Rorug01G0284600

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0002265
Physical Location & Seq
Reverse (-)
39885110 .. 39888241
3132 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0284600.1

Sequence Viewer

Length: 3003 bp
ATGCAATTGAACCATCCGAGACTCCAAGGGAATGAGACGGATAGGCTGGCATTGCTAGCAATCAAAGCTCAAATACAACACGATCCGAACCGGGTCACAAGCTCATGGAATGAAACCCTTCACTTTTGCCTGTGGCACGGCGTCACCTGCAGTCGACGACATCACCAAAGGGTGACGAAGCTGGAGCTGGGCTCTCAAGCTTTGGGGGGATCCATATCTCCACACATAGGAAATCTAAGCTTCTTAAGAGTGCTACATCTCCTGAACAATAGCTTCACTCATCAAATCCCTCCTCAAATTGGGCATTTGCATAGATTGCAGGTATTGCGTCTACTCAATAACTCATTTACTGGCACCATTCCTGCCAATATATCCAATTGCTTCGAACTCATCGTTCTCCGTCTTGGTAGAAACAATCTAGTGGGTCAAATTCCTCCCCAGCTCAGTTCCTTGTCAAAGCTTCGGACTTTTATTTTGGAATTCAACAATTTAACAGGAGAGATCCCTCCTTCTTTGGGGAACCTTTCGTCTCTTGAGATATTTGCTCTTCATGCTAATAACTTAGAAGGAAACATTCCTAGTTCTCTATGCCAGTTGAAAAGATTAACAGGTATCTATTTCGGATCAAATAGGTTATCTGGTATCATCCCTTCCTGCATTTACAACCTCTCTGGCATAGTTACTTTCGCTGTAGGAGGAAACCAAATTCAAGGAAGTCTTCCATCAAACTTGAGCAATGCTTTTCCCAACCTTCAAATGTTTTCCGTTGCCGACAATCAATTTACTGGGGCCATTCCTTCCTCAATATCCAAGGCAACAAATCTTGTGGTGTTTCAATGTTCGTCAAACAAACTCTCTGGACAGGTGCCAAATTTACGAAATCTTCATAACCTTATGTGGTTCGTTGTCATTGGTAATAATCTTGGAAGCAGTAAAGATGGTGACTTGAGTTTTGTTTCAGAATTGATCAATGCCACACGACTAACTCGGTTGGGGTTCAGCTTCAACAATTTTGGAGGCACGTTGCCCACATCAATATCCAATCTCTCAATCAATCTCCAAGGCCTTGCAATTGGAGAAAACCACCTACATGGAAGCATCCCAACTGGATTAGGGAATCTTGTCAACCTGCAAGCACTCGGTATGGAAGAAAACTCCTTCACAGGTAGCATCCCCACAAACATTGGGCAGCTTTCAGGGCTTGGGCGGTTGTTTCTTAACAACAACCAATTATCAGGGAGCATTCCATCTTCTCTTGGAAATTTAACATTGTTAACAGTTCTCCAATTGCAGGAAAATATTCTAGAGGGTAGCATCCCTTCCAGCCTAGGGAAATGCCACTGGTTAATCGAATTGGTTCTTTCTGGAAACAATCTGAATGGCACGATACCGCCCCAAGTTATTGGCCTCTCATCTTTATCAACAATTTTGGGATTGGATAGAAACCAATTGACTGGTTCACTTCCCATGGAAATTGGAAATTTGAAGAATCTAGGTAGACTGGACGTTTCTAACAACTTGTTATCAGGAGAACTTCCCAGTAGCCTCGGCAGTTGCCAGAGCTTAGAAATCCTGATCTTGCAGGGCAACTTCTTCTTGGGGGCCATTCCTTCATCTATGAAGGACTTGAGAGGGATTCGATATTTAGACCTTTCTCAAAACAATTTGTCAGGAGATATTCCACAGTTTTTCGAGCGCTTTGGAAACTTGGAGAATCTGAACCTATCCTTCAATCAGTTTTGGGGAGCAGTACCGACTGGCGGTGTCTTTAAGAATGCAAGTGCTACTTCAGTTGCTGGAAACACAAGACTCTGTGGCGGTATTGCTAATCTTCAACTTCCTGTGTGCAAGTCTAATGAGTCTAAAGGAGAAGGATTGTCTCGTAGAATGAAAGTAGTGATCTCTCTAGTTTTCGGGTTCATTGTGTTGGGACTGGCTGTGGTGCTCGCTCTATTAGTTTTTCTTTGTAAGAAAAGGGAAGAAACAGAATTAAACACTTTTGGGAACTCTATTTTGCAAGTTTCATATGCTACTCTTCTAAAAGCTACTGATGGCTTCTCTTCAGCTAATTTGATTGGTTTGGGTGCTTTTGGATATGTGTACAAAGGAATTCTTGAAGATGGTGTTATTGTTGCTGTGAAGGTGTTCAACATGTTGCATCGGGGAGCTTCTAAGAGTTTCATCTCTGAATGTGAGGCCTTGAGAAACATCATGCATCGAAATCTGGTCAAGATTCTAACTGCATGCTCGAGCATTGATTTCAGTGGCAATGACTTTAAGGCTCTTGTTTATGAATTCATGGACAATGGGAGCTTAGATGATTGGTTGCATCCATCCACTGGAAATGAAGAGCTAACAGAAGCACCCAAAAGTTTAAGTCTTGTTCAGAGGCTTGACATTGCCATTGATGTTGCTTCTGCATTGGATTATCTTCACAACCACTGTGGAACCCCAATAGTTCATTGTGATCTCAAGCCAAGTAACGTTCTTTTGGACAAAGAGTTGACTGGACATGTTTCTGACTTTGGGCTAGCAAGGTTTCTCACAGATTCAACCACGAGTGTTTCTGGAAATCAATCAAGCTCCATTGGAATTAGAGGATCAGTTGGTTATGCTGCTCCAGAGTATGGTATGGGAAGTGAGGTATCCACATACGGGGATGTCTACAGCTTTGGCATTCTTTTGTTAGAAATGTTTACGGGGAAGAGACCCACTGATCACATGTTCAGTGACAACTTGAATCTTCATAATTATGTGAAAACATCTCTCCCTCAAGGTGTTTCCCAGATTTCAGAATCACTACTTCTTCAAGAAGGCACCACCAACGTCGCTGAAGCTCAAAGGCACAGCCAATGGAGTGTAAAAGCACAGAAAACTGAAGAGTGCTTGACTTTGATACTTGGTATAGGAATTGCATGTTCTGTTCAATCCCCCATAAACAGAAAGGATATTAGTGATGTTGCATCTGAATTGCATTCAATTAGGGATAATCTTCTTGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1000

Amino Acids

108.06

Weight (kDa)

6.62

Isoelectric Point (pI)

35.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 12 - 51 2.4e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 54 - 159 1.2e-08 Leucine-rich repeat region
LRR_14 PF23598 367 - 433 5.6e-06 Leucine-rich repeat region
LRR_14 PF23598 477 - 574 1.1e-07 Leucine-rich repeat region
LRR_8 PF13855 521 - 580 1.9e-08 Leucine rich repeat
Pkinase PF00069 688 - 920 2.7e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 690 - 919 7e-38 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 155
Acc36I ACCTGC 3 cut(s) 155, 310, 1137
AccB1I GGYRCC 3 cut(s) 353, 865, 2816
AccB7I CCANNNNNTGG 2 cut(s) 2339, 2627
AccI GTMKAC 4 cut(s) 154, 331, 1498, 2664
AciI CCGC 4 cut(s) 1207, 1391, 1761, 1818
AclI AACGTT 1 cut(s) 2484
AclWI GGATC 6 cut(s) 77, 204, 217, 496, 631, 2608
AcsI RAATTY 8 cut(s) 429, 479, 705, 871, 1261, 1480, 2109, 2294
AcuI CTGAAG 4 cut(s) 1773, 2046, 2853, 2898
AcyI GRCGYC 1 cut(s) 141
AfaI GTAC 2 cut(s) 1752, 2102
AfeI AGCGCT 1 cut(s) 1697
AfiI CCNNNNNNNGG 9 cut(s) 227, 299, 515, 1291, 1329, 1760, 2339, 2627, 2655
AflII CTTAAG 1 cut(s) 244
AflIII ACRYGT 3 cut(s) 2151, 2512, 2721
Alw21I GWGCWC 1 cut(s) 1947
