Rh3CG320700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
Physical Location & Seq
Reverse (-)
34392685 .. 34406055
13371 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG320700.1

Sequence Viewer

Length: 411 bp
ATGGCTATATTTGAGAGTGAAGAGGAGCTCCTAATTTCATTTGCTTGTGCAAACCCTAGAGCAATTGTTAATCACCAATCTCACTCTCCTCCTCACAATGCTATCTATGGTTGCATCAGTTTACAAAGCCCCAAAGCCAAGAAGAAGAACAAGGTGGTATTCTACTTCAAAGGTCAACGATTTCACTGTCTTCATGGGCCTCAACAAGTTCTAGAACGAGGAGCTCATCAAATATGGCTTCCCCGAAGACATTTGGCAACCATTTGTGACATAGTAACTCTAAGTTTGCCTTATCTATTGAACCTGAGAATGAGGCACTTCAGTCCTAAGCAGCTCGTGTCACACATCTTCGCAGCAAAGGCGTGCCTACGCTTCTTGCTTGTGTCATTTTGTCATGTTGCTCATGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

136

Amino Acids

15.52

Weight (kDa)

9.74

Isoelectric Point (pI)

66.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 304
AgsI TTSAA 2 cut(s) 169, 301
AluBI AGCT 3 cut(s) 28, 224, 334
AluI AGCT 3 cut(s) 28, 224, 334
Alw21I GWGCWC 2 cut(s) 30, 226
AoxI GGCC 1 cut(s) 197
ApeKI GCWGC 2 cut(s) 331, 353
AspS9I GGNCC 1 cut(s) 197
AsuHPI GGTGA 1 cut(s) 65
BanII GRGCYC 2 cut(s) 30, 226
BauI CACGAG 1 cut(s) 335
BbsI GAAGAC 2 cut(s) 182, 253
Bbv12I GWGCWC 2 cut(s) 30, 226
BbvI GCAGC 2 cut(s) 343, 365
BfaI CTAG 2 cut(s) 57, 212
BisI GCNGC 2 cut(s) 332, 354
BlsI GCNGC 2 cut(s) 333, 355
BmgT120I GGNCC 1 cut(s) 197
BmsI GCATC 1 cut(s) 123
BpiI GAAGAC 2 cut(s) 182, 253
Bpu10I CCTNAGC 1 cut(s) 327
BseMII CTCAG 1 cut(s) 296
BseRI GAGGAG 4 cut(s) 38, 78, 81, 234
BseXI GCAGC 2 cut(s) 343, 365
BshFI GGCC 1 cut(s) 199
BsiHKAI GWGCWC 2 cut(s) 30, 226
BsnI GGCC 1 cut(s) 199
Bsp1286I GDGCHC 2 cut(s) 30, 226
BspANI GGCC 1 cut(s) 199
BspCNI CTCAG 1 cut(s) 297
BssSI CACGAG 1 cut(s) 335
Bst2BI CACGAG 1 cut(s) 335
Bst4CI ACNGT 1 cut(s) 188
Bst6I CTCTTC 1 cut(s) 15
BstC8I GCNNGC 1 cut(s) 364
BstDEI CTNAG 3 cut(s) 281, 305, 327
BstMWI GCNNNNNNNGC 1 cut(s) 359
BstV1I GCAGC 2 cut(s) 343, 365
BstV2I GAAGAC 2 cut(s) 182, 253
BsuRI GGCC 1 cut(s) 199
BtsIMutI CAGTG 1 cut(s) 184
Cac8I GCNNGC 1 cut(s) 364
Cfr13I GGNCC 1 cut(s) 197
CviAII CATG 3 cut(s) 194, 395, 404
CviJI RGCY 8 cut(s) 5, 28, 129, 137, 199, 224, 238, 334
CviKI_1 RGCY 8 cut(s) 5, 28, 129, 137, 199, 224, 238, 334
DdeI CTNAG 3 cut(s) 281, 305, 327
