Zinc finger protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 2 cut(s) | 247, 460 |
| AccII | CGCG | 1 cut(s) | 144 |
| AcoI | YGGCCR | 3 cut(s) | 70, 207, 369 |
| AcsI | RAATTY | 3 cut(s) | 302, 358, 454 |
| AcyI | GRCGYC | 1 cut(s) | 248 |
| AfaI | GTAC | 1 cut(s) | 485 |
| AfeI | AGCGCT | 1 cut(s) | 321 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 293 |
| AflIII | ACRYGT | 1 cut(s) | 134 |
| AgsI | TTSAA | 4 cut(s) | 302, 406, 442, 454 |
| AluBI | AGCT | 1 cut(s) | 235 |
| AluI | AGCT | 1 cut(s) | 235 |
| Alw26I | GTCTC | 1 cut(s) | 334 |
| Aor51HI | AGCGCT | 1 cut(s) | 321 |
| AoxI | GGCC | 4 cut(s) | 70, 172, 207, 369 |
| ApeKI | GCWGC | 3 cut(s) | 55, 386, 389 |
| ApoI | RAATTY | 3 cut(s) | 302, 358, 454 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 104, 136 |
| AspLEI | GCGC | 2 cut(s) | 250, 322 |
| AsuC2I | CCSGG | 1 cut(s) | 468 |
| AsuHPI | GGTGA | 1 cut(s) | 249 |
| BaeGI | GKGCMC | 1 cut(s) | 287 |
| BalI | TGGCCA | 1 cut(s) | 72 |
| BanI | GGYRCC | 2 cut(s) | 247, 460 |
| BauI | CACGAG | 1 cut(s) | 278 |
| BbvI | GCAGC | 3 cut(s) | 42, 398, 401 |
| BceAI | ACGGC | 1 cut(s) | 377 |
| BcnI | CCSGG | 1 cut(s) | 468 |
| BcoDI | GTCTC | 1 cut(s) | 334 |
| BfoI | RGCGCY | 2 cut(s) | 251, 323 |
| BisI | GCNGC | 3 cut(s) | 56, 387, 390 |
| BlsI | GCNGC | 3 cut(s) | 57, 388, 391 |
| Bme1390I | CCNGG | 1 cut(s) | 468 |
| BmiI | GGNNCC | 3 cut(s) | 217, 249, 462 |
| BmrFI | CCNGG | 1 cut(s) | 468 |
| BmsI | GCATC | 1 cut(s) | 42 |
| BpuMI | CCSGG | 1 cut(s) | 468 |
| BsaHI | GRCGYC | 1 cut(s) | 248 |
| BsaJI | CCNNGG | 2 cut(s) | 30, 166 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 293 |
| Bse118I | RCCGGY | 3 cut(s) | 209, 259, 397 |
| BseDI | CCNNGG | 2 cut(s) | 30, 166 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 293 |
| BseMII | CTCAG | 1 cut(s) | 254 |
| BseRI | GAGGAG | 1 cut(s) | 352 |
| BseSI | GKGCMC | 1 cut(s) | 287 |
| BseX3I | CGGCCG | 1 cut(s) | 369 |
| BseXI | GCAGC | 3 cut(s) | 42, 398, 401 |
| Bsh1236I | CGCG | 1 cut(s) | 144 |
| Bsh1285I | CGRYCG | 2 cut(s) | 372, 376 |
| BshFI | GGCC | 4 cut(s) | 72, 174, 209, 371 |
| BshNI | GGYRCC | 2 cut(s) | 247, 460 |
| BsiEI | CGRYCG | 2 cut(s) | 372, 376 |
| BsiSI | CCGG | 4 cut(s) | 210, 260, 398, 468 |
| BslFI | GGGAC | 2 cut(s) | 70, 362 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 293 |
| BsmAI | GTCTC | 1 cut(s) | 334 |
| BsmFI | GGGAC | 2 cut(s) | 70, 362 |
| BsnI | GGCC | 4 cut(s) | 72, 174, 209, 371 |
| Bsp1286I | GDGCHC | 1 cut(s) | 287 |
| Bsp143I | GATC | 1 cut(s) | 373 |
| Bsp19I | CCATGG | 1 cut(s) | 30 |
| Bsp68I | TCGCGA | 1 cut(s) | 144 |
| BspANI | GGCC | 4 cut(s) | 72, 174, 209, 371 |
| BspCNI | CTCAG | 1 cut(s) | 253 |
| BspFNI | CGCG | 1 cut(s) | 144 |
| BspLI | GGNNCC | 3 cut(s) | 217, 249, 462 |
| BspT107I | GGYRCC | 2 cut(s) | 247, 460 |
| BsrFI | RCCGGY | 3 cut(s) | 209, 259, 397 |
| BssAI | RCCGGY | 3 cut(s) | 209, 259, 397 |
