MD15G1044000.v1.1

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000845
Physical Location & Seq
Forward (+)
3039898 .. 3043735
3838 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1044000.v1.1.491

Sequence Viewer

Length: 1515 bp
ATGGCGGCAACTCCCAGTTTTTCTAGCTCCTCCTCCTCCTCCTCCTCCCTCATGAGCTATTTGCTTGGCTTTTCTGTATTTCTAACCCTATTTCTCAGCTCTTTGGAGAAGGGCTTTGCCGTGGAAGAAAACCAGCTTCTCCATCAACATGCTCATACAGTTGAACTCAATTCTCTGCTGCCAGCAACCTCCTGCAGCCCTAGCTCCTCCGCCAAAGGTCACGACAACAAGGAACCAACGTCATCATCGACCGTACTGAAAGTGGTACACAAGCACGGACCATGCTCTGGAATCAAGAAGAACAAATCCAAAATTCCAACCCACGCTCAAATCCTCAACCAAGACCAAGCCCGAGTCGACTCAATCCACTCCCGAGTCAACACCAAGAAATCACCGTCCGCAGCCACCGTCGACAAACTCCGCCCATCCGCCGATACCAAAATCCCAGCCCAGTCCGGAAGCGTAGTGGGCTCAGGCAACTACATTGTCAGCGTGGGCCTGGGCTCGCCCAAGAAGATGCTCTCCCTCATCTTCGACACGGGGAGTGATCTGACGTGGACCCAATGCCGTCCATGTGCTAAATCATGTTACAAACAGAAGGAGCCAATCTTCGACCCCGCAACATCATCCTCATACGTCAACATCTCTTGTAGCTCCGCCACGTGTTCCGAACTGGTGTCAGGCACTGGAAACACTCCCGGCTGCGCCTCCTCCACCTGCGTCTACGGCATTCAGTACGGAGACCAGTCATTCTCCGTCGGATTTTTCGGGAAGGAACGGCTGAGCTTAACGCCGACGGATATTTTTGACGGGTTTTTGTTCGGTTGCGGCCAGAACAATCAGGGACTCTTCGGAGGCGCCGCCGGTTTGCTCGGTCTCGGCCGGGATAAAATCTCCATCATCGAGCAATCCGCCTTGAAATACAACCGGTTCTTCTCCTACTGCCTCCCCTCCAAATCCAGCGGCACTGGATACCTCAGCTTCGGCAAAGGCGGCGGATCTTCCGGCGCCGTGAAATTCACACCCCTCTCCGACGTCTCCCAAGGCGGGTCGTTTTACGGCCTCGACGTCGTCGGGATCAGCGTTGGCGGGAAAAAATTACCGATTTCCGGTACAATTTTTTCCTCCTCGGGGACGATTATAGATTCCGGGACAGTGATCACGCGCCTGCCGCCGACAGCATACAAGGCACTGCGCGACGCGTTTCAGCAGGGGATGAAGAGCTACCCGTCAGCTCCGGCGCTTTCGATTCTCGACACTTGTTACGACTTCAGTAACGCCGATACGGTGACGTTTCCGAAAATTTCGTTTGAGTTCGGCGGCAGAACGACGTTGGAATTGGACCCGACCGGGATATTCTACGCGGCAAGTGCCGATCAAGTTTGCCTGGCGTTTGCCGCAAACGGTGACGACAGCGACATAGGGATATTTGGGAACGTTCAGCAGAAGAGGGTGCAGGTGGTTTATGATGTGGCTGGTGGAAAAATCGGATTTGCCCCTGCAGGATGCCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

505

Amino Acids

52.74

Weight (kDa)

8.53

Isoelectric Point (pI)

38.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 160 - 501 1.8e-24 Eukaryotic aspartyl protease
TAXi_N PF14543 161 - 330 5.3e-53 Xylanase inhibitor N-terminal
TAXi_C PF14541 353 - 499 1.5e-30 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 725, 1447
