MD15G1168500.v1.1
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Forward (+)
12952098 .. 12955462
3365 bp
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UTR
Exon/CDS
Intron
MD15G1168500.v1.1.491

Sequence Viewer

Length: 1290 bp
ATGGACAACCAGTGCGGTTGCTGGGCTGTCCTTAAACGCGGCGTTAGCGGTACCTGCAAATCCTCTGCTTCCAAAGACTCTGCCAACACTATCCCTCGTACTAGTCTTGTTTATGATGCAGCTACAGAGACCAGATATCTTAATGCCAGCAATAGAGACCTCTTGCCTCCAAATGAAGCCCAACTATCCTCTGATGCTCCTAATCCACCGCCTTCAGATGAGAAGCCGGTTCGCCAGTTGCTCCAGTTCACTTTTCAGGAGCTAAAATCAGCAACGGGGAACTTCAGGCCGGATAGCATTCTTGGGGAAGGCGGATTTGGATACGTGTTCAAAGGGTGGATAGAGGAAAATGGGACAGGGCCAGCGAAACCCGGGTCAGGGATTACAGTGGCAGTTAAAAGCTTAAAGCCAGATGGTCTCCAAGGCCATAGAGAATGGGTGGCTGAGGTTGACTTTCTCGGGCAGCTCCACCACTCTAATCTTGTAAAGCTTATCGGATACTGCATCGAAGATGATCAGAGGTTACTTGTTTACGAATTTATGACCCGCGGGAGTCTTGAAAATCATCTTTTCAGGAGGACTATACCTCTACCGTGGTCGAATAGGATTAAGATTGCACTTGGTGCAGCAAAAGGGTTGGCATTTCTCCACAACGGTCCAGAACCCGTCATTTATAGAGATTTTAAGACATCAAACATTTTGCTCGATTCAGAATACAATGCAAAGCTTTCAGATTTCGGTTTGGCGAAAGCCGGGCCTCAGGGAGACAAAACACATGTTTCTACTAGGGTTGTTGGAACATATGGCTATGCTGCTCCAGAGTATGTGATGACAGGACACTTGACATCTAAAAGTGATGTGTACAGCTTTGGTGTAGTTTTACTTGAGATTTTAACAGGAAGAAGATCCATGGATAAGAAACGCCCTAGCGGAGAACAAAACCTTGTGGCATGGGCTCGGCCACATTTAGCTGACAAGCGAAAGCTTTCCCTTCTAGTGGATCCACGCTTGGAATTGAACTACTCCATTAAAGGGGTCCAGAAGGTCTCACAATTGGCTTACAGTTGCCTTAGTAGGGACCCAAAATCCCGCCCTACAATGGATGAAGTCGTGAGGGTTCTTATTCCGTTGCAGGATCTCAATGACCTCGCCATCTTATCTCATCATTCTCGTTTATCTCAGCAAGGAAGGCGAAAGAAGAAACCTGACGGAACTCACCAGCTCACCTACAGCCAGTCTAAGAGCGTCAGAGATTCTCCGTTAAATACTGGCAAGCAGCAACGCAGATGA

Protein Analysis

430

Amino Acids

47.6

Weight (kDa)

9.44

Isoelectric Point (pI)