Alw26I GTCTC 5 cut(s) 13, 29, 534, 1884, 2701
AlwI GGATC 6 cut(s) 77, 204, 217, 496, 631, 2608
AlwNI CAGNNNCTG 1 cut(s) 1796
Ama87I CYCGRG 1 cut(s) 2248
Aor51HI AGCGCT 1 cut(s) 1697
AoxI GGCC 5 cut(s) 789, 1063, 1405, 1602, 2196
ApeKI GCWGC 2 cut(s) 1189, 2615
ApoI RAATTY 8 cut(s) 429, 479, 705, 871, 1261, 1480, 2109, 2294
ArsI GACNNNNNNTTYG 4 cut(s) 457, 489, 935, 967
Asp700I GAANNNNTTC 4 cut(s) 117, 1299, 1356, 2144
AspA2I CCTAGG 1 cut(s) 1327
AspLEI GCGC 1 cut(s) 1698
AspS9I GGNCC 2 cut(s) 789, 1602
AsuC2I CCSGG 1 cut(s) 92
AsuHPI GGTGA 4 cut(s) 136, 155, 184, 953
AsuII TTCGAA 1 cut(s) 384
AsuNHI GCTAGC 2 cut(s) 55, 2530
AvaI CYCGRG 1 cut(s) 2248
AvrII CCTAGG 1 cut(s) 1327
BamHI GGATCC 1 cut(s) 209
BanI GGYRCC 3 cut(s) 353, 865, 2816
BanII GRGCYC 1 cut(s) 194
BarI GAAGNNNNNNTAC 4 cut(s) 634, 666, 1303, 1335
BauI CACGAG 1 cut(s) 2557
BbsI GAAGAC 1 cut(s) 710
Bbv12I GWGCWC 1 cut(s) 1947
BbvI GCAGC 2 cut(s) 1201, 2602
BccI CCATC 7 cut(s) 21, 730, 932, 1255, 2045, 2114, 2341
BceAI ACGGC 1 cut(s) 154
BciVI GTATCC 1 cut(s) 2656
BclI TGATCA 2 cut(s) 966, 2716
BcnI CCSGG 1 cut(s) 92
BcoDI GTCTC 5 cut(s) 13, 29, 534, 1884, 2701
BfaI CTAG 9 cut(s) 56, 419, 579, 1304, 1328, 1493, 1907, 2531, 3001
BfmI CTRYAG 3 cut(s) 148, 690, 2665
BfoI RGCGCY 1 cut(s) 1699
BfrI CTTAAG 1 cut(s) 244
BfuAI ACCTGC 3 cut(s) 155, 310, 1137
BfuI GTATCC 1 cut(s) 2656
BisI GCNGC 2 cut(s) 1190, 2616
BlnI CCTAGG 1 cut(s) 1327
BlsI GCNGC 2 cut(s) 1191, 2617
Bme1390I CCNGG 1 cut(s) 92
BmeT110I CYCGRG 1 cut(s) 2248
BmgT120I GGNCC 2 cut(s) 789, 1602
BmiI GGNNCC 8 cut(s) 211, 355, 521, 790, 867, 1603, 2449, 2818
BmrFI CCNGG 1 cut(s) 92
BmrI ACTGGG 2 cut(s) 795, 1533
BmsI GCATC 7 cut(s) 1107, 1179, 1323, 2167, 2224, 2338, 2972
BmtI GCTAGC 2 cut(s) 59, 2534
BmuI ACTGGG 2 cut(s) 795, 1533
BpiI GAAGAC 1 cut(s) 710
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 2 cut(s) 203, 2604
Bpu14I TTCGAA 1 cut(s) 384
BpuEI CTTGAG 8 cut(s) 180, 554, 751, 967, 1648, 2221, 2456, 2757
BpuMI CCSGG 1 cut(s) 92
BsaBI GATNNNNATC 1 cut(s) 214
BsaHI GRCGYC 1 cut(s) 141
BsaI GGTCTC 1 cut(s) 2701
BsaJI CCNNGG 6 cut(s) 25, 810, 1060, 1327, 1467, 1546
Bsc4I CCNNNNNNNGG 9 cut(s) 227, 299, 515, 1291, 1329, 1760, 2339, 2627, 2655
Bse3DI GCAATG 4 cut(s) 50, 742, 2275, 2397
Bse8I GATNNNNATC 1 cut(s) 214