AatII GACGTC 2 cut(s) 1038, 1071
Acc36I ACCTGC 2 cut(s) 725, 1447
AccB1I GGYRCC 2 cut(s) 857, 1007
AccB7I CCANNNNNTGG 1 cut(s) 287
AccI GTMKAC 3 cut(s) 357, 411, 723
AccII CGCG 4 cut(s) 1165, 1197, 1202, 1364
AccIII TCCGGA 1 cut(s) 455
AclI AACGTT 1 cut(s) 1437
AclWI GGATC 2 cut(s) 1006, 1085
AcoI YGGCCR 2 cut(s) 829, 880
AcsI RAATTY 3 cut(s) 312, 1016, 1302
AcuI CTGAAG 1 cut(s) 1255
AcvI CACGTG 1 cut(s) 663
AcyI GRCGYC 4 cut(s) 858, 1008, 1035, 1068
AfaI GTAC 4 cut(s) 255, 267, 737, 1114
AfiI CCNNNNNNNGG 4 cut(s) 287, 1047, 1109, 1131
AflIII ACRYGT 2 cut(s) 662, 1200
AgeI ACCGGT 1 cut(s) 927
AgsI TTSAA 2 cut(s) 164, 919
AjiI CACGTC 1 cut(s) 555
AjnI CCWGG 2 cut(s) 498, 1386
Alw26I GTCTC 3 cut(s) 735, 881, 1042
AlwI GGATC 2 cut(s) 1006, 1085
AlwNI CAGNNNCTG 1 cut(s) 686
Ama87I CYCGRG 3 cut(s) 351, 372, 1129
Aor13HI TCCGGA 1 cut(s) 455
AoxI GGCC 4 cut(s) 496, 829, 880, 1060
ApeKI GCWGC 4 cut(s) 178, 195, 401, 702
ApoI RAATTY 3 cut(s) 312, 1016, 1302
AsiGI ACCGGT 1 cut(s) 927
AspLEI GCGC 6 cut(s) 707, 860, 1010, 1167, 1197, 1243
AspS9I GGNCC 4 cut(s) 278, 496, 558, 1342
AsuC2I CCSGG 4 cut(s) 699, 884, 1150, 1351
AsuHPI GGTGA 3 cut(s) 384, 1300, 1418
AvaI CYCGRG 3 cut(s) 351, 372, 1129
AvaII GGWCC 3 cut(s) 278, 558, 1342
BanI GGYRCC 2 cut(s) 857, 1007
BanII GRGCYC 2 cut(s) 473, 506
BbrPI CACGTG 1 cut(s) 663
BbvCI CCTCAGC 1 cut(s) 977
BbvI GCAGC 4 cut(s) 165, 207, 413, 689
BccI CCATC 3 cut(s) 150, 433, 905
BceAI ACGGC 6 cut(s) 104, 552, 742, 794, 995, 1075
BciT130I CCWGG 2 cut(s) 500, 1388
BciVI GTATCC 1 cut(s) 965
BclI TGATCA 1 cut(s) 1158
BcnI CCSGG 4 cut(s) 699, 884, 1150, 1351
BcoDI GTCTC 3 cut(s) 735, 881, 1042
BfaI CTAG 2 cut(s) 24, 201
BfmI CTRYAG 2 cut(s) 193, 1500
BfoI RGCGCY 3 cut(s) 861, 1011, 1244
BfuAI ACCTGC 2 cut(s) 725, 1447
BfuI GTATCC 1 cut(s) 965
BlpI GCTNAGC 1 cut(s) 782
Bme1390I CCNGG 6 cut(s) 500, 699, 884, 1150, 1351, 1388
Bme18I GGWCC 3 cut(s) 278, 558, 1342
BmeT110I CYCGRG 3 cut(s) 351, 372, 1129
BmgBI CACGTC 1 cut(s) 555
BmgT120I GGNCC 4 cut(s) 278, 496, 558, 1342
BmiI GGNNCC 6 cut(s) 234, 560, 603, 859, 1009, 1344
BmrFI CCNGG 6 cut(s) 500, 699, 884, 1150, 1351, 1388
BmrI ACTGGG 2 cut(s) 9, 445
