4_6g03790 FvH4_6g03790 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830
malus_domestica MD04G1218200.v1.1 MD04G1218300.v1.1 MD04G1218500.v1.1 MD12G1235500.v1.1
prunus_persica Prupe.6G338100_v2.0.a1 Prupe.6G338100_v2.0.a1 Prupe.6G338100_v2.0.a1 Prupe.6G338100_v2.0.a1
pyrus_communis pycom04g19410 pycom04g19420
rosa_chinensis RchiOBHm_Chr3g0452261 RchiOBHm_Chr3g0452281 RchiOBHm_Chr3g0452291 RchiOBHm_Chr3g0452301 RchiOBHm_Chr3g0452341 RchiOBHm_Chr3g0452361 RchiOBHm_Chr3g0452371 RchiOBHm_Chr3g0452381 RchiOBHm_Chr3g0452931
rosa_laevigata RLG00000025606 RLG00000025607 RLG00000025609 RLG00000025610 RLG00000025612 RLG00000025613
rosa_multiflora Rmu_sc0002823.1_g000002 Rmu_sc0010928.1_g000005 Rmu_sc0010928.1_g000006 Rmu_sc0010928.1_g000011 Rmu_sc0010928.1_g000012 Rmu_sc0010928.1_g000015 Rmu_sc0011680.1_g000012 Rmu_sc0011680.1_g000014 Rmu_sc0011680.1_g000015
rosa_roxburghii Rroxscaffold_6G00429380 Rroxscaffold_6G00429390 Rroxscaffold_6G00429400 Rroxscaffold_6G00429410 Rroxscaffold_6G00429420
rosa_rugosa Rorug02G0639700 Rorug02G0639800 Rorug02G0639900 Rorug02G0639900 Rorug02G0639900 Rorug02G0640000 Rorug02G0640000 Rorug02G0640100 Rorug02G0640200 Rorug02G0640300 Rorug02G0640300 Rorug02G0640300 Rorug02G0640300 Rorug02G0640400 Rorug02G0643700
rosa_samantha Rh3AG041800 Rh3AG042100 Rh3AG042200 Rh3AG046700 Rh3BG043400 Rh3CG041800 Rh3DG042700 Rh3DG042800 Rh3DG043100 Rh3DG043200 Rh3DG048700
rosa_wichuraiana Rw3G003180 Rw3G003190 Rw3G003200 Rw3G003220 Rw3G003230 Rw3G003240 Rw3G003660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 750
AccI GTMKAC 1 cut(s) 63
AciI CCGC 1 cut(s) 791
AclWI GGATC 2 cut(s) 688, 776
AcsI RAATTY 1 cut(s) 614
AcuI CTGAAG 1 cut(s) 425
AfaI GTAC 1 cut(s) 559
AfiI CCNNNNNNNGG 1 cut(s) 230
AgsI TTSAA 6 cut(s) 286, 317, 452, 614, 667, 864
AjnI CCWGG 1 cut(s) 679
AluBI AGCT 4 cut(s) 95, 112, 338, 347
AluI AGCT 4 cut(s) 95, 112, 338, 347
Alw21I GWGCWC 2 cut(s) 333, 732
Alw26I GTCTC 1 cut(s) 501
AlwI GGATC 2 cut(s) 688, 776
AlwNI CAGNNNCTG 1 cut(s) 566
Ama87I CYCGRG 1 cut(s) 113
AoxI GGCC 3 cut(s) 7, 369, 490
ApeKI GCWGC 5 cut(s) 104, 263, 782, 785, 788
ApoI RAATTY 1 cut(s) 614
AseI ATTAAT 1 cut(s) 41
AspS9I GGNCC 4 cut(s) 7, 369, 491, 674
AsuC2I CCSGG 2 cut(s) 201, 494
AvaI CYCGRG 1 cut(s) 113
AvaII GGWCC 1 cut(s) 674
BanII GRGCYC 1 cut(s) 225
BbsI GAAGAC 2 cut(s) 212, 842
Bbv12I GWGCWC 2 cut(s) 333, 732
