Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr02

Orthogroup ID

OG0001366

Physical Location & Seq

Genomic Coordinates Reverse (-)

1450271 .. 1453477

Gene Structure 3207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD02G1020400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGATGTCCGTGGCGTCGCCGAGAAAGTCAATAACAGAGAAGGTGTTTGAGAGGGTTGGCGGGTATTCCTACCTGAGCAGCTACCTCAAGAACAACGGCGGAAGCCACAGAAGCCAGAGCCACCACCGCCACAACCACCACAAGGCGTGCGATATCGACGAGAGTGATGACGATTATTACGAGGATGAGGGGACGATGGAGCTCGTGCAGATTGGAGCTGAGCGGACCAAGAACGTCTTGATTCTCATGAGCGATACCGGCGGCGGCCACCGCGCTTCCGCTGAGGCCATTCGTGATGCCTTCCGTATGGAGTTTGGTGACGAATACAGGATATTTGTGAAGGATGTGTGGAAAGAGTACACAGGTTGGCCGTTAAACGACATGGAGAGGTCGTACAAATTCATGGTGAAACATGTGCAGCTGTGGAAGGTTGCATTTCACAGCACCTCTCCTCGATGGATCCACAGAGTCTATCTCGCTGCTATAGCCGCCTACTATGCCAAGGAGGTGGAGGCTGGTCTAATGGAGTACAAGCCCGACATTATAATCAGTGTGCATCCTTTGATGCAACACATTCCTCTGTGGGTGCTCAAATGGCAAGGCCTGCAGAAGAAAGTTATTTTCGTGACGGTTATCACTGACCTCAACACCTGCCATCGTACATGGTTTCATCCCGGGGTCAATAGGTGCTACTGCCCATCACAGGAGGTAGCGAAAAGGGCTCTAGTAGACGGCCTTGACGAGTCTCAAACATGTGTCTTTGGCTTGCCCATCCGACCCTCTTTTGCCCGCGCGGTTCTCTCCAAGGATCAACTCAGAGAAGAACTCGAAATGGACCCTGACTTGCCTGCGGTTCTGCTCATGGGAGGCGGCGAAGGAATGGGACCTGTAAAGGAAACTGCAAGGGCTCTCGCAGAAACACTCTTTGATAAAGAAGCTGGAAAACCGATAGGGCAGCTGATCATCATATGCGGGAGGAACAAAACCCTCACTGCCACGCTTGAGTCCGATGAATGGAACATACCAGTGAAGGTTAGAGGATTTGAGACACAAATGGAAAAATGGATGGGAGCTTGTGATTGCATCATAACAAAGGCAGGACCTGGCACAATAGCAGAAGCATTGATCAGGGGACTTCCTATTATCCTCAACGACTACATTCCCGGACAAGAAAAGGGCAATGTGCCTTATGTGGTGGACAATGGGGCCGGCGTCTTCACCAGAAGTCCCAAGGAAACAGCAAGGATTGTAGCGGAATGGTTCAGCACCAAAACAGACGAACTCAAAATGATGTCGGAGAATGCACTTAGACTAGCGCAACCTGAGGCTGTGTTCGACATTGTCAAGGACATCCACGAGCTTGCCCTCCAACGTGGTCCTCTCACGAACATCCCTTACATGCTTACATCGTCGTTTTCGAGTTTAATTGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006629 GO:0006631 GO:0006643 GO:0006664 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008194 GO:0008378 GO:0009267 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009605 GO:0009707 GO:0009941 GO:0009987 GO:0009991 GO:0016020 GO:0016036 GO:0016740 GO:0016757 GO:0016758 GO:0019374 GO:0019752 GO:0019867 GO:0031090 GO:0031667 GO:0031668 GO:0031669 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032787 GO:0033554 GO:0035250 GO:0042170 GO:0042594 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044255 GO:0044281 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896 GO:0051716 GO:0071496 GO:0071704 GO:0098588 GO:0098805 GO:1901135 GO:1903509

KEGG Pathways

Metabolic & Signaling

ko00561 ko01100 map00561 map01100

Pfam Domains

Protein Families

Glyco_tran_28_C MGDG_synth

Protein Analysis

478

Amino Acids

53.82

Weight (kDa)

6.05

Isoelectric Point (pI)

