Prupe.3G272000_v2.0.a1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0000641
Physical Location & Seq
Reverse (-)
25246129 .. 25249964
3836 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G272000.1

Sequence Viewer

Length: 1428 bp
ATGGGTTTGGTCCTTAATGATAGCAAGGTGAAGACTTGGGATGGGAGCAAATCAAAGGGAAAGAAGAAGAAAGATGAGGCAGTGGAGGAAACTGGATGTTGGGTTAAGTTCAGTTTTGGGACTTGCATGCCTTCAAGATCCAAAGTTGATAGCGCCATGACTGGAACTACTATTTCTTTTGCGGAAACTAAATCTTCGAATGAGAAAAGTAGAGACCGAGAACTTACTCGTGGAGGATCCTCTACAACTACTAGTAATGGTGGAAGTACTTCATCCACACCCTATTTCAGTGAGGAACTGAAGGTTGCTTCTCAGCTCCGAAAATTCACATTTAATGAACTTAAGCAAGCCACTAGAAACTTCAGACCTGAGAGTCTTCTTGGTGAGGGTGGATTTGGCTGTGTGTTCAAAGGTTGGGTCGAGGAAAATGGAACTGCTCCTGTGAAACCCGGTACTGGGCTTACGGTTGCAGTTAAGACTCTCAACCATGATGGACTTCAGGGTCACAAAGAATGGCTTGCTGAAATTTATTTTCTTGGTGATCTCATCCATCCTAATTTGGTAAAGTTAATTGGTTACTCCATCGAAGATGACCAAAGGTTGTTGGTTTACGAGTTTCTGCCAAGGGGAAGTTTGGAAAACCACCTCTTCAGAAGATCCCTGCCTCTTCCATGGTCTATTAGAATGAAAATTGCACTCGGTGCTGCAAAGGGTCTGGCCTTTCTTCATGAAGAAGTTCAAAGACCAGTCATATACCGTGACTTTAAAACATCTAATATTCTTTTAGATGCGGATTACAATGCCAAGCTTTCGGATTTTGGACTTGCGAAAGATGGTCCTGAGGGTGATAAAACTCATGTGTCCACACGAGTTATGGGAACCTATGGTTATGCAGCCCCAGAGTATGTGATGACTGGACATCTGACATCGAAGAGTGATGTCTATAGTTTTGGAGTTGTCCTACTCGAAATGCTAAATGGCAGAAGATCCATGGATAAAAATAGACCCAATGGGGAGCACAATCTTGTGGAATGGGCGAGACAACTTTTTGGAGACAAGAGGAGGTTATTCCAGTTAATTGACCCCCGGCTTGAAGGTCATTTTTCGATCAAAGGTGCACAAAAAGCTATCCAGCTGGCCGCCCACTGCCTCAGCCGTGACCCAAAAGCTAGACCAATGATGAGTGAAGTTGTTGAAGCCCTAAAGCCTCTACCAAACCTCAAGGATATGGCCAGTTCTTCCTATCACTTCCAAACCATGCAAGCAGCTCGTTCCAGGTCCACCTCAAATGCTAAGAATGGCATTAGAACGCAGGCAGTATTTGTACCAAGGAACGGACACCCCATAAGGAGCTTGTCAAGTCCAAATGGTCCTCCTGCTTCCCCATATTATCCTCACAAATCACCTAAACCTAACTCCAAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

476

Amino Acids

52.74

Weight (kDa)

9.53

Isoelectric Point (pI)

