WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD06G1065100.v1.1 |
| pyrus_communis | pycom04g07360 |
| rosa_chinensis | RchiOBHm_Chr2g0151271 |
| rosa_laevigata | RLG00000029209 RLG00000029405 |
| rosa_multiflora | Rmu_sc0003498.1_g000002 Rmu_sc0009409.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00017800 Rroxscaffold_1G00024970 Rroxscaffold_1G00030460 Rroxscaffold_2G00106410 Rroxscaffold_2G00133320 Rroxscaffold_3G00220170 Rroxscaffold_4G00313270 Rroxscaffold_5G00339850 Rroxscaffold_6G00418020 Rroxscaffold_7G00175880 |
| rosa_rugosa | Rorug01G0017700 Rorug05G0318400 Rorug07G0300800 |
| rosa_samantha | Rh1CG004700 Rh1CG043500 Rh1DG112600 Rh1DG195700 Rh2AG218100 Rh2AG300700 Rh2AG454300 Rh2AG454400 Rh2AG459600 Rh2AG581500 Rh2BG119400 Rh2BG123700 Rh2BG174600 Rh2BG524000 Rh2CG125300 Rh2CG441400 Rh2CG441500 Rh2DG120900 Rh2DG125900 Rh2DG297900 Rh2DG324900 Rh2DG339600 Rh3AG238400 Rh3BG207600 Rh5AG278100 Rh5AG507700 Rh5BG529200 Rh5CG324500 Rh7BG426800 Rh7BG450300 |
| rosa_wichuraiana | Rw5G015030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 62, 180 |
| AcuI | CTGAAG | 1 cut(s) | 192 |
| AfaI | GTAC | 1 cut(s) | 6 |
| AgsI | TTSAA | 2 cut(s) | 44, 97 |
| Alw26I | GTCTC | 1 cut(s) | 210 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 48 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 16, 49 |
| BbvCI | CCTCAGC | 1 cut(s) | 190 |
| BccI | CCATC | 2 cut(s) | 137, 153 |
| BceAI | ACGGC | 1 cut(s) | 123 |
| BcoDI | GTCTC | 1 cut(s) | 210 |
| BfaI | CTAG | 3 cut(s) | 249, 278, 285 |
| BisI | GCNGC | 2 cut(s) | 62, 180 |
| BlsI | GCNGC | 2 cut(s) | 63, 181 |
| BmiI | GGNNCC | 1 cut(s) | 137 |
| BmrI | ACTGGG | 1 cut(s) | 141 |
| BmsI | GCATC | 3 cut(s) | 110, 166, 271 |
| BmuI | ACTGGG | 1 cut(s) | 141 |
| Bpu10I | CCTNAGC | 1 cut(s) | 190 |
| Bse1I | ACTGG | 2 cut(s) | 12, 136 |
| BseMII | CTCAG | 1 cut(s) | 204 |
| BseNI | ACTGG | 2 cut(s) | 12, 136 |
| BseRI | GAGGAG | 1 cut(s) | 178 |
| BsmAI | GTCTC | 1 cut(s) | 210 |
| Bsp143I | GATC | 1 cut(s) | 274 |
| BspACI | CCGC | 2 cut(s) | 62, 180 |
| BspCNI | CTCAG | 1 cut(s) | 203 |
| BspLI | GGNNCC | 1 cut(s) | 137 |
| BsrI | ACTGG | 2 cut(s) | 12, 136 |
| BssMI | GATC | 1 cut(s) | 274 |
| Bst4CI | ACNGT | 2 cut(s) | 38, 91 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 265 |
| BstC8I | GCNNGC | 1 cut(s) | 73 |
| BstDEI | CTNAG | 2 cut(s) | 14, 190 |
| BstKTI | GATC | 1 cut(s) | 277 |
| BstMAI | GTCTC | 1 cut(s) | 210 |
| BstMBI | GATC | 1 cut(s) | 274 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 176, 265 |
| Cac8I | GCNNGC | 1 cut(s) | 73 |
| Csp6I | GTAC | 1 cut(s) | 5 |
