Rorug02G0640000

Belongs to the cysteine synthase cystathionine beta- synthase family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
75233401 .. 75237959
4559 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0640000.1

Sequence Viewer

Length: 2253 bp
ATGACAGTTTTCTCCGGCAAACAGGTGTTCCCGGTGGACTGCGAGGCCGAGGTTTCGCAGCGCCTTCTGGAAGCCTCGCTCGCCGGAGATCTGAAGTCGGCGATGGACTGCGCCGCCGATCCTTTCGTCGACGTCAACTTCGTCGGCGCCGTGTGCCTGAAATGCAGGAGGACTGAGGTGGTGCTGCGGGACGAATCGGCCAGCGAAGTCCGAGTCGGTTACGAGGAGTTCAAAACTGACGTCACGGCTCTCTTCGTCGCCGTTCATGGTGGAAATGTTGAATTGGTGAAGAAATTGCTGAGCATTGGAGCTGATGTAAATCAGAAGCTCTTCCGTGGCTTCGCGACAACAGCAGCAGTGAGAGAGGGCCATCTTGGGATTCTCGAGATCCTACTTAAAGCTGGAGCATCTCAACCAGCTTGTGAGGAAGCTCTGTTGGAGGCAAGTTGTCATGGAAATGCTAAAAACGTGGAGCTGCTCATGTCCTCTGACTTGATCCGCCCCCATCTTGCTGTACATGCCATTGTCATAGCATGCTGCAGGGGGTTTGTGGATGTGGTTGACACTCTCATGAAGTGTGGTGTCGATGCAAGTGCAGTCGATAGGATACTGCTTCAGTCATCTAAGCCTTCTCTGCACACCAATGTCGACTGTAGTGCACTGGTAGCTGCAGTTGTTAGCAGGCAGGTTGCTACTGTCCGTTTGCTGCTAAAGGCTGGTGCAAGGACAGATGTCCAAGTGAGGCTGGGAGCATGGTCATGGGACATAGCTACAGGGGAAGAGTTGCGCGTTGGTGCAGGACTGGCTGAACCTTATCCCATTACTTGGTGTGCAGTGGAATACTTTGAAGCTAGTGGTTCAATCTTGCACTTGCTCCTCCAAAATATTTCCCCTAATACCCCTTATTGCGGAAGAACTCTCCTGCACCATGCCATCCTATGTGGCAATGTAGGAGCTGTGCGTGCGCTACTACATTGTGGTGCCAATGTAGAATCGCCTGTTAAAACAACTGGGAAGACAATGTTCAATGCAATACACATGGCTGCCCGCCTTGGCTTGTCAGCAGTCCTTCAATGTTTGATTGATTTTGGTTGTGATATAAACTCCAAGACAGACTCTGGTGAGACAGCTCTAATGATCTGTGCAAAATATAAACATGAAGAGTGTCTCAGAGTAATGGCCATGGCTGGTGCTGATTTTGGCTTGGTCAATGTTGCTGCTCAGTCTGTCAGTTCAATTGCTGTCACAAATCGGTGGTCCCTTGGTTTTCAGGAGGCATTGGTAGATATAATAAGAATCGGCAAGATACCTAAATCCAGCAACTTTTCTGTTTTCTCTCCCCTGATGTTTGTCGCTCAAGCTGGTGATATTGAGGCCTTGAAAGCTATAGTTGATTCAGGAGAATTTGAGATTGATTATCAGGATGATAAAGGTTTTAGTCCAGTCATGATCACTGCTTTGGAGGGTCACGTTGAAGCATTCCGGTTGCTGGTTTATGCAGGAGCTGATGTAAAGTTGTGCAACAAATCTGGTGAGACTGCAATTACTCTATCAGCATTAAGCCAAAACCGTGACCTATTTGAGAAGGTGATGCTTGAATTTGCACTCGAAAAGGGTAATCGCTATGCTGGGGGTTTCTATGCTCTACATTGTGCTGCACGTCGTGGGGACATGGATGCAGCCAAGTTGTTAACAGGTAGGGGTTACGATGTAAATGTCCCTGATGGAGATGGTTACACACCTCTCATGTTAGCAGCCAGGGAAGGCTATGGTACCATGTGTGAACTCTTGATCTCTCATGGGGCCAAGCTAGAGGTCATGAATGCTAAAGGCGAAACGCCACTCTCACTTGCGAGGAAAAGGGGTGGTTTGAAAAATGATGCTGAGCGTGTGATTCTGGATGAACTTGCTCGCAAGCTGGTGCTACGTGGGGCTCGGGTTCTCAAGCACACAAAGGGCGGGAAAGGAAGTCCTCATGAGAAAGATCTGAGAATGGTGGGGAGTGAAGGGGTGCTGCGATGGGGCAAGTCAAATCAGAGAAATGTGATATGCCGAGAGGCTGAGGTGAGAGCTAGCCCGGCTTTTATCAGGAACAGGGGGAGCAAGAGTGATGTCAATGAAGCTGGAGTGTTTAGGGTTGTGACTACCAAAAACAAGGAGGTGCATTTTGTGTGCGAAGGTGGGGTTGAAATGGCCGAGCTTTGGGTGAGGGGTATAACTCTTGTGACCAAAGAGGCTGGCTATTTTCAGTAA

