AT5G10770

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Reverse (-)
3403021 .. 3405571
2551 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G10770.1

Sequence Viewer

Length: 1425 bp
ATGAGCATAAATAGGAATCTGTTGAATATCATAATAATCCTTTGTATATGTCTCAATTTGGGTTGTAACGATGGAGCTCAAGAAAGAGAGACTGATTCTCATACTATCCAAGTCAGCTCTCTCCTCCCTTCATCATCATCATCTTGTGTTCTTTCTCCCAGAGCGTCTACTACAAAGTCTTCACTGCACGTGACGCATAGACACGGCACGTGTTCGCGTCTAAACAATGGCAAGGCCACGAGTCCAGACCATGTCGAGATCCTAAGACTCGACCAGGCTCGCGTAAACTCAATCCACTCAAAACTATCGAAGAAACTCGCAACAGATCACGTCAGTGAAAGCAAGTCAACGGATCTACCGGCTAAAGACGGAAGCACACTCGGTTCAGGTAACTACATCGTGACGGTCGGCCTCGGGACACCAAAGAACGATCTATCACTAATCTTCGACACTGGAAGCGATTTAACGTGGACTCAGTGTCAGCCATGTGTTCGAACTTGCTATGACCAGAAGGAACCAATCTTTAACCCTTCTAAGTCTACTTCTTACTACAACGTATCCTGCTCATCGGCTGCGTGTGGTTCTCTCTCTTCTGCTACAGGAAACGCCGGAAGCTGTTCGGCTTCGAATTGCATCTACGGTATTCAATACGGCGATCAATCGTTCTCCGTCGGATTTCTCGCCAAGGAGAAGTTTACACTAACGAACTCCGACGTATTTGACGGCGTTTATTTCGGTTGCGGCGAGAACAACCAAGGACTTTTCACCGGTGTCGCCGGACTTCTCGGTCTTGGTCGTGACAAGCTTTCGTTTCCGTCGCAGACGGCAACGGCTTACAATAAGATCTTCTCTTACTGCCTCCCTTCCTCCGCTAGCTACACCGGACATCTCACATTCGGATCCGCCGGAATCTCCAGATCCGTTAAATTCACACCAATTTCAACCATCACTGATGGAACTTCCTTCTACGGCCTTAATATCGTCGCAATCACCGTCGGCGGTCAGAAATTGCCGATTCCTTCAACTGTATTCTCTACTCCGGGAGCTTTAATCGATTCCGGCACCGTTATCACTCGTCTCCCGCCGAAAGCCTACGCGGCGTTAAGAAGCTCGTTCAAGGCGAAGATGTCAAAGTATCCGACCACGTCGGGCGTCTCGATCTTGGACACGTGTTTCGATCTCAGCGGGTTTAAGACGGTGACTATCCCGAAAGTGGCGTTCTCTTTCAGCGGTGGCGCCGTCGTGGAGCTTGGTTCGAAAGGGATATTTTACGTGTTTAAGATATCTCAGGTTTGTCTGGCGTTTGCAGGGAATAGCGATGACAGTAACGCTGCCATCTTTGGAAACGTTCAGCAGCAAACGCTAGAAGTTGTGTATGATGGTGCGGGTGGGCGGGTCGGGTTTGCTCCAAACGGGTGTAGTTAA

Protein Analysis

474

Amino Acids

49.86

Weight (kDa)

8.48

Isoelectric Point (pI)