36.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 372, 501
AciI CCGC 3 cut(s) 182, 791, 1140
AclWI GGATC 5 cut(s) 132, 231, 244, 651, 981
AcoI YGGCCR 2 cut(s) 1137, 1230
AcsI RAATTY 2 cut(s) 323, 525
AcuI CTGAAG 4 cut(s) 320, 346, 482, 634
AdeI CACNNNGTG 1 cut(s) 701
AfaI GTAC 3 cut(s) 268, 454, 1326
AfiI CCNNNNNNNGG 3 cut(s) 455, 456, 1334
AflII CTTAAG 1 cut(s) 341
AgsI TTSAA 5 cut(s) 135, 409, 740, 1094, 1196
AhlI ACTAGT 1 cut(s) 251
AjnI CCWGG 1 cut(s) 1274
AluBI AGCT 7 cut(s) 316, 808, 1127, 1135, 1169, 1268, 1353
AluI AGCT 7 cut(s) 316, 808, 1127, 1135, 1169, 1268, 1353
Alw21I GWGCWC 2 cut(s) 1020, 1120
Alw26I GTCTC 3 cut(s) 207, 1033, 1047
Alw44I GTGCAC 1 cut(s) 1116
AlwI GGATC 5 cut(s) 132, 231, 244, 651, 981
AoxI GGCC 3 cut(s) 717, 1137, 1230
ApaLI GTGCAC 1 cut(s) 1116
ApeKI GCWGC 3 cut(s) 704, 893, 1265
ApoI RAATTY 2 cut(s) 323, 525
ArsI GACNNNNNNTTYG 2 cut(s) 402, 434
Asp700I GAANNNNTTC 2 cut(s) 268, 735
AspLEI GCGC 1 cut(s) 155
AspS9I GGNCC 4 cut(s) 10, 836, 1278, 1370
AsuC2I CCSGG 2 cut(s) 450, 1087
AsuHPI GGTGA 5 cut(s) 40, 395, 551, 857, 1395
AsuII TTCGAA 1 cut(s) 197
AvaII GGWCC 4 cut(s) 10, 836, 1278, 1370
AxyI CCTNAGG 1 cut(s) 840
BaeGI GKGCMC 1 cut(s) 1120
BalI TGGCCA 1 cut(s) 1232
BamHI GGATCC 1 cut(s) 236
BauI CACGAG 2 cut(s) 228, 867
BbsI GAAGAC 2 cut(s) 38, 368
Bbv12I GWGCWC 2 cut(s) 1020, 1120
BbvCI CCTCAGC 1 cut(s) 1151
BbvI GCAGC 3 cut(s) 691, 905, 1277
BccI CCATC 5 cut(s) 35, 485, 558, 590, 827
BceAI ACGGC 1 cut(s) 1140
BcgI CGANNNNNNTGC 2 cut(s) 1250, 1284
BciT130I CCWGG 1 cut(s) 1276
BcnI CCSGG 2 cut(s) 450, 1087
BcoDI GTCTC 3 cut(s) 207, 1033, 1047
BcuI ACTAGT 1 cut(s) 251
BfaI CTAG 3 cut(s) 252, 354, 1170
BfmI CTRYAG 1 cut(s) 943
BfoI RGCGCY 1 cut(s) 156
BfrI CTTAAG 1 cut(s) 341
BisI GCNGC 4 cut(s) 705, 894, 1140, 1266
BlsI GCNGC 4 cut(s) 706, 895, 1141, 1267
BmcAI AGTACT 1 cut(s) 268
Bme1390I CCNGG 3 cut(s) 450, 1087, 1276
Bme18I GGWCC 4 cut(s) 10, 836, 1278, 1370
BmgT120I GGNCC 4 cut(s) 10, 836, 1278, 1370
BmiI GGNNCC 2 cut(s) 238, 880
BmrFI CCNGG 3 cut(s) 450, 1087, 1276
BmrI ACTGGG 1 cut(s) 465
BmsI GCATC 1 cut(s) 778
BmuI ACTGGG 1 cut(s) 465
BpiI GAAGAC 2 cut(s) 38, 368
Bpu10I CCTNAGC 1 cut(s) 1151
Bpu14I TTCGAA 1 cut(s) 197
BpuEI CTTGAG 1 cut(s) 1205
BpuMI CCSGG 2 cut(s) 450, 1087
BsaI GGTCTC 1 cut(s) 207
BsaJI CCNNGG 5 cut(s) 623, 671, 990, 1085, 1328
Bsc4I CCNNNNNNNGG 3 cut(s) 455, 456, 1334
Bse1I ACTGG 7 cut(s) 97, 166, 460, 746, 919, 1072, 1233
Bse21I CCTNAGG 1 cut(s) 840
BseBI CCWGG 1 cut(s) 1276
BseDI CCNNGG 5 cut(s) 623, 671, 990, 1085, 1328
BseGI GGATG 5 cut(s) 46, 101, 272, 546, 550