35.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 98 - 371 8.8e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 99 - 374 5.5e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 62
Acc65I GGTACC 1 cut(s) 50
AccB1I GGYRCC 1 cut(s) 50
AccII CGCG 2 cut(s) 39, 549
AciI CCGC 9 cut(s) 15, 39, 48, 209, 312, 547, 549, 930, 1090
AclWI GGATC 4 cut(s) 900, 995, 1008, 1143
AcoI YGGCCR 1 cut(s) 959
AcsI RAATTY 1 cut(s) 536
AcuI CTGAAG 2 cut(s) 198, 268
AdeI CACNNNGTG 1 cut(s) 623
AfaI GTAC 3 cut(s) 52, 100, 863
AfiI CCNNNNNNNGG 6 cut(s) 377, 378, 997, 1032, 1075, 1099
AflIII ACRYGT 2 cut(s) 324, 775
AgsI TTSAA 3 cut(s) 331, 560, 1018
AhlI ACTAGT 1 cut(s) 101
AjuI GAANNNNNNNTTGG 2 cut(s) 300, 332
Alw26I GTCTC 5 cut(s) 122, 150, 422, 759, 1051
AlwI GGATC 4 cut(s) 900, 995, 1008, 1143
Ama87I CYCGRG 2 cut(s) 371, 458
AoxI GGCC 5 cut(s) 287, 359, 424, 755, 959
ApeKI GCWGC 5 cut(s) 119, 463, 626, 812, 1276
ApoI RAATTY 1 cut(s) 536
ArsI GACNNNNNNTTYG 2 cut(s) 359, 391
Asp700I GAANNNNTTC 1 cut(s) 985
Asp718I GGTACC 1 cut(s) 50
AspS9I GGNCC 5 cut(s) 359, 656, 755, 1036, 1078
AsuC2I CCSGG 3 cut(s) 372, 373, 754
AsuHPI GGTGA 2 cut(s) 1208, 1216
AvaI CYCGRG 2 cut(s) 371, 458
AvaII GGWCC 3 cut(s) 656, 1036, 1078
AxyI CCTNAGG 1 cut(s) 759
BamHI GGATCC 1 cut(s) 1000
BanI GGYRCC 1 cut(s) 50
BanII GRGCYC 1 cut(s) 958
BbvCI CCTCAGC 1 cut(s) 444
BbvI GCAGC 4 cut(s) 131, 475, 638, 799
BccI CCATC 2 cut(s) 407, 1160
BciVI GTATCC 2 cut(s) 314, 491
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 3 cut(s) 372, 373, 754
BcoDI GTCTC 5 cut(s) 122, 150, 422, 759, 1051
BcuI ACTAGT 1 cut(s) 101
BfaI CTAG 4 cut(s) 102, 786, 927, 995
BfmI CTRYAG 2 cut(s) 123, 1228
BfuAI ACCTGC 1 cut(s) 62
BfuI GTATCC 2 cut(s) 314, 491
BisI GCNGC 6 cut(s) 40, 120, 464, 627, 813, 1277
BlsI GCNGC 6 cut(s) 41, 121, 465, 628, 814, 1278
Bme1390I CCNGG 3 cut(s) 372, 373, 754
Bme18I GGWCC 3 cut(s) 656, 1036, 1078
BmeT110I CYCGRG 2 cut(s) 371, 458
BmgT120I GGNCC 5 cut(s) 359, 656, 755, 1036, 1078
BmiI GGNNCC 5 cut(s) 52, 1002, 1037, 1079, 1080
BmrFI CCNGG 3 cut(s) 372, 373, 754
BmsI GCATC 3 cut(s) 106, 184, 513
BpmI CTGGAG 2 cut(s) 227, 801
Bpu10I CCTNAGC 1 cut(s) 444
BpuEI CTTGAG 1 cut(s) 905
BpuMI CCSGG 3 cut(s) 372, 373, 754
BsaAI YACGTR 1 cut(s) 325
BsaI GGTCTC 4 cut(s) 122, 150, 422, 1051
BsaJI CCNNGG 5 cut(s) 371, 421, 547, 593, 909
Bsc4I CCNNNNNNNGG 6 cut(s) 377, 378, 997, 1032, 1075, 1099
Bse118I RCCGGY 1 cut(s) 226
Bse1I ACTGG 5 cut(s) 10, 235, 244, 1234, 1273
Bse21I CCTNAGG 1 cut(s) 759
BseDI CCNNGG 5 cut(s) 371, 421, 547, 593, 909
BseGI GGATG 1 cut(s) 1108
BseLI CCNNNNNNNGG 6 cut(s) 377, 378, 997, 1032, 1075, 1099
BseMII CTCAG 3 cut(s) 435, 773, 1193
