AT2G11810

Monogalactosyldiacylglycerol (MGDG) synthase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
4743162 .. 4746813
3652 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G11810.4

Sequence Viewer

Length: 1398 bp
ATGATGAAAGTGGTGTCACCTCGTACACGGTCGGATTCAATCACTGAGAAGGTGTTTCGACGAGTCTATAGCAATTTTAACATCTCAACAGTAGAAGATGAGTATATCCATCGTCAGAGATCAAGTGATTATGAGAAGGAGAGTCGTCTAAGGAAGAGAGGGTTAGAAGACAAAGAAGAAGTTATGGAGATGGAGCAGATGGGAGCAGAGAGGATCAAAACTGTTCTTATTCTCATGAGTGATACCGGCGGTGGCCACCGTGCTTCAGCCGAGGCCATCCGCGACGCTTTCAAGATCGAATTCGGAGATGACTATCGGATAATCATAAAAGATGTTTGGAAAGAATACACTGGATGGCCATTGAACGACATGGAGAGACAGTACAAGTTCATGGTGAAACATGTTGGTCTTTGGTCTGTTGCGTTTCATGGTACTTCTCCCAAATGGATCCACAAAAGCTATCTAAGTGCTCTTGCCGCTTATTATGCCAAAGAAATAGAGGCCGGTTTAATGGAGTACAAACCGGACATTATTATTAGCGTGCATCCTCTGATGCAACACATACCATTGTGGGTAATGAAATGGCAAGGACTTCACAAGAAAGTTATTTTCGTTACGGTCATCACTGATCTAAACACTTGCCACCGTACATGGTTCCATCATGGAGTCAGCAGATGTTATTGTCCGTCCAAAGAGGTTGCAAAGAGAGCATTAGTAGACGGCCTTGATGACTCTCAAATCCGTGTCTTTGGCTTACCTGTCCGCCCATCTTTCCCTCGCACTATTCTCAACAAGAATGAACTAAGGAAGGAACTTGAAATAGACTTAAATTTACCTGCGGTTCTATTAATGGGAGGGGGTGAAGGAATGGGTCCGGTTCAAAAAACAGCTCTAGCCCTTGGAGATTCTTTATACAACTCTAAAGAAAGTAATCCAATAGGACAATTGATTGTCATATGCGGCCGGAACAAAGTCCTTGCTTCTACATTAGCATCTCATGAATGGAAGATTCCGGTCAAGGTTCGAGGGTTTGAAACACAAATGGAAAAATGGATGGGAGCTTGTGATTGTATCATCACTAAGGCTGGTCCGGGTACGATTGCGGAAGCACTGATTTGCGGCCTCCCAATTATCCTCAATGACTATATTCCTGGACAGGAAAAAGGCAACGTGCCGTATGTTGTGGACAATGGGGCTGGAGTTTTCACCCGAAGTCCCAAAGAAACTGCGAAAATCGTGGCGGATTGGTTTAGCAACAATAAAGAGGAATTAAAGAAAATGTCAGAGAATGCTCTAAAGTTGTCGCAACCTGAAGCCGTGTTCGACATTGTGAAGGATATCCATCATCTATCCCAACAACAACAACGTATTCCACTTTTTAATGAATTTTCCTATTGA

Protein Analysis

465

Amino Acids

52.99

Weight (kDa)