BmsI GCATC 2 cut(s) 507, 1496
BmuI ACTGGG 2 cut(s) 9, 445
Bpu10I CCTNAGC 2 cut(s) 472, 977
Bpu1102I GCTNAGC 1 cut(s) 782
BpuMI CCSGG 4 cut(s) 699, 884, 1150, 1351
BsaAI YACGTR 1 cut(s) 663
BsaHI GRCGYC 4 cut(s) 858, 1008, 1035, 1068
BsaI GGTCTC 2 cut(s) 735, 881
BsaJI CCNNGG 4 cut(s) 120, 499, 1042, 1128
BsaWI WCCGGW 3 cut(s) 455, 927, 1109
Bsc4I CCNNNNNNNGG 4 cut(s) 287, 1047, 1109, 1131
Bse118I RCCGGY 2 cut(s) 863, 927
Bse1I ACTGG 6 cut(s) 15, 451, 678, 691, 745, 973
BseAI TCCGGA 1 cut(s) 455
BseBI CCWGG 2 cut(s) 500, 1388
BseDI CCNNGG 4 cut(s) 120, 499, 1042, 1128
BseGI GGATG 4 cut(s) 425, 626, 1221, 1511
BseLI CCNNNNNNNGG 4 cut(s) 287, 1047, 1109, 1131
BseMII CTCAG 4 cut(s) 109, 486, 773, 991
BseNI ACTGG 6 cut(s) 15, 451, 678, 691, 745, 973
BseRI GAGGAG 9 cut(s) 19, 22, 25, 28, 31, 34, 196, 700, 1117
BseX3I CGGCCG 1 cut(s) 880
BseXI GCAGC 4 cut(s) 165, 207, 413, 689
BseYI CCCAGC 1 cut(s) 445
BsgI GTGCAG 1 cut(s) 1475
Bsh1236I CGCG 4 cut(s) 1165, 1197, 1202, 1364
Bsh1285I CGRYCG 3 cut(s) 252, 883, 1350
BshFI GGCC 4 cut(s) 498, 831, 882, 1062
BshNI GGYRCC 2 cut(s) 857, 1007
BshTI ACCGGT 1 cut(s) 927
BsiEI CGRYCG 3 cut(s) 252, 883, 1350
BsiHKCI CYCGRG 3 cut(s) 351, 372, 1129
BslFI GGGAC 3 cut(s) 858, 1147, 1165
BslI CCNNNNNNNGG 4 cut(s) 287, 1047, 1109, 1131
BsmAI GTCTC 3 cut(s) 735, 881, 1042
BsmBI CGTCTC 1 cut(s) 1042
BsmFI GGGAC 3 cut(s) 858, 1147, 1165
BsmI GAATGC 1 cut(s) 729
BsnI GGCC 4 cut(s) 498, 831, 882, 1062
Bso31I GGTCTC 2 cut(s) 735, 881
BsoBI CYCGRG 3 cut(s) 351, 372, 1129
Bsp1286I GDGCHC 2 cut(s) 473, 506
Bsp13I TCCGGA 1 cut(s) 455
Bsp143I GATC 5 cut(s) 547, 998, 1077, 1158, 1375
Bsp1720I GCTNAGC 1 cut(s) 782
BspANI GGCC 4 cut(s) 498, 831, 882, 1062
BspCNI CTCAG 4 cut(s) 108, 485, 774, 990
BspEI TCCGGA 1 cut(s) 455
BspFNI CGCG 4 cut(s) 1165, 1197, 1202, 1364
BspHI TCATGA 1 cut(s) 51
BspLI GGNNCC 6 cut(s) 234, 560, 603, 859, 1009, 1344
BspMAI CTGCAG 2 cut(s) 197, 1504
BspMI ACCTGC 2 cut(s) 725, 1447
BspPI GGATC 2 cut(s) 1006, 1085
BspQI GCTCTTC 1 cut(s) 1214
BspT107I GGYRCC 2 cut(s) 857, 1007
BspTNI GGTCTC 2 cut(s) 735, 881
BsrFI RCCGGY 2 cut(s) 863, 927
BsrI ACTGG 6 cut(s) 15, 451, 678, 691, 745, 973
