Rh6DG397500

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0000845
Physical Location & Seq
Reverse (-)
58816882 .. 58820052
3171 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG397500.1

Sequence Viewer

Length: 1452 bp
ATGGCAACTCCCAGTGTTCATTCTGGCTGCTCCTTCCTCGCGAACAAGTACTTGATTTCCTTTTGTGTATTTGTATGCGTTAATATTCTCTCTTCTCTGGACAAGGGCTTCGCTTTGAGTACTCATCACACAGATGTTCAACTTAGCTCTCTACTACCAGCATCGACCTGCAGCCCCTCTACCATAGGTCATGATAAGAAGAAGGCATCACTTAAAGTGGTACACAGGCATGGTCCATGCTCTAAGAAGTCCAAGCCTAACCAATACAAGACCGCAACTCCAACTCACACTCAGATCCTCCAGCAGGACCAAGCCAGAGTCGACTCAATCCACGCCCGGAAGGGTGACAACCTAAGGCAAACCGACGCATCCATCCCCGCCAAGTCCGGCAGCGTAGTGGGCTCGGGAAACTACATTGTGACCGTGGGCTTGGGCTCACCCGCAAAACAACTCTCGCTCATATTCGACACCGGGAGCGACCTCACTTGGACTCAGTGTCGGCCTTGTGTCAAGTCTTGTTACAAACAGAAGGAGCCCATCTTTGACCCATCCCTCTCCAAATCGTATACCAACATTTCCTGTAATTCGCCAGTCTGCTCTCAACTCACATCAGCCACAGGTAATACACCTGGTTGCTCAAGCGGCACATCAACTTGCATATACGGCATACAATACGGAGATAACTCCTTCTCCGTGGGATACTTTAGCAAAGAAAGGTTGACACTAACGTCAACGGACTATTTCGACGGGTTTCTCTTCGGCTGTGGCCAAAACAATCAAGGCCTTTTTGGCGGGTCTGCAGGGTTATTGGGCTTGGGCCGCAACAAAATCTCCCTCGTCGAACAGAGCGCGCAAAAGTACGGCCGCTTCTTCTCCTACTGCCTACCCTCAACTTCCAGCGCCACCGGTTACCTCAGCTTCGGAAAAGGCGGCGGACCCTCCAACGCAGTCAAGTTCACGCCGCTATCCACTGTATCTGGAGGTGGGTCCTTTTACGGCCTGGATGTCGTTGGAATCAATGTCGGCGGACGTCGGGTATCGATTCCCGCTTCGGTTTTTTCGTCCTCGGGGACGATCATCGACTCAGGGACGGTGATAACGCGGCTTCCGGCAACAGCGTACAGCGCTTTGAGGGATGCGTTTAAGCAAGGAATGAAAAGCTATCCGCAAGCTGAGAAGCTTTCGATACTTGACACGTGCTACGACCTGAGCGGGAGCAGCACGGTGTCGTATCCCAAAATAGCGTTCGCTTTCAGCGGTGGGTTGACGTTGGATTTGGATGCGACGGGCATATTTTACGCGGCCAGTGCTTCGCAGGTGTGCTTGGCGTTCGCTGGGAACAGTGATGACAGCGACATTGCCATATTTGGGAATGTTCAACAGAAACGGTTGCAGGTGGTGTATGACGTCGCTGGTGGAAAGGTTGGATTTGCCCCGGCCGGTTGCCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

483

Amino Acids

50.71

Weight (kDa)

8.96

Isoelectric Point (pI)

34.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 137 - 480 9.7e-22 Eukaryotic aspartyl protease
TAXi_N PF14543 138 - 309 6.9e-54 Xylanase inhibitor N-terminal
TAXi_C PF14541 332 - 478 9.7e-29 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1306, 1384
