AT3G01300
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
Physical Location & Seq
Reverse (-)
90396 .. 93588
3193 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G01300.1

Sequence Viewer

Length: 1473 bp
ATGGGTTTCGATTCTGTTAAAGTTATGGAGAATTGGCAATCCAAGACATCTAATGAGAATGAGAAGAAGAAGAAGAAGCGGAGGAGGAAGAAGAACAACAATGTCAGAAACAGTGAACATTATGAAGAAGAAGCAAATGGGTGTTGGGTCAAATTTAGGTATATAGTCTGTTGCGCTTCTTCAACATCAGACGTTGAGACCTCTCTCACTCTCTCTACTAGCACTGTGGGAAGTCAGTCCGCAATTGTGCAATCAAATGACCAACCGGTTGGCCCAGTCTCTTCTACTACTACAACTAGCAATGCAGAAAGCTCTTTGTCCACTCCTATCATAAGTGAAGAACTTAACATCTATTCTCACCTTAAGAAGTTTTCTTTCATTGATCTCAAGTTGGCTACTAGAAATTTCAGACCTGAAAGCCTTCTCGGAGAAGGTGGCTTTGGTTGTGTCTTCAAAGGCTGGGTCGAGGAGAACGGAACTGCTCCTGTTAAGCCTGGCACTGGCCTTACTGTTGCCGTCAAAACCTTAAATCCTGATGGCCTTCAGGGTCATAAAGAGTGGCTTGCTGAGATTAATTATCTTGGTAATCTTCTCCATCCCAATCTTGTTAAACTGGTGGGTTATTGTATCGAAGATGATCAAAGGCTGCTTGTATATGAGTTTATGCCTCGAGGAAGTTTGGAGAATCACCTTTTCAGAAGGTCCTTGCCTCTTCCATGGTCAATTCGGATGAAGATTGCATTAGGTGCTGCAAAGGGTCTCAGTTTCCTTCACGAAGAAGCTTTAAAGCCGGTCATTTATCGAGATTTCAAAACCTCAAATATTTTACTGGATGGGGAGTACAATGCTAAATTATCAGATTTTGGGCTTGCCAAAGATGCTCCTGATGAAGGCAAAACTCATGTGTCTACTCGAGTCATGGGCACTTATGGTTACGCTGCCCCCGAGTATGTAATGACCGGTCACTTGACATCAAAAAGCGACGTTTACAGTTTCGGTGTGGTTCTTCTCGAAATGCTGACTGGTAGAAGATCAATGGACAAAAATCGACCAAACGGTGAACACAACCTCGTTGAATGGGCGAGACCGCATCTCCTGGACAAAAGAAGATTCTACCGGTTACTTGATCCGAGGCTGGAGGGTCATTTCTCAGTTAAAGGAGCACAAAAAGTGACTCAGCTTGCAGCACAATGCCTTAGCCGTGACTCCAAAATAAGACCCAAAATGAGTGAAGTGGTGGAAGTACTTAAGCCTCTCCCACACCTCAAGGACATGGCTAGCGCTTCTTACTACTTCCAGACAATGCAAGCTGAACGTTTGAAAGCTGGTTCTGGTTCTGGTTCTGGTCGTGGATTCGGGTCAAGAAACGGGCAACCAGTGTTTCGGACATTGTCTAGTCCTCATGGTCAAGCTGGTTCGTCGCCTTATCGTCATCAGATTCCGTCTCCTAAGCCTAAAGGTGCAACTACTTAG

Protein Analysis

490

Amino Acids

54.51

Weight (kDa)

9.4

Isoelectric Point (pI)

38.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 139 - 414 7.7e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 140 - 416 9.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 669
AccI GTMKAC 1 cut(s) 908
AciI CCGC 3 cut(s) 79, 240, 1088