BssAI RCCGGY 2 cut(s) 863, 927
BssECI CCNNGG 4 cut(s) 120, 499, 1042, 1128
BssMI GATC 5 cut(s) 547, 998, 1077, 1158, 1375
BssNI GRCGYC 4 cut(s) 858, 1008, 1035, 1068
BssT1I CCWWGG 1 cut(s) 1042
Bst2UI CCWGG 2 cut(s) 500, 1388
Bst4CI ACNGT 7 cut(s) 160, 253, 396, 409, 1156, 1288, 1406
Bst6I CTCTTC 3 cut(s) 854, 1214, 1442
BstACI GRCGYC 4 cut(s) 858, 1008, 1035, 1068
BstBAI YACGTR 1 cut(s) 663
BstC8I GCNNGC 3 cut(s) 183, 506, 1169
BstDEI CTNAG 4 cut(s) 95, 472, 782, 977
BstDSI CCRYGG 1 cut(s) 120
BstF5I GGATG 4 cut(s) 425, 626, 1221, 1511
BstFNI CGCG 4 cut(s) 1165, 1197, 1202, 1364
BstH2I RGCGCY 3 cut(s) 861, 1011, 1244
BstHHI GCGC 6 cut(s) 707, 860, 1010, 1167, 1197, 1243
BstKTI GATC 5 cut(s) 550, 1001, 1080, 1161, 1378
BstMAI GTCTC 3 cut(s) 735, 881, 1042
BstMBI GATC 5 cut(s) 547, 998, 1077, 1158, 1375
BstMCI CGRYCG 3 cut(s) 252, 883, 1350
BstMWI GCNNNNNNNGC 8 cut(s) 201, 468, 726, 993, 1171, 1187, 1370, 1397
BstNI CCWGG 2 cut(s) 500, 1388
BstNSI RCATGY 1 cut(s) 152
BstSCI CCNGG 6 cut(s) 498, 697, 882, 1148, 1349, 1386
BstSFI CTRYAG 2 cut(s) 193, 1500
BstUI CGCG 4 cut(s) 1165, 1197, 1202, 1364
BstV1I GCAGC 4 cut(s) 165, 207, 413, 689
BstX2I RGATCY 1 cut(s) 998
BstYI RGATCY 1 cut(s) 998
BstZI CGGCCG 1 cut(s) 880
BsuI GTATCC 1 cut(s) 965
BsuRI GGCC 4 cut(s) 498, 831, 882, 1062
BtgI CCRYGG 1 cut(s) 120
BtrI CACGTC 1 cut(s) 555
BtsCI GGATG 4 cut(s) 425, 626, 1221, 1511
BtsI GCAGTG 1 cut(s) 1190
BtsIMutI CAGTG 4 cut(s) 684, 966, 1161, 1190
BveI ACCTGC 2 cut(s) 725, 1447
Cac8I GCNNGC 3 cut(s) 183, 506, 1169
CaiI CAGNNNCTG 1 cut(s) 686
CciI TCATGA 1 cut(s) 51
CfoI GCGC 6 cut(s) 707, 860, 1010, 1167, 1197, 1243
Cfr10I RCCGGY 2 cut(s) 863, 927
Cfr13I GGNCC 4 cut(s) 278, 496, 558, 1342
CseI GACGC 2 cut(s) 709, 1208
Csp6I GTAC 4 cut(s) 254, 266, 736, 1113
CspAI ACCGGT 1 cut(s) 927
CviAII CATG 5 cut(s) 52, 149, 282, 573, 585
CviQI GTAC 4 cut(s) 254, 266, 736, 1113
DdeI CTNAG 4 cut(s) 95, 472, 782, 977
DinI GGCGCC 2 cut(s) 859, 1009
DpnI GATC 5 cut(s) 549, 1000, 1079, 1160, 1377
DpnII GATC 5 cut(s) 547, 998, 1077, 1158, 1375
EaeI YGGCCR 2 cut(s) 829, 880
EagI CGGCCG 1 cut(s) 880
Eam1104I CTCTTC 3 cut(s) 854, 1214, 1442
