Rh2AG609200
ERF Family

belongs to the protein kinase superfamily

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0000641
Physical Location & Seq
Reverse (-)
83614874 .. 83618755
3882 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG609200.1

Sequence Viewer

Length: 1272 bp
ATGTGTTGGATCTTATGTAAATCAGCGGAAACTAAATCTTCAAATGAAAAAAGTAGAGATCGAGACCTTACTCGTGGAGGGTCCTCTACAACTACTAGTAATGCTGGAAGTACTACATCCACACCCTATTTCAGTGAGGAACTGAAGGTTGCTTCTCAGCTGCGGAAATTCACATTTAATGACCTTAAGTTAGCAACTAGAAACTTCAGGCCGGAATCTCTTCTTGGGGAGGGTGGATTTGGTTGTGTGTTCAAGGGCTGGATAGAGGAGAATGGAACTGCTCCTGTGAAGCCTGGTACTGGGCTTACAGTCGCAGTTAAGACCCTCAACCATGATGGACTTCAGGGTCACAAAGAATGGCTTGCTGAAATTTATTTTCTTGGTGATCTCATCCATCCAAATTTGGTAAAATTGATTGGCTACTCCATTGAAGATGATCAGAGGTTGCTGGTTTATGAGTTTTTACCGCGAGGAAGTTTGGAAAACCACCTATTCAGAAGGTCCCTGCCTCTTCCTTGGTCCATTAGAATGAAAATTGCACTTGGTGCTGCGAAGGGTCTTGCCTTTCTTCATGAAGAAGTTCAAAAACCTGTCATATACCGTGACTTCAAAACATCTAATATCCTATTAGACGCGGATTACAACGCCAAGCTCTCGGATTTTGGACTTGCCAAAGATGGTCCTGAAGGTGATAAGACTCATGTGTCTACGCGAGTCATGGGAACCTATGGTTATGCAGCCCCAGAATATGTGATGACTGGACATTTGACATCAAAGAGTGATGTCTACAGTTTTGGAGTAGTCCTCCTTGAAATGCTAAATGGAAGAAGATCCATGGATAAAAATAGACCAAATGGGGAACACAATCTTGTGGAATGGGCGAGACAACTTTTTGGAGACAAGAGGAGGTTATTCCAGTTAATTGACCCCCGGCTCGAAGGCCATTTTTCAATCAAGGGTGCACAAAAAGCTATCCAACTGGCTGCCCGCTGCCTCAGCCGTGACCCAAAAGCCAGACCAATGATGAGTGAAGTTGTTGAAGCCCTAAAGCCTTTACCAAGCCTCAAGGACATGGCCAGTTCTTCTTATCACTTTCAAACCATGCAAGCAGCTCGTACCAGATCCAACTTGAATGCTAAGAATGGCATTAGAACACAAGCAATCTTTGTACCGAGGAATGGACAACCGGTAAGGAGCTTGTCAAGCCCAAAGGGTCCTCCTGCTTCTCCATGTTATCCTCAGAAATCACCTAAACCTAACTCGAAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

423

Amino Acids

47.12

Weight (kDa)

9.54

Isoelectric Point (pI)