BseNI ACTGG 5 cut(s) 10, 235, 244, 1234, 1273
BseXI GCAGC 4 cut(s) 131, 475, 638, 799
BseYI CCCAGC 1 cut(s) 21
BsgI GTGCAG 1 cut(s) 645
Bsh1236I CGCG 2 cut(s) 39, 549
BshFI GGCC 5 cut(s) 289, 361, 426, 757, 961
BshNI GGYRCC 1 cut(s) 50
BsiHKCI CYCGRG 2 cut(s) 371, 458
BsiSI CCGG 4 cut(s) 227, 290, 372, 753
BslFI GGGAC 2 cut(s) 367, 1091
BslI CCNNNNNNNGG 6 cut(s) 377, 378, 997, 1032, 1075, 1099
BsmAI GTCTC 5 cut(s) 122, 150, 422, 759, 1051
BsmFI GGGAC 2 cut(s) 367, 1091
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 5 cut(s) 289, 361, 426, 757, 961
Bso31I GGTCTC 4 cut(s) 122, 150, 422, 1051
BsoBI CYCGRG 2 cut(s) 371, 458
Bsp1286I GDGCHC 1 cut(s) 958
Bsp1407I TGTACA 1 cut(s) 861
Bsp143I GATC 4 cut(s) 514, 905, 1000, 1135
Bsp19I CCATGG 1 cut(s) 909
BspACI CCGC 9 cut(s) 15, 39, 48, 209, 312, 547, 549, 930, 1090
BspANI GGCC 5 cut(s) 289, 361, 426, 757, 961
BspCNI CTCAG 3 cut(s) 436, 772, 1192
BspFNI CGCG 2 cut(s) 39, 549
BspLI GGNNCC 5 cut(s) 52, 1002, 1037, 1079, 1080
BspMI ACCTGC 1 cut(s) 62
BspPI GGATC 4 cut(s) 900, 995, 1008, 1143
BspT107I GGYRCC 1 cut(s) 50
BspTNI GGTCTC 4 cut(s) 122, 150, 422, 1051
BsrFI RCCGGY 1 cut(s) 226
BsrGI TGTACA 1 cut(s) 861
BsrI ACTGG 5 cut(s) 10, 235, 244, 1234, 1273
BssAI RCCGGY 1 cut(s) 226
BssECI CCNNGG 5 cut(s) 371, 421, 547, 593, 909
BssMI GATC 4 cut(s) 514, 905, 1000, 1135
BssT1I CCWWGG 2 cut(s) 421, 909
Bst4CI ACNGT 4 cut(s) 388, 594, 656, 1064
BstAPI GCANNNNNTGC 1 cut(s) 623
BstAUI TGTACA 1 cut(s) 861
BstBAI YACGTR 1 cut(s) 325
BstC8I GCNNGC 3 cut(s) 148, 363, 1274
BstDEI CTNAG 5 cut(s) 444, 759, 1070, 1179, 1239
BstDSI CCRYGG 3 cut(s) 547, 593, 909
BstF5I GGATG 1 cut(s) 1108
BstFNI CGCG 2 cut(s) 39, 549
BstKTI GATC 4 cut(s) 517, 908, 1003, 1138
BstMAI GTCTC 5 cut(s) 122, 150, 422, 759, 1051
BstMBI GATC 4 cut(s) 514, 905, 1000, 1135
BstMWI GCNNNNNNNGC 4 cut(s) 45, 54, 623, 1189
BstNSI RCATGY 1 cut(s) 779
BstSCI CCNGG 3 cut(s) 370, 371, 752
BstSFI CTRYAG 2 cut(s) 123, 1228
BstUI CGCG 2 cut(s) 39, 549
BstV1I GCAGC 4 cut(s) 131, 475, 638, 799
BstX2I RGATCY 3 cut(s) 905, 1000, 1135
BstYI RGATCY 3 cut(s) 905, 1000, 1135
Bsu36I CCTNAGG 1 cut(s) 759
BsuI GTATCC 2 cut(s) 314, 491
BsuRI GGCC 5 cut(s) 289, 361, 426, 757, 961
BtgI CCRYGG 3 cut(s) 547, 593, 909
BtsCI GGATG 1 cut(s) 1108
BtsIMutI CAGTG 2 cut(s) 17, 393
BveI ACCTGC 1 cut(s) 62
Cac8I GCNNGC 3 cut(s) 148, 363, 1274
Cfr10I RCCGGY 1 cut(s) 226
Cfr13I GGNCC 5 cut(s) 359, 656, 755, 1036, 1078
Cfr42I CCGCGG 1 cut(s) 550
Cfr9I CCCGGG 1 cut(s) 371
CseI GACGC 1 cut(s) 1234
Csp6I GTAC 3 cut(s) 51, 99, 862
CviAII CATG 3 cut(s) 776, 910, 951
CviQI GTAC 3 cut(s) 51, 99, 862
DdeI CTNAG 5 cut(s) 444, 759, 1070, 1179, 1239