BbvCI CCTCAGC 1 cut(s) 348
BbvI GCAGC 5 cut(s) 91, 275, 769, 797, 800
BccI CCATC 2 cut(s) 115, 307
BciT130I CCWGG 1 cut(s) 681
BclI TGATCA 1 cut(s) 165
BcnI CCSGG 2 cut(s) 201, 494
BcoDI GTCTC 1 cut(s) 501
BfmI CTRYAG 2 cut(s) 133, 783
BfuAI ACCTGC 1 cut(s) 750
BisI GCNGC 5 cut(s) 105, 264, 783, 786, 789
BlsI GCNGC 5 cut(s) 106, 265, 784, 787, 790
Bme1390I CCNGG 3 cut(s) 201, 494, 681
Bme18I GGWCC 1 cut(s) 674
BmeT110I CYCGRG 1 cut(s) 113
BmgT120I GGNCC 4 cut(s) 7, 369, 491, 674
BmiI GGNNCC 1 cut(s) 126
BmrFI CCNGG 3 cut(s) 201, 494, 681
BmsI GCATC 3 cut(s) 163, 697, 723
BpiI GAAGAC 2 cut(s) 212, 842
Bpu10I CCTNAGC 1 cut(s) 348
BpuEI CTTGAG 1 cut(s) 708
BpuMI CCSGG 2 cut(s) 201, 494
BsaAI YACGTR 1 cut(s) 416
BsaJI CCNNGG 3 cut(s) 200, 680, 697
BsaXI ACNNNNNCTCC 2 cut(s) 336, 366
Bsc4I CCNNNNNNNGG 1 cut(s) 230
Bse1I ACTGG 4 cut(s) 244, 493, 556, 571
BseBI CCWGG 1 cut(s) 681
BseDI CCNNGG 3 cut(s) 200, 680, 697
BseGI GGATG 1 cut(s) 178
BseLI CCNNNNNNNGG 1 cut(s) 230
BseMII CTCAG 1 cut(s) 339
BseNI ACTGG 4 cut(s) 244, 493, 556, 571
BseRI GAGGAG 1 cut(s) 419
BseXI GCAGC 5 cut(s) 91, 275, 769, 797, 800
BseYI CCCAGC 1 cut(s) 515
BsgI GTGCAG 1 cut(s) 678
BshFI GGCC 3 cut(s) 9, 371, 492
BsiHKAI GWGCWC 2 cut(s) 333, 732
BsiHKCI CYCGRG 1 cut(s) 113
BsiSI CCGG 3 cut(s) 200, 494, 746
BslI CCNNNNNNNGG 1 cut(s) 230
BsmAI GTCTC 1 cut(s) 501
BsmI GAATGC 1 cut(s) 254
BsnI GGCC 3 cut(s) 9, 371, 492
BsoBI CYCGRG 1 cut(s) 113
Bsp1286I GDGCHC 3 cut(s) 225, 333, 732
Bsp143I GATC 4 cut(s) 165, 603, 693, 768
BspACI CCGC 1 cut(s) 791
BspANI GGCC 3 cut(s) 9, 371, 492
BspCNI CTCAG 1 cut(s) 340
BspLI GGNNCC 1 cut(s) 126
BspMAI CTGCAG 1 cut(s) 787
BspMI ACCTGC 1 cut(s) 750
BspPI GGATC 2 cut(s) 688, 776
BsrI ACTGG 4 cut(s) 244, 493, 556, 571
BssECI CCNNGG 3 cut(s) 200, 680, 697
BssMI GATC 4 cut(s) 165, 603, 693, 768
BssNAI GTATAC 1 cut(s) 64
BssT1I CCWWGG 1 cut(s) 697
Bst1107I GTATAC 1 cut(s) 64
Bst2UI CCWGG 1 cut(s) 681
Bst4CI ACNGT 4 cut(s) 211, 562, 638, 763
BstBAI YACGTR 1 cut(s) 416
BstC8I GCNNGC 2 cut(s) 268, 712
BstDEI CTNAG 2 cut(s) 334, 348
BstF5I GGATG 1 cut(s) 178
BstKTI GATC 4 cut(s) 168, 606, 696, 771
BstMAI GTCTC 1 cut(s) 501
BstMBI GATC 4 cut(s) 165, 603, 693, 768
BstMWI GCNNNNNNNGC 5 cut(s) 101, 260, 344, 788, 794
BstNI CCWGG 1 cut(s) 681
BstSCI CCNGG 3 cut(s) 199, 492, 679
BstSFI CTRYAG 2 cut(s) 133, 783
BstV1I GCAGC 5 cut(s) 91, 275, 769, 797, 800
