Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0001543

Physical Location & Seq

Genomic Coordinates Reverse (-)

2936323 .. 2938056

Gene Structure 1734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0017700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGCATGAAGATGGCTCCATTATACGTGCCTCTATTAAAAAAGAAAGCCGAGAGACTGTTCTTCATATTGTGGCCTCTAAAGGACATTGCGACTTTATGAAGAAGTTGCTGGAGTTGTTGAGAGAGGATGACTTATACTTGCTGGACAAGAAGGGGAATACAGCTTTTTGTTTGGCTGTAGCAGCGGGAAAGGTACGAGTGGCAAAGATCATGCTGGAAAAAGATCCCCTCATGGCAACACTTAAGTGTGCTGAAGGATGGTCACCTCTTCGTTTAGCCACTTTTCGTGGTCATAGCAAGATGGCATGGTTTCTGTACCCTAAAATTATCGAAGACCTTGAACAAGAGGAACGAGTTGCAACATTTTTCATTTGCATCAACAGAACTGACACTTCTTTGTACGAACTAGCATTGAAAATGCTTCTTGAATACCGGGAGCTTGCAGAGGCTCGTGACACCAGTGGTGAAACAGCATTCCATTTGTTGGCTGGGAAACCTAAAGCATTTAGATCAGCAATGTTGAAATGCTTCCTTCACATTTGTTTAGGAAAGCAGCTCGAATCTCCTGGCCTTCAAGTACTAAAACAACTTTGGAAAATAGTTTCAGAGAAAGATGAGAAGACGGTTAAAGGAATATTCTTAACAATTCCTTCAAAAGGAAAGCCTTCAAATGCATTGTTCATTGCAGCTAAATGTGGAAATGCTCAGTTCCTGGCTGAGCTTATAGCCTCCGATCCTGCTTTGATAATTGAAACAGATGAGCGCGATCGGAATGTATTCCACATTGGAGCTATGTATCATCAGTGGAGTATCTTCAGTCTGGTAGATAAGTTGGGTGCAGATGAGCATTCCATACTCTCTGCACAAGACGATAGGGACAACACCATACTGCATTTAGCAGCAAAGGTAGCTGGACCCCTTCAATGGGATGAGATGGTTGGACCTGCAATTCGAATGAAACGAGATTTGAAATGGTTTAAGTGGTATCCCAACACCTGCACCGTCATCAGGGCCGGCCCTGAGGGCTGCCACCTGAGGCAGCCGGCTCAGGCCACCGGCTCCGGGGGGGCCTCGGAAGTTCTGTATATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000228 GO:0000785 GO:0000790 GO:0003674 GO:0003682 GO:0003712 GO:0003714 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005730 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006336 GO:0006355 GO:0006996 GO:0008150 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0019219 GO:0019222 GO:0022607 GO:0030874 GO:0030875 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031491 GO:0031497 GO:0031935 GO:0031974 GO:0031981 GO:0033043 GO:0033044 GO:0034622 GO:0034724 GO:0034728 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044452 GO:0044454 GO:0044464 GO:0044877 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051128 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0060968 GO:0065003 GO:0065004 GO:0065007 GO:0070013 GO:0071103 GO:0071824 GO:0071840 GO:0080090 GO:0140110 GO:1902275 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hira WD40

Protein Analysis

363

Amino Acids

40.75

Weight (kDa)

8.27

Isoelectric Point (pI)

35.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ank_2	PF12796	21 - 108	9.4e-11	Ankyrin repeats (3 copies)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001543)