40.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MGDG_synth	PF06925	90 - 258	6.1e-62	Monogalactosyldiacylglycerol (MGDG) synthase
Glyco_tran_28_C	PF04101	285 - 413	1.2e-10	Glycosyltransferase family 28 C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001366)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G11810 AT2G11810 AT2G11810 AT2G11810 AT5G20410
fragaria_vesca	FvH4_1g02220 FvH4_1g02220 FvH4_1g02220 FvH4_1g21680
malus_domestica	MD02G1020400.v1.1 MD15G1163200.v1.1
prunus_persica	Prupe.7G251400_v2.0.a1
pyrus_communis	pycom02g01790 pycom15g14680
rosa_chinensis	RchiOBHm_Chr2g0087331 RchiOBHm_Chr3g0481741 RchiOBHm_Chr4g0421821 RchiOBHm_Chr6g0246901
rosa_laevigata	RLG00000003836 RLG00000015857
rosa_multiflora	Rmu_co8187728.1_g000001 Rmu_co8222200.1_g000001 Rmu_sc0000540.1_g000032 Rmu_sc0003367.1_g000024 Rmu_sc0006064.1_g000001 Rmu_sc0007105.1_g000003 Rmu_sc0016592.1_g000001 Rmu_sc0037595.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028410 Rroxscaffold_2G00111080 Rroxscaffold_2G00153680 Rroxscaffold_3G00242830 Rroxscaffold_4G00276430 Rroxscaffold_4G00300210 Rroxscaffold_7G00214190
rosa_rugosa	Rorug01G0474200
rosa_samantha	Rh1CG122800 Rh2AG027800 Rh2AG631400 Rh2BG027300 Rh2BG300600 Rh2CG028100 Rh2DG027900 Rh4BG234200 Rh5CG220000 Rh6BG190700 Rh6CG106700 Rh6CG108200 Rh6DG097200 Rh6DG098600 Rh7CG224800
rosa_wichuraiana	Rw1G013320 Rw2G002200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	545
AarI	CACCTGC	1 cut(s)	659
Acc36I	ACCTGC	1 cut(s)	659
AccBSI	CCGCTC	1 cut(s)	223
AccI	GTMKAC	1 cut(s)	729
AccII	CGCG	3 cut(s)	273, 792, 794
AclWI	GGATC	3 cut(s)	454, 467, 816
AcoI	YGGCCR	2 cut(s)	265, 368
AcsI	RAATTY	1 cut(s)	398
AcyI	GRCGYC	2 cut(s)	14, 1212
AfaI	GTAC	4 cut(s)	359, 395, 530, 661
AfiI	CCNNNNNNNGG	3 cut(s)	142, 703, 1014
AflIII	ACRYGT	2 cut(s)	412, 752
AjnI	CCWGG	1 cut(s)	1102
AluBI	AGCT	8 cut(s)	81, 202, 218, 421, 938, 958, 1073, 1360
AluI	AGCT	8 cut(s)	81, 202, 218, 421, 938, 958, 1073, 1360
Alw21I	GWGCWC	2 cut(s)	204, 591
Alw26I	GTCTC	2 cut(s)	750, 1040
AlwI	GGATC	3 cut(s)	454, 467, 816
AlwNI	CAGNNNCTG	1 cut(s)	1103
Ama87I	CYCGRG	1 cut(s)	674
AoxI	GGCC	6 cut(s)	265, 285, 368, 601, 733, 1206
ApeKI	GCWGC	4 cut(s)	78, 418, 479, 955
ApoI	RAATTY	1 cut(s)	398