BseDI CCNNGG 6 cut(s) 25, 810, 1060, 1327, 1467, 1546
BseGI GGATG 8 cut(s) 13, 645, 1098, 1170, 1314, 2329, 2333, 2665
BseJI GATNNNNATC 1 cut(s) 214
BseLI CCNNNNNNNGG 9 cut(s) 227, 299, 515, 1291, 1329, 1760, 2339, 2627, 2655
BseMI GCAATG 4 cut(s) 50, 742, 2275, 2397
BseMII CTCAG 1 cut(s) 457
BseRI GAGGAG 1 cut(s) 282
BseXI GCAGC 2 cut(s) 1201, 2602
BseYI CCCAGC 2 cut(s) 187, 438
BshFI GGCC 5 cut(s) 791, 1065, 1407, 1604, 2198
BshNI GGYRCC 3 cut(s) 353, 865, 2816
BsiHKAI GWGCWC 1 cut(s) 1947
BsiHKCI CYCGRG 1 cut(s) 2248
BsiSI CCGG 1 cut(s) 91
BslFI GGGAC 1 cut(s) 1944
BslI CCNNNNNNNGG 9 cut(s) 227, 299, 515, 1291, 1329, 1760, 2339, 2627, 2655
BsmAI GTCTC 5 cut(s) 13, 29, 534, 1884, 2701
BsmBI CGTCTC 2 cut(s) 29, 534
BsmFI GGGAC 1 cut(s) 1944
BsmI GAATGC 4 cut(s) 1242, 1780, 2676, 2974
BsnI GGCC 5 cut(s) 791, 1065, 1407, 1604, 2198
Bso31I GGTCTC 1 cut(s) 2701
BsoBI CYCGRG 1 cut(s) 2248
Bsp119I TTCGAA 1 cut(s) 384
Bsp1286I GDGCHC 2 cut(s) 194, 1947
Bsp1407I TGTACA 1 cut(s) 2100
Bsp19I CCATGG 1 cut(s) 1467
BspACI CCGC 4 cut(s) 1207, 1391, 1761, 1818
BspANI GGCC 5 cut(s) 791, 1065, 1407, 1604, 2198
BspCNI CTCAG 1 cut(s) 456
BspLI GGNNCC 8 cut(s) 211, 355, 521, 790, 867, 1603, 2449, 2818
BspMAI CTGCAG 1 cut(s) 152
BspMI ACCTGC 3 cut(s) 155, 310, 1137
BspOI GCTAGC 2 cut(s) 59, 2534
BspPI GGATC 6 cut(s) 77, 204, 217, 496, 631, 2608
BspQI GCTCTTC 2 cut(s) 552, 2343
BspT104I TTCGAA 1 cut(s) 384
BspT107I GGYRCC 3 cut(s) 353, 865, 2816
BspTI CTTAAG 1 cut(s) 244
BspTNI GGTCTC 1 cut(s) 2701
BsrDI GCAATG 4 cut(s) 50, 742, 2275, 2397
BsrGI TGTACA 1 cut(s) 2100
BssECI CCNNGG 6 cut(s) 25, 810, 1060, 1327, 1467, 1546
BssNI GRCGYC 1 cut(s) 141
BssSI CACGAG 1 cut(s) 2557
BssT1I CCWWGG 5 cut(s) 25, 810, 1060, 1327, 1467
Bst2BI CACGAG 1 cut(s) 2557
Bst4CI ACNGT 3 cut(s) 1279, 1686, 2444
Bst6I CTCTTC 6 cut(s) 552, 2040, 2065, 2343, 2699, 2874
BstACI GRCGYC 1 cut(s) 141
BstAFI CTTAAG 1 cut(s) 244
BstAPI GCANNNNNTGC 2 cut(s) 316, 325
BstAUI TGTACA 1 cut(s) 2100
BstBI TTCGAA 1 cut(s) 384
BstC8I GCNNGC 6 cut(s) 48, 57, 1134, 1947, 2245, 2532
BstDEI CTNAG 6 cut(s) 236, 443, 562, 1564, 2172, 2314
BstDSI CCRYGG 1 cut(s) 1467
BstF5I GGATG 8 cut(s) 13, 645, 1098, 1170, 1314, 2329, 2333, 2665
BstH2I RGCGCY 1 cut(s) 1699
BstHHI GCGC 1 cut(s) 1698
