pycom15g14680

Monogalactosyldiacylglycerol synthase 2

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
10055899 .. 10058341
2443 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g14680.2

Sequence Viewer

Length: 1245 bp
ATGTCGGTGGAGTCGCCGAGAAAATCAATAACAGAGAAGGTGTTTGAGAGGGTTGGCGGGTATTCTTACCTGAGCAGCTACCTCAAGAACAACGGCGGCAGCCACAGCAGCCAGAGACACCACCGCCACAACCACCACAAGGCGTGCGAGAACGACGAGAGTGATGACGATTACTACGAGGACGAGGGGACGATGGAGCTCGTGCAGATTGGAGCTGAGAGGACCAAGAACGTCTTGATTCTCATGAGCGACACCGGTGGCGGCCACCGCGCTTCCTCCGAGGCCATTCGTGATGCCTTCCGCATGGAGTTTGGCGATGAATACAGGATATTTGTGAAGGATGTGTGGAAAGAGTACACAGGTTGGCCGTTAAACGACATGGAGAGATCGTACAAATTCATGGTGAAGCATGTGCAGCTGTGGAAGGTCGCATTTCACGGCACCTCTCCCCGATGGATCCACAGCGCCTATCTCGCCGCCATTGCAGCCTACTATGCCAAGTGCTACTGCCCCTCACAGGAGGTAGCGAAAAGGGCGCTAGTAGATGGCCTTGACGAGTCTCAGATACAGGTCTTTGGCCTGCCCATCCGGCCCTCTTTTGCTCGAGCGGTTCTCTCCAAGGATCCACTCAGAGAAGAACTCGAAATGGACCCTGACTTGCCGGCAGTTCTGCTCATGGGAGGTGGCGAAGGAATGGGGCCTGTAAAGGAAACTGCAAGGGCTCTCGGAGAGACACTCTTTGATAAAGAAGCTGGAAAACCAATTGGTCAGCTGATCATCATATGCGGGCGGAATAAAACCCTCGCTTCCACTCTTGAATCTGATGAATGGAACATTCCAGTGAAGGTTAGAGGATTTGAGACACAAATGGAAAAATGGATGGGAGCTTGTGACTGCATCATAACAAAGGCAGGACCTGGCACAATCGCAGAGGCATTAATCAGAGGGCTTCCAATTATCCTCAACGACTACATTCCCGGACAAGAAAAGGGCAATGTGCCTTATGTGGTGGACAATGGGGCCGGCGTCTTCACCAGAAGTCCCAAGGAAACTGCGAGGATTGTCGCGGAATGGTTCAGCACGAAAACAGACGAACTGAAAATGATGTCGGAGAATGCACTAAAACTAGCGCAACCTGAGGCTGTGTTCGACATTGTGAAGGACATCCACGAGCTTGCCCTCCAACGCGGTCCTATGGCGAACATCCCGTACATGCTGACATCTTCGTTTACGAGTTTAATCTGA

Protein Analysis

415

Amino Acids

46.32

Weight (kDa)

5.66

Isoelectric Point (pI)