AspLEI	GCGC	3 cut(s)	275, 794, 1318
AspS9I	GGNCC	6 cut(s)	225, 835, 884, 1100, 1206, 1376
AsuC2I	CCSGG	3 cut(s)	675, 676, 1164
AsuHPI	GGTGA	3 cut(s)	329, 418, 1210
AvaI	CYCGRG	1 cut(s)	674
AvaII	GGWCC	5 cut(s)	225, 835, 884, 1100, 1376
AxyI	CCTNAGG	1 cut(s)	1323
BamHI	GGATCC	1 cut(s)	459
BanII	GRGCYC	3 cut(s)	204, 724, 910
BauI	CACGAG	2 cut(s)	203, 1355
BbsI	GAAGAC	1 cut(s)	1207
Bbv12I	GWGCWC	2 cut(s)	204, 591
BbvCI	CCTCAGC	1 cut(s)	282
BbvI	GCAGC	4 cut(s)	90, 430, 466, 967
BccI	CCATC	6 cut(s)	190, 450, 663, 706, 779, 1060
BceAI	ACGGC	3 cut(s)	112, 355, 748
BciT130I	CCWGG	1 cut(s)	1104
BclI	TGATCA	2 cut(s)	960, 1125
BcnI	CCSGG	3 cut(s)	675, 676, 1164
BcoDI	GTCTC	2 cut(s)	750, 1040
BfaI	CTAG	2 cut(s)	725, 1313
BfmI	CTRYAG	2 cut(s)	483, 605
BfuAI	ACCTGC	1 cut(s)	659
BisI	GCNGC	8 cut(s)	79, 262, 265, 419, 480, 489, 871, 956
BlpI	GCTNAGC	1 cut(s)	219
BlsI	GCNGC	8 cut(s)	80, 263, 266, 420, 481, 490, 872, 957
Bme1390I	CCNGG	4 cut(s)	675, 676, 1104, 1164
Bme18I	GGWCC	5 cut(s)	225, 835, 884, 1100, 1376
BmeT110I	CYCGRG	1 cut(s)	674
BmgT120I	GGNCC	6 cut(s)	225, 835, 884, 1100, 1206, 1376
BmiI	GGNNCC	4 cut(s)	461, 837, 885, 1207
BmrFI	CCNGG	4 cut(s)	675, 676, 1104, 1164
BmsI	GCATC	4 cut(s)	286, 555, 565, 1092
BpiI	GAAGAC	1 cut(s)	1207
BplI	GAGNNNNNCTC	4 cut(s)	459, 491, 810, 842
Bpu10I	CCTNAGC	2 cut(s)	74, 282
Bpu1102I	GCTNAGC	1 cut(s)	219
BpuEI	CTTGAG	2 cut(s)	71, 1022
BpuMI	CCSGG	3 cut(s)	675, 676, 1164
BsaHI	GRCGYC	2 cut(s)	14, 1212
BsaJI	CCNNGG	6 cut(s)	9, 501, 674, 675, 804, 1230
BsaXI	ACNNNNNCTCC	2 cut(s)	377, 407
Bsc4I	CCNNNNNNNGG	3 cut(s)	142, 703, 1014
Bse118I	RCCGGY	2 cut(s)	257, 1208
Bse1I	ACTGG	1 cut(s)	1025
Bse21I	CCTNAGG	1 cut(s)	1323
Bse3DI	GCAATG	1 cut(s)	1186
BseBI	CCWGG	1 cut(s)	1104
BseDI	CCNNGG	6 cut(s)	9, 501, 674, 675, 804, 1230
BseGI	GGATG	8 cut(s)	190, 349, 556, 670, 771, 1071, 1350, 1389
BseLI	CCNNNNNNNGG	3 cut(s)	142, 703, 1014
BseMI	GCAATG	1 cut(s)	1186
BseMII	CTCAG	5 cut(s)	65, 210, 273, 829, 1314
BseNI	ACTGG	1 cut(s)	1025
BseRI	GAGGAG	1 cut(s)	441
BseXI	GCAGC	4 cut(s)	90, 430, 466, 967
BsgI	GTGCAG	2 cut(s)	227, 437
Bsh1236I	CGCG	3 cut(s)	273, 792, 794
BshFI	GGCC	6 cut(s)	267, 287, 370, 603, 735, 1208
BsiHKAI	GWGCWC	2 cut(s)	204, 591
BsiHKCI	CYCGRG	1 cut(s)	674