33.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 131 - 470 6.5e-22 Eukaryotic aspartyl protease
TAXi_N PF14543 132 - 301 1.4e-54 Xylanase inhibitor N-terminal
TAXi_C PF14541 323 - 469 8.7e-27 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 786
AccB1I GGYRCC 2 cut(s) 1061, 1235
AccI GTMKAC 2 cut(s) 167, 539
AccII CGCG 3 cut(s) 217, 282, 1097
AclI AACGTT 1 cut(s) 1347
AclWI GGATC 5 cut(s) 253, 360, 894, 907, 912
AcsI RAATTY 1 cut(s) 926
AcvI CACGTG 3 cut(s) 190, 210, 1170
AcyI GRCGYC 2 cut(s) 1152, 1236
AfiI CCNNNNNNNGG 1 cut(s) 1213
AflIII ACRYGT 4 cut(s) 209, 1167, 1169, 1272
AgeI ACCGGT 1 cut(s) 767
AgsI TTSAA 5 cut(s) 25, 647, 942, 1023, 1117
AhdI GACNNNNNGTC 1 cut(s) 477
AjiI CACGTC 2 cut(s) 331, 1146
AjnI CCWGG 1 cut(s) 273
AleI CACNNNNGTG 1 cut(s) 333
AluBI AGCT 8 cut(s) 77, 117, 615, 805, 876, 1046, 1110, 1249
AluI AGCT 8 cut(s) 77, 117, 615, 805, 876, 1046, 1110, 1249
Alw21I GWGCWC 1 cut(s) 79
Alw26I GTCTC 4 cut(s) 56, 83, 1082, 1159
AlwI GGATC 5 cut(s) 253, 360, 894, 907, 912
Ama87I CYCGRG 1 cut(s) 413
AoxI GGCC 3 cut(s) 234, 409, 970
ApeKI GCWGC 3 cut(s) 572, 1331, 1354
ApoI RAATTY 1 cut(s) 926
ArsI GACNNNNNNTTYG 2 cut(s) 1157, 1189
AsiGI ACCGGT 1 cut(s) 767
Asp700I GAANNNNTTC 1 cut(s) 616
AspLEI GCGC 1 cut(s) 1238
AsuC2I CCSGG 1 cut(s) 1041
AsuHPI GGTGA 3 cut(s) 757, 982, 1210
AsuII TTCGAA 3 cut(s) 493, 626, 1256
AsuNHI GCTAGC 1 cut(s) 872
AvaI CYCGRG 1 cut(s) 413
BamHI GGATCC 1 cut(s) 899
BanI GGYRCC 2 cut(s) 1061, 1235
BanII GRGCYC 1 cut(s) 79
BauI CACGAG 1 cut(s) 238
BbrPI CACGTG 3 cut(s) 190, 210, 1170
BbsI GAAGAC 1 cut(s) 171
Bbv12I GWGCWC 1 cut(s) 79
BbvI GCAGC 3 cut(s) 559, 1318, 1366
BccI CCATC 5 cut(s) 65, 947, 953, 1343, 1373
BceAI ACGGC 7 cut(s) 220, 667, 739, 840, 846, 985, 1223
BciT130I CCWGG 1 cut(s) 275
BciVI GTATCC 2 cut(s) 568, 1146
BcnI CCSGG 1 cut(s) 1041
BcoDI GTCTC 4 cut(s) 56, 83, 1082, 1159
BfaI CTAG 2 cut(s) 873, 1364
BfmI CTRYAG 1 cut(s) 597
BfoI RGCGCY 1 cut(s) 1239
BfuI GTATCC 2 cut(s) 568, 1146
BglI GCCNNNNNGGC 1 cut(s) 1097
BglII AGATCT 1 cut(s) 843
BisI GCNGC 5 cut(s) 573, 742, 1098, 1332, 1355
BlsI GCNGC 5 cut(s) 574, 743, 1099, 1333, 1356
Bme1390I CCNGG 2 cut(s) 275, 1041
BmeRI GACNNNNNGTC 1 cut(s) 477
BmeT110I CYCGRG 1 cut(s) 413
