Rmu_ssc0000393.1_g000008

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000393.1
OG0000641
Physical Location & Seq
Forward (+)
61107 .. 65871
4765 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000393.1_g000008.1.cds

Sequence Viewer

Length: 1476 bp
atgggagttggccctgaggctttgcgggttgggatttggaacaagggaaaatcaaaggggaagcaaaaggttgaggaggaagatgaaatcagaggttgttggatgaagtttaggttcatggggagctgcatgtcttcaaagagcaaagtggatagttctacgagtggaaatagcacacaatatgaagatagcaagtctacagttgacacaattcaagaccaagcagtagctccaggtgctttgtcttcagccactagtaacacagaaagtactttgtccactcccaaagcacctgaggaactgaaagttgcttctcagcttcaaagattcaccttcaatgagcttaagtcagcaacaaagaattttagacctgagagtcttttgggagagggcggttttggctgtgtattcaaaggctggatcaatgagactggaactgctccagcaaaacctggttttgggattccagtggctgtaaagactctgaaccatgatggccttcagggtcacaaagaatggatggctgaagttatttatcttggtgaactacttcatcctaatttagtcaaattagttggatatggcatcgaggatgatcaaagattacttgtgtatgagtttatgcctcgagggagcttggagaatcacctctttagaaggtccttgcctcttccttggtccatcagaatgaaaatagctcttgatgctgcaaagggtcttgcatatcttcacgaggaatctgaaagaccagtgatttttcgagattttaaaacatctaacatattattggatgcggactacaatgctaagctttctgattttgggcttgctaaagatggtccagagggagataaaactcatgtctccacccgagtgatgggcacttacggttatgctgcccccgagtatgttatgacaggtcacctcacttcaaaaagtgatgtatatagctttggggtggttctgcttgaaattctgattggacgaagatctatggacaaaaaccgaccccatggggagcagaacttggtggagtgggttcgccctcatcttggagataggcgaagatactaccgactactagatcctcgacttgaaggtcgcttctcaatcaaaggtgcccaaaaggcatttcagttggctgcccactgtctcagtcgcgacccaaaggctagacctcttatgagtgaagttgttgaagtgttgaagcctctgctcaacctcaaggacctagccacttcatctcacctccaaatcatgcccgcagagcgtcctggttccaatctcaattctagaaatggccttggagtgcagggtgggtttccaaggaatggacagccatctagaagccgctctttaccaactggtcccaatgtctcaccatatcaccttgaccatcctcaccgatctcccaaaccatctactcccaactaccccaaatcgacaccaaaatcactcaaacctgctgctgcttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

491

Amino Acids

54.31

Weight (kDa)

9.36

Isoelectric Point (pI)

44.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 375, 1098
AbsI CCTCGAGG 1 cut(s) 627
Acc36I ACCTGC 1 cut(s) 1471
AccB1I GGYRCC 1 cut(s) 1118
AccB7I CCANNNNNTGG 1 cut(s) 1331
AccBSI CCGCTC 1 cut(s) 1353
AccI GTMKAC 1 cut(s) 197
AccII CGCG 1 cut(s) 1161
AciI CCGC 5 cut(s) 25, 393, 794, 1263, 1351
