Prupe.1G267900_v2.0.a1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000641
Physical Location & Seq
Forward (+)
27526251 .. 27530411
4161 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G267900.3

Sequence Viewer

Length: 1527 bp
ATGGGTTTGGGAGCTGAGAATGGTAAAGTGGAGTCTTGGAGCATGTGCAAATCGAAGGTGAGGAAGAAGAAGAAGAAAGATGATGATGATGATGTGGAGGAAGAGGAGACTGGGTGTTGGGTTAGGCTGAGGTTCTTTGGGAGCTGCATTTCTTCAAGATCCAAAGTTGATAGCTCAATCAGTGGAACCAGTACTCACTGTGGATTCGCTAGGAGATGGTGGGAGCATGCAAATAAAATTGTGGTAGCAGTGGTGAGGATGTGTCATACTGAAACTAAATCTACAAATGATACAAGCAGAGACCAACCTACTGCTACTGTAGTCTCTTCCTCAACCACTAGTAACACAGAAAGTAATGCATCCACTTCCAAACTTGAAGAGGAACTGAAAGTTGCTTCGCGGTTACGAAAATTCACATTTAATGATCTTAAATTGGCAACAAGGAATTTCAGACCTGAAAGTCTTCTTGGTGAAGGTGGTTTTGGTTGTGTGTTCAAGGGGTGGATAGAAGAAAATGGAACTGCTCCAGTAAAACCTGGCACAGGGCTTACTGTTGCGGTTAAAACTCTTAACCATGATGGGCTTCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTTCCTTGGTGACCTTGTCCATCCAAACTTAGTTAAACTTATAGGATACTGCATTGAAGATGATCAAAGGCTGCTCGTGTATGAGTTCATGCCTCGAGGGAGTTTGGAGAACCATCTGTTTAGGAGGTCCTTGCCTCTTCCATGGTCAATTAGAATGAAAATTGCATTAGGTGCTGCTAAAGGTCTTGCTTTTCTTCACGAGGAAGCAGAAAGACCTGTTATATATCGGGATTTTAAAACTTCCAACATCTTATTGGATGCAGATTACAATGCCAAACTGTCTGACTTTGGACTTGCCAAAGATGGTCCTGAGGGTGATAAAACCCATGTCTCCACCCGTGTGATGGGAACTTATGGTTATGCAGCTCCAGAATATGTAATGACTGGACATCTTACATCCAGGAGTGATGTCTATAGTTTTGGCGTGGTTTTACTTGAGATGCTGACTGGCAGAAGATCTATGGACAAAAATCGACCGAATGGTGAACATAACCTTGTGGAATGGGCACGGCCACATTTAGGCGAGAGAAGAAGATTCTACCGATTGATAGACCCCCGGCTTGAAGGCCACTTTTCAATAAAAGGTGTCCAAAAAGCTGCACAACTAGCTGCCCATTGCCTTAGTCGAGATCCTAAAGCCAGGCCCCTAATGAGTGAAGTTGTTGAAGCCCTAAAGCCGCTGCCAAACCTCAAGGATATGGCAAGCTCATCATACTATTTCCAGACCATGCAAGCTGACCGCGTTGGGTCCAGCCCGAATACCAGAAATGGTGTCAGAACACAAGCAGGATTGCTAACAAGGAATGGGCATCATCAGCAGAGGAGCCTCTCAATACCAAATGGTTCCCATGCTTCTCCATATCACCATCAATATCCCCATCAATCACCAAAACCTAATAGCAAACCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

509

Amino Acids

56.88

Weight (kDa)

9.24

Isoelectric Point (pI)

39.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 459
AbsI CCTCGAGG 1 cut(s) 711
AccII CGCG 2 cut(s) 400, 1359
AciI CCGC 4 cut(s) 400, 557, 1295, 1357
AclWI GGATC 2 cut(s) 153, 1241
AcoI YGGCCR 1 cut(s) 1127
AcsI RAATTY 3 cut(s) 410, 445, 616