EarI CTCTTC 3 cut(s) 854, 1214, 1442
EciI GGCGGA 6 cut(s) 199, 410, 418, 646, 901, 1011
EclXI CGGCCG 1 cut(s) 880
Eco130I CCWWGG 1 cut(s) 1042
Eco24I GRGCYC 2 cut(s) 473, 506
Eco31I GGTCTC 2 cut(s) 735, 881
Eco47I GGWCC 3 cut(s) 278, 558, 1342
Eco52I CGGCCG 1 cut(s) 880
Eco57I CTGAAG 1 cut(s) 1255
Eco72I CACGTG 1 cut(s) 663
Eco88I CYCGRG 3 cut(s) 351, 372, 1129
EcoRII CCWGG 2 cut(s) 498, 1386
EcoT14I CCWWGG 1 cut(s) 1042
EcoT38I GRGCYC 2 cut(s) 473, 506
EgeI GGCGCC 2 cut(s) 859, 1009
EheI GGCGCC 2 cut(s) 859, 1009
ErhI CCWWGG 1 cut(s) 1042
Esp3I CGTCTC 1 cut(s) 1042
FaeI CATG 5 cut(s) 55, 152, 285, 576, 588
FaqI GGGAC 3 cut(s) 858, 1147, 1165
FatI CATG 5 cut(s) 51, 148, 281, 572, 584
FauI CCCGC 3 cut(s) 625, 1040, 1082
FbaI TGATCA 1 cut(s) 1158
FblI GTMKAC 3 cut(s) 357, 411, 723
FokI GGATG 3 cut(s) 412, 613, 1228
FriOI GRGCYC 2 cut(s) 473, 506
FspBI CTAG 2 cut(s) 24, 201
GlaI GCGC 6 cut(s) 706, 859, 1009, 1166, 1196, 1242
GsaI CCCAGC 1 cut(s) 449
HaeII RGCGCY 3 cut(s) 861, 1011, 1244
HaeIII GGCC 4 cut(s) 498, 831, 882, 1062
HgaI GACGC 2 cut(s) 709, 1208
HhaI GCGC 6 cut(s) 707, 860, 1010, 1167, 1197, 1243
Hin1I GRCGYC 4 cut(s) 858, 1008, 1035, 1068
Hin1II CATG 5 cut(s) 55, 152, 285, 576, 588
Hin6I GCGC 6 cut(s) 705, 858, 1008, 1165, 1195, 1241
HinP1I GCGC 6 cut(s) 705, 858, 1008, 1165, 1195, 1241
HincII GTYRAC 4 cut(s) 358, 379, 412, 640
HindII GTYRAC 4 cut(s) 358, 379, 412, 640
HinfI GANTC 7 cut(s) 291, 354, 359, 375, 846, 1145, 1249
HphI GGTGA 3 cut(s) 384, 1300, 1418
Hpy166II GTNNAC 7 cut(s) 268, 358, 379, 412, 558, 640, 724
Hpy188I TCNGA 7 cut(s) 552, 670, 761, 854, 1033, 1299, 1490
Hpy188III TCNNGA 9 cut(s) 52, 221, 288, 295, 372, 456, 769, 1075, 1253
Hpy8I GTNNAC 7 cut(s) 268, 358, 379, 412, 558, 640, 724
Hpy99I CGWCG 9 cut(s) 413, 761, 799, 1037, 1070, 1073, 1076, 1202, 1333
HpyAV CCTTC 3 cut(s) 103, 592, 766
HpyCH4III ACNGT 7 cut(s) 160, 253, 396, 409, 1156, 1288, 1406
HpyCH4IV ACGT 9 cut(s) 239, 554, 636, 662, 1035, 1068, 1292, 1331, 1437
HpyCH4V TGCA 3 cut(s) 195, 1456, 1502
HpyF10VI GCNNNNNNNGC 8 cut(s) 201, 468, 726, 993, 1171, 1187, 1370, 1397
HpyF3I CTNAG 4 cut(s) 95, 472, 782, 977