BsiSI	CCGG	4 cut(s)	258, 675, 1164, 1209
BslFI	GGGAC	4 cut(s)	205, 897, 1146, 1212
BslI	CCNNNNNNNGG	3 cut(s)	142, 703, 1014
BsmAI	GTCTC	2 cut(s)	750, 1040
BsmFI	GGGAC	4 cut(s)	205, 897, 1146, 1212
BsmI	GAATGC	1 cut(s)	1306
BsnI	GGCC	6 cut(s)	267, 287, 370, 603, 735, 1208
BsoBI	CYCGRG	1 cut(s)	674
Bsp1286I	GDGCHC	4 cut(s)	204, 591, 724, 910
Bsp143I	GATC	4 cut(s)	459, 808, 960, 1125
Bsp1720I	GCTNAGC	1 cut(s)	219
BspANI	GGCC	6 cut(s)	267, 287, 370, 603, 735, 1208
BspCNI	CTCAG	5 cut(s)	66, 211, 274, 828, 1315
BspFNI	CGCG	3 cut(s)	273, 792, 794
BspHI	TCATGA	1 cut(s)	246
BspLI	GGNNCC	4 cut(s)	461, 837, 885, 1207
BspMAI	CTGCAG	1 cut(s)	609
BspMI	ACCTGC	1 cut(s)	659
BspPI	GGATC	3 cut(s)	454, 467, 816
BsrBI	CCGCTC	1 cut(s)	223
BsrDI	GCAATG	1 cut(s)	1186
BsrFI	RCCGGY	2 cut(s)	257, 1208
BsrI	ACTGG	1 cut(s)	1025
BssAI	RCCGGY	2 cut(s)	257, 1208
BssECI	CCNNGG	6 cut(s)	9, 501, 674, 675, 804, 1230
BssMI	GATC	4 cut(s)	459, 808, 960, 1125
BssNI	GRCGYC	2 cut(s)	14, 1212
BssSI	CACGAG	2 cut(s)	203, 1355
BssT1I	CCWWGG	3 cut(s)	501, 804, 1230
Bst2BI	CACGAG	2 cut(s)	203, 1355
Bst2UI	CCWGG	1 cut(s)	1104
Bst4CI	ACNGT	1 cut(s)	631
BstACI	GRCGYC	2 cut(s)	14, 1212
BstAPI	GCANNNNNTGC	1 cut(s)	604
BstC8I	GCNNGC	7 cut(s)	148, 605, 767, 790, 849, 1210, 1362
BstDEI	CTNAG	6 cut(s)	74, 219, 282, 815, 1307, 1323
BstDSI	CCRYGG	1 cut(s)	9
BstF5I	GGATG	8 cut(s)	190, 349, 556, 670, 771, 1071, 1350, 1389
BstFNI	CGCG	3 cut(s)	273, 792, 794
BstHHI	GCGC	3 cut(s)	275, 794, 1318
BstKTI	GATC	4 cut(s)	462, 811, 963, 1128
BstMAI	GTCTC	2 cut(s)	750, 1040
BstMBI	GATC	4 cut(s)	459, 808, 960, 1125
BstNI	CCWGG	1 cut(s)	1104
BstNSI	RCATGY	3 cut(s)	416, 756, 1402
BstSCI	CCNGG	4 cut(s)	673, 674, 1102, 1162
BstSFI	CTRYAG	2 cut(s)	483, 605
BstUI	CGCG	3 cut(s)	273, 792, 794
BstV1I	GCAGC	4 cut(s)	90, 430, 466, 967
BstV2I	GAAGAC	1 cut(s)	1207
BstX2I	RGATCY	1 cut(s)	459
BstXI	CCANNNNNNTGG	1 cut(s)	508
BstYI	RGATCY	1 cut(s)	459
Bsu36I	CCTNAGG	1 cut(s)	1323
BsuRI	GGCC	6 cut(s)	267, 287, 370, 603, 735, 1208
BtgI	CCRYGG	1 cut(s)	9
BtsCI	GGATG	8 cut(s)	190, 349, 556, 670, 771, 1071, 1350, 1389
BtsI	GCAGTG	1 cut(s)	990
BtsIMutI	CAGTG	4 cut(s)	556, 636, 990, 1032
BveI	ACCTGC	1 cut(s)	659
Cac8I	GCNNGC	7 cut(s)	148, 605, 767, 790, 849, 1210, 1362