8.47

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MGDG_synth PF06925 1 - 131 1.2e-47 Monogalactosyldiacylglycerol (MGDG) synthase
Glyco_tran_28_C PF04101 161 - 308 4.8e-10 Glycosyltransferase family 28 C-terminal domain
Glycos_transf_1 PF00534 193 - 309 1.3e-07 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 844
AccI GTMKAC 1 cut(s) 717
AccII CGCG 1 cut(s) 282
AciI CCGC 9 cut(s) 249, 280, 477, 763, 839, 960, 1103, 1119, 1241
AclWI GGATC 3 cut(s) 221, 442, 455
AcoI YGGCCR 3 cut(s) 253, 356, 961
AcsI RAATTY 3 cut(s) 299, 829, 1385
AcuI CTGAAG 2 cut(s) 249, 1332
AfaI GTAC 6 cut(s) 25, 383, 433, 518, 649, 1096
AflIII ACRYGT 1 cut(s) 400
AgsI TTSAA 6 cut(s) 39, 292, 364, 818, 881, 1034
AjnI CCWGG 1 cut(s) 1150
AluBI AGCT 3 cut(s) 459, 890, 1061
AluI AGCT 3 cut(s) 459, 890, 1061
Alw21I GWGCWC 1 cut(s) 472
Alw26I GTCTC 1 cut(s) 370
AlwI GGATC 3 cut(s) 221, 442, 455
AoxI GGCC 7 cut(s) 253, 273, 356, 501, 721, 961, 1120
ApoI RAATTY 3 cut(s) 299, 829, 1385
AseI ATTAAT 1 cut(s) 848
AspS9I GGNCC 2 cut(s) 872, 1088
AsuC2I CCSGG 1 cut(s) 1092
AsuHPI GGTGA 4 cut(s) 9, 406, 872, 1198
AvaII GGWCC 2 cut(s) 872, 1088
BalI TGGCCA 2 cut(s) 255, 358
BamHI GGATCC 1 cut(s) 447
BbsI GAAGAC 1 cut(s) 174
Bbv12I GWGCWC 1 cut(s) 472
BccI CCATC 9 cut(s) 117, 184, 193, 284, 348, 666, 775, 1048, 1350
BceAI ACGGC 3 cut(s) 736, 1159, 1301
BciT130I CCWGG 1 cut(s) 1152
BcnI CCSGG 1 cut(s) 1092
BcoDI GTCTC 1 cut(s) 370
BfaI CTAG 1 cut(s) 893
BfmI CTRYAG 1 cut(s) 67
BfuAI ACCTGC 1 cut(s) 844
BisI GCNGC 3 cut(s) 477, 961, 1120
BlsI GCNGC 3 cut(s) 478, 962, 1121
Bme1390I CCNGG 2 cut(s) 1092, 1152
Bme18I GGWCC 2 cut(s) 872, 1088
BmgT120I GGNCC 2 cut(s) 872, 1088
BmiI GGNNCC 3 cut(s) 449, 656, 873
BmrFI CCNGG 2 cut(s) 1092, 1152
BmsI GCATC 3 cut(s) 543, 553, 1001
BpiI GAAGAC 1 cut(s) 174
BpmI CTGGAG 1 cut(s) 1218
BpuMI CCSGG 1 cut(s) 1092
BsaBI GATNNNNATC 2 cut(s) 312, 1341
BsaJI CCNNGG 2 cut(s) 270, 898
BsaWI WCCGGW 3 cut(s) 523, 874, 1012
BsaXI ACNNNNNCTCC 2 cut(s) 365, 395
Bse118I RCCGGY 2 cut(s) 245, 503
Bse1I ACTGG 1 cut(s) 355
Bse8I GATNNNNATC 2 cut(s) 312, 1341
BseBI CCWGG 1 cut(s) 1152
BseDI CCNNGG 2 cut(s) 270, 898
BseGI GGATG 4 cut(s) 276, 359, 544, 1059
BseJI GATNNNNATC 2 cut(s) 312, 1341
BseMII CTCAG 1 cut(s) 36
BseNI ACTGG 1 cut(s) 355
BseX3I CGGCCG 1 cut(s) 961
Bsh1236I CGCG 1 cut(s) 282
Bsh1285I CGRYCG 2 cut(s) 32, 964