HpySE526I ACGT 9 cut(s) 239, 554, 636, 662, 1035, 1068, 1292, 1331, 1437
Hsp92I GRCGYC 4 cut(s) 858, 1008, 1035, 1068
Hsp92II CATG 5 cut(s) 55, 152, 285, 576, 588
HspAI GCGC 6 cut(s) 705, 858, 1008, 1165, 1195, 1241
KasI GGCGCC 2 cut(s) 857, 1007
Kpn2I TCCGGA 1 cut(s) 455
Ksp22I TGATCA 1 cut(s) 1158
Kzo9I GATC 5 cut(s) 547, 998, 1077, 1158, 1375
LguI GCTCTTC 1 cut(s) 1214
LmnI GCTCC 5 cut(s) 32, 209, 601, 659, 1240
Lsp1109I GCAGC 4 cut(s) 165, 207, 413, 689
LweI GCATC 2 cut(s) 507, 1496
MaeI CTAG 2 cut(s) 24, 201
MaeII ACGT 9 cut(s) 239, 554, 636, 662, 1035, 1068, 1292, 1331, 1437
MaeIII GTNAC 6 cut(s) 218, 587, 1262, 1274, 1288, 1406
MalI GATC 5 cut(s) 549, 1000, 1079, 1160, 1377
MboI GATC 5 cut(s) 547, 998, 1077, 1158, 1375
MflI RGATCY 1 cut(s) 998
MhlI GDGCHC 2 cut(s) 473, 506
MluCI AATT 7 cut(s) 169, 312, 1016, 1097, 1116, 1302, 1337
MluI ACGCGT 1 cut(s) 1200
Mly113I GGCGCC 2 cut(s) 858, 1008
MlyI GAGTC 4 cut(s) 353, 363, 384, 840
MmeI TCCRAC 4 cut(s) 341, 739, 1056, 1314
MroI TCCGGA 1 cut(s) 455
MseI TTAA 1 cut(s) 788
MslI CAYNNNNRTG 1 cut(s) 147
MspA1I CMGCKG 1 cut(s) 963
MspR9I CCNGG 6 cut(s) 500, 699, 884, 1150, 1351, 1388
Mva1269I GAATGC 1 cut(s) 729
MvaI CCWGG 2 cut(s) 500, 1388
MvnI CGCG 4 cut(s) 1165, 1197, 1202, 1364
MwoI GCNNNNNNNGC 8 cut(s) 201, 468, 726, 993, 1171, 1187, 1370, 1397
NarI GGCGCC 2 cut(s) 858, 1008
NciI CCSGG 4 cut(s) 699, 884, 1150, 1351
NdeII GATC 5 cut(s) 547, 998, 1077, 1158, 1375
NlaIII CATG 5 cut(s) 55, 152, 285, 576, 588
NlaIV GGNNCC 6 cut(s) 234, 560, 603, 859, 1009, 1344
NmeAIII GCCGAG 1 cut(s) 858
NmuCI GTSAC 3 cut(s) 218, 1288, 1406
NspI RCATGY 1 cut(s) 152
PagI TCATGA 1 cut(s) 51
PaqCI CACCTGC 2 cut(s) 725, 1447
PciSI GCTCTTC 1 cut(s) 1214
PcsI WCGNNNNNNNCGW 3 cut(s) 245, 1065, 1080
PctI GAATGC 1 cut(s) 729
PfeI GAWTC 3 cut(s) 291, 1145, 1249
PflFI GACNNNGTC 1 cut(s) 1070
PflMI CCANNNNNTGG 1 cut(s) 287
PfoI TCCNGGA 1 cut(s) 1148
PinAI ACCGGT 1 cut(s) 927
PleI GAGTC 4 cut(s) 353, 362, 383, 840
PluTI GGCGCC 2 cut(s) 861, 1011
PmaCI CACGTG 1 cut(s) 663
PmlI CACGTG 1 cut(s) 663
PpsI GAGTC 4 cut(s) 353, 362, 383, 840
Ppu21I YACGTR 1 cut(s) 663
Psp1406I AACGTT 1 cut(s) 1437
Psp6I CCWGG 2 cut(s) 498, 1386