AclWI GGATC 2 cut(s) 428, 1079
AcsI RAATTY 2 cut(s) 361, 972
AcuI CTGAAG 3 cut(s) 231, 485, 546
AfaI GTAC 1 cut(s) 271
AfiI CCNNNNNNNGG 4 cut(s) 458, 877, 1052, 1331
AflII CTTAAG 1 cut(s) 344
AhlI ACTAGT 1 cut(s) 254
AjnI CCWGG 3 cut(s) 232, 451, 1273
AjuI GAANNNNNNNTTGG 4 cut(s) 963, 995, 1116, 1148
AleI CACNNNNGTG 1 cut(s) 872
AluBI AGCT 8 cut(s) 126, 230, 319, 343, 636, 698, 811, 951
AluI AGCT 8 cut(s) 126, 230, 319, 343, 636, 698, 811, 951
Alw26I GTCTC 4 cut(s) 422, 868, 1157, 1381
AlwI GGATC 2 cut(s) 428, 1079
AlwNI CAGNNNCTG 1 cut(s) 473
Ama87I CYCGRG 3 cut(s) 627, 870, 902
AoxI GGCC 3 cut(s) 10, 496, 1300
ApeKI GCWGC 6 cut(s) 126, 707, 896, 1142, 1466, 1469
ApoI RAATTY 2 cut(s) 361, 972
Asp700I GAANNNNTTC 1 cut(s) 549
AspS9I GGNCC 6 cut(s) 11, 660, 678, 839, 1228, 1367
AsuHPI GGTGA 8 cut(s) 322, 554, 638, 914, 1238, 1371, 1379, 1394
AvaI CYCGRG 3 cut(s) 627, 870, 902
AvaII GGWCC 5 cut(s) 660, 678, 839, 1228, 1367
AxyI CCTNAGG 2 cut(s) 15, 294
BaeGI GKGCMC 2 cut(s) 884, 1123
BanI GGYRCC 1 cut(s) 1118
BauI CACGAG 1 cut(s) 731
BbsI GAAGAC 2 cut(s) 126, 237
BbvI GCAGC 6 cut(s) 113, 694, 883, 1129, 1453, 1456
BccI CCATC 8 cut(s) 488, 514, 689, 830, 871, 1348, 1404, 1426
BciT130I CCWGG 3 cut(s) 234, 453, 1275
BclI TGATCA 1 cut(s) 595
BcoDI GTCTC 4 cut(s) 422, 868, 1157, 1381
BcuI ACTAGT 1 cut(s) 254
BfaI CTAG 6 cut(s) 255, 1082, 1173, 1232, 1293, 1344
BfmI CTRYAG 1 cut(s) 198
BfrI CTTAAG 1 cut(s) 344
BfuAI ACCTGC 1 cut(s) 1471
BglI GCCNNNNNGGC 1 cut(s) 1127
BglII AGATCT 1 cut(s) 989
BisI GCNGC 7 cut(s) 127, 708, 897, 1143, 1351, 1467, 1470
BlpI GCTNAGC 1 cut(s) 807
BlsI GCNGC 7 cut(s) 128, 709, 898, 1144, 1352, 1468, 1471
BmcAI AGTACT 1 cut(s) 271
Bme1390I CCNGG 3 cut(s) 234, 453, 1275
Bme18I GGWCC 5 cut(s) 660, 678, 839, 1228, 1367
BmeT110I CYCGRG 3 cut(s) 627, 870, 902
BmgT120I GGNCC 6 cut(s) 11, 660, 678, 839, 1228, 1367
BmiI GGNNCC 3 cut(s) 1120, 1279, 1369
BmrFI CCNGG 3 cut(s) 234, 453, 1275
BmsI GCATC 3 cut(s) 594, 694, 781
BpiI GAAGAC 2 cut(s) 126, 237
BpmI CTGGAG 2 cut(s) 216, 426
Bpu1102I GCTNAGC 1 cut(s) 807
BpuEI CTTGAG 1 cut(s) 1208
BsaJI CCNNGG 4 cut(s) 674, 1012, 1303, 1325
Bsc4I CCNNNNNNNGG 4 cut(s) 458, 877, 1052, 1331