Species	Orthologous Gene IDs
malus_domestica	MD06G1065100.v1.1
pyrus_communis	pycom04g07360
rosa_chinensis	RchiOBHm_Chr2g0151271
rosa_laevigata	RLG00000029209 RLG00000029405
rosa_multiflora	Rmu_sc0003498.1_g000002 Rmu_sc0009409.1_g000008
rosa_roxburghii	Rroxscaffold_1G00017800 Rroxscaffold_1G00024970 Rroxscaffold_1G00030460 Rroxscaffold_2G00106410 Rroxscaffold_2G00133320 Rroxscaffold_3G00220170 Rroxscaffold_4G00313270 Rroxscaffold_5G00339850 Rroxscaffold_6G00418020 Rroxscaffold_7G00175880
rosa_rugosa	Rorug01G0017700 Rorug05G0318400 Rorug07G0300800
rosa_samantha	Rh1CG004700 Rh1CG043500 Rh1DG112600 Rh1DG195700 Rh2AG218100 Rh2AG300700 Rh2AG454300 Rh2AG454400 Rh2AG459600 Rh2AG581500 Rh2BG119400 Rh2BG123700 Rh2BG174600 Rh2BG524000 Rh2CG125300 Rh2CG441400 Rh2CG441500 Rh2DG120900 Rh2DG125900 Rh2DG297900 Rh2DG324900 Rh2DG339600 Rh3AG238400 Rh3BG207600 Rh5AG278100 Rh5AG507700 Rh5BG529200 Rh5CG324500 Rh7BG426800 Rh7BG450300
rosa_wichuraiana	Rw5G015030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1004
Acc36I	ACCTGC	2 cut(s)	952, 1004
AccB7I	CCANNNNNTGG	1 cut(s)	484
AccII	CGCG	1 cut(s)	765
AciI	CCGC	1 cut(s)	185
AclWI	GGATC	2 cut(s)	218, 728
AcuI	CTGAAG	2 cut(s)	273, 799
AfaI	GTAC	4 cut(s)	195, 317, 401, 579
AfiI	CCNNNNNNNGG	6 cut(s)	484, 656, 924, 925, 1008, 1062
AflII	CTTAAG	1 cut(s)	242
AjnI	CCWGG	2 cut(s)	565, 711
AleI	CACNNNNGTG	1 cut(s)	244
AluBI	AGCT	7 cut(s)	164, 439, 556, 689, 721, 791, 911
AluI	AGCT	7 cut(s)	164, 439, 556, 689, 721, 791, 911
Alw26I	GTCTC	1 cut(s)	47
AlwI	GGATC	2 cut(s)	218, 728
AlwNI	CAGNNNCTG	1 cut(s)	712
AoxI	GGCC	6 cut(s)	72, 568, 1011, 1015, 1050, 1068
ApeKI	GCWGC	6 cut(s)	182, 553, 686, 899, 1026, 1039
ArsI	GACNNNNNNTTYG	2 cut(s)	933, 965
Asp700I	GAANNNNTTC	3 cut(s)	527, 664, 776
AspLEI	GCGC	1 cut(s)	765
AspS9I	GGNCC	5 cut(s)	914, 941, 1011, 1016, 1068
AsuC2I	CCSGG	2 cut(s)	434, 1063
AsuHPI	GGTGA	2 cut(s)	255, 476
AsuII	TTCGAA	1 cut(s)	952
AvaII	GGWCC	2 cut(s)	914, 941
AxyI	CCTNAGG	2 cut(s)	1020, 1034
BauI	CACGAG	1 cut(s)	450
BbsI	GAAGAC	2 cut(s)	339, 626
BbvI	GCAGC	6 cut(s)	194, 565, 698, 911, 1013, 1051
BccI	CCATC	4 cut(s)	5, 252, 295, 928
BciT130I	CCWGG	2 cut(s)	567, 713
BciVI	GTATCC	1 cut(s)	996
BcnI	CCSGG	2 cut(s)	434, 1063
BcoDI	GTCTC	1 cut(s)	47
