pycom16g06800

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
OG0000641
Physical Location & Seq
Reverse (-)
4403063 .. 4404358
1296 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom16g06800.4

Sequence Viewer

Length: 819 bp
ATGCCTCGAGGGAGCTTGGAGAACCATCTATTTAGGAGGTCGTTGCCTCTTCCATGGTCTATTCGAATGAAGATTGCATTAGGTGCTGCAAAAGGCCTTGCTTTTCTCCACGAGGAAGCAGAAAGATCGATCTATCGTGACTTTAAAACCTCCAACATCTTATTGGACGCCGATTATAATGCCAAGCTGTCTGACTTCGGACTTGCCAAAGATGGTCCTGAGGGTGATAAAACTCATGTCTCCACCCGTGTGATGGGAACTTATGGTTATGCAGCTCCTGAATATGTAATGACTGGACATCTTACATCCAGGAGTGATGTATATAGTTTTGGCGTGGTTTTACTTGAGATGCTGACCGGCAGAAGATCCATGGACAAAAACCGACCCAATGGCGAACATAACCTTGTGGAATGGGCACGGCCACATCTAGGAGAAAGAAGAAGATTCTACCGGTTGATAGACCCTCGGCTTGAAGGCCACTTTTCGATAAAAGGTGTCCAAAAAGCCGCACAACTAGCTGCCCACTGCCTTAGTCGAGATCCAAAAGCCAGGCCCCTAATGAGTGAAGTTGTGGAAGTCTTAAAGCCCCTGCCAGCCCTCAAGGATATGGCAAGCTCATCATATTATTTCCAGACAATGCAAGGTGACCGTGTCGGTTCCAGCCCAAATACCAGAAACAGCGTCAGACCGCAAGGAGGATTGCTGATGAGGAACGGGCATCATCAGCAGAGGAGCCTTTCGATACCAAATGGTACCCATGCTTCTCCATATCACCATCAACATCCCCATCCATCGCCAAAACCTAATGTCAAACCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

273

Amino Acids

30.59

Weight (kDa)

9.92

Isoelectric Point (pI)