AasI GACNNNNNNGTC 1 cut(s) 727
AatII GACGTC 2 cut(s) 1033, 1410
Acc36I ACCTGC 3 cut(s) 176, 1306, 1384
AccBSI CCGCTC 1 cut(s) 1212
AccI GTMKAC 2 cut(s) 321, 566
AccII CGCG 4 cut(s) 41, 851, 1102, 1301
AclWI GGATC 1 cut(s) 289
AcoI YGGCCR 4 cut(s) 766, 862, 1302, 1437
AcvI CACGTG 1 cut(s) 1197
AcyI GRCGYC 2 cut(s) 1030, 1407
AfaI GTAC 5 cut(s) 50, 121, 222, 860, 1121
AfeI AGCGCT 1 cut(s) 1126
AfiI CCNNNNNNNGG 2 cut(s) 304, 1368
AflIII ACRYGT 1 cut(s) 1194
AgeI ACCGGT 1 cut(s) 905
AgsI TTSAA 2 cut(s) 140, 1379
AhdI GACNNNNNGTC 1 cut(s) 495
AjnI CCWGG 2 cut(s) 628, 999
AjuI GAANNNNNNNTTGG 2 cut(s) 1229, 1261
AluBI AGCT 5 cut(s) 147, 918, 1161, 1172, 1180
AluI AGCT 5 cut(s) 147, 918, 1161, 1172, 1180
AlwI GGATC 1 cut(s) 289
Ama87I CYCGRG 2 cut(s) 403, 1066
Aor51HI AGCGCT 1 cut(s) 1126
AoxI GGCC 8 cut(s) 500, 766, 781, 817, 862, 997, 1302, 1437
ApeKI GCWGC 4 cut(s) 27, 171, 390, 1218
ArsI GACNNNNNNTTYG 4 cut(s) 92, 124, 1258, 1290
AsiGI ACCGGT 1 cut(s) 905
AspLEI GCGC 4 cut(s) 851, 853, 902, 1127
AspS9I GGNCC 5 cut(s) 233, 307, 817, 935, 987
AsuC2I CCSGG 3 cut(s) 337, 472, 1436
AsuHPI GGTGA 3 cut(s) 356, 429, 1105
AvaI CYCGRG 2 cut(s) 403, 1066
AvaII GGWCC 4 cut(s) 233, 307, 935, 987
AxyI CCTNAGG 1 cut(s) 353
BalI TGGCCA 1 cut(s) 768
BanII GRGCYC 3 cut(s) 404, 437, 537
BarI GAAGNNNNNNTAC 2 cut(s) 851, 883
BbrPI CACGTG 1 cut(s) 1197
BbvCI CCTCAGC 1 cut(s) 914
BbvI GCAGC 4 cut(s) 14, 183, 402, 1230
BccI CCATC 3 cut(s) 380, 545, 556
BceAI ACGGC 3 cut(s) 679, 877, 1012
BciT130I CCWGG 2 cut(s) 630, 1001
BciVI GTATCC 2 cut(s) 692, 1242
BcnI CCSGG 3 cut(s) 337, 472, 1436
BfmI CTRYAG 2 cut(s) 169, 798
BfoI RGCGCY 2 cut(s) 903, 1128
BfuAI ACCTGC 3 cut(s) 176, 1306, 1384
BfuI GTATCC 2 cut(s) 692, 1242
BglI GCCNNNNNGGC 1 cut(s) 789
BmcAI AGTACT 2 cut(s) 50, 121
Bme1390I CCNGG 5 cut(s) 337, 472, 630, 1001, 1436
Bme18I GGWCC 4 cut(s) 233, 307, 935, 987
BmeRI GACNNNNNGTC 1 cut(s) 495
BmeT110I CYCGRG 2 cut(s) 403, 1066
BmgT120I GGNCC 5 cut(s) 233, 307, 817, 935, 987
BmiI GGNNCC 3 cut(s) 534, 937, 988
BmrFI CCNGG 5 cut(s) 337, 472, 630, 1001, 1436