BfaI	CTAG	1 cut(s)	407
BfmI	CTRYAG	1 cut(s)	177
BfrI	CTTAAG	1 cut(s)	242
BfuAI	ACCTGC	2 cut(s)	952, 1004
BfuI	GTATCC	1 cut(s)	996
BglI	GCCNNNNNGGC	1 cut(s)	1023
BisI	GCNGC	6 cut(s)	183, 554, 687, 900, 1027, 1040
BlpI	GCTNAGC	1 cut(s)	717
BlsI	GCNGC	6 cut(s)	184, 555, 688, 901, 1028, 1041
BmcAI	AGTACT	1 cut(s)	579
Bme1390I	CCNGG	4 cut(s)	434, 567, 713, 1063
Bme18I	GGWCC	2 cut(s)	914, 941
BmgT120I	GGNCC	5 cut(s)	914, 941, 1011, 1016, 1068
BmiI	GGNNCC	4 cut(s)	16, 916, 1060, 1069
BmrFI	CCNGG	4 cut(s)	434, 567, 713, 1063
BmsI	GCATC	1 cut(s)	384
BpiI	GAAGAC	2 cut(s)	339, 626
BpmI	CTGGAG	1 cut(s)	131
Bpu10I	CCTNAGC	1 cut(s)	1047
Bpu1102I	GCTNAGC	1 cut(s)	717
Bpu14I	TTCGAA	1 cut(s)	952
BpuMI	CCSGG	2 cut(s)	434, 1063
BsaAI	YACGTR	1 cut(s)	26
BsaJI	CCNNGG	2 cut(s)	1062, 1071
Bsc4I	CCNNNNNNNGG	6 cut(s)	484, 656, 924, 925, 1008, 1062
Bse118I	RCCGGY	3 cut(s)	1013, 1042, 1055
Bse1I	ACTGG	1 cut(s)	459
Bse21I	CCTNAGG	2 cut(s)	1020, 1034
Bse3DI	GCAATG	3 cut(s)	85, 522, 681
BseBI	CCWGG	2 cut(s)	567, 713
BseDI	CCNNGG	2 cut(s)	1062, 1071
BseGI	GGATG	3 cut(s)	133, 263, 934
BseLI	CCNNNNNNNGG	6 cut(s)	484, 656, 924, 925, 1008, 1062
BseMI	GCAATG	3 cut(s)	85, 522, 681
BseMII	CTCAG	5 cut(s)	708, 719, 1011, 1025, 1061
BseNI	ACTGG	1 cut(s)	459
BseXI	GCAGC	6 cut(s)	194, 565, 698, 911, 1013, 1051
BseYI	CCCAGC	1 cut(s)	488
BsgI	GTGCAG	3 cut(s)	846, 858, 982
Bsh1236I	CGCG	1 cut(s)	765
Bsh1285I	CGRYCG	1 cut(s)	769
BshFI	GGCC	6 cut(s)	74, 570, 1013, 1017, 1052, 1070
BsiEI	CGRYCG	1 cut(s)	769
BsiSI	CCGG	5 cut(s)	433, 1014, 1043, 1056, 1062
BslFI	GGGAC	1 cut(s)	890
BslI	CCNNNNNNNGG	6 cut(s)	484, 656, 924, 925, 1008, 1062
BsmAI	GTCTC	1 cut(s)	47
BsmFI	GGGAC	1 cut(s)	890
BsmI	GAATGC	2 cut(s)	473, 847
BsnI	GGCC	6 cut(s)	74, 570, 1013, 1017, 1052, 1070
Bsp119I	TTCGAA	1 cut(s)	952
Bsp143I	GATC	5 cut(s)	207, 223, 509, 733, 766
Bsp1720I	GCTNAGC	1 cut(s)	717
BspACI	CCGC	1 cut(s)	185
BspANI	GGCC	6 cut(s)	74, 570, 1013, 1017, 1052, 1070
BspCNI	CTCAG	5 cut(s)	709, 718, 1012, 1026, 1060
BspFNI	CGCG	1 cut(s)	765
BspLI	GGNNCC	4 cut(s)	16, 916, 1060, 1069
BspMI	ACCTGC	2 cut(s)	952, 1004
BspPI	GGATC	2 cut(s)	218, 728
BspT104I	TTCGAA	1 cut(s)	952
BspTI	CTTAAG	1 cut(s)	242
BsrDI	GCAATG	3 cut(s)	85, 522, 681
BsrFI	RCCGGY	3 cut(s)	1013, 1042, 1055
