Prupe.7G251400_v2.0.a1

Monogalactosyldiacylglycerol synthase 2

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
21254983 .. 21258208
3226 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G251400.1

Sequence Viewer

Length: 1392 bp
ATGATGTCGGTGGCGTCTCCGCGAAAGTCAATAACAGAGAAGGTGTTTGAGAAGGTTGGGGGATATTCATACCTGAGCTACCTCAAGAACAACAGCAGCAGTCACAGTCTGAGGTGTGACGATGAAAGTGACGACGATTACTACGAGGATGGGACTATGGAGCTGGTGCAGATTGGAGCTGAGAGGACCAAGAACGTCTTGATTCTCATGAGTGACACAGGTGGTGGCCACCGAGCTTCTGCCGAGGCCATACGCGATACCTTTCGTATGGAGTTTGGCGATGAATACAGGATATTCGTGAAGGATGTTTGGAAAGAGTACACCGGTTGGCCGCTAAATGACATGGAGAGGTCATACAAATTCATGGTGAAACATGTGCAACTGTGGAAGGTCGCATTTCACAGCACCTCTCCTCGATGGATACACAGTGTCTATCTTGCTGCTATTGCAGCCTACTATGCCAAGGAGGTGGAGGCTGGTCTCATGGAGTACAAGCCAGATATTATAATCAGTGTACATCCTTTGATGCAACATATTCCTCTGTGGGTTCTCAAATGGCAAGGCCTTCAGAAGAAAGTGATTTTTGTGACAGTTATCACAGATCTCAACACCTGCCATCCCACATGGTTTCATCCTGGGGTGAATAGGTGCTATTGCCCATCACAGGAGGTAGCTAAAAGGGCTTTATTAGATGGTCTTGAAGATTCTCAAATACGTGTTTTTGGCTTGCCAATCCGGCCCACTTTTGCCCGTGCAGTTCTCTCCAAGGATCAACTCAGAGAAGAACTTGAAATGGACCCCGACTTGCCTGCGGTTTTGCTGATGGGAGGTGGTGAAGGAATGGGACCTGTAAAGGAAACTGGAAGGGCTCTGGGAGAAACACTCTTTGATAAAGAACTTGGAAAACCAATTGGGCAGTTGATCATCATATGTGGGCGTAATAAAAACCTCACCTCTACACTCCAGACCGATGAATGGAAGATTCCAGTAAAGGTTAGAGGGTTTGAGACCCAAATGGAAAAATGGATGGGAGCTTGTGATTGCATCATAACAAAGGCTGGACCTGGCACAATAGCAGAGGCATTGATCAGGGGGCTTCCTATCATCCTCAATGACTACATTCCAGGACAAGAAAAGGGCAATGTGCCTTATGTGGTAGACAATGGGGCTGGTGTGTTCACCAGAAGTTCCAAGGAAACAGCCAGGATTGTGGCTGAATGGTTCAGCACCAAAACAGATGAACTCAAAATGATGTCTGAGAATGCACTTAAACTGGCACAACCCGAGGCTGTTTTCGACATTGTTAAGGACATCCATGATCTTGCCTGCCAACGCGGTCCTCTTGCAAACATCCCTTACATGCTGACATCGTCGTTTACAAGTTTAATCTAA

Protein Analysis

464

Amino Acids

52.13

Weight (kDa)

5.89

Isoelectric Point (pI)

