FvH4_1g02650
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
1492521 .. 1496354
3834 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g02650.t1

Sequence Viewer

Length: 1299 bp
ATGGAGAAGAAGTGTGGGTGTTGGGCTGTTCTCAGACGCGGTGTTAGTGGTTCCTGCAAGTCCTCTGCTTCTAAAGATTCTGCTAACTCTATTCCTCGTACCAGTCTTGTGTATGATGCAGCAACTGAAACCAGGTATCTAAATGCTAGTAATAGAGACCTCTTGCCCCCTAATGAAGCACAACTATCCTCAGATACTCCCAATCCACCACCATCAGATGAGAAGCCTACTCGCCAGTTGCTCCAATTCAGTTTTCAGGAGCTGAAATCTGCAACCGGGAACTTCAGACCTGATAGCATTCTTGGGGAAGGTGGATTTGGATTCGTCTTCAAAGGATGGATAGAGGAAAATGGAACAGCACCAGCAAAGCCTGGGTCAGGGATTACAGTAGCAGTTAAAAGCTTAAAGCCAGATGGTCTCCAAGGCCATAGAGAATGGGTGGCTGAGGTCGACTTTCTAGGACAGCTCCACCATCCAAATCTTGTAAAGCTTATTGGGTACTGCATTGAAGATGATCAACGGTTGCTTGTTTATGAGTTTATGACTCGTGGGAGTCTTGAAAATCATCTCTTCAGAAGGACTATACCTCTGCCATGGTCCAATAGGATTAAGATTGCACTTGGTGCAGCAAAAGGGTTGGCCTTTCTCCATAATGGTCAAGAACCAGTCATTTATAGAGATTTTAAGACATCCAACATCCTGCTTGATTCGGAATACACTGCAAAGCTTTCAGATTTTGGTTTGGCTAAAGCTGGGCCGCAAGGAGACAAAACGCATGTTTCTACCAGGGTAGTTGGAACATATGGCTATGCCGCCCCAGAGTATGTAATGACTGGACACTTGACCTCTAAAAGCGATGTTTACAGCTTCGGCGTAGTTTTACTTGAAATTTTAACAGGAAGAAGATCGATGGACAAGAAACGCCCAAGTGGGGAACAAAACCTTGTCTCTTGGGCTAGGCCATATTTAACTGACAAGCGAAAGCTTTTTCTTCTTGTGGATCCTCGCTTGGAATTGAATTACTCCATCAAGGGGGTACACAAAGTCTCACAGTTGGCTTATGACTGCCTTCATAGGGACCCCAAATCTCGGCCTACAATGGATGAAGTAGTGAGGGTTCTTACTCCATTGCAAGATCTCAATGACCTTGCTATCATGTCTCACCATGCTCGTTTATCTCAACAAGCAAGACGCAAGAAGAAACCCGATCATCATGGAAGTCAACAGCAGCTGGCCTTCACCCACTCTAAGAGCATCAGAGCTTCTCCATTGAATACTGGAAAGCAGCAACGTCGATGA

Protein Analysis

433

Amino Acids

48.22

Weight (kDa)

9.54

Isoelectric Point (pI)

