WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD06G1065100.v1.1 |
| pyrus_communis | pycom04g07360 |
| rosa_chinensis | RchiOBHm_Chr2g0151271 |
| rosa_laevigata | RLG00000029209 RLG00000029405 |
| rosa_multiflora | Rmu_sc0003498.1_g000002 Rmu_sc0009409.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00017800 Rroxscaffold_1G00024970 Rroxscaffold_1G00030460 Rroxscaffold_2G00106410 Rroxscaffold_2G00133320 Rroxscaffold_3G00220170 Rroxscaffold_4G00313270 Rroxscaffold_5G00339850 Rroxscaffold_6G00418020 Rroxscaffold_7G00175880 |
| rosa_rugosa | Rorug01G0017700 Rorug05G0318400 Rorug07G0300800 |
| rosa_samantha | Rh1CG004700 Rh1CG043500 Rh1DG112600 Rh1DG195700 Rh2AG218100 Rh2AG300700 Rh2AG454300 Rh2AG454400 Rh2AG459600 Rh2AG581500 Rh2BG119400 Rh2BG123700 Rh2BG174600 Rh2BG524000 Rh2CG125300 Rh2CG441400 Rh2CG441500 Rh2DG120900 Rh2DG125900 Rh2DG297900 Rh2DG324900 Rh2DG339600 Rh3AG238400 Rh3BG207600 Rh5AG278100 Rh5AG507700 Rh5BG529200 Rh5CG324500 Rh7BG426800 Rh7BG450300 |
| rosa_wichuraiana | Rw5G015030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 132 |
| AclI | AACGTT | 1 cut(s) | 149 |
| AcuI | CTGAAG | 1 cut(s) | 144 |
| AgsI | TTSAA | 1 cut(s) | 49 |
| Alw26I | GTCTC | 1 cut(s) | 162 |
| AspS9I | GGNCC | 1 cut(s) | 66 |
| AsuC2I | CCSGG | 1 cut(s) | 64 |
| AvaII | GGWCC | 1 cut(s) | 66 |
| BccI | CCATC | 2 cut(s) | 89, 105 |
| BceAI | ACGGC | 1 cut(s) | 75 |
| BcnI | CCSGG | 1 cut(s) | 64 |
| BcoDI | GTCTC | 1 cut(s) | 162 |
| BfaI | CTAG | 1 cut(s) | 84 |
| BisI | GCNGC | 1 cut(s) | 132 |
| BlsI | GCNGC | 1 cut(s) | 133 |
| Bme1390I | CCNGG | 1 cut(s) | 64 |
| Bme18I | GGWCC | 1 cut(s) | 66 |
| BmgT120I | GGNCC | 1 cut(s) | 66 |
| BmiI | GGNNCC | 2 cut(s) | 67, 89 |
| BmrFI | CCNGG | 1 cut(s) | 64 |
| BmsI | GCATC | 2 cut(s) | 62, 118 |
| BpuMI | CCSGG | 1 cut(s) | 64 |
| BseGI | GGATG | 1 cut(s) | 59 |
| BseRI | GAGGAG | 1 cut(s) | 130 |
| BsiSI | CCGG | 1 cut(s) | 63 |
| BsmAI | GTCTC | 1 cut(s) | 162 |
| BspACI | CCGC | 1 cut(s) | 132 |
| BspLI | GGNNCC | 2 cut(s) | 67, 89 |
| Bst4CI | ACNGT | 1 cut(s) | 43 |
| BstC8I | GCNNGC | 1 cut(s) | 25 |
| BstF5I | GGATG | 1 cut(s) | 59 |
| BstMAI | GTCTC | 1 cut(s) | 162 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 128 |
| BstSCI | CCNGG | 1 cut(s) | 62 |
| BtsCI | GGATG | 1 cut(s) | 59 |