BstMAI GTCTC 5 cut(s) 13, 29, 534, 1884, 2701
BstMWI GCNNNNNNNGC 8 cut(s) 52, 56, 65, 147, 316, 325, 551, 1198
BstNSI RCATGY 5 cut(s) 2155, 2247, 2516, 2725, 2919
BstSCI CCNGG 1 cut(s) 90
BstSFI CTRYAG 3 cut(s) 148, 690, 2665
BstV1I GCAGC 2 cut(s) 1201, 2602
BstV2I GAAGAC 1 cut(s) 710
BstX2I RGATCY 2 cut(s) 209, 501
BstXI CCANNNNNNTGG 3 cut(s) 1091, 1403, 1454
BstYI RGATCY 2 cut(s) 209, 501
BsuI GTATCC 1 cut(s) 2656
BsuRI GGCC 5 cut(s) 791, 1065, 1407, 1604, 2198
BtgI CCRYGG 1 cut(s) 1467
BtsCI GGATG 8 cut(s) 13, 645, 1098, 1170, 1314, 2329, 2333, 2665
BtsIMutI CAGTG 6 cut(s) 1339, 2269, 2337, 2440, 2712, 2734
BveI ACCTGC 3 cut(s) 155, 310, 1137
Cac8I GCNNGC 6 cut(s) 48, 57, 1134, 1947, 2245, 2532
CaiI CAGNNNCTG 1 cut(s) 1796
CfoI GCGC 1 cut(s) 1698
Cfr13I GGNCC 2 cut(s) 789, 1602
CseI GACGC 2 cut(s) 130, 317
Csp6I GTAC 2 cut(s) 1751, 2101
CspCI CAANNNNNGTGG 6 cut(s) 807, 842, 1165, 1200, 2425, 2460
CviQI GTAC 2 cut(s) 1751, 2101
DdeI CTNAG 6 cut(s) 236, 443, 562, 1564, 2172, 2314
Eam1104I CTCTTC 6 cut(s) 552, 2040, 2065, 2343, 2699, 2874
EarI CTCTTC 6 cut(s) 552, 2040, 2065, 2343, 2699, 2874
Eco130I CCWWGG 5 cut(s) 25, 810, 1060, 1327, 1467
Eco147I AGGCCT 2 cut(s) 1065, 2198
Eco24I GRGCYC 1 cut(s) 194
Eco31I GGTCTC 1 cut(s) 2701
Eco47III AGCGCT 1 cut(s) 1697
Eco57I CTGAAG 4 cut(s) 1773, 2046, 2853, 2898
Eco88I CYCGRG 1 cut(s) 2248
EcoRI GAATTC 3 cut(s) 479, 2109, 2294
EcoT14I CCWWGG 5 cut(s) 25, 810, 1060, 1327, 1467
EcoT22I ATGCAT 1 cut(s) 2217
EcoT38I GRGCYC 1 cut(s) 194
ErhI CCWWGG 5 cut(s) 25, 810, 1060, 1327, 1467
Esp3I CGTCTC 2 cut(s) 29, 534
FalI AAGNNNNNCTT 6 cut(s) 702, 734, 1771, 1803, 2097, 2129
FaqI GGGAC 1 cut(s) 1944
FauNDI CATATG 1 cut(s) 2026
FbaI TGATCA 2 cut(s) 966, 2716
FblI GTMKAC 4 cut(s) 154, 331, 1498, 2664
Fnu4HI GCNGC 2 cut(s) 1190, 2616
FokI GGATG 7 cut(s) 632, 1085, 1157, 1301, 2316, 2320, 2672
FriOI GRGCYC 1 cut(s) 194
Fsp4HI GCNGC 2 cut(s) 1190, 2616
FspBI CTAG 9 cut(s) 56, 419, 579, 1304, 1328, 1493, 1907, 2531, 3001
GlaI GCGC 1 cut(s) 1697
GluI GCNGC 2 cut(s) 1190, 2616
GsaI CCCAGC 2 cut(s) 191, 442
GsuI CTGGAG 2 cut(s) 203, 2604
HaeII RGCGCY 1 cut(s) 1699
HaeIII GGCC 5 cut(s) 791, 1065, 1407, 1604, 2198
HapII CCGG 1 cut(s) 91
HgaI GACGC 2 cut(s) 130, 317
HhaI GCGC 1 cut(s) 1698