DpnI GATC 4 cut(s) 516, 907, 1002, 1137
DpnII GATC 4 cut(s) 514, 905, 1000, 1135
DraIII CACNNNGTG 1 cut(s) 623
EaeI YGGCCR 1 cut(s) 959
EciI GGCGGA 1 cut(s) 327
Eco130I CCWWGG 2 cut(s) 421, 909
Eco24I GRGCYC 1 cut(s) 958
Eco31I GGTCTC 4 cut(s) 122, 150, 422, 1051
Eco32I GATATC 1 cut(s) 137
Eco47I GGWCC 3 cut(s) 656, 1036, 1078
Eco57I CTGAAG 2 cut(s) 198, 268
Eco81I CCTNAGG 1 cut(s) 759
Eco88I CYCGRG 2 cut(s) 371, 458
EcoO109I RGGNCCY 1 cut(s) 1078
EcoRV GATATC 1 cut(s) 137
EcoT14I CCWWGG 2 cut(s) 421, 909
EcoT38I GRGCYC 1 cut(s) 958
ErhI CCWWGG 2 cut(s) 421, 909
FaeI CATG 3 cut(s) 779, 913, 954
FaqI GGGAC 2 cut(s) 367, 1091
FatI CATG 3 cut(s) 775, 909, 950
FauI CCCGC 3 cut(s) 542, 554, 1097
FauNDI CATATG 1 cut(s) 802
FbaI TGATCA 1 cut(s) 514
Fnu4HI GCNGC 6 cut(s) 40, 120, 464, 627, 813, 1277
FokI GGATG 1 cut(s) 1115
FriOI GRGCYC 1 cut(s) 958
Fsp4HI GCNGC 6 cut(s) 40, 120, 464, 627, 813, 1277
FspBI CTAG 4 cut(s) 102, 786, 927, 995
GluI GCNGC 6 cut(s) 40, 120, 464, 627, 813, 1277
GsaI CCCAGC 1 cut(s) 25
GsuI CTGGAG 2 cut(s) 227, 801
HaeIII GGCC 5 cut(s) 289, 361, 426, 757, 961
HapII CCGG 4 cut(s) 227, 290, 372, 753
HgaI GACGC 1 cut(s) 1234
Hin1II CATG 3 cut(s) 779, 913, 954
HincII GTYRAC 1 cut(s) 451
HindII GTYRAC 1 cut(s) 451
HindIII AAGCTT 4 cut(s) 400, 488, 725, 983
HinfI GANTC 4 cut(s) 77, 553, 707, 1253
HpaII CCGG 4 cut(s) 227, 290, 372, 753
HphI GGTGA 2 cut(s) 1208, 1216
Hpy166II GTNNAC 4 cut(s) 249, 451, 532, 862
Hpy188I TCNGA 7 cut(s) 193, 217, 497, 519, 712, 733, 1250
Hpy188III TCNNGA 7 cut(s) 257, 557, 574, 659, 818, 1039, 1111
Hpy8I GTNNAC 4 cut(s) 249, 451, 532, 862
HpyAV CCTTC 5 cut(s) 222, 302, 1001, 1036, 1182
HpyCH4III ACNGT 4 cut(s) 388, 594, 656, 1064
HpyCH4IV ACGT 1 cut(s) 324
HpyCH4V TGCA 7 cut(s) 57, 119, 504, 617, 626, 722, 1132
HpyF10VI GCNNNNNNNGC 4 cut(s) 45, 54, 623, 1189
HpyF3I CTNAG 5 cut(s) 444, 759, 1070, 1179, 1239
HpySE526I ACGT 1 cut(s) 324
Hsp92II CATG 3 cut(s) 779, 913, 954
KflI GGGWCCC 1 cut(s) 1078
KpnI GGTACC 1 cut(s) 54
Ksp22I TGATCA 1 cut(s) 514
KspI CCGCGG 1 cut(s) 550
Kzo9I GATC 4 cut(s) 514, 905, 1000, 1135
LmnI GCTCC 5 cut(s) 202, 246, 259, 471, 820
Lsp1109I GCAGC 4 cut(s) 131, 475, 638, 799
LweI GCATC 3 cut(s) 106, 184, 513
MaeI CTAG 4 cut(s) 102, 786, 927, 995
MaeII ACGT 1 cut(s) 324
MaeIII GTNAC 1 cut(s) 522
MalI GATC 4 cut(s) 516, 907, 1002, 1137
MboI GATC 4 cut(s) 514, 905, 1000, 1135
MboII GAAGA 4 cut(s) 521, 912, 915, 1210
MfeI CAATTG 1 cut(s) 1052
MflI RGATCY 3 cut(s) 905, 1000, 1135
MhlI GDGCHC 1 cut(s) 958
MluCI AATT 3 cut(s) 536, 1013, 1052
MlyI GAGTC 2 cut(s) 71, 562
MmeI TCCRAC 1 cut(s) 775
MroXI GAANNNNTTC 1 cut(s) 985