Eam1104I CTCTTC 1 cut(s) 15
EarI CTCTTC 1 cut(s) 15
Ecl136II GAGCTC 2 cut(s) 28, 224
Eco24I GRGCYC 2 cut(s) 30, 226
Eco53kI GAGCTC 2 cut(s) 28, 224
Eco57I CTGAAG 1 cut(s) 304
EcoICRI GAGCTC 2 cut(s) 28, 224
EcoT38I GRGCYC 2 cut(s) 30, 226
FaeI CATG 3 cut(s) 197, 398, 407
FaiI YATR 7 cut(s) 8, 108, 195, 235, 272, 396, 405
FalI AAGNNNNNCTT 2 cut(s) 274, 306
FatI CATG 3 cut(s) 193, 394, 403
Fnu4HI GCNGC 2 cut(s) 332, 354
FriOI GRGCYC 2 cut(s) 30, 226
Fsp4HI GCNGC 2 cut(s) 332, 354
FspBI CTAG 2 cut(s) 57, 212
GluI GCNGC 2 cut(s) 332, 354
HaeIII GGCC 1 cut(s) 199
Hin1II CATG 3 cut(s) 197, 398, 407
HincII GTYRAC 1 cut(s) 176
HindII GTYRAC 1 cut(s) 176
HphI GGTGA 1 cut(s) 65
Hpy166II GTNNAC 2 cut(s) 122, 176
Hpy188III TCNNGA 1 cut(s) 212
Hpy8I GTNNAC 2 cut(s) 122, 176
HpyCH4III ACNGT 1 cut(s) 188
HpyCH4V TGCA 2 cut(s) 50, 114
HpyF10VI GCNNNNNNNGC 1 cut(s) 359
HpyF3I CTNAG 3 cut(s) 281, 305, 327
Hsp92II CATG 3 cut(s) 197, 398, 407
LmnI GCTCC 3 cut(s) 25, 33, 221
LpnPI CCDG 1 cut(s) 317
Lsp1109I GCAGC 2 cut(s) 343, 365
LweI GCATC 1 cut(s) 123
MaeI CTAG 2 cut(s) 57, 212
MaeIII GTNAC 3 cut(s) 266, 274, 339
MboII GAAGA 6 cut(s) 32, 154, 157, 182, 258, 340
MfeI CAATTG 1 cut(s) 63
MhlI GDGCHC 2 cut(s) 30, 226
MluCI AATT 2 cut(s) 33, 63
MnlI CCTC 6 cut(s) 16, 99, 102, 210, 212, 306
MseI TTAA 1 cut(s) 69
MunI CAATTG 1 cut(s) 63
MwoI GCNNNNNNNGC 1 cut(s) 359
NlaIII CATG 3 cut(s) 197, 398, 407
NmuCI GTSAC 2 cut(s) 266, 339
PkrI GCNGC 2 cut(s) 333, 355
Psp124BI GAGCTC 2 cut(s) 30, 226
PspPI GGNCC 1 cut(s) 197
SacI GAGCTC 2 cut(s) 30, 226
SaqAI TTAA 1 cut(s) 69
SatI GCNGC 2 cut(s) 332, 354
Sau96I GGNCC 1 cut(s) 197
SduI GDGCHC 2 cut(s) 30, 226
SetI ASST 6 cut(s) 30, 156, 175, 226, 306, 336
SfaNI GCATC 1 cut(s) 123
Sse9I AATT 2 cut(s) 33, 63
SspMI CTAG 2 cut(s) 57, 212
SstI GAGCTC 2 cut(s) 30, 226
TaaI ACNGT 1 cut(s) 188
TasI AATT 2 cut(s) 33, 63
Tru1I TTAA 1 cut(s) 69
Tru9I TTAA 1 cut(s) 69
TscAI CASTG 1 cut(s) 191
TseFI GTSAC 2 cut(s) 266, 339
TseI GCWGC 2 cut(s) 331, 353
Tsp45I GTSAC 2 cut(s) 266, 339
TspDTI ATGAA 2 cut(s) 27, 182
TspRI CASTG 1 cut(s) 191
XbaI TCTAGA 1 cut(s) 211
XspI CTAG 2 cut(s) 57, 212
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.