Protein Analysis

750

Amino Acids

80.85

Weight (kDa)

6.55

Isoelectric Point (pI)

27.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 84 - 163 1.2e-06 Ankyrin repeats (3 copies)
Ank_2 PF12796 343 - 401 1.4e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 448 - 528 1.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 549 - 621 2.5e-12 Ankyrin repeats (3 copies)
Ank_4 PF13637 549 - 598 8.8e-09 Ankyrin repeats (many copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000373)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G04940 AT3G04940 AT5G28020 AT5G28020 AT5G28020 AT5G28020 AT5G28020 AT5G28020 AT5G28030 AT5G28030 AT5G28030 AT5G28030 AT5G28030
fragaria_vesca FvH4_6g03790 FvH4_6g03790 FvH4_6g03790 FvH4_6g03790 FvH4_6g03790 FvH4_6g03790 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830 FvH4_6g03830
malus_domestica MD04G1218200.v1.1 MD04G1218300.v1.1 MD04G1218500.v1.1 MD12G1235500.v1.1
prunus_persica Prupe.6G338100_v2.0.a1 Prupe.6G338100_v2.0.a1 Prupe.6G338100_v2.0.a1 Prupe.6G338100_v2.0.a1
pyrus_communis pycom04g19410 pycom04g19420
rosa_chinensis RchiOBHm_Chr3g0452261 RchiOBHm_Chr3g0452281 RchiOBHm_Chr3g0452291 RchiOBHm_Chr3g0452301 RchiOBHm_Chr3g0452341 RchiOBHm_Chr3g0452361 RchiOBHm_Chr3g0452371 RchiOBHm_Chr3g0452381 RchiOBHm_Chr3g0452931
rosa_laevigata RLG00000025606 RLG00000025607 RLG00000025609 RLG00000025610 RLG00000025612 RLG00000025613
rosa_multiflora Rmu_sc0002823.1_g000002 Rmu_sc0010928.1_g000005 Rmu_sc0010928.1_g000006 Rmu_sc0010928.1_g000011 Rmu_sc0010928.1_g000012 Rmu_sc0010928.1_g000015 Rmu_sc0011680.1_g000012 Rmu_sc0011680.1_g000014 Rmu_sc0011680.1_g000015
rosa_roxburghii Rroxscaffold_6G00429380 Rroxscaffold_6G00429390 Rroxscaffold_6G00429400 Rroxscaffold_6G00429410 Rroxscaffold_6G00429420
rosa_rugosa Rorug02G0639700 Rorug02G0639800 Rorug02G0639900 Rorug02G0639900 Rorug02G0639900 Rorug02G0640000 Rorug02G0640000 Rorug02G0640100 Rorug02G0640200 Rorug02G0640300 Rorug02G0640300 Rorug02G0640300 Rorug02G0640300 Rorug02G0640400 Rorug02G0643700