MseI TTAA 9 cut(s) 33, 141, 396, 404, 609, 684, 893, 1029, 1262
MspA1I CMGCKG 1 cut(s) 549
MspI CCGG 4 cut(s) 227, 290, 372, 753
MspR9I CCNGG 3 cut(s) 372, 373, 754
MunI CAATTG 1 cut(s) 1052
Mva1269I GAATGC 1 cut(s) 297
MvnI CGCG 2 cut(s) 39, 549
MwoI GCNNNNNNNGC 4 cut(s) 45, 54, 623, 1189
NciI CCSGG 3 cut(s) 372, 373, 754
NcoI CCATGG 1 cut(s) 909
NdeI CATATG 1 cut(s) 802
NdeII GATC 4 cut(s) 514, 905, 1000, 1135
NlaIII CATG 3 cut(s) 779, 913, 954
NlaIV GGNNCC 5 cut(s) 52, 1002, 1037, 1079, 1080
NmeAIII GCCGAG 1 cut(s) 937
NspI RCATGY 1 cut(s) 779
PciI ACATGT 1 cut(s) 775
PctI GAATGC 1 cut(s) 297
PdmI GAANNNNTTC 1 cut(s) 985
PfeI GAWTC 2 cut(s) 707, 1253
PkrI GCNGC 6 cut(s) 41, 121, 465, 628, 814, 1278
PleI GAGTC 2 cut(s) 71, 561
PpsI GAGTC 2 cut(s) 71, 561
Ppu21I YACGTR 1 cut(s) 325
PpuMI RGGWCCY 1 cut(s) 1078
PscI ACATGT 1 cut(s) 775
Psp5II RGGWCCY 1 cut(s) 1078
PspFI CCCAGC 1 cut(s) 21
PspN4I GGNNCC 5 cut(s) 52, 1002, 1037, 1079, 1080
PspPI GGNCC 5 cut(s) 359, 656, 755, 1036, 1078
PspPPI RGGWCCY 1 cut(s) 1078
PsuI RGATCY 3 cut(s) 905, 1000, 1135
RsaI GTAC 3 cut(s) 52, 100, 863
RsaNI GTAC 3 cut(s) 51, 99, 862
SacII CCGCGG 1 cut(s) 550
SaqAI TTAA 9 cut(s) 33, 141, 396, 404, 609, 684, 893, 1029, 1262
SatI GCNGC 6 cut(s) 40, 120, 464, 627, 813, 1277
Sau3AI GATC 4 cut(s) 514, 905, 1000, 1135
Sau96I GGNCC 5 cut(s) 359, 656, 755, 1036, 1078
SchI GAGTC 2 cut(s) 71, 562
ScrFI CCNGG 3 cut(s) 372, 373, 754
SduI GDGCHC 1 cut(s) 958
SfaNI GCATC 3 cut(s) 106, 184, 513
SfcI CTRYAG 2 cut(s) 123, 1228
Sfr303I CCGCGG 1 cut(s) 550
SgrBI CCGCGG 1 cut(s) 550
SinI GGWCC 3 cut(s) 656, 1036, 1078
SmaI CCCGGG 1 cut(s) 373
SmlI CTYRAG 1 cut(s) 884
SmoI CTYRAG 1 cut(s) 884
SpeI ACTAGT 1 cut(s) 101
Sse9I AATT 3 cut(s) 536, 1013, 1052
SsiI CCGC 9 cut(s) 15, 39, 48, 209, 312, 547, 549, 930, 1090
SspMI CTAG 4 cut(s) 102, 786, 927, 995
StyD4I CCNGG 3 cut(s) 370, 371, 752
StyI CCWWGG 2 cut(s) 421, 909
TaaI ACNGT 4 cut(s) 388, 594, 656, 1064
TaiI ACGT 1 cut(s) 327
TaqI TCGA 3 cut(s) 507, 599, 705
TasI AATT 3 cut(s) 536, 1013, 1052
TatI WGTACW 1 cut(s) 861
TauI GCSGC 1 cut(s) 42
TfiI GAWTC 2 cut(s) 707, 1253
Tru1I TTAA 9 cut(s) 33, 141, 396, 404, 609, 684, 893, 1029, 1262
Tru9I TTAA 9 cut(s) 33, 141, 396, 404, 609, 684, 893, 1029, 1262
TscAI CASTG 2 cut(s) 17, 393
TseI GCWGC 5 cut(s) 119, 463, 626, 812, 1276
TspDTI ATGAA 2 cut(s) 189, 1119
TspGWI ACGGA 3 cut(s) 1116, 1224, 1248
TspMI CCCGGG 1 cut(s) 371
TspRI CASTG 2 cut(s) 17, 393
VpaK11BI GGWCC 3 cut(s) 656, 1036, 1078
XapI RAATTY 1 cut(s) 536
XceI RCATGY 1 cut(s) 779
XmaI CCCGGG 1 cut(s) 371
XmnI GAANNNNTTC 1 cut(s) 985
XspI CTAG 4 cut(s) 102, 786, 927, 995
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.