BmgBI CACGTC 2 cut(s) 331, 1146
BmiI GGNNCC 4 cut(s) 516, 901, 1063, 1237
BmrFI CCNGG 2 cut(s) 275, 1041
BmsI GCATC 1 cut(s) 642
BmtI GCTAGC 1 cut(s) 876
BpiI GAAGAC 1 cut(s) 171
BpmI CTGGAG 1 cut(s) 898
Bpu14I TTCGAA 3 cut(s) 493, 626, 1256
BpuEI CTTGAG 1 cut(s) 63
BpuMI CCSGG 1 cut(s) 1041
Bsa29I ATCGAT 1 cut(s) 1053
BsaAI YACGTR 4 cut(s) 190, 210, 1170, 1273
BsaHI GRCGYC 2 cut(s) 1152, 1236
BsaJI CCNNGG 3 cut(s) 412, 684, 754
BsaWI WCCGGW 2 cut(s) 767, 881
Bsc4I CCNNNNNNNGG 1 cut(s) 1213
Bse118I RCCGGY 2 cut(s) 358, 767
Bse1I ACTGG 1 cut(s) 457
BseBI CCWGG 1 cut(s) 275
BseCI ATCGAT 1 cut(s) 1053
BseDI CCNNGG 3 cut(s) 412, 684, 754
BseLI CCNNNNNNNGG 1 cut(s) 1213
BseMII CTCAG 3 cut(s) 488, 1195, 1301
BseNI ACTGG 1 cut(s) 457
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 3 cut(s) 559, 1318, 1366
BsgI GTGCAG 1 cut(s) 170
Bsh1236I CGCG 3 cut(s) 217, 282, 1097
Bsh1285I CGRYCG 1 cut(s) 408
BshFI GGCC 3 cut(s) 236, 411, 972
BshNI GGYRCC 2 cut(s) 1061, 1235
BshTI ACCGGT 1 cut(s) 767
BshVI ATCGAT 1 cut(s) 1053
BsiEI CGRYCG 1 cut(s) 408
BsiHKAI GWGCWC 1 cut(s) 79
BsiHKCI CYCGRG 1 cut(s) 413
BsiSI CCGG 8 cut(s) 359, 609, 768, 777, 882, 906, 1040, 1059
BslFI GGGAC 1 cut(s) 430
BslI CCNNNNNNNGG 1 cut(s) 1213
BsmAI GTCTC 4 cut(s) 56, 83, 1082, 1159
BsmBI CGTCTC 2 cut(s) 1082, 1159
BsmFI GGGAC 1 cut(s) 430
BsnI GGCC 3 cut(s) 236, 411, 972
BsoBI CYCGRG 1 cut(s) 413
Bsp119I TTCGAA 3 cut(s) 493, 626, 1256
Bsp1286I GDGCHC 1 cut(s) 79
BspANI GGCC 3 cut(s) 236, 411, 972
BspCNI CTCAG 3 cut(s) 487, 1194, 1300
BspDI ATCGAT 1 cut(s) 1053
BspFNI CGCG 3 cut(s) 217, 282, 1097
BspLI GGNNCC 4 cut(s) 516, 901, 1063, 1237
BspOI GCTAGC 1 cut(s) 876
BspPI GGATC 5 cut(s) 253, 360, 894, 907, 912
BspT104I TTCGAA 3 cut(s) 493, 626, 1256
BspT107I GGYRCC 2 cut(s) 1061, 1235
BsrFI RCCGGY 2 cut(s) 358, 767
BsrI ACTGG 1 cut(s) 457
BssAI RCCGGY 2 cut(s) 358, 767
BssECI CCNNGG 3 cut(s) 412, 684, 754
BssNI GRCGYC 2 cut(s) 1152, 1236
BssSI CACGAG 1 cut(s) 238
BssT1I CCWWGG 2 cut(s) 684, 754
Bst2BI CACGAG 1 cut(s) 238
Bst2UI CCWGG 1 cut(s) 275
Bst4CI ACNGT 7 cut(s) 406, 641, 994, 1027, 1066, 1198, 1325
Bst6I CTCTTC 1 cut(s) 595
BstACI GRCGYC 2 cut(s) 1152, 1236
BstBAI YACGTR 4 cut(s) 190, 210, 1170, 1273
BstBI TTCGAA 3 cut(s) 493, 626, 1256