| CviAII | CATG | 1 cut(s) | 209 |
| CviJI | RGCY | 3 cut(s) | 138, 164, 170 |
| CviKI_1 | RGCY | 3 cut(s) | 138, 164, 170 |
| CviQI | GTAC | 1 cut(s) | 5 |
| DdeI | CTNAG | 2 cut(s) | 14, 190 |
| DpnI | GATC | 1 cut(s) | 276 |
| DpnII | GATC | 1 cut(s) | 274 |
| DraI | TTTAAA | 1 cut(s) | 244 |
| Eco57I | CTGAAG | 1 cut(s) | 192 |
| FaeI | CATG | 1 cut(s) | 212 |
| FaiI | YATR | 6 cut(s) | 21, 69, 77, 210, 273, 304 |
| FatI | CATG | 1 cut(s) | 208 |
| Fnu4HI | GCNGC | 2 cut(s) | 62, 180 |
| Fsp4HI | GCNGC | 2 cut(s) | 62, 180 |
| FspBI | CTAG | 3 cut(s) | 249, 278, 285 |
| GluI | GCNGC | 2 cut(s) | 62, 180 |
| Hin1II | CATG | 1 cut(s) | 212 |
| HinfI | GANTC | 1 cut(s) | 203 |
| Hpy188I | TCNGA | 1 cut(s) | 118 |
| Hpy188III | TCNNGA | 1 cut(s) | 278 |
| HpyAV | CCTTC | 2 cut(s) | 91, 242 |
| HpyCH4III | ACNGT | 2 cut(s) | 38, 91 |
| HpyCH4V | TGCA | 2 cut(s) | 71, 268 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 176, 265 |
| HpyF3I | CTNAG | 2 cut(s) | 14, 190 |
| Hsp92II | CATG | 1 cut(s) | 212 |
| Kzo9I | GATC | 1 cut(s) | 274 |
| LmnI | GCTCC | 1 cut(s) | 135 |
| LpnPI | CCDG | 4 cut(s) | 57, 96, 117, 245 |
| LweI | GCATC | 3 cut(s) | 110, 166, 271 |
| MaeI | CTAG | 3 cut(s) | 249, 278, 285 |
| MaeIII | GTNAC | 1 cut(s) | 32 |
| MalI | GATC | 1 cut(s) | 276 |
| MboI | GATC | 1 cut(s) | 274 |
| MboII | GAAGA | 1 cut(s) | 185 |
| MlyI | GAGTC | 1 cut(s) | 212 |
| MnlI | CCTC | 2 cut(s) | 196, 199 |
| MroXI | GAANNNNTTC | 1 cut(s) | 48 |
| MseI | TTAA | 1 cut(s) | 243 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 176, 265 |
| NdeII | GATC | 1 cut(s) | 274 |
| NlaIII | CATG | 1 cut(s) | 212 |
| NlaIV | GGNNCC | 1 cut(s) | 137 |
| PdmI | GAANNNNTTC | 1 cut(s) | 48 |
| PkrI | GCNGC | 2 cut(s) | 63, 181 |
| PleI | GAGTC | 1 cut(s) | 211 |
| PpsI | GAGTC | 1 cut(s) | 211 |
| PspN4I | GGNNCC | 1 cut(s) | 137 |
| RsaI | GTAC | 1 cut(s) | 6 |
| RsaNI | GTAC | 1 cut(s) | 5 |
| SaqAI | TTAA | 1 cut(s) | 243 |
| SatI | GCNGC | 2 cut(s) | 62, 180 |
| Sau3AI | GATC | 1 cut(s) | 274 |
| SchI | GAGTC | 1 cut(s) | 212 |
| SetI | ASST | 3 cut(s) | 126, 188, 200 |
| SfaNI | GCATC | 3 cut(s) | 110, 166, 271 |
| SmiI | ATTTAAAT | 1 cut(s) | 244 |
| SsiI | CCGC | 2 cut(s) | 62, 180 |
| SspI | AATATT | 1 cut(s) | 240 |
| SspMI | CTAG | 3 cut(s) | 249, 278, 285 |
| SwaI | ATTTAAAT | 1 cut(s) | 244 |
| TaaI | ACNGT | 2 cut(s) | 38, 91 |
| TauI | GCSGC | 2 cut(s) | 64, 182 |
| Tru1I | TTAA | 1 cut(s) | 243 |
| Tru9I | TTAA | 1 cut(s) | 243 |
| TspDTI | ATGAA | 1 cut(s) | 214 |
| XbaI | TCTAGA | 1 cut(s) | 277 |
| XmnI | GAANNNNTTC | 1 cut(s) | 48 |
| XspI | CTAG | 3 cut(s) | 249, 278, 285 |