37.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 72 - 347 1.1e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 73 - 349 4.4e-44 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 345, 703
AccI GTMKAC 2 cut(s) 707, 786
AccII CGCG 3 cut(s) 469, 635, 712
AciI CCGC 5 cut(s) 26, 163, 467, 635, 988
AclWI GGATC 3 cut(s) 17, 825, 1116
AcoI YGGCCR 1 cut(s) 1074
AcsI RAATTY 3 cut(s) 167, 369, 400
AcuI CTGAAG 4 cut(s) 164, 190, 326, 705
AdeI CACNNNGTG 1 cut(s) 545
AfaI GTAC 4 cut(s) 112, 298, 1117, 1170
AfiI CCNNNNNNNGG 2 cut(s) 299, 1178
AflII CTTAAG 1 cut(s) 185
AgeI ACCGGT 1 cut(s) 1186
AhlI ACTAGT 1 cut(s) 95
AjnI CCWGG 1 cut(s) 292
AjuI GAANNNNNNNTTGG 2 cut(s) 207, 239
AluBI AGCT 5 cut(s) 160, 652, 971, 1112, 1197
AluI AGCT 5 cut(s) 160, 652, 971, 1112, 1197
Alw21I GWGCWC 1 cut(s) 964
Alw26I GTCTC 3 cut(s) 57, 877, 891
Alw44I GTGCAC 1 cut(s) 960
AlwI GGATC 3 cut(s) 17, 825, 1116
AoxI GGCC 3 cut(s) 209, 940, 1074
ApaLI GTGCAC 1 cut(s) 960
ApeKI GCWGC 6 cut(s) 160, 548, 737, 983, 990, 1109
ApoI RAATTY 3 cut(s) 167, 369, 400
ArsI GACNNNNNNTTYG 2 cut(s) 748, 780
AsiGI ACCGGT 1 cut(s) 1186
Asp700I GAANNNNTTC 2 cut(s) 219, 579
AspS9I GGNCC 5 cut(s) 81, 501, 519, 680, 1214
AsuC2I CCSGG 1 cut(s) 931
AsuHPI GGTGA 3 cut(s) 395, 701, 1239
AvaII GGWCC 5 cut(s) 81, 501, 519, 680, 1214
BaeGI GKGCMC 1 cut(s) 964
BalI TGGCCA 1 cut(s) 1076
BauI CACGAG 1 cut(s) 72
Bbv12I GWGCWC 1 cut(s) 964
BbvCI CCTCAGC 1 cut(s) 995
BbvI GCAGC 6 cut(s) 147, 535, 749, 970, 977, 1121
BccI CCATC 3 cut(s) 329, 402, 671
BceAI ACGGC 1 cut(s) 984
BcgI CGANNNNNNTGC 2 cut(s) 1094, 1128
BciT130I CCWGG 1 cut(s) 294
BclI TGATCA 1 cut(s) 436
BcnI CCSGG 1 cut(s) 931
BcoDI GTCTC 3 cut(s) 57, 877, 891
BcuI ACTAGT 1 cut(s) 95
BfaI CTAG 2 cut(s) 96, 198
BfmI CTRYAG 1 cut(s) 787
BfrI CTTAAG 1 cut(s) 185
BisI GCNGC 6 cut(s) 161, 549, 738, 984, 991, 1110
BlsI GCNGC 6 cut(s) 162, 550, 739, 985, 992, 1111
BmcAI AGTACT 1 cut(s) 112
Bme1390I CCNGG 2 cut(s) 294, 931
Bme18I GGWCC 5 cut(s) 81, 501, 519, 680, 1214
BmgT120I GGNCC 5 cut(s) 81, 501, 519, 680, 1214
BmiI GGNNCC 4 cut(s) 82, 503, 724, 1215
BmrFI CCNGG 2 cut(s) 294, 931
BmrI ACTGGG 1 cut(s) 309
BmuI ACTGGG 1 cut(s) 309
BplI GAGNNNNNCTC 2 cut(s) 789, 821
Bpu10I CCTNAGC 1 cut(s) 995
BpuEI CTTGAG 1 cut(s) 1049
BpuMI CCSGG 1 cut(s) 931
BsaI GGTCTC 1 cut(s) 57
BsaJI CCNNGG 4 cut(s) 515, 834, 929, 1172
BsaWI WCCGGW 1 cut(s) 1186
Bsc4I CCNNNNNNNGG 2 cut(s) 299, 1178
Bse118I RCCGGY 1 cut(s) 1186
Bse1I ACTGG 5 cut(s) 304, 763, 916, 984, 1077
BseBI CCWGG 1 cut(s) 294
BseDI CCNNGG 4 cut(s) 515, 834, 929, 1172