BseLI CCNNNNNNNGG 3 cut(s) 455, 456, 1334
BseMII CTCAG 4 cut(s) 326, 360, 831, 1165
BseNI ACTGG 7 cut(s) 97, 166, 460, 746, 919, 1072, 1233
BseRI GAGGAG 1 cut(s) 1075
BseSI GKGCMC 1 cut(s) 1120
BseXI GCAGC 3 cut(s) 691, 905, 1277
BshFI GGCC 3 cut(s) 719, 1139, 1232
BsiHKAI GWGCWC 2 cut(s) 1020, 1120
BsiSI CCGG 2 cut(s) 450, 1087
BslFI GGGAC 1 cut(s) 133
BslI CCNNNNNNNGG 3 cut(s) 455, 456, 1334
BsmAI GTCTC 3 cut(s) 207, 1033, 1047
BsmFI GGGAC 1 cut(s) 133
BsnI GGCC 3 cut(s) 719, 1139, 1232
Bso31I GGTCTC 1 cut(s) 207
Bsp119I TTCGAA 1 cut(s) 197
Bsp1286I GDGCHC 2 cut(s) 1020, 1120
Bsp143I GATC 6 cut(s) 137, 236, 541, 656, 986, 1107
Bsp19I CCATGG 2 cut(s) 671, 990
BspACI CCGC 3 cut(s) 182, 791, 1140
BspANI GGCC 3 cut(s) 719, 1139, 1232
BspCNI CTCAG 4 cut(s) 325, 361, 832, 1164
BspHI TCATGA 1 cut(s) 727
BspLI GGNNCC 2 cut(s) 238, 880
BspPI GGATC 5 cut(s) 132, 231, 244, 651, 981
BspT104I TTCGAA 1 cut(s) 197
BspTI CTTAAG 1 cut(s) 341
BspTNI GGTCTC 1 cut(s) 207
BsrI ACTGG 7 cut(s) 97, 166, 460, 746, 919, 1072, 1233
BssECI CCNNGG 5 cut(s) 623, 671, 990, 1085, 1328
BssMI GATC 6 cut(s) 137, 236, 541, 656, 986, 1107
BssSI CACGAG 2 cut(s) 228, 867
BssT1I CCWWGG 4 cut(s) 623, 671, 990, 1328
Bst2BI CACGAG 2 cut(s) 228, 867
Bst2UI CCWGG 1 cut(s) 1276
Bst4CI ACNGT 2 cut(s) 466, 758
Bst6I CTCTTC 3 cut(s) 653, 672, 926
BstAFI CTTAAG 1 cut(s) 341
BstAPI GCANNNNNTGC 1 cut(s) 701
BstBI TTCGAA 1 cut(s) 197
BstC8I GCNNGC 6 cut(s) 128, 348, 519, 1137, 1263, 1314
BstDEI CTNAG 5 cut(s) 312, 369, 840, 1151, 1293
BstDSI CCRYGG 2 cut(s) 671, 990
BstF5I GGATG 5 cut(s) 46, 101, 272, 546, 550
BstH2I RGCGCY 1 cut(s) 156
BstHHI GCGC 1 cut(s) 155
BstKTI GATC 6 cut(s) 140, 239, 544, 659, 989, 1110
BstMAI GTCTC 3 cut(s) 207, 1033, 1047
BstMBI GATC 6 cut(s) 137, 236, 541, 656, 986, 1107
BstMWI GCNNNNNNNGC 2 cut(s) 701, 1124
BstNI CCWGG 1 cut(s) 1276
BstNSI RCATGY 1 cut(s) 130
BstSCI CCNGG 3 cut(s) 448, 1085, 1274
BstSFI CTRYAG 1 cut(s) 943
BstSLI GKGCMC 1 cut(s) 1120
BstV1I GCAGC 3 cut(s) 691, 905, 1277
BstV2I GAAGAC 2 cut(s) 38, 368
BstX2I RGATCY 4 cut(s) 137, 236, 656, 986
BstYI RGATCY 4 cut(s) 137, 236, 656, 986
Bsu36I CCTNAGG 1 cut(s) 840
BsuRI GGCC 3 cut(s) 719, 1139, 1232
BtgI CCRYGG 2 cut(s) 671, 990
BtsCI GGATG 5 cut(s) 46, 101, 272, 546, 550
BtsI GCAGTG 2 cut(s) 87, 1144
BtsIMutI CAGTG 3 cut(s) 87, 295, 1144
Cac8I GCNNGC 6 cut(s) 128, 348, 519, 1137, 1263, 1314
CciI TCATGA 1 cut(s) 727
CfoI GCGC 1 cut(s) 155
Cfr13I GGNCC 4 cut(s) 10, 836, 1278, 1370
Csp6I GTAC 3 cut(s) 267, 453, 1325
CviAII CATG 8 cut(s) 127, 157, 488, 672, 728, 857, 991, 1258
CviQI GTAC 3 cut(s) 267, 453, 1325
