Rh2BG300600

Monogalactosyldiacylglycerol synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
34699206 .. 34711514
12309 bp
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UTR
Exon/CDS
Intron
Rh2BG300600.1

Sequence Viewer

Length: 297 bp
ATGAAAGACCTTCTCCATCCCACTTATCCAGAAAAGGGCAATGTGCCATATGTGGTAGACAATGGTGCTGGTGTTTTCACCAGAAGCCCCAAGGAAACAGCCGGGATTGTGGCAGAATGGTTCAGCACCAAGCCGGATAAGCTCAAAAGGATGTCTGAGAATGCACTTAAACTAGCACAACCGGAGGCAGTTTTCGACATTGTTAATGACCTCGCCTGCCAACGTGGTCCTCTTGCAAACATCCCTTACATGCTGATATTAATATCAAGAACCAACTTGTTTTGTGTTTGGATATGA

Protein Analysis

98

Amino Acids

10.98

Weight (kDa)

7.76

Isoelectric Point (pI)

35.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 57
AfiI CCNNNNNNNGG 1 cut(s) 35
AluBI AGCT 1 cut(s) 142
AluI AGCT 1 cut(s) 142
AseI ATTAAT 1 cut(s) 260
AspS9I GGNCC 1 cut(s) 227
AsuC2I CCSGG 1 cut(s) 103
AsuHPI GGTGA 1 cut(s) 70
AvaII GGWCC 1 cut(s) 227
BccI CCATC 1 cut(s) 24
BcnI CCSGG 1 cut(s) 103
BfaI CTAG 1 cut(s) 173
Bme1390I CCNGG 1 cut(s) 103
Bme18I GGWCC 1 cut(s) 227
BmgT120I GGNCC 1 cut(s) 227
BmrFI CCNGG 1 cut(s) 103
BpuMI CCSGG 1 cut(s) 103
BsaJI CCNNGG 1 cut(s) 90
BsaWI WCCGGW 1 cut(s) 181
Bsc4I CCNNNNNNNGG 1 cut(s) 35
Bse3DI GCAATG 1 cut(s) 46
BseDI CCNNGG 1 cut(s) 90
BseGI GGATG 3 cut(s) 16, 156, 240
BseLI CCNNNNNNNGG 1 cut(s) 35
BseMI GCAATG 1 cut(s) 46
BseMII CTCAG 1 cut(s) 147
BsiSI CCGG 3 cut(s) 102, 134, 182
BslI CCNNNNNNNGG 1 cut(s) 35
BsmI GAATGC 1 cut(s) 166
BspCNI CTCAG 1 cut(s) 148
BsrDI GCAATG 1 cut(s) 46
BssECI CCNNGG 1 cut(s) 90
BssT1I CCWWGG 1 cut(s) 90
BstC8I GCNNGC 1 cut(s) 217
BstDEI CTNAG 1 cut(s) 156
BstF5I GGATG 3 cut(s) 16, 156, 240
BstMWI GCNNNNNNNGC 1 cut(s) 139
BstNSI RCATGY 1 cut(s) 253
BstSCI CCNGG 1 cut(s) 101
BtsCI GGATG 3 cut(s) 16, 156, 240
Cac8I GCNNGC 1 cut(s) 217
Cfr13I GGNCC 1 cut(s) 227
CviAII CATG 1 cut(s) 250
CviJI RGCY 4 cut(s) 87, 101, 133, 142
CviKI_1 RGCY 4 cut(s) 87, 101, 133, 142
DdeI CTNAG 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 90
Eco47I GGWCC 1 cut(s) 227
EcoT14I CCWWGG 1 cut(s) 90
ErhI CCWWGG 1 cut(s) 90
FaeI CATG 1 cut(s) 253
FaiI YATR 4 cut(s) 49, 51, 251, 295
FatI CATG 1 cut(s) 249
FauNDI CATATG 1 cut(s) 49
FblI GTMKAC 1 cut(s) 57
FokI GGATG 3 cut(s) 3, 163, 227
FspBI CTAG 1 cut(s) 173
HapII CCGG 3 cut(s) 102, 134, 182
Hin1II CATG 1 cut(s) 253
HpaII CCGG 3 cut(s) 102, 134, 182
HphI GGTGA 1 cut(s) 70
Hpy166II GTNNAC 1 cut(s) 58
Hpy188I TCNGA 1 cut(s) 157
Hpy188III TCNNGA 2 cut(s) 29, 267
Hpy8I GTNNAC 1 cut(s) 58
HpyAV CCTTC 1 cut(s) 20
HpyCH4IV ACGT 1 cut(s) 223
HpyCH4V TGCA 2 cut(s) 164, 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 139
HpyF3I CTNAG 1 cut(s) 156
HpySE526I ACGT 1 cut(s) 223
Hsp92II CATG 1 cut(s) 253
LpnPI CCDG 7 cut(s) 42, 54, 94, 115, 147, 195, 229
MaeI CTAG 1 cut(s) 173
MaeII ACGT 1 cut(s) 223
MnlI CCTC 3 cut(s) 178, 221, 240
MseI TTAA 3 cut(s) 168, 204, 260
MspI CCGG 3 cut(s) 102, 134, 182
MspR9I CCNGG 1 cut(s) 103
Mva1269I GAATGC 1 cut(s) 166
MwoI GCNNNNNNNGC 1 cut(s) 139
NciI CCSGG 1 cut(s) 103
NdeI CATATG 1 cut(s) 49
NlaIII CATG 1 cut(s) 253
NspI RCATGY 1 cut(s) 253
PctI GAATGC 1 cut(s) 166
PshBI ATTAAT 1 cut(s) 260
PspPI GGNCC 1 cut(s) 227
SaqAI TTAA 3 cut(s) 168, 204, 260
Sau96I GGNCC 1 cut(s) 227
ScrFI CCNGG 1 cut(s) 103
SetI ASST 4 cut(s) 12, 144, 213, 226
SinI GGWCC 1 cut(s) 227
SspMI CTAG 1 cut(s) 173
StyD4I CCNGG 1 cut(s) 101
StyI CCWWGG 1 cut(s) 90
TaiI ACGT 1 cut(s) 226
TaqI TCGA 1 cut(s) 195
Tru1I TTAA 3 cut(s) 168, 204, 260
Tru9I TTAA 3 cut(s) 168, 204, 260
TspDTI ATGAA 1 cut(s) 17
VpaK11BI GGWCC 1 cut(s) 227
VspI ATTAAT 1 cut(s) 260
XceI RCATGY 1 cut(s) 253
XmiI GTMKAC 1 cut(s) 57
XspI CTAG 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.