37.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 98 - 371 3.6e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 99 - 374 1.3e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 450
AccII CGCG 1 cut(s) 39
AciI CCGC 3 cut(s) 39, 758, 813
AclWI GGATC 2 cut(s) 995, 1008
AcsI RAATTY 1 cut(s) 888
AcuI CTGAAG 2 cut(s) 268, 556
AdeI CACNNNGTG 1 cut(s) 623
AfaI GTAC 3 cut(s) 100, 500, 1038
AfiI CCNNNNNNNGG 5 cut(s) 377, 931, 1032, 1075, 1089
AgsI TTSAA 6 cut(s) 331, 509, 560, 887, 1018, 1273
AjnI CCWGG 3 cut(s) 131, 370, 785
AjuI GAANNNNNNNTTGG 4 cut(s) 237, 269, 300, 332
Alw26I GTCTC 6 cut(s) 150, 422, 759, 952, 1051, 1164
AlwI GGATC 2 cut(s) 995, 1008
AlwNI CAGNNNCTG 3 cut(s) 125, 262, 1231
AoxI GGCC 6 cut(s) 424, 639, 755, 959, 1091, 1233
ApeKI GCWGC 4 cut(s) 119, 626, 1228, 1285
ApoI RAATTY 1 cut(s) 888
ArsI GACNNNNNNTTYG 2 cut(s) 359, 391
AspS9I GGNCC 3 cut(s) 597, 755, 1078
AsuC2I CCSGG 1 cut(s) 277
AsuHPI GGTGA 2 cut(s) 1154, 1231
AvaII GGWCC 2 cut(s) 597, 1078
BamHI GGATCC 1 cut(s) 1000
BauI CACGAG 1 cut(s) 546
BbsI GAAGAC 1 cut(s) 319
BbvCI CCTCAGC 1 cut(s) 444
BbvI GCAGC 3 cut(s) 131, 638, 1240
BccI CCATC 6 cut(s) 220, 330, 407, 480, 904, 1034
BcgI CGANNNNNNTGC 1 cut(s) 1274
BciT130I CCWGG 3 cut(s) 133, 372, 787
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 1 cut(s) 277
BcoDI GTCTC 6 cut(s) 150, 422, 759, 952, 1051, 1164
BfaI CTAG 3 cut(s) 147, 458, 957
BglII AGATCT 1 cut(s) 1135
BisI GCNGC 6 cut(s) 120, 627, 758, 813, 1229, 1286
BlsI GCNGC 6 cut(s) 121, 628, 759, 814, 1230, 1287
Bme1390I CCNGG 4 cut(s) 133, 277, 372, 787
Bme18I GGWCC 2 cut(s) 597, 1078
BmgT120I GGNCC 3 cut(s) 597, 755, 1078
BmiI GGNNCC 4 cut(s) 52, 1002, 1079, 1080
BmrFI CCNGG 4 cut(s) 133, 277, 372, 787
BmsI GCATC 2 cut(s) 106, 1263
BpiI GAAGAC 1 cut(s) 319
Bpu10I CCTNAGC 1 cut(s) 444
BpuMI CCSGG 1 cut(s) 277
Bsa29I ATCGAT 1 cut(s) 908
BsaI GGTCTC 2 cut(s) 150, 422
BsaJI CCNNGG 4 cut(s) 371, 421, 593, 786
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 5 cut(s) 377, 931, 1032, 1075, 1089
Bse1I ACTGG 5 cut(s) 102, 235, 665, 838, 1282
Bse3DI GCAATG 1 cut(s) 1127
BseBI CCWGG 3 cut(s) 133, 372, 787
BseCI ATCGAT 1 cut(s) 908
BseDI CCNNGG 4 cut(s) 371, 421, 593, 786
BseGI GGATG 5 cut(s) 341, 472, 689, 696, 1108
BseLI CCNNNNNNNGG 5 cut(s) 377, 931, 1032, 1075, 1089
BseMI GCAATG 1 cut(s) 1127
BseMII CTCAG 3 cut(s) 46, 204, 435
BseNI ACTGG 5 cut(s) 102, 235, 665, 838, 1282