AclI AACGTT 1 cut(s) 1315
AclWI GGATC 1 cut(s) 1121
AcsI RAATTY 2 cut(s) 152, 403
AcuI CTGAAG 1 cut(s) 527
AfaI GTAC 2 cut(s) 842, 1245
AfeI AGCGCT 1 cut(s) 1282
AfiI CCNNNNNNNGG 2 cut(s) 500, 890
AflII CTTAAG 2 cut(s) 362, 1247
AgeI ACCGGT 3 cut(s) 265, 959, 1116
AgsI TTSAA 5 cut(s) 183, 454, 811, 1076, 1321
AjnI CCWGG 2 cut(s) 493, 1095
AjuI GAANNNNNNNTTGG 2 cut(s) 423, 455
AluBI AGCT 6 cut(s) 312, 782, 1180, 1310, 1325, 1412
AluI AGCT 6 cut(s) 312, 782, 1180, 1310, 1325, 1412
Alw21I GWGCWC 1 cut(s) 1165
Alw26I GTCTC 5 cut(s) 191, 283, 764, 1078, 1449
AlwI GGATC 1 cut(s) 1121
Ama87I CYCGRG 3 cut(s) 669, 912, 944
Aor51HI AGCGCT 1 cut(s) 1282
AoxI GGCC 3 cut(s) 271, 502, 538
ApeKI GCWGC 4 cut(s) 646, 749, 938, 1184
ApoI RAATTY 2 cut(s) 152, 403
ArsI GACNNNNNNTTYG 2 cut(s) 447, 479
AseI ATTAAT 1 cut(s) 573
AsiGI ACCGGT 3 cut(s) 265, 959, 1116
Asp700I GAANNNNTTC 1 cut(s) 420
AspLEI GCGC 2 cut(s) 176, 1283
AspS9I GGNCC 2 cut(s) 272, 702
AsuHPI GGTGA 3 cut(s) 350, 680, 1070
AsuNHI GCTAGC 1 cut(s) 1277
AvaI CYCGRG 3 cut(s) 669, 912, 944
AvaII GGWCC 1 cut(s) 702
BaeGI GKGCMC 1 cut(s) 926
BbsI GAAGAC 1 cut(s) 442
Bbv12I GWGCWC 1 cut(s) 1165
BbvI GCAGC 4 cut(s) 633, 736, 925, 1196
BccI CCATC 3 cut(s) 530, 603, 827
BceAI ACGGC 2 cut(s) 500, 1185
BciT130I CCWGG 2 cut(s) 495, 1097
BclI TGATCA 1 cut(s) 637
BcoDI GTCTC 5 cut(s) 191, 283, 764, 1078, 1449
BfaI CTAG 5 cut(s) 219, 297, 399, 1278, 1395
BfoI RGCGCY 1 cut(s) 1284
BfrI CTTAAG 2 cut(s) 362, 1247
BisI GCNGC 4 cut(s) 647, 750, 939, 1185
BlsI GCNGC 4 cut(s) 648, 751, 940, 1186
BmcAI AGTACT 1 cut(s) 1245
Bme1390I CCNGG 2 cut(s) 495, 1097
Bme18I GGWCC 1 cut(s) 702
BmeT110I CYCGRG 3 cut(s) 669, 912, 944
BmgT120I GGNCC 2 cut(s) 272, 702
BmrFI CCNGG 2 cut(s) 495, 1097
BmrI ACTGGG 1 cut(s) 269
BmsI GCATC 2 cut(s) 868, 1099
BmtI GCTAGC 1 cut(s) 1281
BmuI ACTGGG 1 cut(s) 269
BpiI GAAGAC 1 cut(s) 442
BpmI CTGGAG 1 cut(s) 1157
Bpu10I CCTNAGC 2 cut(s) 1196, 1449
BpuEI CTTGAG 2 cut(s) 371, 1250
BsaI GGTCTC 3 cut(s) 191, 764, 1078
BsaJI CCNNGG 2 cut(s) 716, 1130
