WD repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD06G1065100.v1.1 |
| pyrus_communis | pycom04g07360 |
| rosa_chinensis | RchiOBHm_Chr2g0151271 |
| rosa_laevigata | RLG00000029209 RLG00000029405 |
| rosa_multiflora | Rmu_sc0003498.1_g000002 Rmu_sc0009409.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00017800 Rroxscaffold_1G00024970 Rroxscaffold_1G00030460 Rroxscaffold_2G00106410 Rroxscaffold_2G00133320 Rroxscaffold_3G00220170 Rroxscaffold_4G00313270 Rroxscaffold_5G00339850 Rroxscaffold_6G00418020 Rroxscaffold_7G00175880 |
| rosa_rugosa | Rorug01G0017700 Rorug05G0318400 Rorug07G0300800 |
| rosa_samantha | Rh1CG004700 Rh1CG043500 Rh1DG112600 Rh1DG195700 Rh2AG218100 Rh2AG300700 Rh2AG454300 Rh2AG454400 Rh2AG459600 Rh2AG581500 Rh2BG119400 Rh2BG123700 Rh2BG174600 Rh2BG524000 Rh2CG125300 Rh2CG441400 Rh2CG441500 Rh2DG120900 Rh2DG125900 Rh2DG297900 Rh2DG324900 Rh2DG339600 Rh3AG238400 Rh3BG207600 Rh5AG278100 Rh5AG507700 Rh5BG529200 Rh5CG324500 Rh7BG426800 Rh7BG450300 |
| rosa_wichuraiana | Rw5G015030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 20 |
| AciI | CCGC | 1 cut(s) | 441 |
| AcsI | RAATTY | 1 cut(s) | 218 |
| AcuI | CTGAAG | 1 cut(s) | 453 |
| AfaI | GTAC | 1 cut(s) | 372 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 333 |
| AgsI | TTSAA | 2 cut(s) | 29, 359 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 240, 272 |
| AluBI | AGCT | 3 cut(s) | 15, 130, 175 |
| AluI | AGCT | 3 cut(s) | 15, 130, 175 |
| Alw26I | GTCTC | 1 cut(s) | 471 |
| AoxI | GGCC | 1 cut(s) | 324 |
| ApeKI | GCWGC | 1 cut(s) | 399 |
| ApoI | RAATTY | 1 cut(s) | 218 |
| AspS9I | GGNCC | 1 cut(s) | 324 |
| AsuHPI | GGTGA | 1 cut(s) | 274 |
| AsuNHI | GCTAGC | 1 cut(s) | 130 |
| BbvI | GCAGC | 1 cut(s) | 411 |
| BccI | CCATC | 4 cut(s) | 83, 283, 398, 414 |
| BclI | TGATCA | 1 cut(s) | 168 |
| BcoDI | GTCTC | 1 cut(s) | 471 |
| BfaI | CTAG | 2 cut(s) | 131, 393 |
| BisI | GCNGC | 2 cut(s) | 400, 441 |
| BlsI | GCNGC | 2 cut(s) | 401, 442 |
| BmgT120I | GGNCC | 1 cut(s) | 324 |
| BmsI | GCATC | 3 cut(s) | 105, 372, 427 |
| BmtI | GCTAGC | 1 cut(s) | 134 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 240, 270 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 333 |
| BseGI | GGATG | 2 cut(s) | 120, 217 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 333 |
| BseXI | GCAGC | 1 cut(s) | 411 |
| BshFI | GGCC | 1 cut(s) | 326 |
| BsiWI | CGTACG | 1 cut(s) | 370 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 333 |
| BsmAI | GTCTC | 1 cut(s) | 471 |
| BsnI | GGCC | 1 cut(s) | 326 |
| Bsp143I | GATC | 1 cut(s) | 168 |
| BspACI | CCGC | 1 cut(s) | 441 |
| BspANI | GGCC | 1 cut(s) | 326 |
| BspOI | GCTAGC | 1 cut(s) | 134 |
| BssMI | GATC | 1 cut(s) | 168 |
| Bst6I | CTCTTC | 1 cut(s) | 104 |
| BstC8I | GCNNGC | 1 cut(s) | 132 |
| BstF5I | GGATG | 2 cut(s) | 120, 217 |
| BstKTI | GATC | 1 cut(s) | 171 |
| BstMAI | GTCTC | 1 cut(s) | 471 |
| BstMBI | GATC | 1 cut(s) | 168 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 437, 446 |
| BstV1I | GCAGC | 1 cut(s) | 411 |
| BsuRI | GGCC | 1 cut(s) | 326 |
| BtgZI | GCGATG | 1 cut(s) | 417 |
| BtsCI | GGATG | 2 cut(s) | 120, 217 |
| Cac8I | GCNNGC | 1 cut(s) | 132 |
| Cfr13I | GGNCC | 1 cut(s) | 324 |
| Csp6I | GTAC | 1 cut(s) | 371 |