AcuI CTGAAG 2 cut(s) 569, 630
AfaI GTAC 1 cut(s) 193
AfiI CCNNNNNNNGG 3 cut(s) 542, 961, 1136
AgsI TTSAA 7 cut(s) 156, 377, 496, 674, 1181, 1194, 1283
AhlI ACTAGT 1 cut(s) 338
AjnI CCWGG 3 cut(s) 535, 1016, 1256
AjuI GAANNNNNNNTTGG 4 cut(s) 450, 465, 482, 497
AleI CACNNNNGTG 1 cut(s) 956
AluBI AGCT 8 cut(s) 14, 144, 174, 983, 1214, 1226, 1323, 1352
AluI AGCT 8 cut(s) 14, 144, 174, 983, 1214, 1226, 1323, 1352
Alw26I GTCTC 4 cut(s) 101, 294, 328, 952
AlwI GGATC 2 cut(s) 153, 1241
Ama87I CYCGRG 1 cut(s) 711
AoxI GGCC 3 cut(s) 1127, 1183, 1259
ApeKI GCWGC 7 cut(s) 144, 688, 791, 980, 1214, 1226, 1297
ApoI RAATTY 3 cut(s) 410, 445, 616
Asp700I GAANNNNTTC 1 cut(s) 462
AspS9I GGNCC 4 cut(s) 744, 923, 1260, 1365
AsuC2I CCSGG 1 cut(s) 1174
AsuHPI GGTGA 8 cut(s) 70, 265, 482, 638, 944, 1112, 1472, 1494
AvaI CYCGRG 1 cut(s) 711
AvaII GGWCC 3 cut(s) 744, 923, 1365
AxyI CCTNAGG 1 cut(s) 927
BaeGI GKGCMC 1 cut(s) 1126
BauI CACGAG 2 cut(s) 692, 815
BbsI GAAGAC 1 cut(s) 455
BbvCI CCTCAGC 1 cut(s) 128
BbvI GCAGC 7 cut(s) 131, 675, 778, 992, 1201, 1213, 1284
BccI CCATC 8 cut(s) 210, 572, 645, 738, 914, 955, 1491, 1503
BceAI ACGGC 1 cut(s) 1142
BciT130I CCWGG 3 cut(s) 537, 1018, 1258
BciVI GTATCC 1 cut(s) 656
BclI TGATCA 1 cut(s) 679
BcnI CCSGG 1 cut(s) 1174
BcoDI GTCTC 4 cut(s) 101, 294, 328, 952
BcuI ACTAGT 1 cut(s) 338
BfaI CTAG 3 cut(s) 210, 339, 1223
BfmI CTRYAG 2 cut(s) 318, 1030
BfuI GTATCC 1 cut(s) 656
BglII AGATCT 1 cut(s) 1073
BisI GCNGC 8 cut(s) 145, 689, 792, 981, 1215, 1227, 1295, 1298
BlsI GCNGC 8 cut(s) 146, 690, 793, 982, 1216, 1228, 1296, 1299
BmcAI AGTACT 1 cut(s) 193
Bme1390I CCNGG 4 cut(s) 537, 1018, 1174, 1258
Bme18I GGWCC 3 cut(s) 744, 923, 1365
BmeT110I CYCGRG 1 cut(s) 711
BmgT120I GGNCC 4 cut(s) 744, 923, 1260, 1365
BmiI GGNNCC 5 cut(s) 187, 1262, 1366, 1442, 1462
BmrFI CCNGG 4 cut(s) 537, 1018, 1174, 1258
BmrI ACTGGG 1 cut(s) 120
BmsI GCATC 4 cut(s) 368, 865, 1047, 1435
BmuI ACTGGG 1 cut(s) 120
BpiI GAAGAC 1 cut(s) 455
BpmI CTGGAG 2 cut(s) 510, 969
Bpu10I CCTNAGC 1 cut(s) 128
BpuEI CTTGAG 2 cut(s) 1073, 1292
BpuMI CCSGG 1 cut(s) 1174
BsaI GGTCTC 1 cut(s) 294
BsaJI CCNNGG 3 cut(s) 622, 758, 1172