Bse1I ACTGG 4 cut(s) 436, 467, 749, 1369
Bse21I CCTNAGG 2 cut(s) 15, 294
BseBI CCWGG 3 cut(s) 234, 453, 1275
BseDI CCNNGG 4 cut(s) 674, 1012, 1303, 1325
BseGI GGATG 6 cut(s) 108, 525, 553, 598, 796, 1396
BseLI CCNNNNNNNGG 4 cut(s) 458, 877, 1052, 1331
BseMII CTCAG 5 cut(s) 6, 285, 329, 363, 1168
BseNI ACTGG 4 cut(s) 436, 467, 749, 1369
BseRI GAGGAG 1 cut(s) 89
BseSI GKGCMC 2 cut(s) 884, 1123
BseXI GCAGC 6 cut(s) 113, 694, 883, 1129, 1453, 1456
BsgI GTGCAG 1 cut(s) 1331
Bsh1236I CGCG 1 cut(s) 1161
BshFI GGCC 3 cut(s) 12, 498, 1302
BshNI GGYRCC 1 cut(s) 1118
BsiHKCI CYCGRG 3 cut(s) 627, 870, 902
BslFI GGGAC 1 cut(s) 1353
BslI CCNNNNNNNGG 4 cut(s) 458, 877, 1052, 1331
BsmAI GTCTC 4 cut(s) 422, 868, 1157, 1381
BsmFI GGGAC 1 cut(s) 1353
BsnI GGCC 3 cut(s) 12, 498, 1302
BsoBI CYCGRG 3 cut(s) 627, 870, 902
Bsp1286I GDGCHC 2 cut(s) 884, 1123
Bsp143I GATC 5 cut(s) 420, 595, 989, 1084, 1406
Bsp1720I GCTNAGC 1 cut(s) 807
Bsp19I CCATGG 1 cut(s) 1012
Bsp68I TCGCGA 1 cut(s) 1161
BspACI CCGC 5 cut(s) 25, 393, 794, 1263, 1351
BspANI GGCC 3 cut(s) 12, 498, 1302
BspCNI CTCAG 5 cut(s) 7, 286, 328, 364, 1167
BspFNI CGCG 1 cut(s) 1161
BspLI GGNNCC 3 cut(s) 1120, 1279, 1369
BspMI ACCTGC 1 cut(s) 1471
BspPI GGATC 2 cut(s) 428, 1079
BspT107I GGYRCC 1 cut(s) 1118
BspTI CTTAAG 1 cut(s) 344
BsrBI CCGCTC 1 cut(s) 1353
BsrI ACTGG 4 cut(s) 436, 467, 749, 1369
BssECI CCNNGG 4 cut(s) 674, 1012, 1303, 1325
BssMI GATC 5 cut(s) 420, 595, 989, 1084, 1406
BssSI CACGAG 1 cut(s) 731
BssT1I CCWWGG 4 cut(s) 674, 1012, 1303, 1325
Bst2BI CACGAG 1 cut(s) 731
Bst2UI CCWGG 3 cut(s) 234, 453, 1275
Bst4CI ACNGT 3 cut(s) 202, 890, 1151
Bst6I CTCTTC 1 cut(s) 675
BstAFI CTTAAG 1 cut(s) 344
BstC8I GCNNGC 2 cut(s) 828, 1263
BstDEI CTNAG 6 cut(s) 15, 294, 315, 372, 807, 1154
BstDSI CCRYGG 1 cut(s) 1012
BstEII GGTNACC 1 cut(s) 920
BstF5I GGATG 6 cut(s) 108, 525, 553, 598, 796, 1396
BstFNI CGCG 1 cut(s) 1161
BstKTI GATC 5 cut(s) 423, 598, 992, 1087, 1409
BstMAI GTCTC 4 cut(s) 422, 868, 1157, 1381
BstMBI GATC 5 cut(s) 420, 595, 989, 1084, 1406
BstMWI GCNNNNNNNGC 5 cut(s) 236, 399, 704, 1127, 1267
BstNI CCWGG 3 cut(s) 234, 453, 1275
BstNSI RCATGY 1 cut(s) 133
BstPI GGTNACC 1 cut(s) 920
BstSCI CCNGG 3 cut(s) 232, 451, 1273