42.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 440
AccBSI CCGCTC 1 cut(s) 608
AccII CGCG 3 cut(s) 270, 1067, 1188
AclWI GGATC 4 cut(s) 451, 464, 617, 630
AcoI YGGCCR 2 cut(s) 262, 365
AcsI RAATTY 1 cut(s) 395
AcyI GRCGYC 1 cut(s) 1026
AfaI GTAC 3 cut(s) 356, 392, 1211
AfiI CCNNNNNNNGG 2 cut(s) 139, 517
AgeI ACCGGT 1 cut(s) 254
AgsI TTSAA 1 cut(s) 818
AjnI CCWGG 1 cut(s) 916
AluBI AGCT 8 cut(s) 78, 199, 215, 418, 752, 772, 887, 1174
AluI AGCT 8 cut(s) 78, 199, 215, 418, 752, 772, 887, 1174
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 4 cut(s) 109, 564, 725, 854
AlwI GGATC 4 cut(s) 451, 464, 617, 630
AlwNI CAGNNNCTG 1 cut(s) 917
Ama87I CYCGRG 1 cut(s) 603
AoxI GGCC 8 cut(s) 262, 282, 365, 547, 577, 590, 698, 1020
ApeKI GCWGC 5 cut(s) 75, 99, 108, 415, 485
ApoI RAATTY 1 cut(s) 395
AseI ATTAAT 1 cut(s) 938
AsiGI ACCGGT 1 cut(s) 254
AspLEI GCGC 4 cut(s) 272, 467, 538, 1132
AspS9I GGNCC 7 cut(s) 222, 591, 649, 698, 914, 1020, 1190
AsuC2I CCSGG 1 cut(s) 978
AsuHPI GGTGA 2 cut(s) 415, 1024
AvaI CYCGRG 1 cut(s) 603
AvaII GGWCC 4 cut(s) 222, 649, 914, 1190
AxyI CCTNAGG 1 cut(s) 1137
BamHI GGATCC 2 cut(s) 456, 622
BanI GGYRCC 1 cut(s) 440
BanII GRGCYC 2 cut(s) 201, 724
BauI CACGAG 2 cut(s) 200, 1169
BbsI GAAGAC 1 cut(s) 1021
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 5 cut(s) 87, 111, 120, 427, 497
BccI CCATC 5 cut(s) 187, 447, 539, 593, 874
BceAI ACGGC 3 cut(s) 109, 352, 454
BciT130I CCWGG 1 cut(s) 918
BclI TGATCA 1 cut(s) 774
BcnI CCSGG 1 cut(s) 978
BcoDI GTCTC 4 cut(s) 109, 564, 725, 854
BfaI CTAG 2 cut(s) 539, 1127
BfoI RGCGCY 2 cut(s) 468, 539
BglI GCCNNNNNGGC 1 cut(s) 589
BisI GCNGC 8 cut(s) 76, 97, 100, 109, 262, 416, 477, 486
BlsI GCNGC 8 cut(s) 77, 98, 101, 110, 263, 417, 478, 487
Bme1390I CCNGG 2 cut(s) 918, 978
Bme18I GGWCC 4 cut(s) 222, 649, 914, 1190
BmeT110I CYCGRG 1 cut(s) 603
BmgT120I GGNCC 7 cut(s) 222, 591, 649, 698, 914, 1020, 1190
BmiI GGNNCC 6 cut(s) 442, 458, 624, 651, 699, 1021
BmrFI CCNGG 2 cut(s) 918, 978
BmsI GCATC 2 cut(s) 283, 906
BpiI GAAGAC 1 cut(s) 1021
BplI GAGNNNNNCTC 6 cut(s) 597, 629, 624, 656, 720, 752
Bpu10I CCTNAGC 1 cut(s) 71
BpuEI CTTGAG 1 cut(s) 68
BpuMI CCSGG 1 cut(s) 978
BsaHI GRCGYC 1 cut(s) 1026