BsaXI ACNNNNNCTCC 2 cut(s) 98, 128
Bsc4I CCNNNNNNNGG 3 cut(s) 542, 961, 1136
Bse1I ACTGG 5 cut(s) 115, 189, 527, 1006, 1069
Bse21I CCTNAGG 1 cut(s) 927
Bse3DI GCAATG 1 cut(s) 1231
BseBI CCWGG 3 cut(s) 537, 1018, 1258
BseDI CCNNGG 3 cut(s) 622, 758, 1172
BseGI GGATG 5 cut(s) 264, 359, 637, 880, 1013
BseLI CCNNNNNNNGG 3 cut(s) 542, 961, 1136
BseMI GCAATG 1 cut(s) 1231
BseMII CTCAG 3 cut(s) 6, 119, 918
BseNI ACTGG 5 cut(s) 115, 189, 527, 1006, 1069
BseRI GAGGAG 2 cut(s) 119, 1453
BseSI GKGCMC 1 cut(s) 1126
BseXI GCAGC 7 cut(s) 131, 675, 778, 992, 1201, 1213, 1284
BsgI GTGCAG 1 cut(s) 1200
Bsh1236I CGCG 2 cut(s) 400, 1359
Bsh1285I CGRYCG 1 cut(s) 1094
BshFI GGCC 3 cut(s) 1129, 1185, 1261
BsiEI CGRYCG 1 cut(s) 1094
BsiHKCI CYCGRG 1 cut(s) 711
BsiSI CCGG 1 cut(s) 1174
BslI CCNNNNNNNGG 3 cut(s) 542, 961, 1136
BsmAI GTCTC 4 cut(s) 101, 294, 328, 952
BsnI GGCC 3 cut(s) 1129, 1185, 1261
Bso31I GGTCTC 1 cut(s) 294
BsoBI CYCGRG 1 cut(s) 711
Bsp1286I GDGCHC 1 cut(s) 1126
Bsp143I GATC 5 cut(s) 158, 424, 679, 1073, 1246
Bsp19I CCATGG 1 cut(s) 758
BspACI CCGC 4 cut(s) 400, 557, 1295, 1357
BspANI GGCC 3 cut(s) 1129, 1185, 1261
BspCNI CTCAG 3 cut(s) 7, 120, 919
BspFNI CGCG 2 cut(s) 400, 1359
BspLI GGNNCC 5 cut(s) 187, 1262, 1366, 1442, 1462
BspPI GGATC 2 cut(s) 153, 1241
BspTNI GGTCTC 1 cut(s) 294
BsrDI GCAATG 1 cut(s) 1231
BsrI ACTGG 5 cut(s) 115, 189, 527, 1006, 1069
BssECI CCNNGG 3 cut(s) 622, 758, 1172
BssMI GATC 5 cut(s) 158, 424, 679, 1073, 1246
BssSI CACGAG 2 cut(s) 692, 815
BssT1I CCWWGG 2 cut(s) 622, 758
Bst2BI CACGAG 2 cut(s) 692, 815
Bst2UI CCWGG 3 cut(s) 537, 1018, 1258
Bst4CI ACNGT 4 cut(s) 200, 319, 553, 897
Bst6I CTCTTC 4 cut(s) 96, 331, 372, 759
BstAPI GCANNNNNTGC 1 cut(s) 788
BstC8I GCNNGC 4 cut(s) 228, 606, 1321, 1350
BstDEI CTNAG 5 cut(s) 15, 128, 646, 927, 1238
BstDSI CCRYGG 1 cut(s) 758
BstEII GGTNACC 1 cut(s) 626
BstENI CCTNNNNNAGG 1 cut(s) 540
BstF5I GGATG 5 cut(s) 264, 359, 637, 880, 1013
BstFNI CGCG 2 cut(s) 400, 1359
BstKTI GATC 5 cut(s) 161, 427, 682, 1076, 1249
BstMAI GTCTC 4 cut(s) 101, 294, 328, 952
BstMBI GATC 5 cut(s) 158, 424, 679, 1073, 1246
BstMCI CGRYCG 1 cut(s) 1094