BmrI ACTGGG 1 cut(s) 6
BmsI GCATC 5 cut(s) 170, 215, 377, 1126, 1270
BmuI ACTGGG 1 cut(s) 6
BpmI CTGGAG 2 cut(s) 284, 999
Bpu10I CCTNAGC 2 cut(s) 914, 1208
BpuEI CTTGAG 1 cut(s) 622
BpuMI CCSGG 3 cut(s) 337, 472, 1436
Bsa29I ATCGAT 1 cut(s) 1040
BsaAI YACGTR 1 cut(s) 1197
BsaHI GRCGYC 2 cut(s) 1030, 1407
BsaJI CCNNGG 4 cut(s) 423, 693, 1065, 1434
BsaWI WCCGGW 1 cut(s) 905
BsaXI ACNNNNNCTCC 6 cut(s) 262, 292, 674, 704, 815, 845
Bsc4I CCNNNNNNNGG 2 cut(s) 304, 1368
Bse118I RCCGGY 2 cut(s) 905, 1439
Bse1I ACTGG 3 cut(s) 12, 590, 1305
Bse21I CCTNAGG 1 cut(s) 353
Bse3DI GCAATG 1 cut(s) 1356
BseBI CCWGG 2 cut(s) 630, 1001
BseCI ATCGAT 1 cut(s) 1040
BseDI CCNNGG 4 cut(s) 423, 693, 1065, 1434
BseGI GGATG 6 cut(s) 368, 372, 548, 1009, 1141, 1285
BseLI CCNNNNNNNGG 2 cut(s) 304, 1368
BseMI GCAATG 1 cut(s) 1356
BseMII CTCAG 6 cut(s) 305, 506, 928, 1098, 1164, 1199
BseNI ACTGG 3 cut(s) 12, 590, 1305
BsePI GCGCGC 1 cut(s) 849
BseX3I CGGCCG 2 cut(s) 862, 1437
BseXI GCAGC 4 cut(s) 14, 183, 402, 1230
BseYI CCCAGC 1 cut(s) 1334
Bsh1236I CGCG 4 cut(s) 41, 851, 1102, 1301
Bsh1285I CGRYCG 2 cut(s) 865, 1440
BshFI GGCC 8 cut(s) 502, 768, 783, 819, 864, 999, 1304, 1439
BshTI ACCGGT 1 cut(s) 905
BshVI ATCGAT 1 cut(s) 1040
BsiEI CGRYCG 2 cut(s) 865, 1440
BsiHKCI CYCGRG 2 cut(s) 403, 1066
BsiSI CCGG 7 cut(s) 337, 387, 471, 906, 1109, 1436, 1440
BslFI GGGAC 2 cut(s) 1084, 1102
BslI CCNNNNNNNGG 2 cut(s) 304, 1368
BsmFI GGGAC 2 cut(s) 1084, 1102
BsnI GGCC 8 cut(s) 502, 768, 783, 819, 864, 999, 1304, 1439
BsoBI CYCGRG 2 cut(s) 403, 1066
Bsp1286I GDGCHC 3 cut(s) 404, 437, 537
Bsp143I GATC 2 cut(s) 294, 1074
Bsp68I TCGCGA 1 cut(s) 41
BspANI GGCC 8 cut(s) 502, 768, 783, 819, 864, 999, 1304, 1439
BspCNI CTCAG 6 cut(s) 304, 505, 927, 1097, 1165, 1200
BspDI ATCGAT 1 cut(s) 1040
BspFNI CGCG 4 cut(s) 41, 851, 1102, 1301
BspHI TCATGA 1 cut(s) 190
BspLI GGNNCC 3 cut(s) 534, 937, 988
BspMAI CTGCAG 2 cut(s) 173, 802
BspMI ACCTGC 3 cut(s) 176, 1306, 1384
BspPI GGATC 1 cut(s) 289
BsrBI CCGCTC 1 cut(s) 1212
BsrDI GCAATG 1 cut(s) 1356
BsrFI RCCGGY 2 cut(s) 905, 1439
BsrI ACTGG 3 cut(s) 12, 590, 1305