BstSFI CTRYAG 1 cut(s) 198
BstSLI GKGCMC 2 cut(s) 884, 1123
BstUI CGCG 1 cut(s) 1161
BstV1I GCAGC 6 cut(s) 113, 694, 883, 1129, 1453, 1456
BstV2I GAAGAC 2 cut(s) 126, 237
BstX2I RGATCY 2 cut(s) 989, 1084
BstYI RGATCY 2 cut(s) 989, 1084
Bsu36I CCTNAGG 2 cut(s) 15, 294
BsuRI GGCC 3 cut(s) 12, 498, 1302
BtgI CCRYGG 1 cut(s) 1012
BtsCI GGATG 6 cut(s) 108, 525, 553, 598, 796, 1396
BtsIMutI CAGTG 3 cut(s) 474, 756, 1147
BtuMI TCGCGA 1 cut(s) 1161
BveI ACCTGC 1 cut(s) 1471
Cac8I GCNNGC 2 cut(s) 828, 1263
CaiI CAGNNNCTG 1 cut(s) 473
Cfr13I GGNCC 6 cut(s) 11, 660, 678, 839, 1228, 1367
CseI GACGC 1 cut(s) 1259
CsiI ACCWGGT 1 cut(s) 451
Csp6I GTAC 1 cut(s) 270
CviAII CATG 6 cut(s) 118, 130, 491, 860, 1013, 1258
CviQI GTAC 1 cut(s) 270
DdeI CTNAG 6 cut(s) 15, 294, 315, 372, 807, 1154
DpnI GATC 5 cut(s) 422, 597, 991, 1086, 1408
DpnII GATC 5 cut(s) 420, 595, 989, 1084, 1406
DraI TTTAAA 1 cut(s) 769
DrdI GACNNNNNNGTC 2 cut(s) 375, 1098
DseDI GACNNNNNNGTC 2 cut(s) 375, 1098
Eam1104I CTCTTC 1 cut(s) 675
EarI CTCTTC 1 cut(s) 675
Eco130I CCWWGG 4 cut(s) 674, 1012, 1303, 1325
Eco47I GGWCC 5 cut(s) 660, 678, 839, 1228, 1367
Eco57I CTGAAG 3 cut(s) 231, 485, 546
Eco81I CCTNAGG 2 cut(s) 15, 294
Eco88I CYCGRG 3 cut(s) 627, 870, 902
Eco91I GGTNACC 1 cut(s) 920
EcoO109I RGGNCCY 2 cut(s) 660, 1228
EcoO65I GGTNACC 1 cut(s) 920
EcoRII CCWGG 3 cut(s) 232, 451, 1273
EcoT14I CCWWGG 4 cut(s) 674, 1012, 1303, 1325
ErhI CCWWGG 4 cut(s) 674, 1012, 1303, 1325
FaeI CATG 6 cut(s) 121, 133, 494, 863, 1016, 1261
FalI AAGNNNNNCTT 2 cut(s) 1339, 1371
FaqI GGGAC 1 cut(s) 1353
FatI CATG 6 cut(s) 117, 129, 490, 859, 1012, 1257
FauI CCCGC 2 cut(s) 18, 1270
FbaI TGATCA 1 cut(s) 595
FblI GTMKAC 1 cut(s) 197
Fnu4HI GCNGC 7 cut(s) 127, 708, 897, 1143, 1351, 1467, 1470
FokI GGATG 6 cut(s) 115, 532, 540, 605, 803, 1383
Fsp4HI GCNGC 7 cut(s) 127, 708, 897, 1143, 1351, 1467, 1470
FspBI CTAG 6 cut(s) 255, 1082, 1173, 1232, 1293, 1344
GluI GCNGC 7 cut(s) 127, 708, 897, 1143, 1351, 1467, 1470
GsuI CTGGAG 2 cut(s) 216, 426
HaeIII GGCC 3 cut(s) 12, 498, 1302
HgaI GACGC 1 cut(s) 1259
Hin1II CATG 6 cut(s) 121, 133, 494, 863, 1016, 1261
HincII GTYRAC 1 cut(s) 205
HindII GTYRAC 1 cut(s) 205