| BssECI | CCNNGG | 2 cut(s) | 30, 166 |
| BssMI | GATC | 1 cut(s) | 373 |
| BssNI | GRCGYC | 1 cut(s) | 248 |
| BssSI | CACGAG | 1 cut(s) | 278 |
| BssT1I | CCWWGG | 1 cut(s) | 30 |
| Bst2BI | CACGAG | 1 cut(s) | 278 |
| Bst4CI | ACNGT | 1 cut(s) | 116 |
| BstACI | GRCGYC | 1 cut(s) | 248 |
| BstC8I | GCNNGC | 3 cut(s) | 184, 237, 318 |
| BstDEI | CTNAG | 1 cut(s) | 240 |
| BstDSI | CCRYGG | 1 cut(s) | 30 |
| BstFNI | CGCG | 1 cut(s) | 144 |
| BstH2I | RGCGCY | 2 cut(s) | 251, 323 |
| BstHHI | GCGC | 2 cut(s) | 250, 322 |
| BstKTI | GATC | 1 cut(s) | 376 |
| BstMAI | GTCTC | 1 cut(s) | 334 |
| BstMBI | GATC | 1 cut(s) | 373 |
| BstMCI | CGRYCG | 2 cut(s) | 372, 376 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 215, 245 |
| BstNSI | RCATGY | 1 cut(s) | 138 |
| BstSCI | CCNGG | 1 cut(s) | 466 |
| BstSLI | GKGCMC | 1 cut(s) | 287 |
| BstUI | CGCG | 1 cut(s) | 144 |
| BstV1I | GCAGC | 3 cut(s) | 42, 398, 401 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 37 |
| BstZI | CGGCCG | 1 cut(s) | 369 |
| BsuRI | GGCC | 4 cut(s) | 72, 174, 209, 371 |
| BtgI | CCRYGG | 1 cut(s) | 30 |
| BtuMI | TCGCGA | 1 cut(s) | 144 |
| Cac8I | GCNNGC | 3 cut(s) | 184, 237, 318 |
| CfoI | GCGC | 2 cut(s) | 250, 322 |
| Cfr10I | RCCGGY | 3 cut(s) | 209, 259, 397 |
| Csp6I | GTAC | 1 cut(s) | 484 |
| CviAII | CATG | 3 cut(s) | 31, 135, 334 |
| CviQI | GTAC | 1 cut(s) | 484 |
| DdeI | CTNAG | 1 cut(s) | 240 |
| DinI | GGCGCC | 1 cut(s) | 249 |
| DpnI | GATC | 1 cut(s) | 375 |
| DpnII | GATC | 1 cut(s) | 373 |
| EaeI | YGGCCR | 3 cut(s) | 70, 207, 369 |
| EagI | CGGCCG | 1 cut(s) | 369 |
| EclXI | CGGCCG | 1 cut(s) | 369 |
| Eco130I | CCWWGG | 1 cut(s) | 30 |
| Eco32I | GATATC | 1 cut(s) | 473 |
| Eco47III | AGCGCT | 1 cut(s) | 321 |
| Eco52I | CGGCCG | 1 cut(s) | 369 |
| EcoRI | GAATTC | 2 cut(s) | 302, 358 |
| EcoRV | GATATC | 1 cut(s) | 473 |
| EcoT14I | CCWWGG | 1 cut(s) | 30 |
| EgeI | GGCGCC | 1 cut(s) | 249 |
| EheI | GGCGCC | 1 cut(s) | 249 |
| ErhI | CCWWGG | 1 cut(s) | 30 |
| FaeI | CATG | 3 cut(s) | 34, 138, 337 |
| FaiI | YATR | 6 cut(s) | 32, 136, 189, 335, 345, 356 |
| FaqI | GGGAC | 2 cut(s) | 70, 362 |
| FatI | CATG | 3 cut(s) | 30, 134, 333 |
| Fnu4HI | GCNGC | 3 cut(s) | 56, 387, 390 |
| Fsp4HI | GCNGC | 3 cut(s) | 56, 387, 390 |
| GlaI | GCGC | 2 cut(s) | 249, 321 |
| GluI | GCNGC | 3 cut(s) | 56, 387, 390 |
| HaeII | RGCGCY | 2 cut(s) | 251, 323 |
| HaeIII | GGCC | 4 cut(s) | 72, 174, 209, 371 |
| HapII | CCGG | 4 cut(s) | 210, 260, 398, 468 |
| HhaI | GCGC | 2 cut(s) | 250, 322 |
| Hin1I | GRCGYC | 1 cut(s) | 248 |
| Hin1II | CATG | 3 cut(s) | 34, 138, 337 |
| Hin6I | GCGC | 2 cut(s) | 248, 320 |
| HinP1I | GCGC | 2 cut(s) | 248, 320 |
| HinfI | GANTC | 2 cut(s) | 80, 442 |
| HpaII | CCGG | 4 cut(s) | 210, 260, 398, 468 |
| HphI | GGTGA | 1 cut(s) | 249 |
| Hpy188I | TCNGA | 2 cut(s) | 112, 170 |
| Hpy188III | TCNNGA | 2 cut(s) | 143, 446 |