BsaJI CCNNGG 3 cut(s) 279, 618, 1044
BsaWI WCCGGW 1 cut(s) 254
BsaXI ACNNNNNCTCC 2 cut(s) 374, 404
Bsc4I CCNNNNNNNGG 2 cut(s) 139, 517
Bse118I RCCGGY 3 cut(s) 254, 661, 1022
Bse1I ACTGG 1 cut(s) 839
Bse21I CCTNAGG 1 cut(s) 1137
Bse3DI GCAATG 2 cut(s) 480, 1000
BseBI CCWGG 1 cut(s) 918
BseDI CCNNGG 3 cut(s) 279, 618, 1044
BseGI GGATG 5 cut(s) 346, 585, 885, 1164, 1203
BseLI CCNNNNNNNGG 2 cut(s) 139, 517
BseMI GCAATG 2 cut(s) 480, 1000
BseMII CTCAG 5 cut(s) 62, 207, 575, 643, 1128
BseNI ACTGG 1 cut(s) 839
BseXI GCAGC 5 cut(s) 87, 111, 120, 427, 497
BsgI GTGCAG 2 cut(s) 224, 434
Bsh1236I CGCG 3 cut(s) 270, 1067, 1188
BshFI GGCC 8 cut(s) 264, 284, 367, 549, 579, 592, 700, 1022
BshNI GGYRCC 1 cut(s) 440
BshTI ACCGGT 1 cut(s) 254
BsiHKAI GWGCWC 1 cut(s) 201
BsiHKCI CYCGRG 1 cut(s) 603
BsiSI CCGG 5 cut(s) 255, 589, 662, 978, 1023
BslFI GGGAC 2 cut(s) 202, 1026
BslI CCNNNNNNNGG 2 cut(s) 139, 517
BsmAI GTCTC 4 cut(s) 109, 564, 725, 854
BsmFI GGGAC 2 cut(s) 202, 1026
BsmI GAATGC 1 cut(s) 1120
BsnI GGCC 8 cut(s) 264, 284, 367, 549, 579, 592, 700, 1022
BsoBI CYCGRG 1 cut(s) 603
Bsp1286I GDGCHC 2 cut(s) 201, 724
Bsp143I GATC 4 cut(s) 386, 456, 622, 774
BspANI GGCC 8 cut(s) 264, 284, 367, 549, 579, 592, 700, 1022
BspCNI CTCAG 5 cut(s) 63, 208, 574, 642, 1129
BspFNI CGCG 3 cut(s) 270, 1067, 1188
BspHI TCATGA 1 cut(s) 243
BspLI GGNNCC 6 cut(s) 442, 458, 624, 651, 699, 1021
BspPI GGATC 4 cut(s) 451, 464, 617, 630
BspT107I GGYRCC 1 cut(s) 440
BsrBI CCGCTC 1 cut(s) 608
BsrDI GCAATG 2 cut(s) 480, 1000
BsrFI RCCGGY 3 cut(s) 254, 661, 1022
BsrI ACTGG 1 cut(s) 839
BssAI RCCGGY 3 cut(s) 254, 661, 1022
BssECI CCNNGG 3 cut(s) 279, 618, 1044
BssMI GATC 4 cut(s) 386, 456, 622, 774
BssNI GRCGYC 1 cut(s) 1026
BssSI CACGAG 2 cut(s) 200, 1169
BssT1I CCWWGG 2 cut(s) 618, 1044
Bst2BI CACGAG 2 cut(s) 200, 1169
Bst2UI CCWGG 1 cut(s) 918
BstACI GRCGYC 1 cut(s) 1026
BstC8I GCNNGC 6 cut(s) 145, 581, 663, 788, 1024, 1176
BstDEI CTNAG 5 cut(s) 71, 216, 561, 629, 1137
BstF5I GGATG 5 cut(s) 346, 585, 885, 1164, 1203
BstFNI CGCG 3 cut(s) 270, 1067, 1188
BstH2I RGCGCY 2 cut(s) 468, 539
BstHHI GCGC 4 cut(s) 272, 467, 538, 1132
BstKTI GATC 4 cut(s) 389, 459, 625, 777
BstMAI GTCTC 4 cut(s) 109, 564, 725, 854