BstC8I GCNNGC 2 cut(s) 280, 874
BstDEI CTNAG 5 cut(s) 263, 474, 534, 1181, 1287
BstFNI CGCG 3 cut(s) 217, 282, 1097
BstH2I RGCGCY 1 cut(s) 1239
BstHHI GCGC 1 cut(s) 1238
BstMAI GTCTC 4 cut(s) 56, 83, 1082, 1159
BstMCI CGRYCG 1 cut(s) 408
BstMWI GCNNNNNNNGC 3 cut(s) 193, 1097, 1360
BstNI CCWGG 1 cut(s) 275
BstSCI CCNGG 2 cut(s) 273, 1039
BstSFI CTRYAG 1 cut(s) 597
BstUI CGCG 3 cut(s) 217, 282, 1097
BstV1I GCAGC 3 cut(s) 559, 1318, 1366
BstV2I GAAGAC 1 cut(s) 171
BstX2I RGATCY 5 cut(s) 258, 352, 843, 899, 917
BstYI RGATCY 5 cut(s) 258, 352, 843, 899, 917
Bsu15I ATCGAT 1 cut(s) 1053
BsuI GTATCC 2 cut(s) 568, 1146
BsuRI GGCC 3 cut(s) 236, 411, 972
BsuTUI ATCGAT 1 cut(s) 1053
BtgZI GCGATG 1 cut(s) 1332
BtrI CACGTC 2 cut(s) 331, 1146
BtsI GCAGTG 1 cut(s) 182
BtsIMutI CAGTG 5 cut(s) 182, 340, 450, 482, 948
Cac8I GCNNGC 2 cut(s) 280, 874
CfoI GCGC 1 cut(s) 1238
Cfr10I RCCGGY 2 cut(s) 358, 767
ClaI ATCGAT 1 cut(s) 1053
CseI GACGC 4 cut(s) 153, 202, 206, 1141
CspAI ACCGGT 1 cut(s) 767
CviAII CATG 2 cut(s) 251, 486
DdeI CTNAG 5 cut(s) 263, 474, 534, 1181, 1287
DinI GGCGCC 1 cut(s) 1237
DrdI GACNNNNNNGTC 1 cut(s) 786
DriI GACNNNNNGTC 1 cut(s) 477
DseDI GACNNNNNNGTC 1 cut(s) 786
Eam1104I CTCTTC 1 cut(s) 595
Eam1105I GACNNNNNGTC 1 cut(s) 477
EarI CTCTTC 1 cut(s) 595
EciI GGCGGA 1 cut(s) 892
Ecl136II GAGCTC 1 cut(s) 77
Eco130I CCWWGG 2 cut(s) 684, 754
Eco24I GRGCYC 1 cut(s) 79
Eco32I GATATC 1 cut(s) 1284
Eco53kI GAGCTC 1 cut(s) 77
Eco72I CACGTG 3 cut(s) 190, 210, 1170
Eco88I CYCGRG 1 cut(s) 413
EcoICRI GAGCTC 1 cut(s) 77
EcoRII CCWGG 1 cut(s) 273
EcoRV GATATC 1 cut(s) 1284
EcoT14I CCWWGG 2 cut(s) 684, 754
EcoT38I GRGCYC 1 cut(s) 79
EgeI GGCGCC 1 cut(s) 1237
EheI GGCGCC 1 cut(s) 1237
ErhI CCWWGG 2 cut(s) 684, 754
Esp3I CGTCTC 2 cut(s) 1082, 1159
FaeI CATG 2 cut(s) 254, 489
FaqI GGGAC 1 cut(s) 430
FatI CATG 2 cut(s) 250, 485
FauI CCCGC 4 cut(s) 1089, 1178, 1378, 1386
FblI GTMKAC 2 cut(s) 167, 539
Fnu4HI GCNGC 5 cut(s) 573, 742, 1098, 1332, 1355
FriOI GRGCYC 1 cut(s) 79
Fsp4HI GCNGC 5 cut(s) 573, 742, 1098, 1332, 1355
FspBI CTAG 2 cut(s) 873, 1364
GlaI GCGC 1 cut(s) 1237
GluI GCNGC 5 cut(s) 573, 742, 1098, 1332, 1355
GsuI CTGGAG 1 cut(s) 898
HaeII RGCGCY 1 cut(s) 1239
HaeIII GGCC 3 cut(s) 236, 411, 972