BstMWI GCNNNNNNNGC 3 cut(s) 788, 1223, 1432
BstNI CCWGG 3 cut(s) 537, 1018, 1258
BstNSI RCATGY 2 cut(s) 46, 230
BstPI GGTNACC 1 cut(s) 626
BstSCI CCNGG 4 cut(s) 535, 1016, 1172, 1256
BstSFI CTRYAG 2 cut(s) 318, 1030
BstSLI GKGCMC 1 cut(s) 1126
BstUI CGCG 2 cut(s) 400, 1359
BstV1I GCAGC 7 cut(s) 131, 675, 778, 992, 1201, 1213, 1284
BstV2I GAAGAC 1 cut(s) 455
BstX2I RGATCY 3 cut(s) 158, 1073, 1246
BstYI RGATCY 3 cut(s) 158, 1073, 1246
Bsu36I CCTNAGG 1 cut(s) 927
BsuI GTATCC 1 cut(s) 656
BsuRI GGCC 3 cut(s) 1129, 1185, 1261
BtgI CCRYGG 1 cut(s) 758
BtsCI GGATG 5 cut(s) 264, 359, 637, 880, 1013
BtsI GCAGTG 1 cut(s) 255
BtsIMutI CAGTG 3 cut(s) 187, 196, 255
Cac8I GCNNGC 4 cut(s) 228, 606, 1321, 1350
Cfr13I GGNCC 4 cut(s) 744, 923, 1260, 1365
Csp6I GTAC 1 cut(s) 192
CviAII CATG 8 cut(s) 43, 227, 575, 706, 759, 944, 1345, 1466
CviQI GTAC 1 cut(s) 192
DdeI CTNAG 5 cut(s) 15, 128, 646, 927, 1238
DpnI GATC 5 cut(s) 160, 426, 681, 1075, 1248
DpnII GATC 5 cut(s) 158, 424, 679, 1073, 1246
DraI TTTAAA 1 cut(s) 853
DrdI GACNNNNNNGTC 1 cut(s) 459
DseDI GACNNNNNNGTC 1 cut(s) 459
EaeI YGGCCR 1 cut(s) 1127
Eam1104I CTCTTC 4 cut(s) 96, 331, 372, 759
EarI CTCTTC 4 cut(s) 96, 331, 372, 759
Eco130I CCWWGG 2 cut(s) 622, 758
Eco31I GGTCTC 1 cut(s) 294
Eco47I GGWCC 3 cut(s) 744, 923, 1365
Eco57I CTGAAG 2 cut(s) 569, 630
Eco81I CCTNAGG 1 cut(s) 927
Eco88I CYCGRG 1 cut(s) 711
Eco91I GGTNACC 1 cut(s) 626
EcoNI CCTNNNNNAGG 1 cut(s) 540
EcoO109I RGGNCCY 2 cut(s) 744, 1260
EcoO65I GGTNACC 1 cut(s) 626
EcoRII CCWGG 3 cut(s) 535, 1016, 1256
EcoT14I CCWWGG 2 cut(s) 622, 758
EcoT22I ATGCAT 1 cut(s) 361
ErhI CCWWGG 2 cut(s) 622, 758
FaeI CATG 8 cut(s) 46, 230, 578, 709, 762, 947, 1348, 1469
FatI CATG 8 cut(s) 42, 226, 574, 705, 758, 943, 1344, 1465
FbaI TGATCA 1 cut(s) 679
Fnu4HI GCNGC 8 cut(s) 145, 689, 792, 981, 1215, 1227, 1295, 1298
FokI GGATG 5 cut(s) 271, 346, 624, 887, 1000
Fsp4HI GCNGC 8 cut(s) 145, 689, 792, 981, 1215, 1227, 1295, 1298
FspBI CTAG 3 cut(s) 210, 339, 1223
GluI GCNGC 8 cut(s) 145, 689, 792, 981, 1215, 1227, 1295, 1298
GsuI CTGGAG 2 cut(s) 510, 969
HaeIII GGCC 3 cut(s) 1129, 1185, 1261
HapII CCGG 1 cut(s) 1174