BsrI	ACTGG	1 cut(s)	459
BssAI	RCCGGY	3 cut(s)	1013, 1042, 1055
BssECI	CCNNGG	2 cut(s)	1062, 1071
BssMI	GATC	5 cut(s)	207, 223, 509, 733, 766
BssSI	CACGAG	1 cut(s)	450
Bst2BI	CACGAG	1 cut(s)	450
Bst2UI	CCWGG	2 cut(s)	567, 713
Bst4CI	ACNGT	3 cut(s)	58, 625, 1003
Bst6I	CTCTTC	1 cut(s)	273
BstAFI	CTTAAG	1 cut(s)	242
BstBAI	YACGTR	1 cut(s)	26
BstBI	TTCGAA	1 cut(s)	952
BstC8I	GCNNGC	3 cut(s)	441, 1015, 1044
BstDEI	CTNAG	5 cut(s)	705, 717, 1020, 1034, 1047
BstEII	GGTNACC	1 cut(s)	261
BstENI	CCTNNNNNAGG	1 cut(s)	654
BstF5I	GGATG	3 cut(s)	133, 263, 934
BstFNI	CGCG	1 cut(s)	765
BstHHI	GCGC	1 cut(s)	765
BstKTI	GATC	5 cut(s)	210, 226, 512, 736, 769
BstMAI	GTCTC	1 cut(s)	47
BstMBI	GATC	5 cut(s)	207, 223, 509, 733, 766
BstMCI	CGRYCG	1 cut(s)	769
BstMWI	GCNNNNNNNGC	3 cut(s)	182, 908, 1023
BstNI	CCWGG	2 cut(s)	567, 713
BstPI	GGTNACC	1 cut(s)	261
BstSCI	CCNGG	4 cut(s)	432, 565, 711, 1061
BstSFI	CTRYAG	1 cut(s)	177
BstUI	CGCG	1 cut(s)	765
BstV1I	GCAGC	6 cut(s)	194, 565, 698, 911, 1013, 1051
BstV2I	GAAGAC	2 cut(s)	339, 626
BstX2I	RGATCY	1 cut(s)	223
BstYI	RGATCY	1 cut(s)	223
Bsu36I	CCTNAGG	2 cut(s)	1020, 1034
BsuI	GTATCC	1 cut(s)	996
BsuRI	GGCC	6 cut(s)	74, 570, 1013, 1017, 1052, 1070
BtsCI	GGATG	3 cut(s)	133, 263, 934
BtsIMutI	CAGTG	2 cut(s)	466, 809
BveI	ACCTGC	2 cut(s)	952, 1004
Cac8I	GCNNGC	3 cut(s)	441, 1015, 1044
CaiI	CAGNNNCTG	1 cut(s)	712
CfoI	GCGC	1 cut(s)	765
Cfr10I	RCCGGY	3 cut(s)	1013, 1042, 1055
Cfr13I	GGNCC	5 cut(s)	914, 941, 1011, 1016, 1068
Csp6I	GTAC	4 cut(s)	194, 316, 400, 578
CviAII	CATG	4 cut(s)	5, 211, 232, 306
CviQI	GTAC	4 cut(s)	194, 316, 400, 578
DdeI	CTNAG	5 cut(s)	705, 717, 1020, 1034, 1047
DpnI	GATC	5 cut(s)	209, 225, 511, 735, 768
DpnII	GATC	5 cut(s)	207, 223, 509, 733, 766
Eam1104I	CTCTTC	1 cut(s)	273
EarI	CTCTTC	1 cut(s)	273
Eco47I	GGWCC	2 cut(s)	914, 941
Eco57I	CTGAAG	2 cut(s)	273, 799
Eco81I	CCTNAGG	2 cut(s)	1020, 1034
Eco91I	GGTNACC	1 cut(s)	261
EcoNI	CCTNNNNNAGG	1 cut(s)	654
EcoO109I	RGGNCCY	1 cut(s)	1068
EcoO65I	GGTNACC	1 cut(s)	261
EcoRII	CCWGG	2 cut(s)	565, 711
EcoT22I	ATGCAT	2 cut(s)	6, 676
FaeI	CATG	4 cut(s)	8, 214, 235, 309
FaqI	GGGAC	1 cut(s)	890
FatI	CATG	4 cut(s)	4, 210, 231, 305
FauI	CCCGC	1 cut(s)	178
Fnu4HI	GCNGC	6 cut(s)	183, 554, 687, 900, 1027, 1040