BstMBI GATC 4 cut(s) 386, 456, 622, 774
BstNI CCWGG 1 cut(s) 918
BstNSI RCATGY 2 cut(s) 413, 1216
BstSCI CCNGG 2 cut(s) 916, 976
BstUI CGCG 3 cut(s) 270, 1067, 1188
BstV1I GCAGC 5 cut(s) 87, 111, 120, 427, 497
BstV2I GAAGAC 1 cut(s) 1021
BstX2I RGATCY 2 cut(s) 456, 622
BstYI RGATCY 2 cut(s) 456, 622
Bsu36I CCTNAGG 1 cut(s) 1137
BsuRI GGCC 8 cut(s) 264, 284, 367, 549, 579, 592, 700, 1022
BtgZI GCGATG 1 cut(s) 330
BtsCI GGATG 5 cut(s) 346, 585, 885, 1164, 1203
BtsIMutI CAGTG 1 cut(s) 846
Cac8I GCNNGC 6 cut(s) 145, 581, 663, 788, 1024, 1176
CaiI CAGNNNCTG 1 cut(s) 917
CciI TCATGA 1 cut(s) 243
CfoI GCGC 4 cut(s) 272, 467, 538, 1132
Cfr10I RCCGGY 3 cut(s) 254, 661, 1022
Cfr13I GGNCC 7 cut(s) 222, 591, 649, 698, 914, 1020, 1190
CseI GACGC 1 cut(s) 1015
Csp6I GTAC 3 cut(s) 355, 391, 1210
CspAI ACCGGT 1 cut(s) 254
CviAII CATG 7 cut(s) 244, 304, 379, 400, 410, 676, 1213
CviQI GTAC 3 cut(s) 355, 391, 1210
DdeI CTNAG 5 cut(s) 71, 216, 561, 629, 1137
DpnI GATC 4 cut(s) 388, 458, 624, 776
DpnII GATC 4 cut(s) 386, 456, 622, 774
EaeI YGGCCR 2 cut(s) 262, 365
EciI GGCGGA 1 cut(s) 805
Ecl136II GAGCTC 1 cut(s) 199
Eco130I CCWWGG 2 cut(s) 618, 1044
Eco24I GRGCYC 2 cut(s) 201, 724
Eco47I GGWCC 4 cut(s) 222, 649, 914, 1190
Eco53kI GAGCTC 1 cut(s) 199
Eco81I CCTNAGG 1 cut(s) 1137
Eco88I CYCGRG 1 cut(s) 603
EcoICRI GAGCTC 1 cut(s) 199
EcoO109I RGGNCCY 2 cut(s) 698, 914
EcoRII CCWGG 1 cut(s) 916
EcoT14I CCWWGG 2 cut(s) 618, 1044
EcoT38I GRGCYC 2 cut(s) 201, 724
ErhI CCWWGG 2 cut(s) 618, 1044
FaeI CATG 7 cut(s) 247, 307, 382, 403, 413, 679, 1216
FalI AAGNNNNNCTT 2 cut(s) 218, 250
FaqI GGGAC 2 cut(s) 202, 1026
FatI CATG 7 cut(s) 243, 303, 378, 399, 409, 675, 1212
FauI CCCGC 2 cut(s) 50, 779
FauNDI CATATG 1 cut(s) 782
FbaI TGATCA 1 cut(s) 774
Fnu4HI GCNGC 8 cut(s) 76, 97, 100, 109, 262, 416, 477, 486
FokI GGATG 5 cut(s) 353, 572, 892, 1151, 1190
FriOI GRGCYC 2 cut(s) 201, 724
Fsp4HI GCNGC 8 cut(s) 76, 97, 100, 109, 262, 416, 477, 486
FspBI CTAG 2 cut(s) 539, 1127
GlaI GCGC 4 cut(s) 271, 466, 537, 1131
GluI GCNGC 8 cut(s) 76, 97, 100, 109, 262, 416, 477, 486
HaeII RGCGCY 2 cut(s) 468, 539
HaeIII GGCC 8 cut(s) 264, 284, 367, 549, 579, 592, 700, 1022
HapII CCGG 5 cut(s) 255, 589, 662, 978, 1023
HgaI GACGC 1 cut(s) 1015