HapII CCGG 8 cut(s) 359, 609, 768, 777, 882, 906, 1040, 1059
HgaI GACGC 4 cut(s) 153, 202, 206, 1141
HhaI GCGC 1 cut(s) 1238
Hin1I GRCGYC 2 cut(s) 1152, 1236
Hin1II CATG 2 cut(s) 254, 489
Hin6I GCGC 1 cut(s) 1236
HinP1I GCGC 1 cut(s) 1236
HincII GTYRAC 1 cut(s) 348
HindII GTYRAC 1 cut(s) 348
HindIII AAGCTT 1 cut(s) 803
HinfI GANTC 8 cut(s) 16, 95, 241, 267, 472, 909, 1015, 1055
HpaII CCGG 8 cut(s) 359, 609, 768, 777, 882, 906, 1040, 1059
HphI GGTGA 3 cut(s) 757, 982, 1210
Hpy166II GTNNAC 6 cut(s) 168, 286, 348, 471, 540, 696
Hpy188I TCNGA 5 cut(s) 674, 712, 899, 1005, 1140
Hpy188III TCNNGA 9 cut(s) 80, 245, 256, 400, 415, 797, 915, 1156, 1207
Hpy8I GTNNAC 6 cut(s) 168, 286, 348, 471, 540, 696
Hpy99I CGWCG 7 cut(s) 674, 716, 820, 986, 998, 1150, 1244
HpyAV CCTTC 6 cut(s) 138, 505, 540, 873, 973, 1029
HpyCH4III ACNGT 7 cut(s) 406, 641, 994, 1027, 1066, 1198, 1325
HpyCH4V TGCA 3 cut(s) 187, 633, 1307
HpyF10VI GCNNNNNNNGC 3 cut(s) 193, 1097, 1360
HpyF3I CTNAG 5 cut(s) 263, 474, 534, 1181, 1287
Hsp92I GRCGYC 2 cut(s) 1152, 1236
Hsp92II CATG 2 cut(s) 254, 489
HspAI GCGC 1 cut(s) 1236
KasI GGCGCC 1 cut(s) 1235
LmnI GCTCC 4 cut(s) 74, 1043, 1246, 1411
Lsp1109I GCAGC 3 cut(s) 559, 1318, 1366
LweI GCATC 1 cut(s) 642
MaeI CTAG 2 cut(s) 873, 1364
MaeIII GTNAC 7 cut(s) 65, 190, 389, 400, 797, 1198, 1325
MboII GAAGA 6 cut(s) 171, 322, 436, 582, 838, 1135
MflI RGATCY 5 cut(s) 258, 352, 843, 899, 917
MhlI GDGCHC 1 cut(s) 79
MluCI AATT 5 cut(s) 55, 628, 926, 936, 1007
Mly113I GGCGCC 1 cut(s) 1236
MlyI GAGTC 3 cut(s) 250, 261, 466
MmeI TCCRAC 3 cut(s) 652, 735, 1163
MnlI CCTC 4 cut(s) 134, 422, 869, 877
MroXI GAANNNNTTC 1 cut(s) 616
MseI TTAA 9 cut(s) 464, 525, 924, 975, 1049, 1103, 1191, 1278, 1423
MslI CAYNNNNRTG 1 cut(s) 333
MspA1I CMGCKG 2 cut(s) 1185, 1230
MspI CCGG 8 cut(s) 359, 609, 768, 777, 882, 906, 1040, 1059
MspR9I CCNGG 2 cut(s) 275, 1041
MvaI CCWGG 1 cut(s) 275
MvnI CGCG 3 cut(s) 217, 282, 1097
MwoI GCNNNNNNNGC 3 cut(s) 193, 1097, 1360
NarI GGCGCC 1 cut(s) 1236
NciI CCSGG 1 cut(s) 1041
NheI GCTAGC 1 cut(s) 872
NlaIII CATG 2 cut(s) 254, 489
NlaIV GGNNCC 4 cut(s) 516, 901, 1063, 1237
NmuCI GTSAC 4 cut(s) 190, 400, 797, 1198
NspV TTCGAA 3 cut(s) 493, 626, 1256
OliI CACNNNNGTG 1 cut(s) 333