HindIII AAGCTT 1 cut(s) 809
HinfI GANTC 6 cut(s) 327, 376, 463, 481, 643, 737
HphI GGTGA 8 cut(s) 322, 554, 638, 914, 1238, 1371, 1379, 1394
Hpy166II GTNNAC 4 cut(s) 198, 205, 279, 545
Hpy188I TCNGA 6 cut(s) 92, 486, 686, 742, 817, 978
Hpy188III TCNNGA 8 cut(s) 215, 701, 731, 761, 842, 1160, 1293, 1344
Hpy8I GTNNAC 4 cut(s) 198, 205, 279, 545
HpyAV CCTTC 4 cut(s) 343, 509, 651, 1091
HpyCH4III ACNGT 3 cut(s) 202, 890, 1151
HpyCH4V TGCA 4 cut(s) 129, 710, 722, 1312
HpyF10VI GCNNNNNNNGC 5 cut(s) 236, 399, 704, 1127, 1267
HpyF3I CTNAG 6 cut(s) 15, 294, 315, 372, 807, 1154
Hsp92II CATG 6 cut(s) 121, 133, 494, 863, 1016, 1261
Ksp22I TGATCA 1 cut(s) 595
Kzo9I GATC 5 cut(s) 420, 595, 989, 1084, 1406
LmnI GCTCC 5 cut(s) 123, 235, 445, 633, 1018
Lsp1109I GCAGC 6 cut(s) 113, 694, 883, 1129, 1453, 1456
LweI GCATC 3 cut(s) 594, 694, 781
MabI ACCWGGT 1 cut(s) 451
MaeI CTAG 6 cut(s) 255, 1082, 1173, 1232, 1293, 1344
MaeIII GTNAC 3 cut(s) 257, 506, 920
MalI GATC 5 cut(s) 422, 597, 991, 1086, 1408
MbiI CCGCTC 1 cut(s) 1353
MboI GATC 5 cut(s) 420, 595, 989, 1084, 1406
MboII GAAGA 8 cut(s) 92, 126, 197, 237, 662, 719, 999, 1077
MflI RGATCY 2 cut(s) 989, 1084
MhlI GDGCHC 2 cut(s) 884, 1123
MluCI AATT 6 cut(s) 210, 361, 559, 569, 972, 1288
MlyI GAGTC 2 cut(s) 385, 475
MmeI TCCRAC 2 cut(s) 80, 556
MroXI GAANNNNTTC 1 cut(s) 549
MseI TTAA 2 cut(s) 345, 768
MslI CAYNNNNRTG 2 cut(s) 686, 872
MspCI CTTAAG 1 cut(s) 344
MspR9I CCNGG 3 cut(s) 234, 453, 1275
MvaI CCWGG 3 cut(s) 234, 453, 1275
MvnI CGCG 1 cut(s) 1161
MwoI GCNNNNNNNGC 5 cut(s) 236, 399, 704, 1127, 1267
NcoI CCATGG 1 cut(s) 1012
NdeII GATC 5 cut(s) 420, 595, 989, 1084, 1406
NlaIII CATG 6 cut(s) 121, 133, 494, 863, 1016, 1261
NlaIV GGNNCC 3 cut(s) 1120, 1279, 1369
NmuCI GTSAC 2 cut(s) 506, 920
NruI TCGCGA 1 cut(s) 1161
NspI RCATGY 1 cut(s) 133
OliI CACNNNNGTG 1 cut(s) 872
PaeR7I CTCGAG 1 cut(s) 627
PdmI GAANNNNTTC 1 cut(s) 549
PfeI GAWTC 4 cut(s) 327, 463, 643, 737
PflMI CCANNNNNTGG 1 cut(s) 1331
PkrI GCNGC 7 cut(s) 128, 709, 898, 1144, 1352, 1468, 1471
PleI GAGTC 2 cut(s) 384, 475
PpsI GAGTC 2 cut(s) 384, 475
PpuMI RGGWCCY 2 cut(s) 660, 1228
Psp5II RGGWCCY 2 cut(s) 660, 1228
Psp6I CCWGG 3 cut(s) 232, 451, 1273