BstV2I GAAGAC 2 cut(s) 212, 842
BstX2I RGATCY 1 cut(s) 768
BstXI CCANNNNNNTGG 1 cut(s) 704
BstYI RGATCY 1 cut(s) 768
BstZ17I GTATAC 1 cut(s) 64
BsuRI GGCC 3 cut(s) 9, 371, 492
BtgZI GCGATG 1 cut(s) 244
BtsCI GGATG 1 cut(s) 178
BtsIMutI CAGTG 4 cut(s) 33, 237, 486, 768
BveI ACCTGC 1 cut(s) 750
Cac8I GCNNGC 2 cut(s) 268, 712
CaiI CAGNNNCTG 1 cut(s) 566
Cfr13I GGNCC 4 cut(s) 7, 369, 491, 674
Csp6I GTAC 1 cut(s) 558
CviAII CATG 2 cut(s) 295, 872
CviQI GTAC 1 cut(s) 558
DdeI CTNAG 2 cut(s) 334, 348
DpnI GATC 4 cut(s) 167, 605, 695, 770
DpnII GATC 4 cut(s) 165, 603, 693, 768
Eco130I CCWWGG 1 cut(s) 697
Eco24I GRGCYC 1 cut(s) 225
Eco32I GATATC 1 cut(s) 529
Eco47I GGWCC 1 cut(s) 674
Eco57I CTGAAG 1 cut(s) 425
Eco88I CYCGRG 1 cut(s) 113
EcoRII CCWGG 1 cut(s) 679
EcoRV GATATC 1 cut(s) 529
EcoT14I CCWWGG 1 cut(s) 697
EcoT38I GRGCYC 1 cut(s) 225
ErhI CCWWGG 1 cut(s) 697
FaeI CATG 2 cut(s) 298, 875
FatI CATG 2 cut(s) 294, 871
FbaI TGATCA 1 cut(s) 165
FblI GTMKAC 1 cut(s) 63
Fnu4HI GCNGC 5 cut(s) 105, 264, 783, 786, 789
FokI GGATG 1 cut(s) 185
FriOI GRGCYC 1 cut(s) 225
Fsp4HI GCNGC 5 cut(s) 105, 264, 783, 786, 789
GluI GCNGC 5 cut(s) 105, 264, 783, 786, 789
GsaI CCCAGC 1 cut(s) 519
HaeIII GGCC 3 cut(s) 9, 371, 492
HapII CCGG 3 cut(s) 200, 494, 746
Hin1II CATG 2 cut(s) 298, 875
HincII GTYRAC 1 cut(s) 739
HindII GTYRAC 1 cut(s) 739
HinfI GANTC 3 cut(s) 310, 472, 509
HpaI GTTAAC 1 cut(s) 739
HpaII CCGG 3 cut(s) 200, 494, 746
Hpy166II GTNNAC 5 cut(s) 64, 355, 634, 677, 739
Hpy188I TCNGA 2 cut(s) 47, 693
Hpy188III TCNNGA 6 cut(s) 22, 115, 314, 392, 599, 664
Hpy8I GTNNAC 5 cut(s) 64, 355, 634, 677, 739
HpyAV CCTTC 1 cut(s) 77
HpyCH4III ACNGT 4 cut(s) 211, 562, 638, 763
HpyCH4IV ACGT 1 cut(s) 415
HpyCH4V TGCA 6 cut(s) 17, 155, 176, 659, 785, 845
HpyF10VI GCNNNNNNNGC 5 cut(s) 101, 260, 344, 788, 794
HpyF3I CTNAG 2 cut(s) 334, 348
HpySE526I ACGT 1 cut(s) 415
Hsp92II CATG 2 cut(s) 298, 875
Ksp22I TGATCA 1 cut(s) 165
KspAI GTTAAC 1 cut(s) 739
Kzo9I GATC 4 cut(s) 165, 603, 693, 768
LmnI GCTCC 1 cut(s) 344
Lsp1109I GCAGC 5 cut(s) 91, 275, 769, 797, 800
LweI GCATC 3 cut(s) 163, 697, 723
MaeII ACGT 1 cut(s) 415
MaeIII GTNAC 4 cut(s) 31, 275, 416, 562
MalI GATC 4 cut(s) 167, 605, 695, 770
MboI GATC 4 cut(s) 165, 603, 693, 768
MboII GAAGA 3 cut(s) 191, 217, 842
MfeI CAATTG 2 cut(s) 648, 864
MflI RGATCY 1 cut(s) 768
MhlI GDGCHC 3 cut(s) 225, 333, 732