BseGI GGATG 3 cut(s) 116, 390, 394
BseLI CCNNNNNNNGG 2 cut(s) 299, 1178
BseMII CTCAG 3 cut(s) 170, 1009, 1253
BseNI ACTGG 5 cut(s) 304, 763, 916, 984, 1077
BseRI GAGGAG 2 cut(s) 281, 919
BseSI GKGCMC 1 cut(s) 964
BseXI GCAGC 6 cut(s) 147, 535, 749, 970, 977, 1121
Bsh1236I CGCG 3 cut(s) 469, 635, 712
BshFI GGCC 3 cut(s) 211, 942, 1076
BshTI ACCGGT 1 cut(s) 1186
BsiHKAI GWGCWC 1 cut(s) 964
BsiSI CCGG 3 cut(s) 212, 931, 1187
BslFI GGGAC 1 cut(s) 487
BslI CCNNNNNNNGG 2 cut(s) 299, 1178
BsmAI GTCTC 3 cut(s) 57, 877, 891
BsmFI GGGAC 1 cut(s) 487
BsmI GAATGC 1 cut(s) 1138
BsnI GGCC 3 cut(s) 211, 942, 1076
Bso31I GGTCTC 1 cut(s) 57
Bsp1286I GDGCHC 1 cut(s) 964
Bsp143I GATC 6 cut(s) 9, 58, 385, 436, 830, 1121
Bsp19I CCATGG 1 cut(s) 834
BspACI CCGC 5 cut(s) 26, 163, 467, 635, 988
BspANI GGCC 3 cut(s) 211, 942, 1076
BspCNI CTCAG 3 cut(s) 169, 1008, 1252
BspFNI CGCG 3 cut(s) 469, 635, 712
BspHI TCATGA 1 cut(s) 571
BspLI GGNNCC 4 cut(s) 82, 503, 724, 1215
BspPI GGATC 3 cut(s) 17, 825, 1116
BspTI CTTAAG 1 cut(s) 185
BspTNI GGTCTC 1 cut(s) 57
BsrFI RCCGGY 1 cut(s) 1186
BsrI ACTGG 5 cut(s) 304, 763, 916, 984, 1077
BssAI RCCGGY 1 cut(s) 1186
BssECI CCNNGG 4 cut(s) 515, 834, 929, 1172
BssMI GATC 6 cut(s) 9, 58, 385, 436, 830, 1121
BssSI CACGAG 1 cut(s) 72
BssT1I CCWWGG 2 cut(s) 515, 834
Bst2BI CACGAG 1 cut(s) 72
Bst2UI CCWGG 1 cut(s) 294
Bst4CI ACNGT 3 cut(s) 310, 602, 791
Bst6I CTCTTC 2 cut(s) 225, 516
BstAFI CTTAAG 1 cut(s) 185
BstAPI GCANNNNNTGC 1 cut(s) 545
BstC8I GCNNGC 3 cut(s) 363, 988, 1107
BstDEI CTNAG 4 cut(s) 156, 995, 1137, 1239
BstDSI CCRYGG 1 cut(s) 834
BstF5I GGATG 3 cut(s) 116, 390, 394
BstFNI CGCG 3 cut(s) 469, 635, 712
BstKTI GATC 6 cut(s) 12, 61, 388, 439, 833, 1124
BstMAI GTCTC 3 cut(s) 57, 877, 891
BstMBI GATC 6 cut(s) 9, 58, 385, 436, 830, 1121
BstMWI GCNNNNNNNGC 4 cut(s) 545, 968, 996, 1203
BstNI CCWGG 1 cut(s) 294
BstSCI CCNGG 2 cut(s) 292, 929
BstSFI CTRYAG 1 cut(s) 787
BstSLI GKGCMC 1 cut(s) 964
BstUI CGCG 3 cut(s) 469, 635, 712
BstV1I GCAGC 6 cut(s) 147, 535, 749, 970, 977, 1121
BstX2I RGATCY 3 cut(s) 9, 830, 1121
BstYI RGATCY 3 cut(s) 9, 830, 1121
BsuRI GGCC 3 cut(s) 211, 942, 1076
BtgI CCRYGG 1 cut(s) 834
BtsCI GGATG 3 cut(s) 116, 390, 394
BtsIMutI CAGTG 1 cut(s) 139
Cac8I GCNNGC 3 cut(s) 363, 988, 1107
CciI TCATGA 1 cut(s) 571
Cfr10I RCCGGY 1 cut(s) 1186
Cfr13I GGNCC 5 cut(s) 81, 501, 519, 680, 1214
CseI GACGC 1 cut(s) 641
Csp6I GTAC 4 cut(s) 111, 297, 1116, 1169
CspAI ACCGGT 1 cut(s) 1186
CviAII CATG 8 cut(s) 332, 572, 701, 718, 835, 1072, 1102, 1230
CviQI GTAC 4 cut(s) 111, 297, 1116, 1169
DdeI CTNAG 4 cut(s) 156, 995, 1137, 1239