34.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 506
AarI CACCTGC 1 cut(s) 620
Acc36I ACCTGC 1 cut(s) 620
AccI GTMKAC 1 cut(s) 1158
AccII CGCG 3 cut(s) 22, 255, 1335
AciI CCGC 4 cut(s) 20, 332, 812, 1335
AclWI GGATC 1 cut(s) 777
AcoI YGGCCR 2 cut(s) 226, 329
AcsI RAATTY 1 cut(s) 359
AcuI CTGAAG 1 cut(s) 551
AcyI GRCGYC 1 cut(s) 14
AfaI GTAC 3 cut(s) 320, 491, 516
AfiI CCNNNNNNNGG 2 cut(s) 664, 975
AflIII ACRYGT 2 cut(s) 373, 715
AgeI ACCGGT 1 cut(s) 323
AgsI TTSAA 2 cut(s) 701, 791
AjnI CCWGG 4 cut(s) 634, 1063, 1123, 1202
AluBI AGCT 6 cut(s) 78, 163, 179, 236, 674, 1034
AluI AGCT 6 cut(s) 78, 163, 179, 236, 674, 1034
Alw26I GTCTC 3 cut(s) 21, 485, 1001
AlwI GGATC 1 cut(s) 777
Ama87I CYCGRG 1 cut(s) 1283
AoxI GGCC 5 cut(s) 226, 246, 329, 562, 737
ApeKI GCWGC 3 cut(s) 96, 440, 449
ApoI RAATTY 1 cut(s) 359
AsiGI ACCGGT 1 cut(s) 323
AspS9I GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
AsuHPI GGTGA 5 cut(s) 379, 652, 845, 943, 1171
AvaI CYCGRG 1 cut(s) 1283
AvaII GGWCC 5 cut(s) 186, 796, 845, 1061, 1337
BalI TGGCCA 1 cut(s) 228
BanII GRGCYC 1 cut(s) 871
BbvI GCAGC 3 cut(s) 108, 427, 461
BccI CCATC 7 cut(s) 143, 411, 624, 667, 686, 817, 1021
BcgI CGANNNNNNTGC 2 cut(s) 791, 825
BciT130I CCWGG 4 cut(s) 636, 1065, 1125, 1204
BciVI GTATCC 1 cut(s) 414
BclI TGATCA 2 cut(s) 921, 1086
BcoDI GTCTC 3 cut(s) 21, 485, 1001
BfuAI ACCTGC 1 cut(s) 620
BfuI GTATCC 1 cut(s) 414
BglI GCCNNNNNGGC 1 cut(s) 736
BglII AGATCT 1 cut(s) 601
BisI GCNGC 4 cut(s) 97, 332, 441, 450
BlsI GCNGC 4 cut(s) 98, 333, 442, 451
Bme1390I CCNGG 4 cut(s) 636, 1065, 1125, 1204
Bme18I GGWCC 5 cut(s) 186, 796, 845, 1061, 1337
BmeT110I CYCGRG 1 cut(s) 1283
BmgT120I GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
BmiI GGNNCC 2 cut(s) 798, 846
BmrFI CCNGG 4 cut(s) 636, 1065, 1125, 1204
BmsI GCATC 2 cut(s) 516, 1053
BplI GAGNNNNNCTC 2 cut(s) 867, 899
BpmI CTGGAG 1 cut(s) 947
Bpu10I CCTNAGC 1 cut(s) 74
BpuEI CTTGAG 1 cut(s) 68
BsaAI YACGTR 1 cut(s) 716
BsaHI GRCGYC 1 cut(s) 14
BsaI GGTCTC 2 cut(s) 485, 1001
BsaJI CCNNGG 6 cut(s) 243, 462, 635, 765, 1191, 1284
BsaWI WCCGGW 1 cut(s) 323
Bsc4I CCNNNNNNNGG 2 cut(s) 664, 975
Bse118I RCCGGY 1 cut(s) 323
Bse1I ACTGG 3 cut(s) 865, 986, 1278
Bse3DI GCAATG 1 cut(s) 1147
BseBI CCWGG 4 cut(s) 636, 1065, 1125, 1204
BseDI CCNNGG 6 cut(s) 243, 462, 635, 765, 1191, 1284
BseGI GGATG 9 cut(s) 154, 310, 517, 616, 631, 1032, 1104, 1311, 1350
BseLI CCNNNNNNNGG 2 cut(s) 664, 975
BseMI GCAATG 1 cut(s) 1147
BseMII CTCAG 5 cut(s) 65, 101, 171, 790, 1248
BseNI ACTGG 3 cut(s) 865, 986, 1278
BseRI GAGGAG 1 cut(s) 402
BseXI GCAGC 3 cut(s) 108, 427, 461
BsgI GTGCAG 2 cut(s) 188, 774