BseXI GCAGC 3 cut(s) 131, 638, 1240
BseYI CCCAGC 1 cut(s) 752
BsgI GTGCAG 1 cut(s) 645
Bsh1236I CGCG 1 cut(s) 39
BshFI GGCC 6 cut(s) 426, 641, 757, 961, 1093, 1235
BshVI ATCGAT 1 cut(s) 908
BsiSI CCGG 1 cut(s) 276
BslFI GGGAC 1 cut(s) 1091
BslI CCNNNNNNNGG 5 cut(s) 377, 931, 1032, 1075, 1089
BsmAI GTCTC 6 cut(s) 150, 422, 759, 952, 1051, 1164
BsmFI GGGAC 1 cut(s) 1091
BsmI GAATGC 1 cut(s) 297
BsnI GGCC 6 cut(s) 426, 641, 757, 961, 1093, 1235
Bso31I GGTCTC 2 cut(s) 150, 422
Bsp143I GATC 5 cut(s) 514, 905, 1000, 1135, 1207
Bsp19I CCATGG 1 cut(s) 593
BspACI CCGC 3 cut(s) 39, 758, 813
BspANI GGCC 6 cut(s) 426, 641, 757, 961, 1093, 1235
BspCNI CTCAG 3 cut(s) 45, 203, 436
BspDI ATCGAT 1 cut(s) 908
BspFNI CGCG 1 cut(s) 39
BspLI GGNNCC 4 cut(s) 52, 1002, 1079, 1080
BspPI GGATC 2 cut(s) 995, 1008
BspTNI GGTCTC 2 cut(s) 150, 422
BsrDI GCAATG 1 cut(s) 1127
BsrI ACTGG 5 cut(s) 102, 235, 665, 838, 1282
BssECI CCNNGG 4 cut(s) 371, 421, 593, 786
BssMI GATC 5 cut(s) 514, 905, 1000, 1135, 1207
BssSI CACGAG 1 cut(s) 546
BssT1I CCWWGG 2 cut(s) 421, 593
Bst2BI CACGAG 1 cut(s) 546
Bst2UI CCWGG 3 cut(s) 133, 372, 787
Bst4CI ACNGT 3 cut(s) 388, 522, 1053
Bst6I CTCTTC 1 cut(s) 575
BstAPI GCANNNNNTGC 1 cut(s) 623
BstC8I GCNNGC 1 cut(s) 1233
BstDEI CTNAG 4 cut(s) 32, 190, 444, 1248
BstDSI CCRYGG 1 cut(s) 593
BstENI CCTNNNNNAGG 1 cut(s) 375
BstF5I GGATG 5 cut(s) 341, 472, 689, 696, 1108
BstFNI CGCG 1 cut(s) 39
BstKTI GATC 5 cut(s) 517, 908, 1003, 1138, 1210
BstMAI GTCTC 6 cut(s) 150, 422, 759, 952, 1051, 1164
BstMBI GATC 5 cut(s) 514, 905, 1000, 1135, 1207
BstMWI GCNNNNNNNGC 1 cut(s) 623
BstNI CCWGG 3 cut(s) 133, 372, 787
BstNSI RCATGY 1 cut(s) 779
BstSCI CCNGG 4 cut(s) 131, 275, 370, 785
BstUI CGCG 1 cut(s) 39
BstV1I GCAGC 3 cut(s) 131, 638, 1240
BstV2I GAAGAC 1 cut(s) 319
BstX2I RGATCY 2 cut(s) 1000, 1135
BstYI RGATCY 2 cut(s) 1000, 1135
Bsu15I ATCGAT 1 cut(s) 908
BsuRI GGCC 6 cut(s) 426, 641, 757, 961, 1093, 1235
BsuTUI ATCGAT 1 cut(s) 908
BtgI CCRYGG 1 cut(s) 593
BtgZI GCGATG 1 cut(s) 870
BtsCI GGATG 5 cut(s) 341, 472, 689, 696, 1108
BtsI GCAGTG 1 cut(s) 717
BtsIMutI CAGTG 1 cut(s) 717
Cac8I GCNNGC 1 cut(s) 1233
CaiI CAGNNNCTG 3 cut(s) 125, 262, 1231
Cfr13I GGNCC 3 cut(s) 597, 755, 1078
ClaI ATCGAT 1 cut(s) 908
CseI GACGC 2 cut(s) 45, 1200
CsiI ACCWGGT 1 cut(s) 131
Csp6I GTAC 3 cut(s) 99, 499, 1037
CviAII CATG 5 cut(s) 594, 776, 1156, 1166, 1214
CviQI GTAC 3 cut(s) 99, 499, 1037