| Cac8I | GCNNGC | 1 cut(s) | 25 |
| Cfr13I | GGNCC | 1 cut(s) | 66 |
| CviAII | CATG | 1 cut(s) | 161 |
| CviJI | RGCY | 2 cut(s) | 90, 122 |
| CviKI_1 | RGCY | 2 cut(s) | 90, 122 |
| Eco47I | GGWCC | 1 cut(s) | 66 |
| Eco57I | CTGAAG | 1 cut(s) | 144 |
| FaeI | CATG | 1 cut(s) | 164 |
| FaiI | YATR | 3 cut(s) | 21, 29, 162 |
| FatI | CATG | 1 cut(s) | 160 |
| Fnu4HI | GCNGC | 1 cut(s) | 132 |
| FokI | GGATG | 1 cut(s) | 46 |
| Fsp4HI | GCNGC | 1 cut(s) | 132 |
| FspBI | CTAG | 1 cut(s) | 84 |
| GluI | GCNGC | 1 cut(s) | 132 |
| HapII | CCGG | 1 cut(s) | 63 |
| Hin1II | CATG | 1 cut(s) | 164 |
| HinfI | GANTC | 1 cut(s) | 155 |
| HpaII | CCGG | 1 cut(s) | 63 |
| Hpy188I | TCNGA | 1 cut(s) | 70 |
| HpyAV | CCTTC | 1 cut(s) | 43 |
| HpyCH4III | ACNGT | 1 cut(s) | 43 |
| HpyCH4IV | ACGT | 1 cut(s) | 149 |
| HpyCH4V | TGCA | 1 cut(s) | 23 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 128 |
| HpySE526I | ACGT | 1 cut(s) | 149 |
| Hsp92II | CATG | 1 cut(s) | 164 |
| LmnI | GCTCC | 1 cut(s) | 87 |
| LpnPI | CCDG | 2 cut(s) | 9, 76 |
| LweI | GCATC | 2 cut(s) | 62, 118 |
| MaeI | CTAG | 1 cut(s) | 84 |
| MaeII | ACGT | 1 cut(s) | 149 |
| MboII | GAAGA | 1 cut(s) | 137 |
| MlyI | GAGTC | 1 cut(s) | 164 |
| MnlI | CCTC | 2 cut(s) | 148, 151 |
| MspI | CCGG | 1 cut(s) | 63 |
| MspR9I | CCNGG | 1 cut(s) | 64 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 128 |
| NciI | CCSGG | 1 cut(s) | 64 |
| NlaIII | CATG | 1 cut(s) | 164 |
| NlaIV | GGNNCC | 2 cut(s) | 67, 89 |
| PkrI | GCNGC | 1 cut(s) | 133 |
| PleI | GAGTC | 1 cut(s) | 163 |
| PpsI | GAGTC | 1 cut(s) | 163 |
| Psp1406I | AACGTT | 1 cut(s) | 149 |
| PspN4I | GGNNCC | 2 cut(s) | 67, 89 |
| PspPI | GGNCC | 1 cut(s) | 66 |
| SatI | GCNGC | 1 cut(s) | 132 |
| Sau96I | GGNCC | 1 cut(s) | 66 |
| SchI | GAGTC | 1 cut(s) | 164 |
| ScrFI | CCNGG | 1 cut(s) | 64 |
| SetI | ASST | 3 cut(s) | 78, 140, 152 |
| SfaNI | GCATC | 2 cut(s) | 62, 118 |
| SgeI | CNNG | 7 cut(s) | 36, 75, 76, 96, 104, 154, 173 |
| SinI | GGWCC | 1 cut(s) | 66 |
| SsiI | CCGC | 1 cut(s) | 132 |
| SspMI | CTAG | 1 cut(s) | 84 |
| StyD4I | CCNGG | 1 cut(s) | 62 |
| TaaI | ACNGT | 1 cut(s) | 43 |
| TaiI | ACGT | 1 cut(s) | 152 |
| TaqI | TCGA | 1 cut(s) | 143 |
| TauI | GCSGC | 1 cut(s) | 134 |
| VpaK11BI | GGWCC | 1 cut(s) | 66 |
| XspI | CTAG | 1 cut(s) | 84 |