HhaI GCGC 4 cut(s) 272, 467, 538, 1132
Hin1I GRCGYC 1 cut(s) 1026
Hin1II CATG 7 cut(s) 247, 307, 382, 403, 413, 679, 1216
Hin6I GCGC 4 cut(s) 270, 465, 536, 1130
HinP1I GCGC 4 cut(s) 270, 465, 536, 1130
HinfI GANTC 4 cut(s) 11, 238, 557, 818
HpaII CCGG 5 cut(s) 255, 589, 662, 978, 1023
HphI GGTGA 2 cut(s) 415, 1024
Hpy166II GTNNAC 3 cut(s) 357, 1012, 1230
Hpy188I TCNGA 8 cut(s) 280, 564, 632, 728, 823, 944, 1111, 1244
Hpy188III TCNNGA 5 cut(s) 85, 235, 244, 290, 815
Hpy8I GTNNAC 3 cut(s) 357, 1012, 1230
Hpy99I CGWCG 1 cut(s) 158
HpyAV CCTTC 7 cut(s) 31, 307, 331, 418, 683, 838, 1153
HpyCH4IV ACGT 1 cut(s) 231
HpyCH4V TGCA 6 cut(s) 205, 415, 485, 716, 897, 1118
HpyF3I CTNAG 5 cut(s) 71, 216, 561, 629, 1137
HpySE526I ACGT 1 cut(s) 231
Hsp92I GRCGYC 1 cut(s) 1026
Hsp92II CATG 7 cut(s) 247, 307, 382, 403, 413, 679, 1216
HspAI GCGC 4 cut(s) 270, 465, 536, 1130
KroI GCCGGC 2 cut(s) 661, 1022
KroNI GCCGGC 2 cut(s) 663, 1024
Ksp22I TGATCA 1 cut(s) 774
Kzo9I GATC 4 cut(s) 386, 456, 622, 774
LmnI GCTCC 3 cut(s) 196, 212, 884
Lsp1109I GCAGC 5 cut(s) 87, 111, 120, 427, 497
LweI GCATC 2 cut(s) 283, 906
MaeI CTAG 2 cut(s) 539, 1127
MaeII ACGT 1 cut(s) 231
MaeIII GTNAC 1 cut(s) 890
MalI GATC 4 cut(s) 388, 458, 624, 776
MbiI CCGCTC 1 cut(s) 608
MboI GATC 4 cut(s) 386, 456, 622, 774
MboII GAAGA 3 cut(s) 647, 1021, 1215
MfeI CAATTG 1 cut(s) 762
MflI RGATCY 2 cut(s) 456, 622
MhlI GDGCHC 2 cut(s) 201, 724
MluCI AATT 3 cut(s) 395, 762, 954
MlyI GAGTC 2 cut(s) 20, 566
MmeI TCCRAC 2 cut(s) 1089, 1207
MroNI GCCGGC 2 cut(s) 661, 1022
MseI TTAA 3 cut(s) 371, 938, 1238
MslI CAYNNNNRTG 1 cut(s) 839
MspA1I CMGCKG 2 cut(s) 418, 772
MspI CCGG 5 cut(s) 255, 589, 662, 978, 1023
MspR9I CCNGG 2 cut(s) 918, 978
MunI CAATTG 1 cut(s) 762
Mva1269I GAATGC 1 cut(s) 1120
MvaI CCWGG 1 cut(s) 918
MvnI CGCG 3 cut(s) 270, 1067, 1188
NaeI GCCGGC 2 cut(s) 663, 1024
NciI CCSGG 1 cut(s) 978
NdeI CATATG 1 cut(s) 782
NdeII GATC 4 cut(s) 386, 456, 622, 774
NgoMIV GCCGGC 2 cut(s) 661, 1022
NlaIII CATG 7 cut(s) 247, 307, 382, 403, 413, 679, 1216
NlaIV GGNNCC 6 cut(s) 442, 458, 624, 651, 699, 1021
NmeAIII GCCGAG 1 cut(s) 42
NmuCI GTSAC 1 cut(s) 890
NspI RCATGY 2 cut(s) 413, 1216
PaeR7I CTCGAG 1 cut(s) 603