42.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 177
AbsI CCTCGAGG 1 cut(s) 6
Acc65I GGTACC 1 cut(s) 752
AccB1I GGYRCC 1 cut(s) 752
AciI CCGC 2 cut(s) 507, 689
AclWI GGATC 2 cut(s) 360, 533
AcoI YGGCCR 1 cut(s) 419
AcyI GRCGYC 1 cut(s) 168
AfaI GTAC 1 cut(s) 754
AfiI CCNNNNNNNGG 3 cut(s) 253, 428, 695
AgeI ACCGGT 1 cut(s) 450
AgsI TTSAA 1 cut(s) 473
AjnI CCWGG 2 cut(s) 308, 548
AleI CACNNNNGTG 1 cut(s) 248
AluBI AGCT 5 cut(s) 15, 187, 275, 518, 615
AluI AGCT 5 cut(s) 15, 187, 275, 518, 615
Alw26I GTCTC 1 cut(s) 244
AlwI GGATC 2 cut(s) 360, 533
AlwNI CAGNNNCTG 1 cut(s) 278
Ama87I CYCGRG 1 cut(s) 6
AoxI GGCC 4 cut(s) 94, 419, 475, 551
ApeKI GCWGC 3 cut(s) 86, 272, 518
AsiGI ACCGGT 1 cut(s) 450
Asp718I GGTACC 1 cut(s) 752
AspS9I GGNCC 2 cut(s) 215, 552
AsuHPI GGTGA 3 cut(s) 236, 656, 764
AsuII TTCGAA 1 cut(s) 64
AvaI CYCGRG 1 cut(s) 6
AvaII GGWCC 1 cut(s) 215
AxyI CCTNAGG 1 cut(s) 219
BaeGI GKGCMC 1 cut(s) 418
BanI GGYRCC 1 cut(s) 752
BarI GAAGNNNNNNTAC 2 cut(s) 745, 777
BauI CACGAG 1 cut(s) 110
BbvI GCAGC 3 cut(s) 73, 284, 505
BccI CCATC 6 cut(s) 33, 206, 247, 783, 795, 799
BceAI ACGGC 1 cut(s) 434
BcgI CGANNNNNNTGC 4 cut(s) 108, 142, 161, 195
BciT130I CCWGG 2 cut(s) 310, 550
BcoDI GTCTC 1 cut(s) 244
BfaI CTAG 2 cut(s) 428, 515
BisI GCNGC 4 cut(s) 87, 273, 507, 519
BlsI GCNGC 4 cut(s) 88, 274, 508, 520
Bme1390I CCNGG 2 cut(s) 310, 550
Bme18I GGWCC 1 cut(s) 215
BmeT110I CYCGRG 1 cut(s) 6
BmgT120I GGNCC 2 cut(s) 215, 552
BmiI GGNNCC 4 cut(s) 554, 658, 734, 754
BmrFI CCNGG 2 cut(s) 310, 550
BmsI GCATC 2 cut(s) 339, 727
Bpu14I TTCGAA 1 cut(s) 64
BpuEI CTTGAG 2 cut(s) 365, 584
Bsa29I ATCGAT 1 cut(s) 128
BsaHI GRCGYC 1 cut(s) 168
BsaJI CCNNGG 3 cut(s) 53, 369, 464
BsaWI WCCGGW 1 cut(s) 450
Bsc4I CCNNNNNNNGG 3 cut(s) 253, 428, 695
Bse118I RCCGGY 2 cut(s) 356, 450
Bse1I ACTGG 1 cut(s) 298
Bse21I CCTNAGG 1 cut(s) 219
BseBI CCWGG 2 cut(s) 310, 550
BseCI ATCGAT 1 cut(s) 128
BseDI CCNNGG 3 cut(s) 53, 369, 464
BseGI GGATG 3 cut(s) 305, 781, 787
BseLI CCNNNNNNNGG 3 cut(s) 253, 428, 695
BseMII CTCAG 1 cut(s) 210
BseNI ACTGG 1 cut(s) 298
BseRI GAGGAG 1 cut(s) 745
BseSI GKGCMC 1 cut(s) 418
BseXI GCAGC 3 cut(s) 73, 284, 505
BshFI GGCC 4 cut(s) 96, 421, 477, 553
BshNI GGYRCC 1 cut(s) 752
BshTI ACCGGT 1 cut(s) 450
BshVI ATCGAT 1 cut(s) 128
BsiHKCI CYCGRG 1 cut(s) 6
BsiSI CCGG 2 cut(s) 357, 451
BslI CCNNNNNNNGG 3 cut(s) 253, 428, 695
BsmAI GTCTC 1 cut(s) 244
BsnI GGCC 4 cut(s) 96, 421, 477, 553
BsoBI CYCGRG 1 cut(s) 6
Bsp119I TTCGAA 1 cut(s) 64
Bsp1286I GDGCHC 1 cut(s) 418
Bsp143I GATC 4 cut(s) 125, 129, 365, 538
Bsp19I CCATGG 2 cut(s) 53, 369
BspACI CCGC 2 cut(s) 507, 689
BspANI GGCC 4 cut(s) 96, 421, 477, 553
BspCNI CTCAG 1 cut(s) 211
BspDI ATCGAT 1 cut(s) 128
BspLI GGNNCC 4 cut(s) 554, 658, 734, 754