rosa_samantha Rh3AG041800 Rh3AG042100 Rh3AG042200 Rh3AG046700 Rh3BG043400 Rh3CG041800 Rh3DG042700 Rh3DG042800 Rh3DG043100 Rh3DG043200 Rh3DG048700
rosa_wichuraiana Rw3G003180 Rw3G003190 Rw3G003200 Rw3G003220 Rw3G003230 Rw3G003240 Rw3G003660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 135, 243
Acc36I ACCTGC 1 cut(s) 676
Acc65I GGTACC 1 cut(s) 1772
AccB1I GGYRCC 3 cut(s) 146, 980, 1772
AccB7I CCANNNNNTGG 1 cut(s) 825
AccI GTMKAC 2 cut(s) 129, 648
AccII CGCG 2 cut(s) 344, 789
AciI CCGC 6 cut(s) 114, 187, 499, 909, 1048, 1959
AclWI GGATC 3 cut(s) 113, 382, 490
AcoI YGGCCR 3 cut(s) 198, 1179, 2193
AcsI RAATTY 2 cut(s) 1403, 1598
AcuI CTGAAG 2 cut(s) 113, 599
AcyI GRCGYC 3 cut(s) 132, 147, 240
AdeI CACNNNGTG 1 cut(s) 1664
AfaI GTAC 2 cut(s) 516, 1774
AfiI CCNNNNNNNGG 4 cut(s) 825, 908, 1489, 2202
AjiI CACGTC 1 cut(s) 1661
AjnI CCWGG 1 cut(s) 1757
Alw21I GWGCWC 1 cut(s) 661
Alw26I GTCTC 3 cut(s) 1118, 1172, 1529
Alw44I GTGCAC 1 cut(s) 657
AlwI GGATC 3 cut(s) 113, 382, 490
AlwNI CAGNNNCTG 2 cut(s) 1118, 1505
Ama87I CYCGRG 2 cut(s) 383, 1935
AoxI GGCC 7 cut(s) 45, 198, 367, 1179, 1374, 1803, 2193
ApaLI GTGCAC 1 cut(s) 657
ApoI RAATTY 2 cut(s) 1403, 1598
ArsI GACNNNNNNTTYG 8 cut(s) 122, 154, 198, 225, 230, 257, 1241, 1273
Asp700I GAANNNNTTC 1 cut(s) 329
Asp718I GGTACC 1 cut(s) 1772
AspLEI GCGC 5 cut(s) 63, 113, 149, 789, 967
AspS9I GGNCC 3 cut(s) 367, 1257, 1803
AsuC2I CCSGG 2 cut(s) 32, 2078
AsuHPI GGTGA 7 cut(s) 298, 1133, 1376, 1544, 1600, 2077, 2218
AsuNHI GCTAGC 1 cut(s) 2072
AvaI CYCGRG 2 cut(s) 383, 1935
AvaII GGWCC 1 cut(s) 1257
BaeGI GKGCMC 1 cut(s) 661
BalI TGGCCA 1 cut(s) 1181
BanI GGYRCC 3 cut(s) 146, 980, 1772
BanII GRGCYC 1 cut(s) 1936
BbsI GAAGAC 1 cut(s) 1022
Bbv12I GWGCWC 1 cut(s) 661
BbvCI CCTCAGC 1 cut(s) 2061
BccI CCATC 7 cut(s) 97, 378, 513, 941, 1718, 1724, 2013
BceAI ACGGC 3 cut(s) 134, 245, 261
BcgI CGANNNNNNTGC 4 cut(s) 575, 609, 638, 672
BciT130I CCWGG 1 cut(s) 1759
BciVI GTATCC 1 cut(s) 600
BclI TGATCA 1 cut(s) 1449
BcnI CCSGG 2 cut(s) 32, 2078
BcoDI GTCTC 3 cut(s) 1118, 1172, 1529
BfaI CTAG 3 cut(s) 852, 1811, 2073
BfmI CTRYAG 5 cut(s) 538, 652, 669, 771, 1386
BfoI RGCGCY 2 cut(s) 64, 150
BfuAI ACCTGC 1 cut(s) 676
BfuI GTATCC 1 cut(s) 600
BglII AGATCT 2 cut(s) 88, 1984
BlpI GCTNAGC 2 cut(s) 299, 1884