DdeI CTNAG 5 cut(s) 312, 369, 840, 1151, 1293
DpnI GATC 6 cut(s) 139, 238, 543, 658, 988, 1109
DpnII GATC 6 cut(s) 137, 236, 541, 656, 986, 1107
DraI TTTAAA 1 cut(s) 766
DraIII CACNNNGTG 1 cut(s) 701
DrdI GACNNNNNNGTC 2 cut(s) 372, 501
DseDI GACNNNNNNGTC 2 cut(s) 372, 501
EaeI YGGCCR 2 cut(s) 1137, 1230
Eam1104I CTCTTC 3 cut(s) 653, 672, 926
EarI CTCTTC 3 cut(s) 653, 672, 926
Eco130I CCWWGG 4 cut(s) 623, 671, 990, 1328
Eco31I GGTCTC 1 cut(s) 207
Eco47I GGWCC 4 cut(s) 10, 836, 1278, 1370
Eco57I CTGAAG 4 cut(s) 320, 346, 482, 634
Eco81I CCTNAGG 1 cut(s) 840
EcoRII CCWGG 1 cut(s) 1274
EcoT14I CCWWGG 4 cut(s) 623, 671, 990, 1328
ErhI CCWWGG 4 cut(s) 623, 671, 990, 1328
FaeI CATG 8 cut(s) 130, 160, 491, 675, 731, 860, 994, 1261
FalI AAGNNNNNCTT 2 cut(s) 501, 533
FaqI GGGAC 1 cut(s) 133
FatI CATG 8 cut(s) 126, 156, 487, 671, 727, 856, 990, 1257
Fnu4HI GCNGC 4 cut(s) 705, 894, 1140, 1266
FokI GGATG 5 cut(s) 53, 108, 259, 533, 537
Fsp4HI GCNGC 4 cut(s) 705, 894, 1140, 1266
FspBI CTAG 3 cut(s) 252, 354, 1170
GlaI GCGC 1 cut(s) 154
GluI GCNGC 4 cut(s) 705, 894, 1140, 1266
HaeII RGCGCY 1 cut(s) 156
HaeIII GGCC 3 cut(s) 719, 1139, 1232
HapII CCGG 2 cut(s) 450, 1087
HhaI GCGC 1 cut(s) 155
Hin1II CATG 8 cut(s) 130, 160, 491, 675, 731, 860, 994, 1261
Hin6I GCGC 1 cut(s) 153
HinP1I GCGC 1 cut(s) 153
HindIII AAGCTT 1 cut(s) 806
HinfI GANTC 2 cut(s) 373, 478
HpaII CCGG 2 cut(s) 450, 1087
HphI GGTGA 5 cut(s) 40, 395, 551, 857, 1395
Hpy166II GTNNAC 4 cut(s) 610, 864, 1118, 1281
Hpy188I TCNGA 5 cut(s) 320, 365, 653, 814, 924
Hpy188III TCNNGA 3 cut(s) 135, 728, 839
Hpy8I GTNNAC 4 cut(s) 610, 864, 1118, 1281
HpyAV CCTTC 3 cut(s) 141, 295, 1088
HpyCH4III ACNGT 2 cut(s) 466, 758
HpyCH4V TGCA 7 cut(s) 126, 470, 695, 707, 893, 1118, 1261
HpyF10VI GCNNNNNNNGC 2 cut(s) 701, 1124
HpyF3I CTNAG 5 cut(s) 312, 369, 840, 1151, 1293
Hsp92II CATG 8 cut(s) 130, 160, 491, 675, 731, 860, 994, 1261
HspAI GCGC 1 cut(s) 153
Kzo9I GATC 6 cut(s) 137, 236, 541, 656, 986, 1107
LmnI GCTCC 5 cut(s) 45, 321, 442, 1015, 1350
Lsp1109I GCAGC 3 cut(s) 691, 905, 1277
LweI GCATC 1 cut(s) 778
MaeI CTAG 3 cut(s) 252, 354, 1170
MaeIII GTNAC 4 cut(s) 503, 575, 758, 1157
MalI GATC 6 cut(s) 139, 238, 543, 658, 988, 1109
MboI GATC 6 cut(s) 137, 236, 541, 656, 986, 1107
MflI RGATCY 4 cut(s) 137, 236, 656, 986
MhlI GDGCHC 2 cut(s) 1020, 1120
MlsI TGGCCA 1 cut(s) 1232
MluCI AATT 6 cut(s) 323, 525, 556, 570, 690, 1077
MluNI TGGCCA 1 cut(s) 1232
MlyI GAGTC 2 cut(s) 382, 472
Mox20I TGGCCA 1 cut(s) 1232
MroXI GAANNNNTTC 2 cut(s) 268, 735
MscI TGGCCA 1 cut(s) 1232
MseI TTAA 8 cut(s) 15, 105, 333, 342, 474, 569, 765, 1076