Hin1II CATG 8 cut(s) 46, 230, 578, 709, 762, 947, 1348, 1469
HinfI GANTC 3 cut(s) 32, 204, 1152
HpaII CCGG 1 cut(s) 1174
HphI GGTGA 8 cut(s) 70, 265, 482, 638, 944, 1112, 1472, 1494
Hpy166II GTNNAC 1 cut(s) 1103
Hpy188I TCNGA 3 cut(s) 452, 901, 1394
Hpy188III TCNNGA 7 cut(s) 156, 815, 845, 926, 986, 1244, 1339
Hpy8I GTNNAC 1 cut(s) 1103
HpyAV CCTTC 3 cut(s) 49, 467, 1175
HpyCH4III ACNGT 4 cut(s) 200, 319, 553, 897
HpyF10VI GCNNNNNNNGC 3 cut(s) 788, 1223, 1432
HpyF3I CTNAG 5 cut(s) 15, 128, 646, 927, 1238
Hsp92II CATG 8 cut(s) 46, 230, 578, 709, 762, 947, 1348, 1469
Ksp22I TGATCA 1 cut(s) 679
Kzo9I GATC 5 cut(s) 158, 424, 679, 1073, 1246
LmnI GCTCC 7 cut(s) 11, 39, 141, 223, 529, 988, 1440
Lsp1109I GCAGC 7 cut(s) 131, 675, 778, 992, 1201, 1213, 1284
LweI GCATC 4 cut(s) 368, 865, 1047, 1435
MaeI CTAG 3 cut(s) 210, 339, 1223
MaeIII GTNAC 3 cut(s) 341, 402, 626
MalI GATC 5 cut(s) 160, 426, 681, 1075, 1248
MboI GATC 5 cut(s) 158, 424, 679, 1073, 1246
MflI RGATCY 3 cut(s) 158, 1073, 1246
MhlI GDGCHC 1 cut(s) 1126
MluCI AATT 7 cut(s) 237, 410, 431, 445, 616, 765, 777
MlyI GAGTC 1 cut(s) 41
MmeI TCCRAC 1 cut(s) 885
Mph1103I ATGCAT 1 cut(s) 361
MroXI GAANNNNTTC 1 cut(s) 462
MseI TTAA 7 cut(s) 420, 429, 561, 570, 651, 852, 1525
MslI CAYNNNNRTG 1 cut(s) 956
MspA1I CMGCKG 1 cut(s) 1297
MspI CCGG 1 cut(s) 1174
MspR9I CCNGG 4 cut(s) 537, 1018, 1174, 1258
MvaI CCWGG 3 cut(s) 537, 1018, 1258
MvnI CGCG 2 cut(s) 400, 1359
MwoI GCNNNNNNNGC 3 cut(s) 788, 1223, 1432
NciI CCSGG 1 cut(s) 1174
NcoI CCATGG 1 cut(s) 758
NdeII GATC 5 cut(s) 158, 424, 679, 1073, 1246
NlaIII CATG 8 cut(s) 46, 230, 578, 709, 762, 947, 1348, 1469
NlaIV GGNNCC 5 cut(s) 187, 1262, 1366, 1442, 1462
NmuCI GTSAC 1 cut(s) 626
NsiI ATGCAT 1 cut(s) 361
NspI RCATGY 2 cut(s) 46, 230
OliI CACNNNNGTG 1 cut(s) 956
PaeI GCATGC 1 cut(s) 230
PaeR7I CTCGAG 1 cut(s) 711
PdmI GAANNNNTTC 1 cut(s) 462
PfeI GAWTC 2 cut(s) 204, 1152
PflFI GACNNNGTC 1 cut(s) 632
PfoI TCCNGGA 1 cut(s) 1016
PkrI GCNGC 8 cut(s) 146, 690, 793, 982, 1216, 1228, 1296, 1299
PleI GAGTC 1 cut(s) 40
PpsI GAGTC 1 cut(s) 40
PpuMI RGGWCCY 1 cut(s) 744
Psp5II RGGWCCY 1 cut(s) 744
Psp6I CCWGG 3 cut(s) 535, 1016, 1256