DdeI CTNAG 4 cut(s) 32, 190, 444, 1248
DpnI GATC 5 cut(s) 516, 907, 1002, 1137, 1209
DpnII GATC 5 cut(s) 514, 905, 1000, 1135, 1207
DraIII CACNNNGTG 1 cut(s) 623
Eam1104I CTCTTC 1 cut(s) 575
EarI CTCTTC 1 cut(s) 575
Eco130I CCWWGG 2 cut(s) 421, 593
Eco31I GGTCTC 2 cut(s) 150, 422
Eco47I GGWCC 2 cut(s) 597, 1078
Eco57I CTGAAG 2 cut(s) 268, 556
EcoNI CCTNNNNNAGG 1 cut(s) 375
EcoO109I RGGNCCY 1 cut(s) 1078
EcoRII CCWGG 3 cut(s) 131, 370, 785
EcoT14I CCWWGG 2 cut(s) 421, 593
ErhI CCWWGG 2 cut(s) 421, 593
FaeI CATG 5 cut(s) 597, 779, 1159, 1169, 1217
FaqI GGGAC 1 cut(s) 1091
FatI CATG 5 cut(s) 593, 775, 1155, 1165, 1213
FauNDI CATATG 1 cut(s) 802
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 1 cut(s) 450
Fnu4HI GCNGC 6 cut(s) 120, 627, 758, 813, 1229, 1286
FokI GGATG 5 cut(s) 348, 459, 676, 683, 1115
Fsp4HI GCNGC 6 cut(s) 120, 627, 758, 813, 1229, 1286
FspBI CTAG 3 cut(s) 147, 458, 957
GluI GCNGC 6 cut(s) 120, 627, 758, 813, 1229, 1286
GsaI CCCAGC 1 cut(s) 756
HaeIII GGCC 6 cut(s) 426, 641, 757, 961, 1093, 1235
HapII CCGG 1 cut(s) 276
HgaI GACGC 2 cut(s) 45, 1200
Hin1II CATG 5 cut(s) 597, 779, 1159, 1169, 1217
HincII GTYRAC 2 cut(s) 451, 1223
HindII GTYRAC 2 cut(s) 451, 1223
HindIII AAGCTT 4 cut(s) 400, 488, 725, 983
HinfI GANTC 5 cut(s) 77, 321, 544, 553, 707
HpaII CCGG 1 cut(s) 276
HphI GGTGA 2 cut(s) 1154, 1231
Hpy166II GTNNAC 4 cut(s) 451, 862, 1039, 1223
Hpy188I TCNGA 8 cut(s) 35, 193, 217, 287, 575, 712, 733, 1259
Hpy188III TCNNGA 3 cut(s) 257, 557, 659
Hpy8I GTNNAC 4 cut(s) 451, 862, 1039, 1223
Hpy99I CGWCG 1 cut(s) 1296
HpyAV CCTTC 4 cut(s) 302, 570, 1079, 1246
HpyCH4III ACNGT 3 cut(s) 388, 522, 1053
HpyCH4IV ACGT 1 cut(s) 1291
HpyCH4V TGCA 8 cut(s) 57, 119, 272, 504, 617, 626, 722, 1132
HpyF10VI GCNNNNNNNGC 1 cut(s) 623
HpyF3I CTNAG 4 cut(s) 32, 190, 444, 1248
HpySE526I ACGT 1 cut(s) 1291
Hsp92II CATG 5 cut(s) 597, 779, 1159, 1169, 1217
KflI GGGWCCC 1 cut(s) 1078
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 5 cut(s) 514, 905, 1000, 1135, 1207
LmnI GCTCC 3 cut(s) 246, 259, 471
Lsp1109I GCAGC 3 cut(s) 131, 638, 1240
LweI GCATC 2 cut(s) 106, 1263
MabI ACCWGGT 1 cut(s) 131
MaeI CTAG 3 cut(s) 147, 458, 957
MaeII ACGT 1 cut(s) 1291
MalI GATC 5 cut(s) 516, 907, 1002, 1137, 1209
MboI GATC 5 cut(s) 514, 905, 1000, 1135, 1207
MboII GAAGA 8 cut(s) 19, 319, 521, 562, 912, 915, 983, 1210
MflI RGATCY 2 cut(s) 1000, 1135
MluCI AATT 4 cut(s) 245, 888, 1013, 1018