BsaWI WCCGGW 3 cut(s) 265, 959, 1116
BsaXI ACNNNNNCTCC 2 cut(s) 1077, 1107
Bsc4I CCNNNNNNNGG 2 cut(s) 500, 890
Bse118I RCCGGY 4 cut(s) 265, 790, 959, 1116
Bse1I ACTGG 6 cut(s) 275, 505, 618, 834, 1027, 1376
Bse3DI GCAATG 1 cut(s) 307
BseBI CCWGG 2 cut(s) 495, 1097
BseDI CCNNGG 2 cut(s) 716, 1130
BseGI GGATG 3 cut(s) 595, 735, 838
BseLI CCNNNNNNNGG 2 cut(s) 500, 890
BseMI GCAATG 1 cut(s) 307
BseMII CTCAG 4 cut(s) 558, 775, 1164, 1190
BseNI ACTGG 6 cut(s) 275, 505, 618, 834, 1027, 1376
BseRI GAGGAG 2 cut(s) 97, 482
BseSI GKGCMC 1 cut(s) 926
BseXI GCAGC 4 cut(s) 633, 736, 925, 1196
BseYI CCCAGC 1 cut(s) 459
BshFI GGCC 3 cut(s) 273, 504, 540
BshTI ACCGGT 3 cut(s) 265, 959, 1116
BsiHKAI GWGCWC 1 cut(s) 1165
BsiHKCI CYCGRG 3 cut(s) 669, 912, 944
BsiSI CCGG 4 cut(s) 266, 791, 960, 1117
BslI CCNNNNNNNGG 2 cut(s) 500, 890
BsmAI GTCTC 5 cut(s) 191, 283, 764, 1078, 1449
BsmBI CGTCTC 1 cut(s) 1449
BsnI GGCC 3 cut(s) 273, 504, 540
Bso31I GGTCTC 3 cut(s) 191, 764, 1078
BsoBI CYCGRG 3 cut(s) 669, 912, 944
Bsp1286I GDGCHC 2 cut(s) 926, 1165
Bsp143I GATC 4 cut(s) 382, 637, 1031, 1126
Bsp19I CCATGG 1 cut(s) 716
BspACI CCGC 3 cut(s) 79, 240, 1088
BspANI GGCC 3 cut(s) 273, 504, 540
BspCNI CTCAG 4 cut(s) 559, 774, 1163, 1189
BspOI GCTAGC 1 cut(s) 1281
BspPI GGATC 1 cut(s) 1121
BspTI CTTAAG 2 cut(s) 362, 1247
BspTNI GGTCTC 3 cut(s) 191, 764, 1078
BsrDI GCAATG 1 cut(s) 307
BsrFI RCCGGY 4 cut(s) 265, 790, 959, 1116
BsrI ACTGG 6 cut(s) 275, 505, 618, 834, 1027, 1376
BssAI RCCGGY 4 cut(s) 265, 790, 959, 1116
BssECI CCNNGG 2 cut(s) 716, 1130
BssMI GATC 4 cut(s) 382, 637, 1031, 1126
BssT1I CCWWGG 1 cut(s) 716
Bst2UI CCWGG 2 cut(s) 495, 1097
Bst4CI ACNGT 5 cut(s) 113, 226, 511, 992, 1058
Bst6I CTCTTC 2 cut(s) 286, 717
BstAFI CTTAAG 2 cut(s) 362, 1247
BstAPI GCANNNNNTGC 1 cut(s) 746
BstC8I GCNNGC 5 cut(s) 564, 870, 1182, 1279, 1308
BstDEI CTNAG 7 cut(s) 567, 761, 1150, 1176, 1196, 1449, 1470
BstDSI CCRYGG 1 cut(s) 716
BstENI CCTNNNNNAGG 1 cut(s) 888
BstF5I GGATG 3 cut(s) 595, 735, 838
BstH2I RGCGCY 1 cut(s) 1284
BstHHI GCGC 2 cut(s) 176, 1283