BssAI RCCGGY 2 cut(s) 905, 1439
BssECI CCNNGG 4 cut(s) 423, 693, 1065, 1434
BssHII GCGCGC 1 cut(s) 849
BssMI GATC 2 cut(s) 294, 1074
BssNAI GTATAC 1 cut(s) 567
BssNI GRCGYC 2 cut(s) 1030, 1407
Bst1107I GTATAC 1 cut(s) 567
Bst2UI CCWGG 2 cut(s) 630, 1001
Bst4CI ACNGT 6 cut(s) 424, 973, 1093, 1225, 1343, 1389
Bst6I CTCTTC 2 cut(s) 97, 761
BstACI GRCGYC 2 cut(s) 1030, 1407
BstBAI YACGTR 1 cut(s) 1197
BstC8I GCNNGC 2 cut(s) 851, 1170
BstDEI CTNAG 9 cut(s) 143, 243, 291, 353, 492, 914, 1084, 1173, 1208
BstDSI CCRYGG 2 cut(s) 423, 693
BstEII GGTNACC 1 cut(s) 908
BstENI CCTNNNNNAGG 1 cut(s) 302
BstF5I GGATG 6 cut(s) 368, 372, 548, 1009, 1141, 1285
BstFNI CGCG 4 cut(s) 41, 851, 1102, 1301
BstH2I RGCGCY 2 cut(s) 903, 1128
BstHHI GCGC 4 cut(s) 851, 853, 902, 1127
BstKTI GATC 2 cut(s) 297, 1077
BstMBI GATC 2 cut(s) 294, 1074
BstMCI CGRYCG 2 cut(s) 865, 1440
BstMWI GCNNNNNNNGC 8 cut(s) 399, 642, 663, 789, 819, 1124, 1218, 1307
BstNI CCWGG 2 cut(s) 630, 1001
BstPI GGTNACC 1 cut(s) 908
BstSCI CCNGG 5 cut(s) 335, 470, 628, 999, 1434
BstSFI CTRYAG 2 cut(s) 169, 798
BstUI CGCG 4 cut(s) 41, 851, 1102, 1301
BstV1I GCAGC 4 cut(s) 14, 183, 402, 1230
BstX2I RGATCY 1 cut(s) 294
BstYI RGATCY 1 cut(s) 294
BstZ17I GTATAC 1 cut(s) 567
BstZI CGGCCG 2 cut(s) 862, 1437
Bsu15I ATCGAT 1 cut(s) 1040
Bsu36I CCTNAGG 1 cut(s) 353
BsuI GTATCC 2 cut(s) 692, 1242
BsuRI GGCC 8 cut(s) 502, 768, 783, 819, 864, 999, 1304, 1439
BsuTUI ATCGAT 1 cut(s) 1040
BtgI CCRYGG 2 cut(s) 423, 693
BtsCI GGATG 6 cut(s) 368, 372, 548, 1009, 1141, 1285
BtsIMutI CAGTG 5 cut(s) 19, 500, 969, 1312, 1348
BtuMI TCGCGA 1 cut(s) 41
BveI ACCTGC 3 cut(s) 176, 1306, 1384
Cac8I GCNNGC 2 cut(s) 851, 1170
CciI TCATGA 1 cut(s) 190
CfoI GCGC 4 cut(s) 851, 853, 902, 1127
Cfr10I RCCGGY 2 cut(s) 905, 1439
Cfr13I GGNCC 5 cut(s) 233, 307, 817, 935, 987
ClaI ATCGAT 1 cut(s) 1040
CseI GACGC 1 cut(s) 374
CsiI ACCWGGT 1 cut(s) 628
Csp6I GTAC 5 cut(s) 49, 120, 221, 859, 1120
CspAI ACCGGT 1 cut(s) 905
CviAII CATG 3 cut(s) 191, 230, 237
CviQI GTAC 5 cut(s) 49, 120, 221, 859, 1120