Bme1390I CCNGG 3 cut(s) 32, 1759, 2078
Bme18I GGWCC 1 cut(s) 1257
BmeT110I CYCGRG 2 cut(s) 383, 1935
BmgBI CACGTC 1 cut(s) 1661
BmgT120I GGNCC 3 cut(s) 367, 1257, 1803
BmiI GGNNCC 5 cut(s) 148, 982, 1259, 1774, 1804
BmrFI CCNGG 3 cut(s) 32, 1759, 2078
BmrI ACTGGG 1 cut(s) 1020
BmsI GCATC 5 cut(s) 416, 577, 1581, 1666, 1870
BmtI GCTAGC 1 cut(s) 2076
BmuI ACTGGG 1 cut(s) 1020
BoxI GACNNNNGTC 1 cut(s) 731
BpiI GAAGAC 1 cut(s) 1022
BpmI CTGGAG 2 cut(s) 423, 2145
Bpu10I CCTNAGC 1 cut(s) 2061
Bpu1102I GCTNAGC 2 cut(s) 299, 1884
BpuEI CTTGAG 2 cut(s) 1341, 1928
BpuMI CCSGG 2 cut(s) 32, 2078
BsaAI YACGTR 1 cut(s) 1928
BsaBI GATNNNNATC 1 cut(s) 318
BsaHI GRCGYC 3 cut(s) 132, 147, 240
BsaJI CCNNGG 6 cut(s) 48, 334, 1051, 1182, 1261, 1758
BsaWI WCCGGW 1 cut(s) 1482
BsaXI ACNNNNNCTCC 6 cut(s) 300, 330, 1494, 1524, 2092, 2122
Bsc4I CCNNNNNNNGG 4 cut(s) 825, 908, 1489, 2202
Bse1I ACTGG 4 cut(s) 666, 807, 1015, 1442
Bse3DI GCAATG 1 cut(s) 952
Bse8I GATNNNNATC 1 cut(s) 318
BseBI CCWGG 1 cut(s) 1759
BseDI CCNNGG 6 cut(s) 48, 334, 1051, 1182, 1261, 1758
BseGI GGATG 5 cut(s) 559, 933, 1429, 1681, 1906
BseJI GATNNNNATC 1 cut(s) 318
BseLI CCNNNNNNNGG 4 cut(s) 825, 908, 1489, 2202
BseMI GCAATG 1 cut(s) 952
BseMII CTCAG 7 cut(s) 165, 290, 1183, 1235, 1875, 1979, 2052
BseNI ACTGG 4 cut(s) 666, 807, 1015, 1442
BseRI GAGGAG 2 cut(s) 239, 866
BseSI GKGCMC 1 cut(s) 661
BseYI CCCAGC 2 cut(s) 745, 1628
BsgI GTGCAG 6 cut(s) 615, 620, 816, 852, 908, 1641
Bsh1236I CGCG 2 cut(s) 344, 789
BshFI GGCC 7 cut(s) 47, 200, 369, 1181, 1376, 1805, 2195
BshNI GGYRCC 3 cut(s) 146, 980, 1772
BsiHKAI GWGCWC 1 cut(s) 661
BsiHKCI CYCGRG 2 cut(s) 383, 1935
BsiSI CCGG 5 cut(s) 15, 32, 84, 1483, 2078
BslFI GGGAC 5 cut(s) 203, 776, 1243, 1682, 1703
BslI CCNNNNNNNGG 4 cut(s) 825, 908, 1489, 2202
BsmAI GTCTC 3 cut(s) 1118, 1172, 1529
BsmFI GGGAC 5 cut(s) 203, 776, 1243, 1682, 1703
BsmI GAATGC 2 cut(s) 1478, 1828
BsnI GGCC 7 cut(s) 47, 200, 369, 1181, 1376, 1805, 2195
BsoBI CYCGRG 2 cut(s) 383, 1935
Bsp1286I GDGCHC 2 cut(s) 661, 1936
Bsp1407I TGTACA 1 cut(s) 514
Bsp143I GATC 8 cut(s) 88, 118, 387, 495, 1137, 1449, 1791, 1984
Bsp1720I GCTNAGC 2 cut(s) 299, 1884
Bsp19I CCATGG 1 cut(s) 1182
Bsp68I TCGCGA 1 cut(s) 344
BspACI CCGC 6 cut(s) 114, 187, 499, 909, 1048, 1959
BspANI GGCC 7 cut(s) 47, 200, 369, 1181, 1376, 1805, 2195