BshFI GGCC 7 cut(s) 255, 275, 358, 503, 723, 963, 1122
BsiEI CGRYCG 2 cut(s) 32, 964
BsiHKAI GWGCWC 1 cut(s) 472
BsiSI CCGG 7 cut(s) 246, 504, 524, 875, 964, 1013, 1091
BslFI GGGAC 1 cut(s) 1200
BsmAI GTCTC 1 cut(s) 370
BsmFI GGGAC 1 cut(s) 1200
BsmI GAATGC 1 cut(s) 1294
BsnI GGCC 7 cut(s) 255, 275, 358, 503, 723, 963, 1122
Bsp1286I GDGCHC 1 cut(s) 472
Bsp143I GATC 5 cut(s) 119, 213, 294, 447, 628
BspACI CCGC 9 cut(s) 249, 280, 477, 763, 839, 960, 1103, 1119, 1241
BspANI GGCC 7 cut(s) 255, 275, 358, 503, 723, 963, 1122
BspCNI CTCAG 1 cut(s) 37
BspFNI CGCG 1 cut(s) 282
BspHI TCATGA 2 cut(s) 234, 997
BspLI GGNNCC 3 cut(s) 449, 656, 873
BspMI ACCTGC 1 cut(s) 844
BspPI GGATC 3 cut(s) 221, 442, 455
BsrFI RCCGGY 2 cut(s) 245, 503
BsrI ACTGG 1 cut(s) 355
BssAI RCCGGY 2 cut(s) 245, 503
BssECI CCNNGG 2 cut(s) 270, 898
BssMI GATC 5 cut(s) 119, 213, 294, 447, 628
BssT1I CCWWGG 1 cut(s) 898
Bst2UI CCWGG 1 cut(s) 1152
Bst4CI ACNGT 7 cut(s) 30, 91, 223, 260, 381, 619, 647
Bst6I CTCTTC 1 cut(s) 149
BstC8I GCNNGC 1 cut(s) 542
BstDEI CTNAG 5 cut(s) 45, 149, 464, 803, 1080
BstF5I GGATG 4 cut(s) 276, 359, 544, 1059
BstFNI CGCG 1 cut(s) 282
BstKTI GATC 5 cut(s) 122, 216, 297, 450, 631
BstMAI GTCTC 1 cut(s) 370
BstMBI GATC 5 cut(s) 119, 213, 294, 447, 628
BstMCI CGRYCG 2 cut(s) 32, 964
BstMWI GCNNNNNNNGC 3 cut(s) 476, 485, 707
BstNI CCWGG 1 cut(s) 1152
BstNSI RCATGY 1 cut(s) 404
BstSCI CCNGG 2 cut(s) 1090, 1150
BstSFI CTRYAG 1 cut(s) 67
BstUI CGCG 1 cut(s) 282
BstV2I GAAGAC 1 cut(s) 174
BstX2I RGATCY 1 cut(s) 447
BstYI RGATCY 1 cut(s) 447
BstZI CGGCCG 1 cut(s) 961
BsuRI GGCC 7 cut(s) 255, 275, 358, 503, 723, 963, 1122
BtsCI GGATG 4 cut(s) 276, 359, 544, 1059
BtsIMutI CAGTG 4 cut(s) 42, 348, 624, 1109
BveI ACCTGC 1 cut(s) 844
Cac8I GCNNGC 1 cut(s) 542
CciI TCATGA 2 cut(s) 234, 997
Cfr10I RCCGGY 2 cut(s) 245, 503
Cfr13I GGNCC 2 cut(s) 872, 1088
CseI GACGC 1 cut(s) 293
Csp6I GTAC 6 cut(s) 24, 382, 432, 517, 648, 1095
CviAII CATG 8 cut(s) 235, 370, 391, 401, 428, 651, 662, 998
CviQI GTAC 6 cut(s) 24, 382, 432, 517, 648, 1095
DdeI CTNAG 5 cut(s) 45, 149, 464, 803, 1080
DpnI GATC 5 cut(s) 121, 215, 296, 449, 630
DpnII GATC 5 cut(s) 119, 213, 294, 447, 628
EaeI YGGCCR 3 cut(s) 253, 356, 961
EagI CGGCCG 1 cut(s) 961
Eam1104I CTCTTC 1 cut(s) 149
EarI CTCTTC 1 cut(s) 149
EciI GGCGGA 2 cut(s) 752, 1256
EclXI CGGCCG 1 cut(s) 961