BspPI GGATC 2 cut(s) 360, 533
BspT104I TTCGAA 1 cut(s) 64
BspT107I GGYRCC 1 cut(s) 752
BsrFI RCCGGY 2 cut(s) 356, 450
BsrI ACTGG 1 cut(s) 298
BssAI RCCGGY 2 cut(s) 356, 450
BssECI CCNNGG 3 cut(s) 53, 369, 464
BssMI GATC 4 cut(s) 125, 129, 365, 538
BssNI GRCGYC 1 cut(s) 168
BssSI CACGAG 1 cut(s) 110
BssT1I CCWWGG 2 cut(s) 53, 369
Bst2BI CACGAG 1 cut(s) 110
Bst2UI CCWGG 2 cut(s) 310, 550
Bst4CI ACNGT 2 cut(s) 650, 816
Bst6I CTCTTC 1 cut(s) 54
BstACI GRCGYC 1 cut(s) 168
BstAPI GCANNNNNTGC 1 cut(s) 83
BstBI TTCGAA 1 cut(s) 64
BstC8I GCNNGC 2 cut(s) 594, 613
BstDEI CTNAG 2 cut(s) 219, 530
BstDSI CCRYGG 2 cut(s) 53, 369
BstEII GGTNACC 1 cut(s) 644
BstF5I GGATG 3 cut(s) 305, 781, 787
BstKTI GATC 4 cut(s) 128, 132, 368, 541
BstMAI GTCTC 1 cut(s) 244
BstMBI GATC 4 cut(s) 125, 129, 365, 538
BstMWI GCNNNNNNNGC 3 cut(s) 83, 515, 724
BstNI CCWGG 2 cut(s) 310, 550
BstPI GGTNACC 1 cut(s) 644
BstSCI CCNGG 2 cut(s) 308, 548
BstSLI GKGCMC 1 cut(s) 418
BstV1I GCAGC 3 cut(s) 73, 284, 505
BstX2I RGATCY 2 cut(s) 365, 538
BstYI RGATCY 2 cut(s) 365, 538
Bsu15I ATCGAT 1 cut(s) 128
Bsu36I CCTNAGG 1 cut(s) 219
BsuRI GGCC 4 cut(s) 96, 421, 477, 553
BsuTUI ATCGAT 1 cut(s) 128
BtgI CCRYGG 2 cut(s) 53, 369
BtgZI GCGATG 1 cut(s) 777
BtsCI GGATG 3 cut(s) 305, 781, 787
BtsI GCAGTG 1 cut(s) 523
BtsIMutI CAGTG 1 cut(s) 523
Cac8I GCNNGC 2 cut(s) 594, 613
CaiI CAGNNNCTG 1 cut(s) 278
Cfr10I RCCGGY 2 cut(s) 356, 450
Cfr13I GGNCC 2 cut(s) 215, 552
ClaI ATCGAT 1 cut(s) 128
CseI GACGC 2 cut(s) 176, 670
Csp6I GTAC 1 cut(s) 753
CspAI ACCGGT 1 cut(s) 450
CviAII CATG 4 cut(s) 54, 236, 370, 758
CviQI GTAC 1 cut(s) 753
DdeI CTNAG 2 cut(s) 219, 530
DpnI GATC 4 cut(s) 127, 131, 367, 540
DpnII GATC 4 cut(s) 125, 129, 365, 538
DraI TTTAAA 1 cut(s) 145
EaeI YGGCCR 1 cut(s) 419
Eam1104I CTCTTC 1 cut(s) 54
EarI CTCTTC 1 cut(s) 54
Eco130I CCWWGG 2 cut(s) 53, 369
Eco147I AGGCCT 1 cut(s) 96
Eco47I GGWCC 1 cut(s) 215
Eco81I CCTNAGG 1 cut(s) 219
Eco88I CYCGRG 1 cut(s) 6
Eco91I GGTNACC 1 cut(s) 644
EcoO109I RGGNCCY 1 cut(s) 552
EcoO65I GGTNACC 1 cut(s) 644
EcoRII CCWGG 2 cut(s) 308, 548
EcoT14I CCWWGG 2 cut(s) 53, 369
ErhI CCWWGG 2 cut(s) 53, 369
FaeI CATG 4 cut(s) 57, 239, 373, 761
FatI CATG 4 cut(s) 53, 235, 369, 757
Fnu4HI GCNGC 4 cut(s) 87, 273, 507, 519
FokI GGATG 3 cut(s) 292, 768, 774
Fsp4HI GCNGC 4 cut(s) 87, 273, 507, 519
FspBI CTAG 2 cut(s) 428, 515
GluI GCNGC 4 cut(s) 87, 273, 507, 519
HaeIII GGCC 4 cut(s) 96, 421, 477, 553
HapII CCGG 2 cut(s) 357, 451
HgaI GACGC 2 cut(s) 176, 670
Hin1I GRCGYC 1 cut(s) 168
Hin1II CATG 4 cut(s) 57, 239, 373, 761
HinfI GANTC 1 cut(s) 444
HpaII CCGG 2 cut(s) 357, 451
HphI GGTGA 3 cut(s) 236, 656, 764
Hpy188I TCNGA 3 cut(s) 193, 200, 686
Hpy188III TCNNGA 5 cut(s) 137, 218, 278, 536, 631
HpyAV CCTTC 1 cut(s) 467
HpyCH4III ACNGT 2 cut(s) 650, 816