DdeI CTNAG 9 cut(s) 143, 243, 291, 353, 492, 914, 1084, 1173, 1208
DpnI GATC 2 cut(s) 296, 1076
DpnII GATC 2 cut(s) 294, 1074
DrdI GACNNNNNNGTC 1 cut(s) 727
DriI GACNNNNNGTC 1 cut(s) 495
DseDI GACNNNNNNGTC 1 cut(s) 727
EaeI YGGCCR 4 cut(s) 766, 862, 1302, 1437
EagI CGGCCG 2 cut(s) 862, 1437
Eam1104I CTCTTC 2 cut(s) 97, 761
Eam1105I GACNNNNNGTC 1 cut(s) 495
EarI CTCTTC 2 cut(s) 97, 761
EciI GGCGGA 2 cut(s) 948, 1041
EclXI CGGCCG 2 cut(s) 862, 1437
Eco147I AGGCCT 1 cut(s) 783
Eco24I GRGCYC 3 cut(s) 404, 437, 537
Eco47I GGWCC 4 cut(s) 233, 307, 935, 987
Eco47III AGCGCT 1 cut(s) 1126
Eco52I CGGCCG 2 cut(s) 862, 1437
Eco72I CACGTG 1 cut(s) 1197
Eco81I CCTNAGG 1 cut(s) 353
Eco88I CYCGRG 2 cut(s) 403, 1066
Eco91I GGTNACC 1 cut(s) 908
EcoNI CCTNNNNNAGG 1 cut(s) 302
EcoO109I RGGNCCY 1 cut(s) 987
EcoO65I GGTNACC 1 cut(s) 908
EcoRII CCWGG 2 cut(s) 628, 999
EcoT38I GRGCYC 3 cut(s) 404, 437, 537
FaeI CATG 3 cut(s) 194, 233, 240
FaqI GGGAC 2 cut(s) 1084, 1102
FatI CATG 3 cut(s) 190, 229, 236
FauI CCCGC 5 cut(s) 385, 448, 785, 1054, 1205
FblI GTMKAC 2 cut(s) 321, 566
FokI GGATG 6 cut(s) 355, 359, 535, 1016, 1148, 1292
FriOI GRGCYC 3 cut(s) 404, 437, 537
GlaI GCGC 4 cut(s) 850, 852, 901, 1126
GsaI CCCAGC 1 cut(s) 1338
GsuI CTGGAG 2 cut(s) 284, 999
HaeII RGCGCY 2 cut(s) 903, 1128
HaeIII GGCC 8 cut(s) 502, 768, 783, 819, 864, 999, 1304, 1439
HapII CCGG 7 cut(s) 337, 387, 471, 906, 1109, 1436, 1440
HgaI GACGC 1 cut(s) 374
HhaI GCGC 4 cut(s) 851, 853, 902, 1127
Hin1I GRCGYC 2 cut(s) 1030, 1407
Hin1II CATG 3 cut(s) 194, 233, 240
Hin6I GCGC 4 cut(s) 849, 851, 900, 1125
HinP1I GCGC 4 cut(s) 849, 851, 900, 1125
HincII GTYRAC 4 cut(s) 322, 720, 732, 1266
HindII GTYRAC 4 cut(s) 322, 720, 732, 1266
HindIII AAGCTT 1 cut(s) 1178
HinfI GANTC 6 cut(s) 318, 323, 490, 1014, 1042, 1082
HpaII CCGG 7 cut(s) 337, 387, 471, 906, 1109, 1436, 1440
HphI GGTGA 3 cut(s) 356, 429, 1105
Hpy166II GTNNAC 7 cut(s) 223, 322, 567, 720, 732, 957, 1266
Hpy188I TCNGA 2 cut(s) 294, 923
Hpy188III TCNNGA 5 cut(s) 40, 98, 191, 405, 978
Hpy8I GTNNAC 7 cut(s) 223, 322, 567, 720, 732, 957, 1266