PcsI WCGNNNNNNNCGW 4 cut(s) 741, 990, 1118, 1154
PdmI GAANNNNTTC 1 cut(s) 616
PfeI GAWTC 5 cut(s) 16, 95, 909, 1015, 1055
PflFI GACNNNGTC 2 cut(s) 251, 1144
PfoI TCCNGGA 1 cut(s) 1039
PinAI ACCGGT 1 cut(s) 767
PkrI GCNGC 5 cut(s) 574, 743, 1099, 1333, 1356
PleI GAGTC 3 cut(s) 249, 261, 466
PluTI GGCGCC 1 cut(s) 1239
PmaCI CACGTG 3 cut(s) 190, 210, 1170
PmlI CACGTG 3 cut(s) 190, 210, 1170
PpsI GAGTC 3 cut(s) 249, 261, 466
Ppu21I YACGTR 4 cut(s) 190, 210, 1170, 1273
Psp124BI GAGCTC 1 cut(s) 79
Psp1406I AACGTT 1 cut(s) 1347
Psp6I CCWGG 1 cut(s) 273
PspCI CACGTG 3 cut(s) 190, 210, 1170
PspGI CCWGG 1 cut(s) 273
PspN4I GGNNCC 4 cut(s) 516, 901, 1063, 1237
PsuI RGATCY 5 cut(s) 258, 352, 843, 899, 917
PsyI GACNNNGTC 2 cut(s) 251, 1144
RseI CAYNNNNRTG 1 cut(s) 333
SacI GAGCTC 1 cut(s) 79
SaqAI TTAA 9 cut(s) 464, 525, 924, 975, 1049, 1103, 1191, 1278, 1423
SatI GCNGC 5 cut(s) 573, 742, 1098, 1332, 1355
SchI GAGTC 3 cut(s) 250, 261, 466
ScrFI CCNGG 2 cut(s) 275, 1041
SduI GDGCHC 1 cut(s) 79
SfaNI GCATC 1 cut(s) 642
SfcI CTRYAG 1 cut(s) 597
SfoI GGCGCC 1 cut(s) 1237
SfuI TTCGAA 3 cut(s) 493, 626, 1256
SgrAI CRCCGGYG 1 cut(s) 767
SmiMI CAYNNNNRTG 1 cut(s) 333
SmlI CTYRAG 1 cut(s) 78
SmoI CTYRAG 1 cut(s) 78
Sse9I AATT 5 cut(s) 55, 628, 926, 936, 1007
SspDI GGCGCC 1 cut(s) 1235
SspMI CTAG 2 cut(s) 873, 1364
SstI GAGCTC 1 cut(s) 79
StyD4I CCNGG 2 cut(s) 273, 1039
StyI CCWWGG 2 cut(s) 684, 754
TaaI ACNGT 7 cut(s) 406, 641, 994, 1027, 1066, 1198, 1325
TaqII GACCGA 1 cut(s) 776
TasI AATT 5 cut(s) 55, 628, 926, 936, 1007
TauI GCSGC 2 cut(s) 744, 1100
TfiI GAWTC 5 cut(s) 16, 95, 909, 1015, 1055
Tru1I TTAA 9 cut(s) 464, 525, 924, 975, 1049, 1103, 1191, 1278, 1423
Tru9I TTAA 9 cut(s) 464, 525, 924, 975, 1049, 1103, 1191, 1278, 1423
TscAI CASTG 5 cut(s) 189, 340, 457, 482, 955
TseFI GTSAC 4 cut(s) 190, 400, 797, 1198
TseI GCWGC 3 cut(s) 572, 1331, 1354
Tsp45I GTSAC 4 cut(s) 190, 400, 797, 1198
TspDTI ATGAA 1 cut(s) 120
TspGWI ACGGA 5 cut(s) 365, 384, 658, 804, 910
TspRI CASTG 5 cut(s) 189, 340, 457, 482, 955
Tth111I GACNNNGTC 2 cut(s) 251, 1144
XapI RAATTY 1 cut(s) 926
XmiI GTMKAC 2 cut(s) 167, 539
XmnI GAANNNNTTC 1 cut(s) 616
XspI CTAG 2 cut(s) 873, 1364
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.