PspCI CACGTG 1 cut(s) 663
PspFI CCCAGC 1 cut(s) 445
PspGI CCWGG 2 cut(s) 498, 1386
PspN4I GGNNCC 6 cut(s) 234, 560, 603, 859, 1009, 1344
PspPI GGNCC 4 cut(s) 278, 496, 558, 1342
PstI CTGCAG 2 cut(s) 197, 1504
PstNI CAGNNNCTG 1 cut(s) 686
PsuI RGATCY 1 cut(s) 998
PsyI GACNNNGTC 1 cut(s) 1070
RsaI GTAC 4 cut(s) 255, 267, 737, 1114
RsaNI GTAC 4 cut(s) 254, 266, 736, 1113
RseI CAYNNNNRTG 1 cut(s) 147
SalI GTCGAC 2 cut(s) 356, 410
SapI GCTCTTC 1 cut(s) 1214
SaqAI TTAA 1 cut(s) 788
Sau3AI GATC 5 cut(s) 547, 998, 1077, 1158, 1375
Sau96I GGNCC 4 cut(s) 278, 496, 558, 1342
SbfI CCTGCAGG 1 cut(s) 1504
SchI GAGTC 4 cut(s) 353, 363, 384, 840
ScrFI CCNGG 6 cut(s) 500, 699, 884, 1150, 1351, 1388
SdaI CCTGCAGG 1 cut(s) 1504
SduI GDGCHC 2 cut(s) 473, 506
SfaNI GCATC 2 cut(s) 507, 1496
SfcI CTRYAG 2 cut(s) 193, 1500
SfoI GGCGCC 2 cut(s) 859, 1009
SinI GGWCC 3 cut(s) 278, 558, 1342
SmiMI CAYNNNNRTG 1 cut(s) 147
Sse8387I CCTGCAGG 1 cut(s) 1504
Sse9I AATT 7 cut(s) 169, 312, 1016, 1097, 1116, 1302, 1337
SspDI GGCGCC 2 cut(s) 857, 1007
SspMI CTAG 2 cut(s) 24, 201
StyD4I CCNGG 6 cut(s) 498, 697, 882, 1148, 1349, 1386
StyI CCWWGG 1 cut(s) 1042
TaaI ACNGT 7 cut(s) 160, 253, 396, 409, 1156, 1288, 1406
TaiI ACGT 9 cut(s) 242, 557, 639, 665, 1038, 1071, 1295, 1334, 1440
TaqI TCGA 9 cut(s) 248, 357, 411, 534, 612, 903, 1065, 1247, 1254
TaqII GACCGA 1 cut(s) 863
TasI AATT 7 cut(s) 169, 312, 1016, 1097, 1116, 1302, 1337
TauI GCSGC 9 cut(s) 8, 831, 863, 966, 996, 1174, 1323, 1367, 1400
TfiI GAWTC 3 cut(s) 291, 1145, 1249
Tru1I TTAA 1 cut(s) 788
Tru9I TTAA 1 cut(s) 788
TscAI CASTG 4 cut(s) 691, 973, 1161, 1197
TseFI GTSAC 3 cut(s) 218, 1288, 1406
TseI GCWGC 4 cut(s) 178, 195, 401, 702
Tsp45I GTSAC 3 cut(s) 218, 1288, 1406
TspDTI ATGAA 1 cut(s) 1232
TspGWI ACGGA 4 cut(s) 291, 745, 753, 812
TspRI CASTG 4 cut(s) 691, 973, 1161, 1197
Tth111I GACNNNGTC 1 cut(s) 1070
Van91I CCANNNNNTGG 1 cut(s) 287
VpaK11BI GGWCC 3 cut(s) 278, 558, 1342
XapI RAATTY 3 cut(s) 312, 1016, 1302
XceI RCATGY 1 cut(s) 152
XmiI GTMKAC 3 cut(s) 357, 411, 723
XspI CTAG 2 cut(s) 24, 201
ZraI GACGTC 2 cut(s) 1036, 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.