BspCNI CTCAG 7 cut(s) 166, 291, 1182, 1234, 1876, 1980, 2053
BspFNI CGCG 2 cut(s) 344, 789
BspHI TCATGA 4 cut(s) 570, 1446, 1818, 1975
BspLI GGNNCC 5 cut(s) 148, 982, 1259, 1774, 1804
BspMAI CTGCAG 2 cut(s) 542, 673
BspMI ACCTGC 1 cut(s) 676
BspOI GCTAGC 1 cut(s) 2076
BspPI GGATC 3 cut(s) 113, 382, 490
BspQI GCTCTTC 1 cut(s) 335
BspT107I GGYRCC 3 cut(s) 146, 980, 1772
BsrDI GCAATG 1 cut(s) 952
BsrGI TGTACA 1 cut(s) 514
BsrI ACTGG 4 cut(s) 666, 807, 1015, 1442
BssECI CCNNGG 6 cut(s) 48, 334, 1051, 1182, 1261, 1758
BssMI GATC 8 cut(s) 88, 118, 387, 495, 1137, 1449, 1791, 1984
BssNI GRCGYC 3 cut(s) 132, 147, 240
BssT1I CCWWGG 3 cut(s) 1051, 1182, 1261
Bst2UI CCWGG 1 cut(s) 1759
Bst4CI ACNGT 4 cut(s) 7, 653, 697, 1571
Bst6I CTCTTC 4 cut(s) 257, 335, 774, 1155
BstACI GRCGYC 3 cut(s) 132, 147, 240
BstAUI TGTACA 1 cut(s) 514
BstBAI YACGTR 1 cut(s) 1928
BstDEI CTNAG 8 cut(s) 174, 299, 624, 1169, 1221, 1884, 1988, 2061
BstDSI CCRYGG 2 cut(s) 334, 1182
BstF5I GGATG 5 cut(s) 559, 933, 1429, 1681, 1906
BstFNI CGCG 2 cut(s) 344, 789
BstH2I RGCGCY 2 cut(s) 64, 150
BstHHI GCGC 5 cut(s) 63, 113, 149, 789, 967
BstKTI GATC 8 cut(s) 91, 121, 390, 498, 1140, 1452, 1794, 1987
BstMAI GTCTC 3 cut(s) 1118, 1172, 1529
BstMBI GATC 8 cut(s) 88, 118, 387, 495, 1137, 1449, 1791, 1984
BstNI CCWGG 1 cut(s) 1759
BstNSI RCATGY 2 cut(s) 521, 537
BstPAI GACNNNNGTC 1 cut(s) 731
BstSCI CCNGG 3 cut(s) 30, 1757, 2076
BstSFI CTRYAG 5 cut(s) 538, 652, 669, 771, 1386
BstSLI GKGCMC 1 cut(s) 661
BstUI CGCG 2 cut(s) 344, 789
BstV2I GAAGAC 1 cut(s) 1022
BstX2I RGATCY 3 cut(s) 88, 387, 1984
BstYI RGATCY 3 cut(s) 88, 387, 1984
BsuI GTATCC 1 cut(s) 600
BsuRI GGCC 7 cut(s) 47, 200, 369, 1181, 1376, 1805, 2195
BtgI CCRYGG 2 cut(s) 334, 1182
BtgZI GCGATG 2 cut(s) 116, 2032
BtrI CACGTC 1 cut(s) 1661
BtsCI GGATG 5 cut(s) 559, 933, 1429, 1681, 1906
BtsI GCAGTG 3 cut(s) 363, 840, 1452
BtsIMutI CAGTG 4 cut(s) 363, 659, 840, 1452
BtuMI TCGCGA 1 cut(s) 344
BveI ACCTGC 1 cut(s) 676
CaiI CAGNNNCTG 2 cut(s) 1118, 1505
CciI TCATGA 4 cut(s) 570, 1446, 1818, 1975
CfoI GCGC 5 cut(s) 63, 113, 149, 789, 967
Cfr13I GGNCC 3 cut(s) 367, 1257, 1803
Csp6I GTAC 2 cut(s) 515, 1773
CviQI GTAC 2 cut(s) 515, 1773
DdeI CTNAG 8 cut(s) 174, 299, 624, 1169, 1221, 1884, 1988, 2061
DinI GGCGCC 1 cut(s) 148