MlyI GAGTC 2 cut(s) 538, 562
MmeI TCCRAC 2 cut(s) 717, 775
MseI TTAA 6 cut(s) 396, 404, 609, 684, 893, 968
MspA1I CMGCKG 1 cut(s) 1231
MspI CCGG 1 cut(s) 276
MspR9I CCNGG 4 cut(s) 133, 277, 372, 787
Mva1269I GAATGC 1 cut(s) 297
MvaI CCWGG 3 cut(s) 133, 372, 787
MvnI CGCG 1 cut(s) 39
MwoI GCNNNNNNNGC 1 cut(s) 623
NciI CCSGG 1 cut(s) 277
NcoI CCATGG 1 cut(s) 593
NdeI CATATG 1 cut(s) 802
NdeII GATC 5 cut(s) 514, 905, 1000, 1135, 1207
NlaIII CATG 5 cut(s) 597, 779, 1159, 1169, 1217
NlaIV GGNNCC 4 cut(s) 52, 1002, 1079, 1080
NmeAIII GCCGAG 1 cut(s) 1069
NspI RCATGY 1 cut(s) 779
PctI GAATGC 1 cut(s) 297
PfeI GAWTC 3 cut(s) 77, 321, 707
PkrI GCNGC 6 cut(s) 121, 628, 759, 814, 1230, 1287
PleI GAGTC 2 cut(s) 538, 561
PpsI GAGTC 2 cut(s) 538, 561
PpuMI RGGWCCY 1 cut(s) 1078
Psp5II RGGWCCY 1 cut(s) 1078
Psp6I CCWGG 3 cut(s) 131, 370, 785
PspFI CCCAGC 1 cut(s) 752
PspGI CCWGG 3 cut(s) 131, 370, 785
PspN4I GGNNCC 4 cut(s) 52, 1002, 1079, 1080
PspPI GGNCC 3 cut(s) 597, 755, 1078
PspPPI RGGWCCY 1 cut(s) 1078
PsrI GAACNNNNNNTAC 2 cut(s) 1101, 1133
PstNI CAGNNNCTG 3 cut(s) 125, 262, 1231
PsuI RGATCY 2 cut(s) 1000, 1135
PvuII CAGCTG 1 cut(s) 1231
RsaI GTAC 3 cut(s) 100, 500, 1038
RsaNI GTAC 3 cut(s) 99, 499, 1037
SalI GTCGAC 1 cut(s) 449
SaqAI TTAA 6 cut(s) 396, 404, 609, 684, 893, 968
SatI GCNGC 6 cut(s) 120, 627, 758, 813, 1229, 1286
Sau3AI GATC 5 cut(s) 514, 905, 1000, 1135, 1207
Sau96I GGNCC 3 cut(s) 597, 755, 1078
SchI GAGTC 2 cut(s) 538, 562
ScrFI CCNGG 4 cut(s) 133, 277, 372, 787
SexAI ACCWGGT 1 cut(s) 131
SfaNI GCATC 2 cut(s) 106, 1263
SinI GGWCC 2 cut(s) 597, 1078
Sse9I AATT 4 cut(s) 245, 888, 1013, 1018
SsiI CCGC 3 cut(s) 39, 758, 813
SspMI CTAG 3 cut(s) 147, 458, 957
StyD4I CCNGG 4 cut(s) 131, 275, 370, 785
StyI CCWWGG 2 cut(s) 421, 593
TaaI ACNGT 3 cut(s) 388, 522, 1053
TaiI ACGT 1 cut(s) 1294
TaqI TCGA 3 cut(s) 450, 908, 1294
TasI AATT 4 cut(s) 245, 888, 1013, 1018
TauI GCSGC 2 cut(s) 760, 815
TfiI GAWTC 3 cut(s) 77, 321, 707
Tru1I TTAA 6 cut(s) 396, 404, 609, 684, 893, 968
Tru9I TTAA 6 cut(s) 396, 404, 609, 684, 893, 968
TscAI CASTG 1 cut(s) 724
TseI GCWGC 4 cut(s) 119, 626, 1228, 1285
TspDTI ATGAA 3 cut(s) 189, 1061, 1119
TspRI CASTG 1 cut(s) 724
VpaK11BI GGWCC 2 cut(s) 597, 1078
XagI CCTNNNNNAGG 1 cut(s) 375
XapI RAATTY 1 cut(s) 888
XceI RCATGY 1 cut(s) 779
XmiI GTMKAC 1 cut(s) 450
XspI CTAG 3 cut(s) 147, 458, 957
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.