FokI	GGATG	3 cut(s)	140, 270, 941
FseI	GGCCGGCC	1 cut(s)	1017
Fsp4HI	GCNGC	6 cut(s)	183, 554, 687, 900, 1027, 1040
FspBI	CTAG	1 cut(s)	407
GlaI	GCGC	1 cut(s)	764
GluI	GCNGC	6 cut(s)	183, 554, 687, 900, 1027, 1040
GsaI	CCCAGC	1 cut(s)	492
GsuI	CTGGAG	1 cut(s)	131
HaeIII	GGCC	6 cut(s)	74, 570, 1013, 1017, 1052, 1070
HapII	CCGG	5 cut(s)	433, 1014, 1043, 1056, 1062
HhaI	GCGC	1 cut(s)	765
Hin1II	CATG	4 cut(s)	8, 214, 235, 309
Hin6I	GCGC	1 cut(s)	763
HinP1I	GCGC	1 cut(s)	763
HinfI	GANTC	1 cut(s)	560
HpaII	CCGG	5 cut(s)	433, 1014, 1043, 1056, 1062
HphI	GGTGA	2 cut(s)	255, 476
Hpy188I	TCNGA	4 cut(s)	607, 733, 771, 1075
Hpy188III	TCNNGA	2 cut(s)	425, 452
HpyAV	CCTTC	7 cut(s)	145, 248, 542, 581, 660, 675, 929
HpyCH4III	ACNGT	3 cut(s)	58, 625, 1003
HpyCH4IV	ACGT	1 cut(s)	25
HpyF10VI	GCNNNNNNNGC	3 cut(s)	182, 908, 1023
HpyF3I	CTNAG	5 cut(s)	705, 717, 1020, 1034, 1047
HpySE526I	ACGT	1 cut(s)	25
Hsp92II	CATG	4 cut(s)	8, 214, 235, 309
HspAI	GCGC	1 cut(s)	763
KroI	GCCGGC	2 cut(s)	1013, 1042
KroNI	GCCGGC	2 cut(s)	1015, 1044
Kzo9I	GATC	5 cut(s)	207, 223, 509, 733, 766
LmnI	GCTCC	4 cut(s)	20, 436, 788, 1064
Lsp1109I	GCAGC	6 cut(s)	194, 565, 698, 911, 1013, 1051
LweI	GCATC	1 cut(s)	384
MaeI	CTAG	1 cut(s)	407
MaeII	ACGT	1 cut(s)	25
MaeIII	GTNAC	2 cut(s)	261, 452
MalI	GATC	5 cut(s)	209, 225, 511, 735, 768
MboI	GATC	5 cut(s)	207, 223, 509, 733, 766
MboII	GAAGA	7 cut(s)	20, 53, 112, 260, 344, 631, 805
MflI	RGATCY	1 cut(s)	223
MluCI	AATT	4 cut(s)	324, 645, 747, 948
MmeI	TCCRAC	1 cut(s)	919
Mph1103I	ATGCAT	2 cut(s)	6, 676
MroNI	GCCGGC	2 cut(s)	1013, 1042
MroXI	GAANNNNTTC	3 cut(s)	527, 664, 776
MseI	TTAA	5 cut(s)	36, 243, 627, 641, 978
MslI	CAYNNNNRTG	2 cut(s)	9, 244
MspA1I	CMGCKG	1 cut(s)	185
MspCI	CTTAAG	1 cut(s)	242
MspI	CCGG	5 cut(s)	433, 1014, 1043, 1056, 1062
MspR9I	CCNGG	4 cut(s)	434, 567, 713, 1063
Mva1269I	GAATGC	2 cut(s)	473, 847
MvaI	CCWGG	2 cut(s)	567, 713
MvnI	CGCG	1 cut(s)	765
MwoI	GCNNNNNNNGC	3 cut(s)	182, 908, 1023
NaeI	GCCGGC	2 cut(s)	1015, 1044
NciI	CCSGG	2 cut(s)	434, 1063
NdeII	GATC	5 cut(s)	207, 223, 509, 733, 766
NgoMIV	GCCGGC	2 cut(s)	1013, 1042
NlaIII	CATG	4 cut(s)	8, 214, 235, 309
NlaIV	GGNNCC	4 cut(s)	16, 916, 1060, 1069
NmeAIII	GCCGAG	1 cut(s)	74
NmuCI	GTSAC	2 cut(s)	261, 452