PspEI GGTNACC 1 cut(s) 626
PspGI CCWGG 3 cut(s) 535, 1016, 1256
PspN4I GGNNCC 5 cut(s) 187, 1262, 1366, 1442, 1462
PspPI GGNCC 4 cut(s) 744, 923, 1260, 1365
PspPPI RGGWCCY 1 cut(s) 744
PspXI VCTCGAGB 1 cut(s) 711
PsuI RGATCY 3 cut(s) 158, 1073, 1246
PsyI GACNNNGTC 1 cut(s) 632
RsaI GTAC 1 cut(s) 193
RsaNI GTAC 1 cut(s) 192
RseI CAYNNNNRTG 1 cut(s) 956
SaqAI TTAA 7 cut(s) 420, 429, 561, 570, 651, 852, 1525
SatI GCNGC 8 cut(s) 145, 689, 792, 981, 1215, 1227, 1295, 1298
Sau3AI GATC 5 cut(s) 158, 424, 679, 1073, 1246
Sau96I GGNCC 4 cut(s) 744, 923, 1260, 1365
ScaI AGTACT 1 cut(s) 193
SchI GAGTC 1 cut(s) 41
ScrFI CCNGG 4 cut(s) 537, 1018, 1174, 1258
SduI GDGCHC 1 cut(s) 1126
SfaNI GCATC 4 cut(s) 368, 865, 1047, 1435
SfcI CTRYAG 2 cut(s) 318, 1030
Sfr274I CTCGAG 1 cut(s) 711
SinI GGWCC 3 cut(s) 744, 923, 1365
SlaI CTCGAG 1 cut(s) 711
SmiMI CAYNNNNRTG 1 cut(s) 956
SmlI CTYRAG 3 cut(s) 711, 1052, 1307
SmoI CTYRAG 3 cut(s) 711, 1052, 1307
SpeI ACTAGT 1 cut(s) 338
SphI GCATGC 1 cut(s) 230
Sse9I AATT 7 cut(s) 237, 410, 431, 445, 616, 765, 777
SsiI CCGC 4 cut(s) 400, 557, 1295, 1357
SspMI CTAG 3 cut(s) 210, 339, 1223
StyD4I CCNGG 4 cut(s) 535, 1016, 1172, 1256
StyI CCWWGG 2 cut(s) 622, 758
TaaI ACNGT 4 cut(s) 200, 319, 553, 897
TaqI TCGA 4 cut(s) 53, 712, 1090, 1243
TaqII GACCGA 1 cut(s) 1108
TasI AATT 7 cut(s) 237, 410, 431, 445, 616, 765, 777
TatI WGTACW 1 cut(s) 191
TauI GCSGC 1 cut(s) 1297
TfiI GAWTC 2 cut(s) 204, 1152
Tru1I TTAA 7 cut(s) 420, 429, 561, 570, 651, 852, 1525
Tru9I TTAA 7 cut(s) 420, 429, 561, 570, 651, 852, 1525
TscAI CASTG 3 cut(s) 187, 203, 255
TseFI GTSAC 1 cut(s) 626
TseI GCWGC 7 cut(s) 144, 688, 791, 980, 1214, 1226, 1297
Tsp45I GTSAC 1 cut(s) 626
TspDTI ATGAA 2 cut(s) 694, 788
TspRI CASTG 3 cut(s) 187, 203, 255
Tth111I GACNNNGTC 1 cut(s) 632
VpaK11BI GGWCC 3 cut(s) 744, 923, 1365
XagI CCTNNNNNAGG 1 cut(s) 540
XapI RAATTY 3 cut(s) 410, 445, 616
XceI RCATGY 2 cut(s) 46, 230
XcmI CCANNNNNNNNNTGG 2 cut(s) 868, 958
XhoI CTCGAG 1 cut(s) 711
XmnI GAANNNNTTC 1 cut(s) 462
XspI CTAG 3 cut(s) 210, 339, 1223
ZrmI AGTACT 1 cut(s) 193
Zsp2I ATGCAT 1 cut(s) 361
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.