BstKTI GATC 4 cut(s) 385, 640, 1034, 1129
BstMAI GTCTC 5 cut(s) 191, 283, 764, 1078, 1449
BstMBI GATC 4 cut(s) 382, 637, 1031, 1126
BstMWI GCNNNNNNNGC 2 cut(s) 746, 878
BstNI CCWGG 2 cut(s) 495, 1097
BstSCI CCNGG 2 cut(s) 493, 1095
BstSLI GKGCMC 1 cut(s) 926
BstV1I GCAGC 4 cut(s) 633, 736, 925, 1196
BstV2I GAAGAC 1 cut(s) 442
BstXI CCANNNNNNTGG 1 cut(s) 269
BsuRI GGCC 3 cut(s) 273, 504, 540
BtgI CCRYGG 1 cut(s) 716
BtsCI GGATG 3 cut(s) 595, 735, 838
BtsIMutI CAGTG 4 cut(s) 118, 222, 498, 1383
Cac8I GCNNGC 5 cut(s) 564, 870, 1182, 1279, 1308
CfoI GCGC 2 cut(s) 176, 1283
Cfr10I RCCGGY 4 cut(s) 265, 790, 959, 1116
Cfr13I GGNCC 2 cut(s) 272, 702
Csp6I GTAC 2 cut(s) 841, 1244
CspAI ACCGGT 3 cut(s) 265, 959, 1116
CviAII CATG 5 cut(s) 717, 902, 919, 1273, 1403
CviQI GTAC 2 cut(s) 841, 1244
DdeI CTNAG 7 cut(s) 567, 761, 1150, 1176, 1196, 1449, 1470
DpnI GATC 4 cut(s) 384, 639, 1033, 1128
DpnII GATC 4 cut(s) 382, 637, 1031, 1126
DraI TTTAAA 1 cut(s) 786
Eam1104I CTCTTC 2 cut(s) 286, 717
EarI CTCTTC 2 cut(s) 286, 717
Eco130I CCWWGG 1 cut(s) 716
Eco31I GGTCTC 3 cut(s) 191, 764, 1078
Eco47I GGWCC 1 cut(s) 702
Eco47III AGCGCT 1 cut(s) 1282
Eco57I CTGAAG 1 cut(s) 527
Eco88I CYCGRG 3 cut(s) 669, 912, 944
EcoNI CCTNNNNNAGG 1 cut(s) 888
EcoO109I RGGNCCY 1 cut(s) 702
EcoRII CCWGG 2 cut(s) 493, 1095
EcoT14I CCWWGG 1 cut(s) 716
ErhI CCWWGG 1 cut(s) 716
Esp3I CGTCTC 1 cut(s) 1449
FaeI CATG 5 cut(s) 720, 905, 922, 1276, 1406
FalI AAGNNNNNCTT 2 cut(s) 546, 578
FatI CATG 5 cut(s) 716, 901, 918, 1272, 1402
FbaI TGATCA 1 cut(s) 637
FblI GTMKAC 1 cut(s) 908
Fnu4HI GCNGC 4 cut(s) 647, 750, 939, 1185
FokI GGATG 3 cut(s) 582, 742, 845
Fsp4HI GCNGC 4 cut(s) 647, 750, 939, 1185
FspBI CTAG 5 cut(s) 219, 297, 399, 1278, 1395
GlaI GCGC 2 cut(s) 175, 1282
GluI GCNGC 4 cut(s) 647, 750, 939, 1185
GsaI CCCAGC 1 cut(s) 463
GsuI CTGGAG 1 cut(s) 1157
HaeII RGCGCY 1 cut(s) 1284
HaeIII GGCC 3 cut(s) 273, 504, 540
HapII CCGG 4 cut(s) 266, 791, 960, 1117
HhaI GCGC 2 cut(s) 176, 1283
Hin1II CATG 5 cut(s) 720, 905, 922, 1276, 1406