MluCI AATT 7 cut(s) 38, 99, 324, 446, 614, 648, 864
MlyI GAGTC 2 cut(s) 319, 503
MnlI CCTC 4 cut(s) 343, 368, 397, 732
MseI TTAA 5 cut(s) 41, 381, 585, 738, 886
MspA1I CMGCKG 1 cut(s) 791
MspI CCGG 3 cut(s) 200, 494, 746
MspR9I CCNGG 3 cut(s) 201, 494, 681
MunI CAATTG 2 cut(s) 648, 864
Mva1269I GAATGC 1 cut(s) 254
MvaI CCWGG 1 cut(s) 681
MwoI GCNNNNNNNGC 5 cut(s) 101, 260, 344, 788, 794
NciI CCSGG 2 cut(s) 201, 494
NdeII GATC 4 cut(s) 165, 603, 693, 768
NlaIII CATG 2 cut(s) 298, 875
NlaIV GGNNCC 1 cut(s) 126
NmeAIII GCCGAG 1 cut(s) 491
NmuCI GTSAC 2 cut(s) 31, 416
PaeR7I CTCGAG 1 cut(s) 113
PctI GAATGC 1 cut(s) 254
PfeI GAWTC 1 cut(s) 472
PkrI GCNGC 5 cut(s) 106, 265, 784, 787, 790
PleI GAGTC 2 cut(s) 318, 503
PpsI GAGTC 2 cut(s) 318, 503
Ppu21I YACGTR 1 cut(s) 416
PshBI ATTAAT 1 cut(s) 41
Psp6I CCWGG 1 cut(s) 679
PspFI CCCAGC 1 cut(s) 515
PspGI CCWGG 1 cut(s) 679
PspN4I GGNNCC 1 cut(s) 126
PspPI GGNCC 4 cut(s) 7, 369, 491, 674
PsrI GAACNNNNNNTAC 2 cut(s) 541, 573
PstI CTGCAG 1 cut(s) 787
PstNI CAGNNNCTG 1 cut(s) 566
PsuI RGATCY 1 cut(s) 768
RsaI GTAC 1 cut(s) 559
RsaNI GTAC 1 cut(s) 558
SaqAI TTAA 5 cut(s) 41, 381, 585, 738, 886
SatI GCNGC 5 cut(s) 105, 264, 783, 786, 789
Sau3AI GATC 4 cut(s) 165, 603, 693, 768
Sau96I GGNCC 4 cut(s) 7, 369, 491, 674
SchI GAGTC 2 cut(s) 319, 503
ScrFI CCNGG 3 cut(s) 201, 494, 681
SduI GDGCHC 3 cut(s) 225, 333, 732
SfaNI GCATC 3 cut(s) 163, 697, 723
SfcI CTRYAG 2 cut(s) 133, 783
Sfr274I CTCGAG 1 cut(s) 113
SinI GGWCC 1 cut(s) 674
SlaI CTCGAG 1 cut(s) 113
SmlI CTYRAG 2 cut(s) 113, 723
SmoI CTYRAG 2 cut(s) 113, 723
Sse9I AATT 7 cut(s) 38, 99, 324, 446, 614, 648, 864
SsiI CCGC 1 cut(s) 791
StyD4I CCNGG 3 cut(s) 199, 492, 679
StyI CCWWGG 1 cut(s) 697
TaaI ACNGT 4 cut(s) 211, 562, 638, 763
TaiI ACGT 1 cut(s) 418
TaqI TCGA 3 cut(s) 97, 114, 732
TasI AATT 7 cut(s) 38, 99, 324, 446, 614, 648, 864
TfiI GAWTC 1 cut(s) 472
Tru1I TTAA 5 cut(s) 41, 381, 585, 738, 886
Tru9I TTAA 5 cut(s) 41, 381, 585, 738, 886
TscAI CASTG 4 cut(s) 40, 244, 493, 768
TseFI GTSAC 2 cut(s) 31, 416
TseI GCWGC 5 cut(s) 104, 263, 782, 785, 788
Tsp45I GTSAC 2 cut(s) 31, 416
TspDTI ATGAA 4 cut(s) 247, 464, 495, 860
TspRI CASTG 4 cut(s) 40, 244, 493, 768
VpaK11BI GGWCC 1 cut(s) 674
VspI ATTAAT 1 cut(s) 41
XapI RAATTY 1 cut(s) 614
XhoI CTCGAG 1 cut(s) 113
XmiI GTMKAC 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.