PagI TCATGA 1 cut(s) 243
PcsI WCGNNNNNNNCGW 1 cut(s) 174
PctI GAATGC 1 cut(s) 1120
PdiI GCCGGC 2 cut(s) 663, 1024
PfeI GAWTC 2 cut(s) 238, 818
PfoI TCCNGGA 1 cut(s) 976
PinAI ACCGGT 1 cut(s) 254
PkrI GCNGC 8 cut(s) 77, 98, 101, 110, 263, 417, 478, 487
PleI GAGTC 2 cut(s) 19, 565
PpsI GAGTC 2 cut(s) 19, 565
PpuMI RGGWCCY 1 cut(s) 914
PshBI ATTAAT 1 cut(s) 938
Psp124BI GAGCTC 1 cut(s) 201
Psp5II RGGWCCY 1 cut(s) 914
Psp6I CCWGG 1 cut(s) 916
PspGI CCWGG 1 cut(s) 916
PspN4I GGNNCC 6 cut(s) 442, 458, 624, 651, 699, 1021
PspPI GGNCC 7 cut(s) 222, 591, 649, 698, 914, 1020, 1190
PspPPI RGGWCCY 1 cut(s) 914
PspXI VCTCGAGB 1 cut(s) 603
PsrI GAACNNNNNNTAC 2 cut(s) 1193, 1225
PstNI CAGNNNCTG 1 cut(s) 917
PsuI RGATCY 2 cut(s) 456, 622
PvuII CAGCTG 2 cut(s) 418, 772
RsaI GTAC 3 cut(s) 356, 392, 1211
RsaNI GTAC 3 cut(s) 355, 391, 1210
RseI CAYNNNNRTG 1 cut(s) 839
SacI GAGCTC 1 cut(s) 201
SaqAI TTAA 3 cut(s) 371, 938, 1238
SatI GCNGC 8 cut(s) 76, 97, 100, 109, 262, 416, 477, 486
Sau3AI GATC 4 cut(s) 386, 456, 622, 774
Sau96I GGNCC 7 cut(s) 222, 591, 649, 698, 914, 1020, 1190
SchI GAGTC 2 cut(s) 20, 566
ScrFI CCNGG 2 cut(s) 918, 978
SduI GDGCHC 2 cut(s) 201, 724
SfaNI GCATC 2 cut(s) 283, 906
Sfr274I CTCGAG 1 cut(s) 603
SgrAI CRCCGGYG 1 cut(s) 254
SinI GGWCC 4 cut(s) 222, 649, 914, 1190
SlaI CTCGAG 1 cut(s) 603
SmiMI CAYNNNNRTG 1 cut(s) 839
SmlI CTYRAG 2 cut(s) 83, 603
SmoI CTYRAG 2 cut(s) 83, 603
Sse9I AATT 3 cut(s) 395, 762, 954
SspMI CTAG 2 cut(s) 539, 1127
SstI GAGCTC 1 cut(s) 201
StyD4I CCNGG 2 cut(s) 916, 976
StyI CCWWGG 2 cut(s) 618, 1044
TaiI ACGT 1 cut(s) 234
TaqI TCGA 3 cut(s) 604, 642, 1149
TasI AATT 3 cut(s) 395, 762, 954
TatI WGTACW 1 cut(s) 354
TauI GCSGC 3 cut(s) 99, 264, 479
TfiI GAWTC 2 cut(s) 238, 818
Tru1I TTAA 3 cut(s) 371, 938, 1238
Tru9I TTAA 3 cut(s) 371, 938, 1238
TscAI CASTG 1 cut(s) 846
TseFI GTSAC 1 cut(s) 890
TseI GCWGC 5 cut(s) 75, 99, 108, 415, 485
Tsp45I GTSAC 1 cut(s) 890
TspDTI ATGAA 3 cut(s) 333, 388, 840
TspRI CASTG 1 cut(s) 846
VpaK11BI GGWCC 4 cut(s) 222, 649, 914, 1190
VspI ATTAAT 1 cut(s) 938
XapI RAATTY 1 cut(s) 395
XceI RCATGY 2 cut(s) 413, 1216
XhoI CTCGAG 1 cut(s) 603
XspI CTAG 2 cut(s) 539, 1127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.