CaiI	CAGNNNCTG	1 cut(s)	1103
CciI	TCATGA	1 cut(s)	246
CfoI	GCGC	3 cut(s)	275, 794, 1318
Cfr10I	RCCGGY	2 cut(s)	257, 1208
Cfr13I	GGNCC	6 cut(s)	225, 835, 884, 1100, 1206, 1376
Cfr9I	CCCGGG	1 cut(s)	674
CseI	GACGC	2 cut(s)	3, 1201
Csp6I	GTAC	4 cut(s)	358, 394, 529, 660
CviAII	CATG	8 cut(s)	247, 382, 403, 413, 663, 753, 862, 1399
CviQI	GTAC	4 cut(s)	358, 394, 529, 660
DdeI	CTNAG	6 cut(s)	74, 219, 282, 815, 1307, 1323
DpnI	GATC	4 cut(s)	461, 810, 962, 1127
DpnII	GATC	4 cut(s)	459, 808, 960, 1125
EaeI	YGGCCR	2 cut(s)	265, 368
EciI	GGCGGA	1 cut(s)	114
Ecl136II	GAGCTC	1 cut(s)	202
Eco130I	CCWWGG	3 cut(s)	501, 804, 1230
Eco147I	AGGCCT	1 cut(s)	603
Eco24I	GRGCYC	3 cut(s)	204, 724, 910
Eco32I	GATATC	1 cut(s)	154
Eco47I	GGWCC	5 cut(s)	225, 835, 884, 1100, 1376
Eco53kI	GAGCTC	1 cut(s)	202
Eco81I	CCTNAGG	1 cut(s)	1323
Eco88I	CYCGRG	1 cut(s)	674
EcoICRI	GAGCTC	1 cut(s)	202
EcoO109I	RGGNCCY	2 cut(s)	884, 1100
EcoRII	CCWGG	1 cut(s)	1102
EcoRV	GATATC	1 cut(s)	154
EcoT14I	CCWWGG	3 cut(s)	501, 804, 1230
EcoT38I	GRGCYC	3 cut(s)	204, 724, 910
ErhI	CCWWGG	3 cut(s)	501, 804, 1230
FaeI	CATG	8 cut(s)	250, 385, 406, 416, 666, 756, 865, 1402
FalI	AAGNNNNNCTT	2 cut(s)	221, 253
FaqI	GGGAC	4 cut(s)	205, 897, 1146, 1212
FatI	CATG	8 cut(s)	246, 381, 402, 412, 662, 752, 861, 1398
FauI	CCCGC	3 cut(s)	53, 797, 965
FauNDI	CATATG	1 cut(s)	968
FbaI	TGATCA	2 cut(s)	960, 1125
FblI	GTMKAC	1 cut(s)	729
Fnu4HI	GCNGC	8 cut(s)	79, 262, 265, 419, 480, 489, 871, 956
FokI	GGATG	8 cut(s)	197, 356, 543, 657, 758, 1078, 1337, 1376
FriOI	GRGCYC	3 cut(s)	204, 724, 910
Fsp4HI	GCNGC	8 cut(s)	79, 262, 265, 419, 480, 489, 871, 956
FspBI	CTAG	2 cut(s)	725, 1313
GlaI	GCGC	3 cut(s)	274, 793, 1317
GluI	GCNGC	8 cut(s)	79, 262, 265, 419, 480, 489, 871, 956
HaeIII	GGCC	6 cut(s)	267, 287, 370, 603, 735, 1208
HapII	CCGG	4 cut(s)	258, 675, 1164, 1209
HgaI	GACGC	2 cut(s)	3, 1201
HhaI	GCGC	3 cut(s)	275, 794, 1318
Hin1I	GRCGYC	2 cut(s)	14, 1212
Hin1II	CATG	8 cut(s)	250, 385, 406, 416, 666, 756, 865, 1402
Hin6I	GCGC	3 cut(s)	273, 792, 1316
HinP1I	GCGC	3 cut(s)	273, 792, 1316
HinfI	GANTC	4 cut(s)	241, 468, 743, 1004
HpaII	CCGG	4 cut(s)	258, 675, 1164, 1209
HphI	GGTGA	3 cut(s)	329, 418, 1210
Hpy166II	GTNNAC	3 cut(s)	360, 730, 1198
Hpy188I	TCNGA	4 cut(s)	776, 818, 1009, 1297