Eco130I CCWWGG 1 cut(s) 898
Eco32I GATATC 1 cut(s) 1339
Eco47I GGWCC 2 cut(s) 872, 1088
Eco52I CGGCCG 1 cut(s) 961
Eco57I CTGAAG 2 cut(s) 249, 1332
EcoRI GAATTC 1 cut(s) 299
EcoRII CCWGG 1 cut(s) 1150
EcoRV GATATC 1 cut(s) 1339
EcoT14I CCWWGG 1 cut(s) 898
ErhI CCWWGG 1 cut(s) 898
FaeI CATG 8 cut(s) 238, 373, 394, 404, 431, 654, 665, 1001
FaqI GGGAC 1 cut(s) 1200
FatI CATG 8 cut(s) 234, 369, 390, 400, 427, 650, 661, 997
FauNDI CATATG 1 cut(s) 956
FblI GTMKAC 1 cut(s) 717
Fnu4HI GCNGC 3 cut(s) 477, 961, 1120
FokI GGATG 4 cut(s) 263, 366, 531, 1066
Fsp4HI GCNGC 3 cut(s) 477, 961, 1120
FspBI CTAG 1 cut(s) 893
GluI GCNGC 3 cut(s) 477, 961, 1120
GsuI CTGGAG 1 cut(s) 1218
HaeIII GGCC 7 cut(s) 255, 275, 358, 503, 723, 963, 1122
HapII CCGG 7 cut(s) 246, 504, 524, 875, 964, 1013, 1091
HgaI GACGC 1 cut(s) 293
Hin1II CATG 8 cut(s) 238, 373, 394, 404, 431, 654, 665, 1001
HinfI GANTC 7 cut(s) 35, 63, 142, 666, 731, 905, 1009
HpaII CCGG 7 cut(s) 246, 504, 524, 875, 964, 1013, 1091
HphI GGTGA 4 cut(s) 9, 406, 872, 1198
Hpy166II GTNNAC 3 cut(s) 26, 718, 1186
Hpy188I TCNGA 6 cut(s) 34, 117, 305, 318, 552, 1285
Hpy188III TCNNGA 3 cut(s) 235, 292, 998
Hpy8I GTNNAC 3 cut(s) 26, 718, 1186
Hpy99I CGWCG 2 cut(s) 63, 287
HpyAV CCTTC 5 cut(s) 43, 130, 802, 857, 1327
HpyCH4III ACNGT 7 cut(s) 30, 91, 223, 260, 381, 619, 647
HpyCH4IV ACGT 2 cut(s) 1170, 1366
HpyCH4V TGCA 3 cut(s) 544, 556, 701
HpyF10VI GCNNNNNNNGC 3 cut(s) 476, 485, 707
HpyF3I CTNAG 5 cut(s) 45, 149, 464, 803, 1080
HpySE526I ACGT 2 cut(s) 1170, 1366
Hsp92II CATG 8 cut(s) 238, 373, 394, 404, 431, 654, 665, 1001
Kzo9I GATC 5 cut(s) 119, 213, 294, 447, 628
LmnI GCTCC 3 cut(s) 193, 203, 1058
LweI GCATC 3 cut(s) 543, 553, 1001
MaeI CTAG 1 cut(s) 893
MaeII ACGT 2 cut(s) 1170, 1366
MaeIII GTNAC 2 cut(s) 15, 613
MalI GATC 5 cut(s) 121, 215, 296, 449, 630
MboI GATC 5 cut(s) 119, 213, 294, 447, 628
MboII GAAGA 5 cut(s) 107, 166, 179, 188, 1018
MfeI CAATTG 1 cut(s) 944
MflI RGATCY 1 cut(s) 447
MhlI GDGCHC 1 cut(s) 472
MlsI TGGCCA 2 cut(s) 255, 358
MluCI AATT 7 cut(s) 73, 299, 829, 944, 1128, 1268, 1385
MluNI TGGCCA 2 cut(s) 255, 358
MlyI GAGTC 4 cut(s) 72, 151, 675, 725
MmeI TCCRAC 1 cut(s) 12
Mox20I TGGCCA 2 cut(s) 255, 358
MscI TGGCCA 2 cut(s) 255, 358
MseI TTAA 6 cut(s) 78, 509, 827, 848, 1271, 1380
Msp20I TGGCCA 2 cut(s) 255, 358
MspI CCGG 7 cut(s) 246, 504, 524, 875, 964, 1013, 1091