DpnI GATC 8 cut(s) 90, 120, 389, 497, 1139, 1451, 1793, 1986
DpnII GATC 8 cut(s) 88, 118, 387, 495, 1137, 1449, 1791, 1984
DraIII CACNNNGTG 1 cut(s) 1664
EaeI YGGCCR 3 cut(s) 198, 1179, 2193
Eam1104I CTCTTC 4 cut(s) 257, 335, 774, 1155
EarI CTCTTC 4 cut(s) 257, 335, 774, 1155
EciI GGCGGA 1 cut(s) 488
Eco130I CCWWGG 3 cut(s) 1051, 1182, 1261
Eco147I AGGCCT 1 cut(s) 1376
Eco24I GRGCYC 1 cut(s) 1936
Eco47I GGWCC 1 cut(s) 1257
Eco57I CTGAAG 2 cut(s) 113, 599
Eco88I CYCGRG 2 cut(s) 383, 1935
EcoRII CCWGG 1 cut(s) 1757
EcoT14I CCWWGG 3 cut(s) 1051, 1182, 1261
EcoT38I GRGCYC 1 cut(s) 1936
EgeI GGCGCC 1 cut(s) 148
EheI GGCGCC 1 cut(s) 148
ErhI CCWWGG 3 cut(s) 1051, 1182, 1261
FaqI GGGAC 5 cut(s) 203, 776, 1243, 1682, 1703
FauI CCCGC 3 cut(s) 180, 1055, 1952
FbaI TGATCA 1 cut(s) 1449
FblI GTMKAC 2 cut(s) 129, 648
FokI GGATG 5 cut(s) 566, 920, 1436, 1688, 1913
FriOI GRGCYC 1 cut(s) 1936
FspBI CTAG 3 cut(s) 852, 1811, 2073
GlaI GCGC 5 cut(s) 62, 112, 148, 788, 966
GsaI CCCAGC 2 cut(s) 749, 1632
GsuI CTGGAG 2 cut(s) 423, 2145
HaeII RGCGCY 2 cut(s) 64, 150
HaeIII GGCC 7 cut(s) 47, 200, 369, 1181, 1376, 1805, 2195
HapII CCGG 5 cut(s) 15, 32, 84, 1483, 2078
HhaI GCGC 5 cut(s) 63, 113, 149, 789, 967
Hin1I GRCGYC 3 cut(s) 132, 147, 240
Hin6I GCGC 5 cut(s) 61, 111, 147, 787, 965
HinP1I GCGC 5 cut(s) 61, 111, 147, 787, 965
HincII GTYRAC 5 cut(s) 130, 136, 562, 649, 1692
HindII GTYRAC 5 cut(s) 130, 136, 562, 649, 1692
HinfI GANTC 8 cut(s) 194, 213, 379, 992, 1115, 1296, 1394, 1894
HpaI GTTAAC 1 cut(s) 1692
HpaII CCGG 5 cut(s) 15, 32, 84, 1483, 2078
HphI GGTGA 7 cut(s) 298, 1133, 1376, 1544, 1600, 2077, 2218
Hpy166II GTNNAC 8 cut(s) 37, 130, 136, 562, 649, 659, 1692, 1784
Hpy188I TCNGA 7 cut(s) 93, 212, 324, 490, 1172, 1989, 2037
Hpy8I GTNNAC 8 cut(s) 37, 130, 136, 562, 649, 659, 1692, 1784
Hpy99I CGWCG 5 cut(s) 131, 134, 146, 260, 1665
HpyAV CCTTC 7 cut(s) 74, 639, 1079, 1579, 1757, 2000, 2171
HpyCH4III ACNGT 4 cut(s) 7, 653, 697, 1571
HpyCH4IV ACGT 6 cut(s) 132, 240, 468, 1470, 1660, 1927
HpyF3I CTNAG 8 cut(s) 174, 299, 624, 1169, 1221, 1884, 1988, 2061
HpySE526I ACGT 6 cut(s) 132, 240, 468, 1470, 1660, 1927
Hsp92I GRCGYC 3 cut(s) 132, 147, 240
HspAI GCGC 5 cut(s) 61, 111, 147, 787, 965
KasI GGCGCC 1 cut(s) 146
KpnI GGTACC 1 cut(s) 1776