Hpy99I CGWCG 6 cut(s) 368, 749, 842, 1035, 1288, 1412
HpyAV CCTTC 5 cut(s) 43, 196, 334, 523, 697
HpyCH4III ACNGT 6 cut(s) 424, 973, 1093, 1225, 1343, 1389
HpyCH4IV ACGT 5 cut(s) 728, 1030, 1196, 1268, 1407
HpyCH4V TGCA 4 cut(s) 171, 657, 800, 1393
HpyF10VI GCNNNNNNNGC 8 cut(s) 399, 642, 663, 789, 819, 1124, 1218, 1307
HpyF3I CTNAG 9 cut(s) 143, 243, 291, 353, 492, 914, 1084, 1173, 1208
HpySE526I ACGT 5 cut(s) 728, 1030, 1196, 1268, 1407
Hsp92I GRCGYC 2 cut(s) 1030, 1407
Hsp92II CATG 3 cut(s) 194, 233, 240
HspAI GCGC 4 cut(s) 849, 851, 900, 1125
Kzo9I GATC 2 cut(s) 294, 1074
LmnI GCTCC 4 cut(s) 35, 474, 532, 1215
Lsp1109I GCAGC 4 cut(s) 14, 183, 402, 1230
LweI GCATC 5 cut(s) 170, 215, 377, 1126, 1270
MabI ACCWGGT 1 cut(s) 628
MaeII ACGT 5 cut(s) 728, 1030, 1196, 1268, 1407
MaeIII GTNAC 4 cut(s) 344, 418, 518, 908
MalI GATC 2 cut(s) 296, 1076
MbiI CCGCTC 1 cut(s) 1212
MboI GATC 2 cut(s) 294, 1074
MboII GAAGA 4 cut(s) 84, 211, 748, 862
MflI RGATCY 1 cut(s) 294
MhlI GDGCHC 3 cut(s) 404, 437, 537
MlsI TGGCCA 1 cut(s) 768
MluCI AATT 1 cut(s) 583
MluNI TGGCCA 1 cut(s) 768
MlyI GAGTC 4 cut(s) 317, 327, 484, 1076
MmeI TCCRAC 5 cut(s) 305, 966, 991, 1251, 1405
Mox20I TGGCCA 1 cut(s) 768
MscI TGGCCA 1 cut(s) 768
MseI TTAA 3 cut(s) 81, 213, 1143
MslI CAYNNNNRTG 2 cut(s) 132, 228
Msp20I TGGCCA 1 cut(s) 768
MspA1I CMGCKG 1 cut(s) 1257
MspI CCGG 7 cut(s) 337, 387, 471, 906, 1109, 1436, 1440
MspR9I CCNGG 5 cut(s) 337, 472, 630, 1001, 1436
MvaI CCWGG 2 cut(s) 630, 1001
MvnI CGCG 4 cut(s) 41, 851, 1102, 1301
MwoI GCNNNNNNNGC 8 cut(s) 399, 642, 663, 789, 819, 1124, 1218, 1307
NciI CCSGG 3 cut(s) 337, 472, 1436
NdeII GATC 2 cut(s) 294, 1074
NlaIII CATG 3 cut(s) 194, 233, 240
NlaIV GGNNCC 3 cut(s) 534, 937, 988
NmuCI GTSAC 2 cut(s) 344, 418
NruI TCGCGA 1 cut(s) 41
PagI TCATGA 1 cut(s) 190
PaqCI CACCTGC 2 cut(s) 1306, 1384
PauI GCGCGC 1 cut(s) 849
PceI AGGCCT 1 cut(s) 783
PcsI WCGNNNNNNNCGW 1 cut(s) 1058
PfeI GAWTC 2 cut(s) 1014, 1042
PinAI ACCGGT 1 cut(s) 905
PleI GAGTC 4 cut(s) 317, 326, 484, 1076
PmaCI CACGTG 1 cut(s) 1197
PmlI CACGTG 1 cut(s) 1197
PpsI GAGTC 4 cut(s) 317, 326, 484, 1076