DpnI GATC 6 cut(s) 11, 60, 387, 438, 832, 1123
DpnII GATC 6 cut(s) 9, 58, 385, 436, 830, 1121
DraIII CACNNNGTG 1 cut(s) 545
DrdI GACNNNNNNGTC 2 cut(s) 345, 703
DseDI GACNNNNNNGTC 2 cut(s) 345, 703
EaeI YGGCCR 1 cut(s) 1074
Eam1104I CTCTTC 2 cut(s) 225, 516
EarI CTCTTC 2 cut(s) 225, 516
Eco130I CCWWGG 2 cut(s) 515, 834
Eco31I GGTCTC 1 cut(s) 57
Eco47I GGWCC 5 cut(s) 81, 501, 519, 680, 1214
Eco57I CTGAAG 4 cut(s) 164, 190, 326, 705
EcoO109I RGGNCCY 3 cut(s) 81, 501, 1214
EcoRII CCWGG 1 cut(s) 292
EcoT14I CCWWGG 2 cut(s) 515, 834
ErhI CCWWGG 2 cut(s) 515, 834
FaeI CATG 8 cut(s) 335, 575, 704, 721, 838, 1075, 1105, 1233
FalI AAGNNNNNCTT 2 cut(s) 345, 377
FaqI GGGAC 1 cut(s) 487
FatI CATG 8 cut(s) 331, 571, 700, 717, 834, 1071, 1101, 1229
FauI CCCGC 1 cut(s) 995
FbaI TGATCA 1 cut(s) 436
FblI GTMKAC 2 cut(s) 707, 786
Fnu4HI GCNGC 6 cut(s) 161, 549, 738, 984, 991, 1110
FokI GGATG 3 cut(s) 103, 377, 381
Fsp4HI GCNGC 6 cut(s) 161, 549, 738, 984, 991, 1110
FspBI CTAG 2 cut(s) 96, 198
GluI GCNGC 6 cut(s) 161, 549, 738, 984, 991, 1110
HaeIII GGCC 3 cut(s) 211, 942, 1076
HapII CCGG 3 cut(s) 212, 931, 1187
HgaI GACGC 1 cut(s) 641
Hin1II CATG 8 cut(s) 335, 575, 704, 721, 838, 1075, 1105, 1233
HinfI GANTC 3 cut(s) 215, 697, 714
HpaII CCGG 3 cut(s) 212, 931, 1187
HphI GGTGA 3 cut(s) 395, 701, 1239
Hpy166II GTNNAC 3 cut(s) 708, 787, 962
Hpy188I TCNGA 4 cut(s) 441, 497, 658, 1242
Hpy188III TCNNGA 3 cut(s) 62, 572, 683
Hpy8I GTNNAC 3 cut(s) 708, 787, 962
HpyAV CCTTC 5 cut(s) 139, 492, 547, 680, 932
HpyCH4III ACNGT 3 cut(s) 310, 602, 791
HpyCH4V TGCA 4 cut(s) 539, 737, 962, 1105
HpyF10VI GCNNNNNNNGC 4 cut(s) 545, 968, 996, 1203
HpyF3I CTNAG 4 cut(s) 156, 995, 1137, 1239
Hsp92II CATG 8 cut(s) 335, 575, 704, 721, 838, 1075, 1105, 1233
Ksp22I TGATCA 1 cut(s) 436
Kzo9I GATC 6 cut(s) 9, 58, 385, 436, 830, 1121
LmnI GCTCC 2 cut(s) 286, 1194
Lsp1109I GCAGC 6 cut(s) 147, 535, 749, 970, 977, 1121
MaeI CTAG 2 cut(s) 96, 198
MaeIII GTNAC 3 cut(s) 347, 602, 1001
MalI GATC 6 cut(s) 11, 60, 387, 438, 832, 1123
MboI GATC 6 cut(s) 9, 58, 385, 436, 830, 1121
MboII GAAGA 9 cut(s) 30, 212, 443, 503, 560, 587, 837, 840, 1074
MflI RGATCY 3 cut(s) 9, 830, 1121
MhlI GDGCHC 1 cut(s) 964
MlsI TGGCCA 1 cut(s) 1076
MluCI AATT 6 cut(s) 167, 369, 400, 410, 534, 921
MluNI TGGCCA 1 cut(s) 1076
MlyI GAGTC 2 cut(s) 691, 723
MmeI TCCRAC 2 cut(s) 1000, 1149
Mox20I TGGCCA 1 cut(s) 1076
MroXI GAANNNNTTC 2 cut(s) 219, 579
MscI TGGCCA 1 cut(s) 1076
MseI TTAA 4 cut(s) 177, 186, 318, 920
MslI CAYNNNNRTG 1 cut(s) 527
Msp20I TGGCCA 1 cut(s) 1076