Ksp22I TGATCA 1 cut(s) 1449
KspAI GTTAAC 1 cut(s) 1692
Kzo9I GATC 8 cut(s) 88, 118, 387, 495, 1137, 1449, 1791, 1984
LguI GCTCTTC 1 cut(s) 335
LmnI GCTCC 8 cut(s) 308, 404, 472, 749, 879, 953, 1502, 2100
LweI GCATC 5 cut(s) 416, 577, 1581, 1666, 1870
MaeI CTAG 3 cut(s) 852, 1811, 2073
MaeII ACGT 6 cut(s) 132, 240, 468, 1470, 1660, 1927
MaeIII GTNAC 9 cut(s) 218, 241, 1243, 1466, 1571, 1703, 1733, 2140, 2224
MalI GATC 8 cut(s) 90, 120, 389, 497, 1139, 1451, 1793, 1986
MboI GATC 8 cut(s) 88, 118, 387, 495, 1137, 1449, 1791, 1984
MboII GAAGA 7 cut(s) 244, 301, 322, 791, 924, 1027, 1172
MfeI CAATTG 1 cut(s) 1236
MflI RGATCY 3 cut(s) 88, 387, 1984
MhlI GDGCHC 2 cut(s) 661, 1936
MlsI TGGCCA 1 cut(s) 1181
MluCI AATT 6 cut(s) 281, 293, 1236, 1403, 1542, 1598
MluNI TGGCCA 1 cut(s) 1181
Mly113I GGCGCC 1 cut(s) 147
MlyI GAGTC 2 cut(s) 222, 1109
MmeI TCCRAC 1 cut(s) 417
Mox20I TGGCCA 1 cut(s) 1181
MroXI GAANNNNTTC 1 cut(s) 329
MscI TGGCCA 1 cut(s) 1181
MseI TTAA 4 cut(s) 396, 1002, 1559, 1691
MslI CAYNNNNRTG 5 cut(s) 456, 569, 642, 757, 978
Msp20I TGGCCA 1 cut(s) 1181
MspI CCGG 5 cut(s) 15, 32, 84, 1483, 2078
MspR9I CCNGG 3 cut(s) 32, 1759, 2078
MunI CAATTG 1 cut(s) 1236
Mva1269I GAATGC 2 cut(s) 1478, 1828
MvaI CCWGG 1 cut(s) 1759
MvnI CGCG 2 cut(s) 344, 789
NarI GGCGCC 1 cut(s) 147
NciI CCSGG 2 cut(s) 32, 2078
NcoI CCATGG 1 cut(s) 1182
NdeII GATC 8 cut(s) 88, 118, 387, 495, 1137, 1449, 1791, 1984
NheI GCTAGC 1 cut(s) 2072
NlaIV GGNNCC 5 cut(s) 148, 982, 1259, 1774, 1804
NmeAIII GCCGAG 3 cut(s) 73, 2078, 2221
NmuCI GTSAC 6 cut(s) 241, 1243, 1466, 1571, 2140, 2224
NruI TCGCGA 1 cut(s) 344
NspI RCATGY 2 cut(s) 521, 537
PaeI GCATGC 1 cut(s) 537
PaeR7I CTCGAG 1 cut(s) 383
PagI TCATGA 4 cut(s) 570, 1446, 1818, 1975
PceI AGGCCT 1 cut(s) 1376
PciSI GCTCTTC 1 cut(s) 335
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 147
PctI GAATGC 2 cut(s) 1478, 1828
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 6 cut(s) 194, 379, 992, 1296, 1394, 1894
PflMI CCANNNNNTGG 1 cut(s) 825
PleI GAGTC 2 cut(s) 221, 1109
PluTI GGCGCC 1 cut(s) 150
PpsI GAGTC 2 cut(s) 221, 1109
Ppu21I YACGTR 1 cut(s) 1928
PshAI GACNNNNGTC 1 cut(s) 731
Psp6I CCWGG 1 cut(s) 1757
PspFI CCCAGC 2 cut(s) 745, 1628
PspGI CCWGG 1 cut(s) 1757
PspN4I GGNNCC 5 cut(s) 148, 982, 1259, 1774, 1804