Ppu21I YACGTR 1 cut(s) 1197
PpuMI RGGWCCY 1 cut(s) 987
Psp5II RGGWCCY 1 cut(s) 987
Psp6I CCWGG 2 cut(s) 628, 999
PspCI CACGTG 1 cut(s) 1197
PspEI GGTNACC 1 cut(s) 908
PspFI CCCAGC 1 cut(s) 1334
PspGI CCWGG 2 cut(s) 628, 999
PspN4I GGNNCC 3 cut(s) 534, 937, 988
PspPI GGNCC 5 cut(s) 233, 307, 817, 935, 987
PspPPI RGGWCCY 1 cut(s) 987
PstI CTGCAG 2 cut(s) 173, 802
PsuI RGATCY 1 cut(s) 294
PteI GCGCGC 1 cut(s) 849
RruI TCGCGA 1 cut(s) 41
RsaI GTAC 5 cut(s) 50, 121, 222, 860, 1121
RsaNI GTAC 5 cut(s) 49, 120, 221, 859, 1120
RseI CAYNNNNRTG 2 cut(s) 132, 228
SalI GTCGAC 1 cut(s) 320
SaqAI TTAA 3 cut(s) 81, 213, 1143
Sau3AI GATC 2 cut(s) 294, 1074
Sau96I GGNCC 5 cut(s) 233, 307, 817, 935, 987
ScaI AGTACT 2 cut(s) 50, 121
SchI GAGTC 4 cut(s) 317, 327, 484, 1076
ScrFI CCNGG 5 cut(s) 337, 472, 630, 1001, 1436
SduI GDGCHC 3 cut(s) 404, 437, 537
SexAI ACCWGGT 1 cut(s) 628
SfaNI GCATC 5 cut(s) 170, 215, 377, 1126, 1270
SfcI CTRYAG 2 cut(s) 169, 798
SinI GGWCC 4 cut(s) 233, 307, 935, 987
SmiMI CAYNNNNRTG 2 cut(s) 132, 228
SmlI CTYRAG 1 cut(s) 637
SmoI CTYRAG 1 cut(s) 637
Sse9I AATT 1 cut(s) 583
SseBI AGGCCT 1 cut(s) 783
SspI AATATT 1 cut(s) 85
StuI AGGCCT 1 cut(s) 783
StyD4I CCNGG 5 cut(s) 335, 470, 628, 999, 1434
TaaI ACNGT 6 cut(s) 424, 973, 1093, 1225, 1343, 1389
TaiI ACGT 5 cut(s) 731, 1033, 1199, 1271, 1410
TaqI TCGA 8 cut(s) 164, 321, 465, 744, 840, 1040, 1080, 1184
TasI AATT 1 cut(s) 583
TatI WGTACW 2 cut(s) 48, 119
TauI GCSGC 7 cut(s) 645, 822, 867, 933, 964, 1105, 1304
TfiI GAWTC 2 cut(s) 1014, 1042
Tru1I TTAA 3 cut(s) 81, 213, 1143
Tru9I TTAA 3 cut(s) 81, 213, 1143
TscAI CASTG 5 cut(s) 19, 500, 976, 1312, 1348
TseFI GTSAC 2 cut(s) 344, 418
TseI GCWGC 4 cut(s) 27, 171, 390, 1218
Tsp45I GTSAC 2 cut(s) 344, 418
TspDTI ATGAA 2 cut(s) 8, 1169
TspGWI ACGGA 3 cut(s) 682, 690, 749
TspRI CASTG 5 cut(s) 19, 500, 976, 1312, 1348
VpaK11BI GGWCC 4 cut(s) 233, 307, 935, 987
XagI CCTNNNNNAGG 1 cut(s) 302
XmiI GTMKAC 2 cut(s) 321, 566
ZraI GACGTC 2 cut(s) 1031, 1408
ZrmI AGTACT 2 cut(s) 50, 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.