Hpy188III	TCNNGA	6 cut(s)	88, 238, 247, 293, 625, 1384
Hpy8I	GTNNAC	3 cut(s)	360, 730, 1198
Hpy99I	CGWCG	3 cut(s)	19, 161, 1414
HpyAV	CCTTC	6 cut(s)	34, 310, 334, 421, 869, 1024
HpyCH4III	ACNGT	1 cut(s)	631
HpyCH4IV	ACGT	2 cut(s)	234, 1372
HpyCH4V	TGCA	9 cut(s)	208, 418, 434, 556, 568, 607, 902, 1083, 1304
HpyF3I	CTNAG	6 cut(s)	74, 219, 282, 815, 1307, 1323
HpySE526I	ACGT	2 cut(s)	234, 1372
Hsp92I	GRCGYC	2 cut(s)	14, 1212
Hsp92II	CATG	8 cut(s)	250, 385, 406, 416, 666, 756, 865, 1402
HspAI	GCGC	3 cut(s)	273, 792, 1316
KroI	GCCGGC	1 cut(s)	1208
KroNI	GCCGGC	1 cut(s)	1210
Ksp22I	TGATCA	2 cut(s)	960, 1125
Kzo9I	GATC	4 cut(s)	459, 808, 960, 1125
LmnI	GCTCC	3 cut(s)	199, 215, 1070
Lsp1109I	GCAGC	4 cut(s)	90, 430, 466, 967
LweI	GCATC	4 cut(s)	286, 555, 565, 1092
MaeI	CTAG	2 cut(s)	725, 1313
MaeII	ACGT	2 cut(s)	234, 1372
MaeIII	GTNAC	2 cut(s)	317, 625
MalI	GATC	4 cut(s)	461, 810, 962, 1127
MbiI	CCGCTC	1 cut(s)	223
MboI	GATC	4 cut(s)	459, 808, 960, 1125
MboII	GAAGA	3 cut(s)	622, 833, 1207
MflI	RGATCY	1 cut(s)	459
MhlI	GDGCHC	4 cut(s)	204, 591, 724, 910
MluCI	AATT	2 cut(s)	398, 1425
MlyI	GAGTC	3 cut(s)	477, 752, 1013
MmeI	TCCRAC	3 cut(s)	799, 1275, 1393
MroNI	GCCGGC	1 cut(s)	1208
MseI	TTAA	2 cut(s)	374, 1424
MslI	CAYNNNNRTG	1 cut(s)	1025
MspA1I	CMGCKG	3 cut(s)	281, 421, 958
MspI	CCGG	4 cut(s)	258, 675, 1164, 1209
MspR9I	CCNGG	4 cut(s)	675, 676, 1104, 1164
Mva1269I	GAATGC	1 cut(s)	1306
MvaI	CCWGG	1 cut(s)	1104
MvnI	CGCG	3 cut(s)	273, 792, 794
NaeI	GCCGGC	1 cut(s)	1210
NciI	CCSGG	3 cut(s)	675, 676, 1164
NdeI	CATATG	1 cut(s)	968
NdeII	GATC	4 cut(s)	459, 808, 960, 1125
NgoMIV	GCCGGC	1 cut(s)	1208
NlaIII	CATG	8 cut(s)	250, 385, 406, 416, 666, 756, 865, 1402
NlaIV	GGNNCC	4 cut(s)	461, 837, 885, 1207
NmeAIII	GCCGAG	1 cut(s)	45
NmuCI	GTSAC	2 cut(s)	317, 625
NspI	RCATGY	3 cut(s)	416, 756, 1402
PagI	TCATGA	1 cut(s)	246
PaqCI	CACCTGC	1 cut(s)	659
PceI	AGGCCT	1 cut(s)	603
PciI	ACATGT	2 cut(s)	412, 752
PcsI	WCGNNNNNNNCGW	3 cut(s)	177, 738, 1415
PctI	GAATGC	1 cut(s)	1306
PdiI	GCCGGC	1 cut(s)	1210
PfeI	GAWTC	1 cut(s)	241
PflFI	GACNNNGTC	1 cut(s)	1340
PfoI	TCCNGGA	1 cut(s)	1162
PkrI	GCNGC	8 cut(s)	80, 263, 266, 420, 481, 490, 872, 957
PleI	GAGTC	3 cut(s)	476, 751, 1012
PpsI	GAGTC	3 cut(s)	476, 751, 1012