MspR9I CCNGG 2 cut(s) 1092, 1152
MunI CAATTG 1 cut(s) 944
Mva1269I GAATGC 1 cut(s) 1294
MvaI CCWGG 1 cut(s) 1152
MvnI CGCG 1 cut(s) 282
MwoI GCNNNNNNNGC 3 cut(s) 476, 485, 707
NciI CCSGG 1 cut(s) 1092
NdeI CATATG 1 cut(s) 956
NdeII GATC 5 cut(s) 119, 213, 294, 447, 628
NlaIII CATG 8 cut(s) 238, 373, 394, 404, 431, 654, 665, 1001
NlaIV GGNNCC 3 cut(s) 449, 656, 873
NmeAIII GCCGAG 1 cut(s) 295
NmuCI GTSAC 1 cut(s) 15
NspI RCATGY 1 cut(s) 404
PagI TCATGA 2 cut(s) 234, 997
PciI ACATGT 1 cut(s) 400
PctI GAATGC 1 cut(s) 1294
PfeI GAWTC 3 cut(s) 35, 905, 1009
PfoI TCCNGGA 1 cut(s) 1150
PkrI GCNGC 3 cut(s) 478, 962, 1121
PleI GAGTC 4 cut(s) 71, 150, 674, 725
PpsI GAGTC 4 cut(s) 71, 150, 674, 725
PscI ACATGT 1 cut(s) 400
PshBI ATTAAT 1 cut(s) 848
Psp6I CCWGG 1 cut(s) 1150
PspGI CCWGG 1 cut(s) 1150
PspN4I GGNNCC 3 cut(s) 449, 656, 873
PspPI GGNCC 2 cut(s) 872, 1088
PsuI RGATCY 1 cut(s) 447
RsaI GTAC 6 cut(s) 25, 383, 433, 518, 649, 1096
RsaNI GTAC 6 cut(s) 24, 382, 432, 517, 648, 1095
SaqAI TTAA 6 cut(s) 78, 509, 827, 848, 1271, 1380
SatI GCNGC 3 cut(s) 477, 961, 1120
Sau3AI GATC 5 cut(s) 119, 213, 294, 447, 628
Sau96I GGNCC 2 cut(s) 872, 1088
SchI GAGTC 4 cut(s) 72, 151, 675, 725
ScrFI CCNGG 2 cut(s) 1092, 1152
SduI GDGCHC 1 cut(s) 472
SfaNI GCATC 3 cut(s) 543, 553, 1001
SfcI CTRYAG 1 cut(s) 67
SinI GGWCC 2 cut(s) 872, 1088
Sse9I AATT 7 cut(s) 73, 299, 829, 944, 1128, 1268, 1385
SsiI CCGC 9 cut(s) 249, 280, 477, 763, 839, 960, 1103, 1119, 1241
SspMI CTAG 1 cut(s) 893
StyD4I CCNGG 2 cut(s) 1090, 1150
StyI CCWWGG 1 cut(s) 898
TaaI ACNGT 7 cut(s) 30, 91, 223, 260, 381, 619, 647
TaiI ACGT 2 cut(s) 1173, 1369
TaqI TCGA 4 cut(s) 58, 297, 1024, 1323
TasI AATT 7 cut(s) 73, 299, 829, 944, 1128, 1268, 1385
TatI WGTACW 2 cut(s) 381, 516
TauI GCSGC 3 cut(s) 479, 963, 1122
TfiI GAWTC 3 cut(s) 35, 905, 1009
Tru1I TTAA 6 cut(s) 78, 509, 827, 848, 1271, 1380
Tru9I TTAA 6 cut(s) 78, 509, 827, 848, 1271, 1380
TscAI CASTG 4 cut(s) 49, 355, 631, 1116
TseFI GTSAC 1 cut(s) 15
Tsp45I GTSAC 1 cut(s) 15
TspDTI ATGAA 7 cut(s) 20, 379, 416, 593, 813, 1014, 1398
TspGWI ACGGA 2 cut(s) 675, 731
TspRI CASTG 4 cut(s) 49, 355, 631, 1116
VpaK11BI GGWCC 2 cut(s) 872, 1088
VspI ATTAAT 1 cut(s) 848
XapI RAATTY 3 cut(s) 299, 829, 1385
XceI RCATGY 1 cut(s) 404
XmiI GTMKAC 1 cut(s) 717
XspI CTAG 1 cut(s) 893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.