| HpyCH4III | ACNGT | 1 cut(s) | 116 |
| HpyCH4IV | ACGT | 1 cut(s) | 351 |
| HpyCH4V | TGCA | 2 cut(s) | 129, 502 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 215, 245 |
| HpyF3I | CTNAG | 1 cut(s) | 240 |
| HpySE526I | ACGT | 1 cut(s) | 351 |
| Hsp92I | GRCGYC | 1 cut(s) | 248 |
| Hsp92II | CATG | 3 cut(s) | 34, 138, 337 |
| HspAI | GCGC | 2 cut(s) | 248, 320 |
| KasI | GGCGCC | 1 cut(s) | 247 |
| Kzo9I | GATC | 1 cut(s) | 373 |
| LmnI | GCTCC | 1 cut(s) | 215 |
| LpnPI | CCDG | 6 cut(s) | 223, 273, 300, 411, 431, 481 |
| Lsp1109I | GCAGC | 3 cut(s) | 42, 398, 401 |
| LweI | GCATC | 1 cut(s) | 42 |
| MaeII | ACGT | 1 cut(s) | 351 |
| MalI | GATC | 1 cut(s) | 375 |
| MboI | GATC | 1 cut(s) | 373 |
| MboII | GAAGA | 2 cut(s) | 29, 418 |
| MhlI | GDGCHC | 1 cut(s) | 287 |
| MlsI | TGGCCA | 1 cut(s) | 72 |
| MluCI | AATT | 3 cut(s) | 302, 358, 454 |
| MluNI | TGGCCA | 1 cut(s) | 72 |
| Mly113I | GGCGCC | 1 cut(s) | 248 |
| MnlI | CCTC | 5 cut(s) | 118, 164, 176, 320, 330 |
| Mox20I | TGGCCA | 1 cut(s) | 72 |
| MscI | TGGCCA | 1 cut(s) | 72 |
| MseI | TTAA | 2 cut(s) | 491, 514 |
| Msp20I | TGGCCA | 1 cut(s) | 72 |
| MspI | CCGG | 4 cut(s) | 210, 260, 398, 468 |
| MspR9I | CCNGG | 1 cut(s) | 468 |
| MvnI | CGCG | 1 cut(s) | 144 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 215, 245 |
| NarI | GGCGCC | 1 cut(s) | 248 |
| NciI | CCSGG | 1 cut(s) | 468 |
| NcoI | CCATGG | 1 cut(s) | 30 |
| NdeII | GATC | 1 cut(s) | 373 |
| NlaIII | CATG | 3 cut(s) | 34, 138, 337 |
| NlaIV | GGNNCC | 3 cut(s) | 217, 249, 462 |
| NruI | TCGCGA | 1 cut(s) | 144 |
| NspI | RCATGY | 1 cut(s) | 138 |
| PciI | ACATGT | 1 cut(s) | 134 |
| PfeI | GAWTC | 2 cut(s) | 80, 442 |
| PkrI | GCNGC | 3 cut(s) | 57, 388, 391 |
| Ple19I | CGATCG | 1 cut(s) | 376 |
| PluTI | GGCGCC | 1 cut(s) | 251 |
| PscI | ACATGT | 1 cut(s) | 134 |
| PspN4I | GGNNCC | 3 cut(s) | 217, 249, 462 |
| PvuI | CGATCG | 1 cut(s) | 376 |
| RruI | TCGCGA | 1 cut(s) | 144 |
| RsaI | GTAC | 1 cut(s) | 485 |
| RsaNI | GTAC | 1 cut(s) | 484 |
| SaqAI | TTAA | 2 cut(s) | 491, 514 |
| SatI | GCNGC | 3 cut(s) | 56, 387, 390 |
| Sau3AI | GATC | 1 cut(s) | 373 |
| ScrFI | CCNGG | 1 cut(s) | 468 |
| SduI | GDGCHC | 1 cut(s) | 287 |
| SetI | ASST | 4 cut(s) | 110, 228, 237, 354 |
| SfaNI | GCATC | 1 cut(s) | 42 |
| SfoI | GGCGCC | 1 cut(s) | 249 |
| Sse9I | AATT | 3 cut(s) | 302, 358, 454 |
| SspDI | GGCGCC | 1 cut(s) | 247 |
| StyD4I | CCNGG | 1 cut(s) | 466 |
| StyI | CCWWGG | 1 cut(s) | 30 |
| TaaI | ACNGT | 1 cut(s) | 116 |
| TaiI | ACGT | 1 cut(s) | 354 |
| TaqI | TCGA | 1 cut(s) | 376 |
| TasI | AATT | 3 cut(s) | 302, 358, 454 |
| TfiI | GAWTC | 2 cut(s) | 80, 442 |
| Tru1I | TTAA | 2 cut(s) | 491, 514 |
| Tru9I | TTAA | 2 cut(s) | 491, 514 |
| TseI | GCWGC | 3 cut(s) | 55, 386, 389 |
| TspDTI | ATGAA | 2 cut(s) | 17, 371 |
| XapI | RAATTY | 3 cut(s) | 302, 358, 454 |
| XceI | RCATGY | 1 cut(s) | 138 |