PpuMI	RGGWCCY	2 cut(s)	884, 1100
PscI	ACATGT	2 cut(s)	412, 752
PsiI	TTATAA	1 cut(s)	545
Psp124BI	GAGCTC	1 cut(s)	204
Psp5II	RGGWCCY	2 cut(s)	884, 1100
Psp6I	CCWGG	1 cut(s)	1102
PspGI	CCWGG	1 cut(s)	1102
PspN4I	GGNNCC	4 cut(s)	461, 837, 885, 1207
PspPI	GGNCC	6 cut(s)	225, 835, 884, 1100, 1206, 1376
PspPPI	RGGWCCY	2 cut(s)	884, 1100
PsrI	GAACNNNNNNTAC	2 cut(s)	1379, 1411
PstI	CTGCAG	1 cut(s)	609
PstNI	CAGNNNCTG	1 cut(s)	1103
PsuI	RGATCY	1 cut(s)	459
PsyI	GACNNNGTC	1 cut(s)	1340
PvuII	CAGCTG	2 cut(s)	421, 958
RsaI	GTAC	4 cut(s)	359, 395, 530, 661
RsaNI	GTAC	4 cut(s)	358, 394, 529, 660
RseI	CAYNNNNRTG	1 cut(s)	1025
SacI	GAGCTC	1 cut(s)	204
SaqAI	TTAA	2 cut(s)	374, 1424
SatI	GCNGC	8 cut(s)	79, 262, 265, 419, 480, 489, 871, 956
Sau3AI	GATC	4 cut(s)	459, 808, 960, 1125
Sau96I	GGNCC	6 cut(s)	225, 835, 884, 1100, 1206, 1376
SchI	GAGTC	3 cut(s)	477, 752, 1013
ScrFI	CCNGG	4 cut(s)	675, 676, 1104, 1164
SduI	GDGCHC	4 cut(s)	204, 591, 724, 910
SfaNI	GCATC	4 cut(s)	286, 555, 565, 1092
SfcI	CTRYAG	2 cut(s)	483, 605
SinI	GGWCC	5 cut(s)	225, 835, 884, 1100, 1376
SmaI	CCCGGG	1 cut(s)	676
SmiMI	CAYNNNNRTG	1 cut(s)	1025
SmlI	CTYRAG	2 cut(s)	86, 1001
SmoI	CTYRAG	2 cut(s)	86, 1001
Sse9I	AATT	2 cut(s)	398, 1425
SseBI	AGGCCT	1 cut(s)	603
SspMI	CTAG	2 cut(s)	725, 1313
SstI	GAGCTC	1 cut(s)	204
StuI	AGGCCT	1 cut(s)	603
StyD4I	CCNGG	4 cut(s)	673, 674, 1102, 1162
StyI	CCWWGG	3 cut(s)	501, 804, 1230
TaaI	ACNGT	1 cut(s)	631
TaiI	ACGT	2 cut(s)	237, 1375
TaqI	TCGA	5 cut(s)	156, 454, 828, 1335, 1418
TasI	AATT	2 cut(s)	398, 1425
TatI	WGTACW	2 cut(s)	357, 528
TauI	GCSGC	4 cut(s)	264, 267, 491, 873
TfiI	GAWTC	1 cut(s)	241
Tru1I	TTAA	2 cut(s)	374, 1424
Tru9I	TTAA	2 cut(s)	374, 1424
TscAI	CASTG	4 cut(s)	556, 643, 997, 1032
TseFI	GTSAC	2 cut(s)	317, 625
TseI	GCWGC	4 cut(s)	78, 418, 479, 955
Tsp45I	GTSAC	2 cut(s)	317, 625
TspDTI	ATGAA	3 cut(s)	391, 659, 1026
TspGWI	ACGGA	1 cut(s)	293
TspMI	CCCGGG	1 cut(s)	674
TspRI	CASTG	4 cut(s)	556, 643, 997, 1032
Tth111I	GACNNNGTC	1 cut(s)	1340
VpaK11BI	GGWCC	5 cut(s)	225, 835, 884, 1100, 1376
XapI	RAATTY	1 cut(s)	398
XceI	RCATGY	3 cut(s)	416, 756, 1402
XmaI	CCCGGG	1 cut(s)	674
XmiI	GTMKAC	1 cut(s)	729
XspI	CTAG	2 cut(s)	725, 1313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.