Bsh1236I CGCG 3 cut(s) 22, 255, 1335
BshFI GGCC 5 cut(s) 228, 248, 331, 564, 739
BshTI ACCGGT 1 cut(s) 323
BsiHKCI CYCGRG 1 cut(s) 1283
BsiSI CCGG 2 cut(s) 324, 736
BslFI GGGAC 2 cut(s) 166, 858
BslI CCNNNNNNNGG 2 cut(s) 664, 975
BsmAI GTCTC 3 cut(s) 21, 485, 1001
BsmBI CGTCTC 1 cut(s) 21
BsmFI GGGAC 2 cut(s) 166, 858
BsmI GAATGC 1 cut(s) 1267
BsnI GGCC 5 cut(s) 228, 248, 331, 564, 739
Bso31I GGTCTC 2 cut(s) 485, 1001
BsoBI CYCGRG 1 cut(s) 1283
Bsp1286I GDGCHC 1 cut(s) 871
Bsp1407I TGTACA 1 cut(s) 514
Bsp143I GATC 5 cut(s) 601, 769, 921, 1086, 1318
BspACI CCGC 4 cut(s) 20, 332, 812, 1335
BspANI GGCC 5 cut(s) 228, 248, 331, 564, 739
BspCNI CTCAG 5 cut(s) 66, 102, 172, 789, 1249
BspFNI CGCG 3 cut(s) 22, 255, 1335
BspHI TCATGA 1 cut(s) 207
BspLI GGNNCC 2 cut(s) 798, 846
BspMI ACCTGC 1 cut(s) 620
BspPI GGATC 1 cut(s) 777
BspTNI GGTCTC 2 cut(s) 485, 1001
BsrDI GCAATG 1 cut(s) 1147
BsrFI RCCGGY 1 cut(s) 323
BsrGI TGTACA 1 cut(s) 514
BsrI ACTGG 3 cut(s) 865, 986, 1278
BssAI RCCGGY 1 cut(s) 323
BssECI CCNNGG 6 cut(s) 243, 462, 635, 765, 1191, 1284
BssMI GATC 5 cut(s) 601, 769, 921, 1086, 1318
BssNI GRCGYC 1 cut(s) 14
BssT1I CCWWGG 3 cut(s) 462, 765, 1191
Bst2UI CCWGG 4 cut(s) 636, 1065, 1125, 1204
Bst4CI ACNGT 4 cut(s) 107, 384, 428, 592
BstACI GRCGYC 1 cut(s) 14
BstAUI TGTACA 1 cut(s) 514
BstBAI YACGTR 1 cut(s) 716
BstC8I GCNNGC 3 cut(s) 728, 810, 1327
BstDEI CTNAG 5 cut(s) 74, 110, 180, 776, 1257
BstF5I GGATG 9 cut(s) 154, 310, 517, 616, 631, 1032, 1104, 1311, 1350
BstFNI CGCG 3 cut(s) 22, 255, 1335
BstKTI GATC 5 cut(s) 604, 772, 924, 1089, 1321
BstMAI GTCTC 3 cut(s) 21, 485, 1001
BstMBI GATC 5 cut(s) 601, 769, 921, 1086, 1318
BstMWI GCNNNNNNNGC 5 cut(s) 446, 449, 458, 680, 736
BstNI CCWGG 4 cut(s) 636, 1065, 1125, 1204
BstNSI RCATGY 2 cut(s) 377, 1363
BstSCI CCNGG 4 cut(s) 634, 1063, 1123, 1202
BstUI CGCG 3 cut(s) 22, 255, 1335
BstV1I GCAGC 3 cut(s) 108, 427, 461
BstX2I RGATCY 1 cut(s) 601
BstXI CCANNNNNNTGG 2 cut(s) 469, 1210
BstYI RGATCY 1 cut(s) 601
BsuI GTATCC 1 cut(s) 414
BsuRI GGCC 5 cut(s) 228, 248, 331, 564, 739
BtgZI GCGATG 1 cut(s) 294
BtsCI GGATG 9 cut(s) 154, 310, 517, 616, 631, 1032, 1104, 1311, 1350
BtsIMutI CAGTG 2 cut(s) 433, 517
BveI ACCTGC 1 cut(s) 620
Cac8I GCNNGC 3 cut(s) 728, 810, 1327
CciI TCATGA 1 cut(s) 207
Cfr10I RCCGGY 1 cut(s) 323
Cfr13I GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
CseI GACGC 1 cut(s) 3
Csp6I GTAC 3 cut(s) 319, 490, 515
CspAI ACCGGT 1 cut(s) 323
CviAII CATG 8 cut(s) 208, 343, 364, 374, 484, 624, 1316, 1360
CviQI GTAC 3 cut(s) 319, 490, 515
DdeI CTNAG 5 cut(s) 74, 110, 180, 776, 1257
DpnI GATC 5 cut(s) 603, 771, 923, 1088, 1320