Msp20I TGGCCA 1 cut(s) 1232
MspA1I CMGCKG 1 cut(s) 1135
MspCI CTTAAG 1 cut(s) 341
MspI CCGG 2 cut(s) 450, 1087
MspR9I CCNGG 3 cut(s) 450, 1087, 1276
MvaI CCWGG 1 cut(s) 1276
MwoI GCNNNNNNNGC 2 cut(s) 701, 1124
NciI CCSGG 2 cut(s) 450, 1087
NcoI CCATGG 2 cut(s) 671, 990
NdeII GATC 6 cut(s) 137, 236, 541, 656, 986, 1107
NlaIII CATG 8 cut(s) 130, 160, 491, 675, 731, 860, 994, 1261
NlaIV GGNNCC 2 cut(s) 238, 880
NmuCI GTSAC 3 cut(s) 503, 758, 1157
NspI RCATGY 1 cut(s) 130
NspV TTCGAA 1 cut(s) 197
PaeI GCATGC 1 cut(s) 130
PagI TCATGA 1 cut(s) 727
PdmI GAANNNNTTC 2 cut(s) 268, 735
PkrI GCNGC 4 cut(s) 706, 895, 1141, 1267
PleI GAGTC 2 cut(s) 381, 472
PpsI GAGTC 2 cut(s) 381, 472
Psp6I CCWGG 1 cut(s) 1274
PspGI CCWGG 1 cut(s) 1274
PspN4I GGNNCC 2 cut(s) 238, 880
PspPI GGNCC 4 cut(s) 10, 836, 1278, 1370
PsuI RGATCY 4 cut(s) 137, 236, 656, 986
PvuII CAGCTG 1 cut(s) 1135
RsaI GTAC 3 cut(s) 268, 454, 1326
RsaNI GTAC 3 cut(s) 267, 453, 1325
SaqAI TTAA 8 cut(s) 15, 105, 333, 342, 474, 569, 765, 1076
SatI GCNGC 4 cut(s) 705, 894, 1140, 1266
Sau3AI GATC 6 cut(s) 137, 236, 541, 656, 986, 1107
Sau96I GGNCC 4 cut(s) 10, 836, 1278, 1370
ScaI AGTACT 1 cut(s) 268
SchI GAGTC 2 cut(s) 382, 472
ScrFI CCNGG 3 cut(s) 450, 1087, 1276
SduI GDGCHC 2 cut(s) 1020, 1120
SfaNI GCATC 1 cut(s) 778
SfcI CTRYAG 1 cut(s) 943
SfuI TTCGAA 1 cut(s) 197
SinI GGWCC 4 cut(s) 10, 836, 1278, 1370
SmlI CTYRAG 2 cut(s) 341, 1220
SmoI CTYRAG 2 cut(s) 341, 1220
SpeI ACTAGT 1 cut(s) 251
SphI GCATGC 1 cut(s) 130
Sse9I AATT 6 cut(s) 323, 525, 556, 570, 690, 1077
SsiI CCGC 3 cut(s) 182, 791, 1140
SspI AATATT 1 cut(s) 778
SspMI CTAG 3 cut(s) 252, 354, 1170
StyD4I CCNGG 3 cut(s) 448, 1085, 1274
StyI CCWWGG 4 cut(s) 623, 671, 990, 1328
TaaI ACNGT 2 cut(s) 466, 758
TaqI TCGA 6 cut(s) 197, 420, 585, 929, 966, 1106
TaqII GACCGA 1 cut(s) 231
TasI AATT 6 cut(s) 323, 525, 556, 570, 690, 1077
TatI WGTACW 1 cut(s) 266
TauI GCSGC 1 cut(s) 1142
Tru1I TTAA 8 cut(s) 15, 105, 333, 342, 474, 569, 765, 1076
Tru9I TTAA 8 cut(s) 15, 105, 333, 342, 474, 569, 765, 1076
TscAI CASTG 3 cut(s) 87, 295, 1151
TseFI GTSAC 3 cut(s) 503, 758, 1157
TseI GCWGC 3 cut(s) 704, 893, 1265
Tsp45I GTSAC 3 cut(s) 503, 758, 1157
TspDTI ATGAA 5 cut(s) 261, 351, 701, 716, 744
TspGWI ACGGA 1 cut(s) 1350
TspRI CASTG 3 cut(s) 87, 295, 1151
Vha464I CTTAAG 1 cut(s) 341
VneI GTGCAC 1 cut(s) 1116
VpaK11BI GGWCC 4 cut(s) 10, 836, 1278, 1370
XapI RAATTY 2 cut(s) 323, 525
XceI RCATGY 1 cut(s) 130
XcmI CCANNNNNNNNNTGG 1 cut(s) 871
XmnI GAANNNNTTC 2 cut(s) 268, 735
XspI CTAG 3 cut(s) 252, 354, 1170
ZrmI AGTACT 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.