Hin6I GCGC 2 cut(s) 174, 1281
HinP1I GCGC 2 cut(s) 174, 1281
HindIII AAGCTT 1 cut(s) 780
HinfI GANTC 8 cut(s) 11, 685, 915, 1110, 1174, 1205, 1353, 1438
HpaII CCGG 4 cut(s) 266, 791, 960, 1117
HphI GGTGA 3 cut(s) 350, 680, 1070
Hpy166II GTNNAC 5 cut(s) 116, 321, 909, 988, 1061
Hpy188III TCNNGA 7 cut(s) 533, 773, 803, 884, 1010, 1297, 1362
Hpy8I GTNNAC 5 cut(s) 116, 321, 909, 988, 1061
Hpy99I CGWCG 2 cut(s) 986, 1423
HpyAV CCTTC 6 cut(s) 425, 431, 551, 693, 779, 884
HpyCH4III ACNGT 5 cut(s) 113, 226, 511, 992, 1058
HpyCH4IV ACGT 3 cut(s) 192, 984, 1315
HpyCH4V TGCA 7 cut(s) 250, 305, 740, 752, 1184, 1306, 1463
HpyF10VI GCNNNNNNNGC 2 cut(s) 746, 878
HpyF3I CTNAG 7 cut(s) 567, 761, 1150, 1176, 1196, 1449, 1470
HpySE526I ACGT 3 cut(s) 192, 984, 1315
Hsp92II CATG 5 cut(s) 720, 905, 922, 1276, 1406
HspAI GCGC 2 cut(s) 174, 1281
Ksp22I TGATCA 1 cut(s) 637
Kzo9I GATC 4 cut(s) 382, 637, 1031, 1126
LmnI GCTCC 3 cut(s) 487, 886, 1160
Lsp1109I GCAGC 4 cut(s) 633, 736, 925, 1196
LweI GCATC 2 cut(s) 868, 1099
MaeI CTAG 5 cut(s) 219, 297, 399, 1278, 1395
MaeII ACGT 3 cut(s) 192, 984, 1315
MaeIII GTNAC 5 cut(s) 932, 962, 1119, 1171, 1202
MalI GATC 4 cut(s) 384, 639, 1033, 1128
MboI GATC 4 cut(s) 382, 637, 1031, 1126
MfeI CAATTG 1 cut(s) 243
MhlI GDGCHC 2 cut(s) 926, 1165
MluCI AATT 7 cut(s) 31, 152, 243, 403, 574, 723, 851
MlyI GAGTC 3 cut(s) 924, 1168, 1199
MroXI GAANNNNTTC 1 cut(s) 420
MspCI CTTAAG 2 cut(s) 362, 1247
MspI CCGG 4 cut(s) 266, 791, 960, 1117
MspR9I CCNGG 2 cut(s) 495, 1097
MunI CAATTG 1 cut(s) 243
MvaI CCWGG 2 cut(s) 495, 1097
MwoI GCNNNNNNNGC 2 cut(s) 746, 878
NcoI CCATGG 1 cut(s) 716
NdeII GATC 4 cut(s) 382, 637, 1031, 1126
NheI GCTAGC 1 cut(s) 1277
NlaIII CATG 5 cut(s) 720, 905, 922, 1276, 1406
NmuCI GTSAC 3 cut(s) 962, 1171, 1202
PaeR7I CTCGAG 2 cut(s) 669, 912
PcsI WCGNNNNNNNCGW 1 cut(s) 942
PdmI GAANNNNTTC 1 cut(s) 420
PfeI GAWTC 5 cut(s) 11, 685, 1110, 1353, 1438
PflFI GACNNNGTC 1 cut(s) 1390
PfoI TCCNGGA 1 cut(s) 1095
PinAI ACCGGT 3 cut(s) 265, 959, 1116
PkrI GCNGC 4 cut(s) 648, 751, 940, 1186