DpnII GATC 5 cut(s) 601, 769, 921, 1086, 1318
EaeI YGGCCR 2 cut(s) 226, 329
Eco130I CCWWGG 3 cut(s) 462, 765, 1191
Eco147I AGGCCT 1 cut(s) 564
Eco24I GRGCYC 1 cut(s) 871
Eco31I GGTCTC 2 cut(s) 485, 1001
Eco47I GGWCC 5 cut(s) 186, 796, 845, 1061, 1337
Eco57I CTGAAG 1 cut(s) 551
Eco88I CYCGRG 1 cut(s) 1283
EcoO109I RGGNCCY 1 cut(s) 845
EcoRII CCWGG 4 cut(s) 634, 1063, 1123, 1202
EcoT14I CCWWGG 3 cut(s) 462, 765, 1191
EcoT38I GRGCYC 1 cut(s) 871
ErhI CCWWGG 3 cut(s) 462, 765, 1191
Esp3I CGTCTC 1 cut(s) 21
FaeI CATG 8 cut(s) 211, 346, 367, 377, 487, 627, 1319, 1363
FalI AAGNNNNNCTT 2 cut(s) 182, 214
FaqI GGGAC 2 cut(s) 166, 858
FatI CATG 8 cut(s) 207, 342, 363, 373, 483, 623, 1315, 1359
FauNDI CATATG 1 cut(s) 929
FbaI TGATCA 2 cut(s) 921, 1086
FblI GTMKAC 1 cut(s) 1158
Fnu4HI GCNGC 4 cut(s) 97, 332, 441, 450
FokI GGATG 9 cut(s) 161, 317, 504, 603, 618, 1039, 1091, 1298, 1337
FriOI GRGCYC 1 cut(s) 871
Fsp4HI GCNGC 4 cut(s) 97, 332, 441, 450
GluI GCNGC 4 cut(s) 97, 332, 441, 450
GsuI CTGGAG 1 cut(s) 947
HaeIII GGCC 5 cut(s) 228, 248, 331, 564, 739
HapII CCGG 2 cut(s) 324, 736
HgaI GACGC 1 cut(s) 3
Hin1I GRCGYC 1 cut(s) 14
Hin1II CATG 8 cut(s) 211, 346, 367, 377, 487, 627, 1319, 1363
HinfI GANTC 3 cut(s) 202, 704, 982
HpaII CCGG 2 cut(s) 324, 736
HphI GGTGA 5 cut(s) 379, 652, 845, 943, 1171
Hpy166II GTNNAC 5 cut(s) 321, 515, 1159, 1179, 1377
Hpy188I TCNGA 4 cut(s) 111, 570, 779, 1258
Hpy188III TCNNGA 6 cut(s) 85, 199, 208, 298, 698, 964
Hpy8I GTNNAC 5 cut(s) 321, 515, 1159, 1179, 1377
Hpy99I CGWCG 2 cut(s) 137, 1375
HpyAV CCTTC 7 cut(s) 34, 46, 295, 382, 575, 830, 858
HpyCH4III ACNGT 4 cut(s) 107, 384, 428, 592
HpyCH4IV ACGT 2 cut(s) 195, 715
HpyCH4V TGCA 8 cut(s) 169, 379, 449, 529, 755, 1044, 1265, 1346
HpyF10VI GCNNNNNNNGC 5 cut(s) 446, 449, 458, 680, 736
HpyF3I CTNAG 5 cut(s) 74, 110, 180, 776, 1257
HpySE526I ACGT 2 cut(s) 195, 715
Hsp92I GRCGYC 1 cut(s) 14
Hsp92II CATG 8 cut(s) 211, 346, 367, 377, 487, 627, 1319, 1363
Ksp22I TGATCA 2 cut(s) 921, 1086
Kzo9I GATC 5 cut(s) 601, 769, 921, 1086, 1318
LmnI GCTCC 3 cut(s) 160, 176, 1031
Lsp1109I GCAGC 3 cut(s) 108, 427, 461
LweI GCATC 2 cut(s) 516, 1053
MaeII ACGT 2 cut(s) 195, 715
MaeIII GTNAC 5 cut(s) 101, 116, 128, 212, 586
MalI GATC 5 cut(s) 603, 771, 923, 1088, 1320
MboI GATC 5 cut(s) 601, 769, 921, 1086, 1318
MboII GAAGA 4 cut(s) 583, 713, 794, 991
MfeI CAATTG 1 cut(s) 909
MflI RGATCY 1 cut(s) 601
MhlI GDGCHC 1 cut(s) 871
MlsI TGGCCA 1 cut(s) 228
MluCI AATT 2 cut(s) 359, 909
MluNI TGGCCA 1 cut(s) 228
Mox20I TGGCCA 1 cut(s) 228
MscI TGGCCA 1 cut(s) 228
MseI TTAA 3 cut(s) 1269, 1305, 1385
Msp20I TGGCCA 1 cut(s) 228
MspI CCGG 2 cut(s) 324, 736