Hin1I GRCGYC 1 cut(s) 141
Hin6I GCGC 1 cut(s) 1696
HinP1I GCGC 1 cut(s) 1696
HincII GTYRAC 4 cut(s) 155, 1126, 1275, 2505
HindII GTYRAC 4 cut(s) 155, 1126, 1275, 2505
HindIII AAGCTT 3 cut(s) 198, 238, 458
HpaI GTTAAC 1 cut(s) 1275
HpaII CCGG 1 cut(s) 91
HphI GGTGA 4 cut(s) 136, 155, 184, 953
Hpy99I CGWCG 2 cut(s) 159, 2831
HpyCH4III ACNGT 3 cut(s) 1279, 1686, 2444
HpyCH4IV ACGT 4 cut(s) 1022, 1506, 2484, 2826
HpyF10VI GCNNNNNNNGC 8 cut(s) 52, 56, 65, 147, 316, 325, 551, 1198
HpyF3I CTNAG 6 cut(s) 236, 443, 562, 1564, 2172, 2314
HpySE526I ACGT 4 cut(s) 1022, 1506, 2484, 2826
Hsp92I GRCGYC 1 cut(s) 141
HspAI GCGC 1 cut(s) 1696
Ksp22I TGATCA 2 cut(s) 966, 2716
KspAI GTTAAC 1 cut(s) 1275
LguI GCTCTTC 2 cut(s) 552, 2343
LmnI GCTCC 7 cut(s) 184, 1239, 1745, 2165, 2310, 2588, 2623
Lsp1109I GCAGC 2 cut(s) 1201, 2602
LweI GCATC 7 cut(s) 1107, 1179, 1323, 2167, 2224, 2338, 2972
MaeI CTAG 9 cut(s) 56, 419, 579, 1304, 1328, 1493, 1907, 2531, 3001
MaeII ACGT 4 cut(s) 1022, 1506, 2484, 2826
MaeIII GTNAC 7 cut(s) 94, 142, 172, 679, 941, 2480, 2729
MfeI CAATTG 5 cut(s) 5, 376, 1071, 1286, 1448
MflI RGATCY 2 cut(s) 209, 501
MhlI GDGCHC 2 cut(s) 194, 1947
MlyI GAGTC 3 cut(s) 15, 1803, 1868
Mph1103I ATGCAT 1 cut(s) 2217
MroXI GAANNNNTTC 4 cut(s) 117, 1299, 1356, 2144
MslI CAYNNNNRTG 2 cut(s) 1089, 2751
MspCI CTTAAG 1 cut(s) 244
MspI CCGG 1 cut(s) 91
MspR9I CCNGG 1 cut(s) 92
MunI CAATTG 5 cut(s) 5, 376, 1071, 1286, 1448
Mva1269I GAATGC 4 cut(s) 1242, 1780, 2676, 2974
MwoI GCNNNNNNNGC 8 cut(s) 52, 56, 65, 147, 316, 325, 551, 1198
NciI CCSGG 1 cut(s) 92
NcoI CCATGG 1 cut(s) 1467
NdeI CATATG 1 cut(s) 2026
NheI GCTAGC 2 cut(s) 55, 2530
NlaIV GGNNCC 8 cut(s) 211, 355, 521, 790, 867, 1603, 2449, 2818
NmeAIII GCCGAG 1 cut(s) 1527
NmuCI GTSAC 5 cut(s) 94, 142, 172, 941, 2729
NsiI ATGCAT 1 cut(s) 2217
NspI RCATGY 5 cut(s) 2155, 2247, 2516, 2725, 2919
NspV TTCGAA 1 cut(s) 384
PaeI GCATGC 1 cut(s) 2247
PaeR7I CTCGAG 1 cut(s) 2248
PaqCI CACCTGC 1 cut(s) 155
PceI AGGCCT 2 cut(s) 1065, 2198
PciI ACATGT 3 cut(s) 2151, 2512, 2721
PciSI GCTCTTC 2 cut(s) 552, 2343
PcsI WCGNNNNNNNCGW 1 cut(s) 390
PctI GAATGC 4 cut(s) 1242, 1780, 2676, 2974
PdmI GAANNNNTTC 4 cut(s) 117, 1299, 1356, 2144
PfeI GAWTC 8 cut(s) 1117, 1489, 1636, 1714, 2233, 2549, 2740, 2795