PspEI GGTNACC 1 cut(s) 920
PspGI CCWGG 3 cut(s) 232, 451, 1273
PspN4I GGNNCC 3 cut(s) 1120, 1279, 1369
PspPI GGNCC 6 cut(s) 11, 660, 678, 839, 1228, 1367
PspPPI RGGWCCY 2 cut(s) 660, 1228
PspXI VCTCGAGB 1 cut(s) 627
PstNI CAGNNNCTG 1 cut(s) 473
PsuI RGATCY 2 cut(s) 989, 1084
RruI TCGCGA 1 cut(s) 1161
RsaI GTAC 1 cut(s) 271
RsaNI GTAC 1 cut(s) 270
RseI CAYNNNNRTG 2 cut(s) 686, 872
SaqAI TTAA 2 cut(s) 345, 768
SatI GCNGC 7 cut(s) 127, 708, 897, 1143, 1351, 1467, 1470
Sau3AI GATC 5 cut(s) 420, 595, 989, 1084, 1406
Sau96I GGNCC 6 cut(s) 11, 660, 678, 839, 1228, 1367
ScaI AGTACT 1 cut(s) 271
SchI GAGTC 2 cut(s) 385, 475
ScrFI CCNGG 3 cut(s) 234, 453, 1275
SduI GDGCHC 2 cut(s) 884, 1123
SexAI ACCWGGT 1 cut(s) 451
SfaNI GCATC 3 cut(s) 594, 694, 781
SfcI CTRYAG 1 cut(s) 198
Sfr274I CTCGAG 1 cut(s) 627
SinI GGWCC 5 cut(s) 660, 678, 839, 1228, 1367
SlaI CTCGAG 1 cut(s) 627
SmiMI CAYNNNNRTG 2 cut(s) 686, 872
SmlI CTYRAG 3 cut(s) 344, 627, 1223
SmoI CTYRAG 3 cut(s) 344, 627, 1223
SpeI ACTAGT 1 cut(s) 254
Sse9I AATT 6 cut(s) 210, 361, 559, 569, 972, 1288
SsiI CCGC 5 cut(s) 25, 393, 794, 1263, 1351
SspMI CTAG 6 cut(s) 255, 1082, 1173, 1232, 1293, 1344
StyD4I CCNGG 3 cut(s) 232, 451, 1273
StyI CCWWGG 4 cut(s) 674, 1012, 1303, 1325
TaaI ACNGT 3 cut(s) 202, 890, 1151
TaqI TCGA 5 cut(s) 588, 628, 760, 1090, 1442
TasI AATT 6 cut(s) 210, 361, 559, 569, 972, 1288
TatI WGTACW 1 cut(s) 269
TauI GCSGC 1 cut(s) 1353
TfiI GAWTC 4 cut(s) 327, 463, 643, 737
Tru1I TTAA 2 cut(s) 345, 768
Tru9I TTAA 2 cut(s) 345, 768
TscAI CASTG 3 cut(s) 474, 756, 1154
TseFI GTSAC 2 cut(s) 506, 920
TseI GCWGC 6 cut(s) 126, 707, 896, 1142, 1466, 1469
Tsp45I GTSAC 2 cut(s) 506, 920
TspDTI ATGAA 7 cut(s) 99, 106, 119, 198, 542, 704, 1230
TspRI CASTG 3 cut(s) 474, 756, 1154
Van91I CCANNNNNTGG 1 cut(s) 1331
Vha464I CTTAAG 1 cut(s) 344
VpaK11BI GGWCC 5 cut(s) 660, 678, 839, 1228, 1367
XapI RAATTY 2 cut(s) 361, 972
XbaI TCTAGA 2 cut(s) 1292, 1343
XceI RCATGY 1 cut(s) 133
XcmI CCANNNNNNNNNTGG 1 cut(s) 874
XhoI CTCGAG 1 cut(s) 627
XmiI GTMKAC 1 cut(s) 197
XmnI GAANNNNTTC 1 cut(s) 549
XspI CTAG 6 cut(s) 255, 1082, 1173, 1232, 1293, 1344
ZrmI AGTACT 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.