MspR9I CCNGG 4 cut(s) 636, 1065, 1125, 1204
MunI CAATTG 1 cut(s) 909
Mva1269I GAATGC 1 cut(s) 1267
MvaI CCWGG 4 cut(s) 636, 1065, 1125, 1204
MvnI CGCG 3 cut(s) 22, 255, 1335
MwoI GCNNNNNNNGC 5 cut(s) 446, 449, 458, 680, 736
NdeI CATATG 1 cut(s) 929
NdeII GATC 5 cut(s) 601, 769, 921, 1086, 1318
NlaIII CATG 8 cut(s) 211, 346, 367, 377, 487, 627, 1319, 1363
NlaIV GGNNCC 2 cut(s) 798, 846
NmeAIII GCCGAG 1 cut(s) 268
NmuCI GTSAC 5 cut(s) 101, 116, 128, 212, 586
NspI RCATGY 2 cut(s) 377, 1363
PagI TCATGA 1 cut(s) 207
PaqCI CACCTGC 1 cut(s) 620
PceI AGGCCT 1 cut(s) 564
PciI ACATGT 1 cut(s) 373
PcsI WCGNNNNNNNCGW 1 cut(s) 141
PctI GAATGC 1 cut(s) 1267
PfeI GAWTC 3 cut(s) 202, 704, 982
PflFI GACNNNGTC 1 cut(s) 1369
PfoI TCCNGGA 1 cut(s) 1123
PinAI ACCGGT 1 cut(s) 323
PkrI GCNGC 4 cut(s) 98, 333, 442, 451
Ppu21I YACGTR 1 cut(s) 716
PpuMI RGGWCCY 1 cut(s) 845
PscI ACATGT 1 cut(s) 373
PsiI TTATAA 1 cut(s) 506
Psp5II RGGWCCY 1 cut(s) 845
Psp6I CCWGG 4 cut(s) 634, 1063, 1123, 1202
PspGI CCWGG 4 cut(s) 634, 1063, 1123, 1202
PspN4I GGNNCC 2 cut(s) 798, 846
PspPI GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
PspPPI RGGWCCY 1 cut(s) 845
PsuI RGATCY 1 cut(s) 601
PsyI GACNNNGTC 1 cut(s) 1369
RsaI GTAC 3 cut(s) 320, 491, 516
RsaNI GTAC 3 cut(s) 319, 490, 515
SaqAI TTAA 3 cut(s) 1269, 1305, 1385
SatI GCNGC 4 cut(s) 97, 332, 441, 450
Sau3AI GATC 5 cut(s) 601, 769, 921, 1086, 1318
Sau96I GGNCC 6 cut(s) 186, 738, 796, 845, 1061, 1337
ScrFI CCNGG 4 cut(s) 636, 1065, 1125, 1204
SduI GDGCHC 1 cut(s) 871
SfaNI GCATC 2 cut(s) 516, 1053
SinI GGWCC 5 cut(s) 186, 796, 845, 1061, 1337
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
Sse9I AATT 2 cut(s) 359, 909
SseBI AGGCCT 1 cut(s) 564
SsiI CCGC 4 cut(s) 20, 332, 812, 1335
StuI AGGCCT 1 cut(s) 564
StyD4I CCNGG 4 cut(s) 634, 1063, 1123, 1202
StyI CCWWGG 3 cut(s) 462, 765, 1191
TaaI ACNGT 4 cut(s) 107, 384, 428, 592
TaiI ACGT 2 cut(s) 198, 718
TaqI TCGA 2 cut(s) 415, 1296
TaqII GACCGA 1 cut(s) 983
TasI AATT 2 cut(s) 359, 909
TatI WGTACW 3 cut(s) 318, 489, 514
TauI GCSGC 1 cut(s) 334
TfiI GAWTC 3 cut(s) 202, 704, 982
Tru1I TTAA 3 cut(s) 1269, 1305, 1385
Tru9I TTAA 3 cut(s) 1269, 1305, 1385
TscAI CASTG 2 cut(s) 433, 517
TseFI GTSAC 5 cut(s) 101, 116, 128, 212, 586
TseI GCWGC 3 cut(s) 96, 440, 449
Tsp45I GTSAC 5 cut(s) 101, 116, 128, 212, 586
TspDTI ATGAA 7 cut(s) 57, 138, 297, 352, 620, 987, 1254
TspRI CASTG 2 cut(s) 433, 517
Tth111I GACNNNGTC 1 cut(s) 1369
VpaK11BI GGWCC 5 cut(s) 186, 796, 845, 1061, 1337
XapI RAATTY 1 cut(s) 359
XceI RCATGY 2 cut(s) 377, 1363
XmiI GTMKAC 1 cut(s) 1158
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.