PflMI CCANNNNNTGG 2 cut(s) 2339, 2627
PkrI GCNGC 2 cut(s) 1191, 2617
PleI GAGTC 3 cut(s) 15, 1803, 1867
PpsI GAGTC 3 cut(s) 15, 1803, 1867
PscI ACATGT 3 cut(s) 2151, 2512, 2721
Psp1406I AACGTT 1 cut(s) 2484
PspFI CCCAGC 2 cut(s) 187, 438
PspN4I GGNNCC 8 cut(s) 211, 355, 521, 790, 867, 1603, 2449, 2818
PspPI GGNCC 2 cut(s) 789, 1602
PspXI VCTCGAGB 1 cut(s) 2248
PstI CTGCAG 1 cut(s) 152
PstNI CAGNNNCTG 1 cut(s) 1796
PsuI RGATCY 2 cut(s) 209, 501
RsaI GTAC 2 cut(s) 1752, 2102
RsaNI GTAC 2 cut(s) 1751, 2101
RseI CAYNNNNRTG 2 cut(s) 1089, 2751
SalI GTCGAC 1 cut(s) 153
SapI GCTCTTC 2 cut(s) 552, 2343
SatI GCNGC 2 cut(s) 1190, 2616
Sau96I GGNCC 2 cut(s) 789, 1602
SchI GAGTC 3 cut(s) 15, 1803, 1868
ScrFI CCNGG 1 cut(s) 92
SduI GDGCHC 2 cut(s) 194, 1947
SfaNI GCATC 7 cut(s) 1107, 1179, 1323, 2167, 2224, 2338, 2972
SfcI CTRYAG 3 cut(s) 148, 690, 2665
Sfr274I CTCGAG 1 cut(s) 2248
SfuI TTCGAA 1 cut(s) 384
SlaI CTCGAG 1 cut(s) 2248
SmiMI CAYNNNNRTG 2 cut(s) 1089, 2751
SphI GCATGC 1 cut(s) 2247
SseBI AGGCCT 2 cut(s) 1065, 2198
SsiI CCGC 4 cut(s) 1207, 1391, 1761, 1818
SspI AATATT 1 cut(s) 1300
SspMI CTAG 9 cut(s) 56, 419, 579, 1304, 1328, 1493, 1907, 2531, 3001
StuI AGGCCT 2 cut(s) 1065, 2198
StyD4I CCNGG 1 cut(s) 90
StyI CCWWGG 5 cut(s) 25, 810, 1060, 1327, 1467
TaaI ACNGT 3 cut(s) 1279, 1686, 2444
TaiI ACGT 4 cut(s) 1025, 1509, 2487, 2829
TaqI TCGA 7 cut(s) 154, 384, 1350, 1639, 1692, 2218, 2249
TatI WGTACW 1 cut(s) 2100
TfiI GAWTC 8 cut(s) 1117, 1489, 1636, 1714, 2233, 2549, 2740, 2795
TscAI CASTG 6 cut(s) 1346, 2269, 2344, 2447, 2719, 2734
TseFI GTSAC 5 cut(s) 94, 142, 172, 941, 2729
TseI GCWGC 2 cut(s) 1189, 2615
Tsp45I GTSAC 5 cut(s) 94, 142, 172, 941, 2729
TspGWI ACGGA 3 cut(s) 53, 389, 754
TspRI CASTG 6 cut(s) 1346, 2269, 2344, 2447, 2719, 2734
Van91I CCANNNNNTGG 2 cut(s) 2339, 2627
Vha464I CTTAAG 1 cut(s) 244
XapI RAATTY 8 cut(s) 429, 479, 705, 871, 1261, 1480, 2109, 2294
XbaI TCTAGA 1 cut(s) 1303
XceI RCATGY 5 cut(s) 2155, 2247, 2516, 2725, 2919
XhoI CTCGAG 1 cut(s) 2248
XmaJI CCTAGG 1 cut(s) 1327
XmiI GTMKAC 4 cut(s) 154, 331, 1498, 2664
XmnI GAANNNNTTC 4 cut(s) 117, 1299, 1356, 2144
XspI CTAG 9 cut(s) 56, 419, 579, 1304, 1328, 1493, 1907, 2531, 3001
Zsp2I ATGCAT 1 cut(s) 2217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.