PspPI GGNCC 3 cut(s) 367, 1257, 1803
PstI CTGCAG 2 cut(s) 542, 673
PstNI CAGNNNCTG 2 cut(s) 1118, 1505
PsuI RGATCY 3 cut(s) 88, 387, 1984
RruI TCGCGA 1 cut(s) 344
RsaI GTAC 2 cut(s) 516, 1774
RsaNI GTAC 2 cut(s) 515, 1773
RseI CAYNNNNRTG 5 cut(s) 456, 569, 642, 757, 978
SalI GTCGAC 2 cut(s) 128, 647
SapI GCTCTTC 1 cut(s) 335
SaqAI TTAA 4 cut(s) 396, 1002, 1559, 1691
Sau3AI GATC 8 cut(s) 88, 118, 387, 495, 1137, 1449, 1791, 1984
Sau96I GGNCC 3 cut(s) 367, 1257, 1803
SchI GAGTC 2 cut(s) 222, 1109
ScrFI CCNGG 3 cut(s) 32, 1759, 2078
SduI GDGCHC 2 cut(s) 661, 1936
SfaNI GCATC 5 cut(s) 416, 577, 1581, 1666, 1870
SfcI CTRYAG 5 cut(s) 538, 652, 669, 771, 1386
SfoI GGCGCC 1 cut(s) 148
Sfr274I CTCGAG 1 cut(s) 383
SgrDI CGTCGACG 1 cut(s) 128
SinI GGWCC 1 cut(s) 1257
SlaI CTCGAG 1 cut(s) 383
SmiMI CAYNNNNRTG 5 cut(s) 456, 569, 642, 757, 978
SmlI CTYRAG 3 cut(s) 383, 1356, 1943
SmoI CTYRAG 3 cut(s) 383, 1356, 1943
SphI GCATGC 1 cut(s) 537
Sse9I AATT 6 cut(s) 281, 293, 1236, 1403, 1542, 1598
SseBI AGGCCT 1 cut(s) 1376
SsiI CCGC 6 cut(s) 114, 187, 499, 909, 1048, 1959
SspDI GGCGCC 1 cut(s) 146
SspI AATATT 1 cut(s) 886
SspMI CTAG 3 cut(s) 852, 1811, 2073
StuI AGGCCT 1 cut(s) 1376
StyD4I CCNGG 3 cut(s) 30, 1757, 2076
StyI CCWWGG 3 cut(s) 1051, 1182, 1261
TaaI ACNGT 4 cut(s) 7, 653, 697, 1571
TaiI ACGT 6 cut(s) 135, 243, 471, 1473, 1663, 1930
TaqI TCGA 6 cut(s) 129, 384, 585, 600, 648, 1608
TasI AATT 6 cut(s) 281, 293, 1236, 1403, 1542, 1598
TatI WGTACW 1 cut(s) 514
TauI GCSGC 1 cut(s) 116
TfiI GAWTC 6 cut(s) 194, 379, 992, 1296, 1394, 1894
Tru1I TTAA 4 cut(s) 396, 1002, 1559, 1691
Tru9I TTAA 4 cut(s) 396, 1002, 1559, 1691
TscAI CASTG 4 cut(s) 363, 666, 840, 1459
TseFI GTSAC 6 cut(s) 241, 1243, 1466, 1571, 2140, 2224
Tsp45I GTSAC 6 cut(s) 241, 1243, 1466, 1571, 2140, 2224
TspDTI ATGAA 6 cut(s) 254, 587, 1173, 1835, 1917, 2133
TspGWI ACGGA 2 cut(s) 323, 689
TspRI CASTG 4 cut(s) 363, 666, 840, 1459
Van91I CCANNNNNTGG 1 cut(s) 825
VneI GTGCAC 1 cut(s) 657
VpaK11BI GGWCC 1 cut(s) 1257
XapI RAATTY 2 cut(s) 1403, 1598
XceI RCATGY 2 cut(s) 521, 537
XhoI CTCGAG 1 cut(s) 383
XmiI GTMKAC 2 cut(s) 129, 648
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 3 cut(s) 852, 1811, 2073
ZraI GACGTC 2 cut(s) 133, 241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.