NsiI	ATGCAT	2 cut(s)	6, 676
NspV	TTCGAA	1 cut(s)	952
OliI	CACNNNNGTG	1 cut(s)	244
PaqCI	CACCTGC	1 cut(s)	1004
PcsI	WCGNNNNNNNCGW	1 cut(s)	958
PctI	GAATGC	2 cut(s)	473, 847
PdiI	GCCGGC	2 cut(s)	1015, 1044
PdmI	GAANNNNTTC	3 cut(s)	527, 664, 776
PfeI	GAWTC	1 cut(s)	560
PflMI	CCANNNNNTGG	1 cut(s)	484
PkrI	GCNGC	6 cut(s)	184, 555, 688, 901, 1028, 1041
Ple19I	CGATCG	1 cut(s)	769
Ppu21I	YACGTR	1 cut(s)	26
Psp6I	CCWGG	2 cut(s)	565, 711
PspEI	GGTNACC	1 cut(s)	261
PspFI	CCCAGC	1 cut(s)	488
PspGI	CCWGG	2 cut(s)	565, 711
PspN4I	GGNNCC	4 cut(s)	16, 916, 1060, 1069
PspPI	GGNCC	5 cut(s)	914, 941, 1011, 1016, 1068
PstNI	CAGNNNCTG	1 cut(s)	712
PsuI	RGATCY	1 cut(s)	223
PvuI	CGATCG	1 cut(s)	769
RigI	GGCCGGCC	1 cut(s)	1017
RsaI	GTAC	4 cut(s)	195, 317, 401, 579
RsaNI	GTAC	4 cut(s)	194, 316, 400, 578
RseI	CAYNNNNRTG	2 cut(s)	9, 244
SaqAI	TTAA	5 cut(s)	36, 243, 627, 641, 978
SatI	GCNGC	6 cut(s)	183, 554, 687, 900, 1027, 1040
Sau3AI	GATC	5 cut(s)	207, 223, 509, 733, 766
Sau96I	GGNCC	5 cut(s)	914, 941, 1011, 1016, 1068
ScaI	AGTACT	1 cut(s)	579
ScrFI	CCNGG	4 cut(s)	434, 567, 713, 1063
SfaNI	GCATC	1 cut(s)	384
SfcI	CTRYAG	1 cut(s)	177
SfuI	TTCGAA	1 cut(s)	952
SinI	GGWCC	2 cut(s)	914, 941
SmiMI	CAYNNNNRTG	2 cut(s)	9, 244
SmlI	CTYRAG	1 cut(s)	242
SmoI	CTYRAG	1 cut(s)	242
Sse9I	AATT	4 cut(s)	324, 645, 747, 948
SsiI	CCGC	1 cut(s)	185
SspI	AATATT	1 cut(s)	636
SspMI	CTAG	1 cut(s)	407
StyD4I	CCNGG	4 cut(s)	432, 565, 711, 1061
TaaI	ACNGT	3 cut(s)	58, 625, 1003
TaiI	ACGT	1 cut(s)	28
TaqI	TCGA	3 cut(s)	330, 558, 952
TasI	AATT	4 cut(s)	324, 645, 747, 948
TatI	WGTACW	1 cut(s)	577
TfiI	GAWTC	1 cut(s)	560
Tru1I	TTAA	5 cut(s)	36, 243, 627, 641, 978
Tru9I	TTAA	5 cut(s)	36, 243, 627, 641, 978
TscAI	CASTG	2 cut(s)	466, 809
TseFI	GTSAC	2 cut(s)	261, 452
TseI	GCWGC	6 cut(s)	182, 553, 686, 899, 1026, 1039
Tsp45I	GTSAC	2 cut(s)	261, 452
TspDTI	ATGAA	6 cut(s)	21, 53, 113, 358, 670, 971
TspRI	CASTG	2 cut(s)	466, 809
Van91I	CCANNNNNTGG	1 cut(s)	484
Vha464I	CTTAAG	1 cut(s)	242
VpaK11BI	GGWCC	2 cut(s)	914, 941
XagI	CCTNNNNNAGG	1 cut(s)	654
XcmI	CCANNNNNNNNNTGG	1 cut(s)	485
XmnI	GAANNNNTTC	3 cut(s)	527, 664, 776
XspI	CTAG	1 cut(s)	407
ZrmI	AGTACT	1 cut(s)	579
Zsp2I	ATGCAT	2 cut(s)	6, 676

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.