HpyCH4V TGCA 4 cut(s) 77, 89, 272, 640
HpyF10VI GCNNNNNNNGC 3 cut(s) 83, 515, 724
HpyF3I CTNAG 2 cut(s) 219, 530
Hsp92I GRCGYC 1 cut(s) 168
Hsp92II CATG 4 cut(s) 57, 239, 373, 761
KpnI GGTACC 1 cut(s) 756
Kzo9I GATC 4 cut(s) 125, 129, 365, 538
LmnI GCTCC 3 cut(s) 12, 280, 732
Lsp1109I GCAGC 3 cut(s) 73, 284, 505
LweI GCATC 2 cut(s) 339, 727
MaeI CTAG 2 cut(s) 428, 515
MaeIII GTNAC 2 cut(s) 137, 644
MalI GATC 4 cut(s) 127, 131, 367, 540
MboI GATC 4 cut(s) 125, 129, 365, 538
MboII GAAGA 5 cut(s) 41, 82, 375, 450, 453
MflI RGATCY 2 cut(s) 365, 538
MhlI GDGCHC 1 cut(s) 418
MmeI TCCRAC 1 cut(s) 177
MseI TTAA 2 cut(s) 144, 581
MslI CAYNNNNRTG 1 cut(s) 248
MspI CCGG 2 cut(s) 357, 451
MspR9I CCNGG 2 cut(s) 310, 550
MvaI CCWGG 2 cut(s) 310, 550
MwoI GCNNNNNNNGC 3 cut(s) 83, 515, 724
NcoI CCATGG 2 cut(s) 53, 369
NdeII GATC 4 cut(s) 125, 129, 365, 538
NlaIII CATG 4 cut(s) 57, 239, 373, 761
NlaIV GGNNCC 4 cut(s) 554, 658, 734, 754
NmeAIII GCCGAG 1 cut(s) 445
NmuCI GTSAC 2 cut(s) 137, 644
NspV TTCGAA 1 cut(s) 64
OliI CACNNNNGTG 1 cut(s) 248
PaeR7I CTCGAG 1 cut(s) 6
PceI AGGCCT 1 cut(s) 96
PfeI GAWTC 1 cut(s) 444
PflFI GACNNNGTC 1 cut(s) 650
PfoI TCCNGGA 1 cut(s) 308
PinAI ACCGGT 1 cut(s) 450
PkrI GCNGC 4 cut(s) 88, 274, 508, 520
PsiI TTATAA 1 cut(s) 177
Psp6I CCWGG 2 cut(s) 308, 548
PspEI GGTNACC 1 cut(s) 644
PspGI CCWGG 2 cut(s) 308, 548
PspN4I GGNNCC 4 cut(s) 554, 658, 734, 754
PspPI GGNCC 2 cut(s) 215, 552
PspXI VCTCGAGB 1 cut(s) 6
PstNI CAGNNNCTG 1 cut(s) 278
PsuI RGATCY 2 cut(s) 365, 538
PsyI GACNNNGTC 1 cut(s) 650
RsaI GTAC 1 cut(s) 754
RsaNI GTAC 1 cut(s) 753
RseI CAYNNNNRTG 1 cut(s) 248
SaqAI TTAA 2 cut(s) 144, 581
SatI GCNGC 4 cut(s) 87, 273, 507, 519
Sau3AI GATC 4 cut(s) 125, 129, 365, 538
Sau96I GGNCC 2 cut(s) 215, 552
ScrFI CCNGG 2 cut(s) 310, 550
SduI GDGCHC 1 cut(s) 418
SfaNI GCATC 2 cut(s) 339, 727
Sfr274I CTCGAG 1 cut(s) 6
SfuI TTCGAA 1 cut(s) 64
SinI GGWCC 1 cut(s) 215
SlaI CTCGAG 1 cut(s) 6
SmiMI CAYNNNNRTG 1 cut(s) 248
SmlI CTYRAG 3 cut(s) 6, 344, 599
SmoI CTYRAG 3 cut(s) 6, 344, 599
SseBI AGGCCT 1 cut(s) 96
SsiI CCGC 2 cut(s) 507, 689
SspMI CTAG 2 cut(s) 428, 515
StuI AGGCCT 1 cut(s) 96
StyD4I CCNGG 2 cut(s) 308, 548
StyI CCWWGG 2 cut(s) 53, 369
TaaI ACNGT 2 cut(s) 650, 816
TaqI TCGA 6 cut(s) 7, 64, 128, 485, 535, 740
TauI GCSGC 1 cut(s) 509
TfiI GAWTC 1 cut(s) 444
Tru1I TTAA 2 cut(s) 144, 581
Tru9I TTAA 2 cut(s) 144, 581
TscAI CASTG 1 cut(s) 530
TseFI GTSAC 2 cut(s) 137, 644
TseI GCWGC 3 cut(s) 86, 272, 518
Tsp45I GTSAC 2 cut(s) 137, 644
TspDTI ATGAA 1 cut(s) 83
TspRI CASTG 1 cut(s) 530
Tth111I GACNNNGTC 1 cut(s) 650
VpaK11BI GGWCC 1 cut(s) 215
XcmI CCANNNNNNNNNTGG 2 cut(s) 160, 250
XhoI CTCGAG 1 cut(s) 6
XspI CTAG 2 cut(s) 428, 515
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.