| CviAII | CATG | 2 cut(s) | 136, 470 |
| CviJI | RGCY | 9 cut(s) | 15, 130, 134, 175, 188, 280, 326, 425, 431 |
| CviKI_1 | RGCY | 9 cut(s) | 15, 130, 134, 175, 188, 280, 326, 425, 431 |
| CviQI | GTAC | 1 cut(s) | 371 |
| DpnI | GATC | 1 cut(s) | 170 |
| DpnII | GATC | 1 cut(s) | 168 |
| Eam1104I | CTCTTC | 1 cut(s) | 104 |
| EarI | CTCTTC | 1 cut(s) | 104 |
| Eco57I | CTGAAG | 1 cut(s) | 453 |
| FaeI | CATG | 2 cut(s) | 139, 473 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 31 |
| FatI | CATG | 2 cut(s) | 135, 469 |
| FbaI | TGATCA | 1 cut(s) | 168 |
| Fnu4HI | GCNGC | 2 cut(s) | 400, 441 |
| FokI | GGATG | 2 cut(s) | 127, 224 |
| Fsp4HI | GCNGC | 2 cut(s) | 400, 441 |
| FspBI | CTAG | 2 cut(s) | 131, 393 |
| GluI | GCNGC | 2 cut(s) | 400, 441 |
| HaeIII | GGCC | 1 cut(s) | 326 |
| Hin1II | CATG | 2 cut(s) | 139, 473 |
| HindIII | AAGCTT | 1 cut(s) | 173 |
| HinfI | GANTC | 4 cut(s) | 89, 249, 265, 464 |
| HphI | GGTGA | 1 cut(s) | 274 |
| Hpy188I | TCNGA | 1 cut(s) | 103 |
| HpyAV | CCTTC | 1 cut(s) | 353 |
| HpyCH4V | TGCA | 2 cut(s) | 242, 299 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 437, 446 |
| Hsp92II | CATG | 2 cut(s) | 139, 473 |
| Ksp22I | TGATCA | 1 cut(s) | 168 |
| Kzo9I | GATC | 1 cut(s) | 168 |
| LmnI | GCTCC | 2 cut(s) | 12, 396 |
| LpnPI | CCDG | 1 cut(s) | 245 |
| Lsp1109I | GCAGC | 1 cut(s) | 411 |
| LweI | GCATC | 3 cut(s) | 105, 372, 427 |
| MaeI | CTAG | 2 cut(s) | 131, 393 |
| MaeIII | GTNAC | 1 cut(s) | 63 |
| MalI | GATC | 1 cut(s) | 170 |
| MboI | GATC | 1 cut(s) | 168 |
| MboII | GAAGA | 2 cut(s) | 121, 446 |
| MluCI | AATT | 2 cut(s) | 218, 341 |
| MlyI | GAGTC | 2 cut(s) | 258, 473 |
| MnlI | CCTC | 2 cut(s) | 82, 105 |
| MseI | TTAA | 4 cut(s) | 38, 162, 414, 496 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 437, 446 |
| NdeII | GATC | 1 cut(s) | 168 |
| NheI | GCTAGC | 1 cut(s) | 130 |
| NlaIII | CATG | 2 cut(s) | 139, 473 |
| NmeAIII | GCCGAG | 1 cut(s) | 430 |
| PfeI | GAWTC | 2 cut(s) | 89, 265 |
| Pfl23II | CGTACG | 1 cut(s) | 370 |
| PkrI | GCNGC | 2 cut(s) | 401, 442 |
| PleI | GAGTC | 2 cut(s) | 257, 472 |
| PpsI | GAGTC | 2 cut(s) | 257, 472 |
| PsiI | TTATAA | 1 cut(s) | 20 |
| PspLI | CGTACG | 1 cut(s) | 370 |
| PspPI | GGNCC | 1 cut(s) | 324 |
| RsaI | GTAC | 1 cut(s) | 372 |
| RsaNI | GTAC | 1 cut(s) | 371 |
| SaqAI | TTAA | 4 cut(s) | 38, 162, 414, 496 |
| SatI | GCNGC | 2 cut(s) | 400, 441 |
| Sau3AI | GATC | 1 cut(s) | 168 |
| Sau96I | GGNCC | 1 cut(s) | 324 |
| SchI | GAGTC | 2 cut(s) | 258, 473 |
| SetI | ASST | 8 cut(s) | 17, 74, 132, 159, 177, 298, 387, 460 |
| SfaNI | GCATC | 3 cut(s) | 105, 372, 427 |
| Sse9I | AATT | 2 cut(s) | 218, 341 |
| SsiI | CCGC | 1 cut(s) | 441 |
| SspI | AATATT | 1 cut(s) | 25 |
| SspMI | CTAG | 2 cut(s) | 131, 393 |
| TaqI | TCGA | 1 cut(s) | 378 |
| TasI | AATT | 2 cut(s) | 218, 341 |
| TauI | GCSGC | 1 cut(s) | 443 |
| TfiI | GAWTC | 2 cut(s) | 89, 265 |
| Tru1I | TTAA | 4 cut(s) | 38, 162, 414, 496 |
| Tru9I | TTAA | 4 cut(s) | 38, 162, 414, 496 |
| TseI | GCWGC | 1 cut(s) | 399 |
| TspDTI | ATGAA | 2 cut(s) | 333, 475 |
| TspGWI | ACGGA | 1 cut(s) | 195 |
| XapI | RAATTY | 1 cut(s) | 218 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 82 |
| XspI | CTAG | 2 cut(s) | 131, 393 |