MspA1I CMGCKG 3 cut(s) 26, 160, 990
MspCI CTTAAG 1 cut(s) 185
MspI CCGG 3 cut(s) 212, 931, 1187
MspR9I CCNGG 2 cut(s) 294, 931
Mva1269I GAATGC 1 cut(s) 1138
MvaI CCWGG 1 cut(s) 294
MvnI CGCG 3 cut(s) 469, 635, 712
MwoI GCNNNNNNNGC 4 cut(s) 545, 968, 996, 1203
NciI CCSGG 1 cut(s) 931
NcoI CCATGG 1 cut(s) 834
NdeII GATC 6 cut(s) 9, 58, 385, 436, 830, 1121
NlaIII CATG 8 cut(s) 335, 575, 704, 721, 838, 1075, 1105, 1233
NlaIV GGNNCC 4 cut(s) 82, 503, 724, 1215
NmuCI GTSAC 3 cut(s) 347, 602, 1001
PagI TCATGA 1 cut(s) 571
PctI GAATGC 1 cut(s) 1138
PdmI GAANNNNTTC 2 cut(s) 219, 579
PfeI GAWTC 1 cut(s) 215
PinAI ACCGGT 1 cut(s) 1186
PkrI GCNGC 6 cut(s) 162, 550, 739, 985, 992, 1111
PleI GAGTC 2 cut(s) 691, 722
PpsI GAGTC 2 cut(s) 691, 722
PpuMI RGGWCCY 3 cut(s) 81, 501, 1214
Psp5II RGGWCCY 3 cut(s) 81, 501, 1214
Psp6I CCWGG 1 cut(s) 292
PspGI CCWGG 1 cut(s) 292
PspN4I GGNNCC 4 cut(s) 82, 503, 724, 1215
PspPI GGNCC 5 cut(s) 81, 501, 519, 680, 1214
PspPPI RGGWCCY 3 cut(s) 81, 501, 1214
PsuI RGATCY 3 cut(s) 9, 830, 1121
PvuII CAGCTG 1 cut(s) 160
RsaI GTAC 4 cut(s) 112, 298, 1117, 1170
RsaNI GTAC 4 cut(s) 111, 297, 1116, 1169
RseI CAYNNNNRTG 1 cut(s) 527
SaqAI TTAA 4 cut(s) 177, 186, 318, 920
SatI GCNGC 6 cut(s) 161, 549, 738, 984, 991, 1110
Sau3AI GATC 6 cut(s) 9, 58, 385, 436, 830, 1121
Sau96I GGNCC 5 cut(s) 81, 501, 519, 680, 1214
ScaI AGTACT 1 cut(s) 112
SchI GAGTC 2 cut(s) 691, 723
ScrFI CCNGG 2 cut(s) 294, 931
SduI GDGCHC 1 cut(s) 964
SfcI CTRYAG 1 cut(s) 787
SinI GGWCC 5 cut(s) 81, 501, 519, 680, 1214
SmiMI CAYNNNNRTG 1 cut(s) 527
SmlI CTYRAG 2 cut(s) 185, 1064
SmoI CTYRAG 2 cut(s) 185, 1064
SpeI ACTAGT 1 cut(s) 95
Sse9I AATT 6 cut(s) 167, 369, 400, 410, 534, 921
SsiI CCGC 5 cut(s) 26, 163, 467, 635, 988
SspMI CTAG 2 cut(s) 96, 198
StyD4I CCNGG 2 cut(s) 292, 929
StyI CCWWGG 2 cut(s) 515, 834
TaaI ACNGT 3 cut(s) 310, 602, 791
TaqI TCGA 3 cut(s) 61, 936, 1262
TasI AATT 6 cut(s) 167, 369, 400, 410, 534, 921
TatI WGTACW 1 cut(s) 110
TfiI GAWTC 1 cut(s) 215
Tru1I TTAA 4 cut(s) 177, 186, 318, 920
Tru9I TTAA 4 cut(s) 177, 186, 318, 920
TscAI CASTG 1 cut(s) 139
TseFI GTSAC 3 cut(s) 347, 602, 1001
TseI GCWGC 6 cut(s) 160, 548, 737, 983, 990, 1109
Tsp45I GTSAC 3 cut(s) 347, 602, 1001
TspDTI ATGAA 4 cut(s) 60, 545, 560, 588
TspRI CASTG 1 cut(s) 139
Vha464I CTTAAG 1 cut(s) 185
VneI GTGCAC 1 cut(s) 960
VpaK11BI GGWCC 5 cut(s) 81, 501, 519, 680, 1214
XapI RAATTY 3 cut(s) 167, 369, 400
XmiI GTMKAC 2 cut(s) 707, 786
XmnI GAANNNNTTC 2 cut(s) 219, 579
XspI CTAG 2 cut(s) 96, 198
ZrmI AGTACT 1 cut(s) 112
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.