PleI GAGTC 3 cut(s) 923, 1168, 1199
PpsI GAGTC 3 cut(s) 923, 1168, 1199
PpuMI RGGWCCY 1 cut(s) 702
PshBI ATTAAT 1 cut(s) 573
Psp1406I AACGTT 1 cut(s) 1315
Psp5II RGGWCCY 1 cut(s) 702
Psp6I CCWGG 2 cut(s) 493, 1095
PspFI CCCAGC 1 cut(s) 459
PspGI CCWGG 2 cut(s) 493, 1095
PspPI GGNCC 2 cut(s) 272, 702
PspPPI RGGWCCY 1 cut(s) 702
PspXI VCTCGAGB 2 cut(s) 669, 912
PsyI GACNNNGTC 1 cut(s) 1390
RsaI GTAC 2 cut(s) 842, 1245
RsaNI GTAC 2 cut(s) 841, 1244
SatI GCNGC 4 cut(s) 647, 750, 939, 1185
Sau3AI GATC 4 cut(s) 382, 637, 1031, 1126
Sau96I GGNCC 2 cut(s) 272, 702
ScaI AGTACT 1 cut(s) 1245
SchI GAGTC 3 cut(s) 924, 1168, 1199
ScrFI CCNGG 2 cut(s) 495, 1097
SduI GDGCHC 2 cut(s) 926, 1165
SfaNI GCATC 2 cut(s) 868, 1099
Sfr274I CTCGAG 2 cut(s) 669, 912
SinI GGWCC 1 cut(s) 702
SlaI CTCGAG 2 cut(s) 669, 912
SmlI CTYRAG 6 cut(s) 362, 386, 669, 912, 1247, 1265
SmoI CTYRAG 6 cut(s) 362, 386, 669, 912, 1247, 1265
Sse9I AATT 7 cut(s) 31, 152, 243, 403, 574, 723, 851
SsiI CCGC 3 cut(s) 79, 240, 1088
SspI AATATT 1 cut(s) 823
SspMI CTAG 5 cut(s) 219, 297, 399, 1278, 1395
StyD4I CCNGG 2 cut(s) 493, 1095
StyI CCWWGG 1 cut(s) 716
TaaI ACNGT 5 cut(s) 113, 226, 511, 992, 1058
TaiI ACGT 3 cut(s) 195, 987, 1318
TaqI TCGA 8 cut(s) 9, 465, 630, 670, 802, 913, 1011, 1048
TasI AATT 7 cut(s) 31, 152, 243, 403, 574, 723, 851
TatI WGTACW 2 cut(s) 840, 1243
TfiI GAWTC 5 cut(s) 11, 685, 1110, 1353, 1438
TscAI CASTG 4 cut(s) 118, 229, 505, 1383
TseFI GTSAC 3 cut(s) 962, 1171, 1202
TseI GCWGC 4 cut(s) 646, 749, 938, 1184
Tsp45I GTSAC 3 cut(s) 962, 1171, 1202
TspDTI ATGAA 4 cut(s) 138, 367, 746, 903
TspGWI ACGGA 2 cut(s) 489, 1431
TspRI CASTG 4 cut(s) 118, 229, 505, 1383
Tth111I GACNNNGTC 1 cut(s) 1390
Vha464I CTTAAG 2 cut(s) 362, 1247
VpaK11BI GGWCC 1 cut(s) 702
VspI ATTAAT 1 cut(s) 573
XagI CCTNNNNNAGG 1 cut(s) 888
XapI RAATTY 2 cut(s) 152, 403
XhoI CTCGAG 2 cut(s) 669, 912
XmiI GTMKAC 1 cut(s) 908
XmnI GAANNNNTTC 1 cut(s) 420
XspI CTAG 5 cut(s) 219, 297, 399, 1278, 1395
ZrmI AGTACT 1 cut(s) 1245
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.