Belongs to the peptidase A1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 197, 713 |
| AatII | GACGTC | 1 cut(s) | 1407 |
| Acc36I | ACCTGC | 3 cut(s) | 197, 713, 1478 |
| AccI | GTMKAC | 1 cut(s) | 941 |
| AccII | CGCG | 3 cut(s) | 653, 1187, 1331 |
| AclWI | GGATC | 3 cut(s) | 628, 840, 853 |
| AcoI | YGGCCR | 2 cut(s) | 868, 1458 |
| AcsI | RAATTY | 1 cut(s) | 272 |
| AcvI | CACGTG | 1 cut(s) | 1245 |
| AcyI | GRCGYC | 1 cut(s) | 1404 |
| AfaI | GTAC | 3 cut(s) | 490, 643, 658 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 36, 674 |
| AflIII | ACRYGT | 2 cut(s) | 1242, 1244 |
| AgeI | ACCGGT | 2 cut(s) | 915, 956 |
| AgsI | TTSAA | 7 cut(s) | 161, 241, 297, 604, 797, 1267, 1427 |
| AhlI | ACTAGT | 1 cut(s) | 305 |
| AjiI | CACGTC | 2 cut(s) | 1020, 1456 |
| AjnI | CCWGG | 2 cut(s) | 345, 539 |
| AluBI | AGCT | 7 cut(s) | 24, 664, 690, 769, 951, 1012, 1084 |
| AluI | AGCT | 7 cut(s) | 24, 664, 690, 769, 951, 1012, 1084 |
| Alw21I | GWGCWC | 1 cut(s) | 252 |
| Alw26I | GTCTC | 2 cut(s) | 869, 1395 |
| Alw44I | GTGCAC | 1 cut(s) | 248 |
| AlwI | GGATC | 3 cut(s) | 628, 840, 853 |
| Ama87I | CYCGRG | 3 cut(s) | 335, 351, 1132 |
| AoxI | GGCC | 9 cut(s) | 260, 348, 676, 817, 832, 868, 1045, 1051, 1458 |
| ApaLI | GTGCAC | 1 cut(s) | 248 |
| ApeKI | GCWGC | 7 cut(s) | 110, 192, 528, 690, 759, 813, 876 |
| ApoI | RAATTY | 1 cut(s) | 272 |
| AsiGI | ACCGGT | 2 cut(s) | 915, 956 |
| AspLEI | GCGC | 2 cut(s) | 1096, 1187 |
| AspS9I | GGNCC | 3 cut(s) | 260, 349, 543 |
| AsuC2I | CCSGG | 1 cut(s) | 1336 |
| AsuHPI | GGTGA | 8 cut(s) | 397, 466, 529, 740, 953, 958, 986, 1153 |
| AvaI | CYCGRG | 3 cut(s) | 335, 351, 1132 |
| AvaII | GGWCC | 1 cut(s) | 543 |
| AxyI | CCTNAGG | 1 cut(s) | 35 |
| BaeGI | GKGCMC | 1 cut(s) | 252 |
| BamHI | GGATCC | 1 cut(s) | 845 |
| BanII | GRGCYC | 1 cut(s) | 597 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 156, 188 |
| BauI | CACGAG | 1 cut(s) | 1147 |
| BbrPI | CACGTG | 1 cut(s) | 1245 |
| BbsI | GAAGAC | 2 cut(s) | 508, 1104 |
| Bbv12I | GWGCWC | 1 cut(s) | 252 |
| BbvI | GCAGC | 7 cut(s) | 122, 204, 540, 677, 771, 800, 888 |
| BccI | CCATC | 3 cut(s) | 605, 676, 1301 |
| BceAI | ACGGC | 4 cut(s) | 704, 1009, 1060, 1179 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 868, 902, 1051, 1085 |
| BciT130I | CCWGG | 2 cut(s) | 347, 541 |
| BclI | TGATCA | 1 cut(s) | 1143 |
| BcnI | CCSGG | 1 cut(s) | 1336 |
| BcoDI | GTCTC | 2 cut(s) | 869, 1395 |
| BcuI | ACTAGT | 1 cut(s) | 305 |
| BfaI | CTAG | 4 cut(s) | 21, 306, 821, 860 |
| BfmI | CTRYAG | 2 cut(s) | 190, 1485 |
| BfuAI | ACCTGC | 3 cut(s) | 197, 713, 1478 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1059 |
| Bme1390I | CCNGG | 3 cut(s) | 347, 541, 1336 |
| Bme18I | GGWCC | 1 cut(s) | 543 |
| BmeT110I | CYCGRG | 3 cut(s) | 335, 351, 1132 |
| BmgBI | CACGTC | 2 cut(s) | 1020, 1456 |
| BmgT120I | GGNCC | 3 cut(s) | 260, 349, 543 |
| BmiI | GGNNCC | 3 cut(s) | 545, 847, 1079 |
| BmrFI | CCNGG | 3 cut(s) | 347, 541, 1336 |
| BmsI | GCATC | 3 cut(s) | 236, 888, 1071 |
| BpiI | GAAGAC | 2 cut(s) | 508, 1104 |
| Bpu10I | CCTNAGC | 1 cut(s) | 457 |
| BpuMI | CCSGG | 1 cut(s) | 1336 |
| BsaAI | YACGTR | 1 cut(s) | 1245 |
| BsaHI | GRCGYC | 1 cut(s) | 1404 |
| BsaI | GGTCTC | 1 cut(s) | 869 |
| BsaJI | CCNNGG | 3 cut(s) | 484, 1048, 1098 |
| BsaWI | WCCGGW | 2 cut(s) | 915, 956 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1433, 1455, 1463, 1485 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 36, 674 |
| Bse118I | RCCGGY | 5 cut(s) | 851, 915, 956, 1058, 1156 |
| Bse1I | ACTGG | 1 cut(s) | 529 |
| Bse21I | CCTNAGG | 1 cut(s) | 35 |
| BseBI | CCWGG | 2 cut(s) | 347, 541 |
| BseDI | CCNNGG | 3 cut(s) | 484, 1048, 1098 |
| BseGI | GGATG | 4 cut(s) | 668, 1022, 1312, 1399 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 36, 674 |
| BseMII | CTCAG | 3 cut(s) | 471, 582, 674 |
| BseNI | ACTGG | 1 cut(s) | 529 |
| BseRI | GAGGAG | 1 cut(s) | 16 |
| BseSI | GKGCMC | 1 cut(s) | 252 |
| BseX3I | CGGCCG | 1 cut(s) | 868 |
| BseXI | GCAGC | 7 cut(s) | 122, 204, 540, 677, 771, 800, 888 |
| Bsh1236I | CGCG | 3 cut(s) | 653, 1187, 1331 |
| Bsh1285I | CGRYCG | 2 cut(s) | 871, 1335 |
| BshFI | GGCC | 9 cut(s) | 262, 350, 678, 819, 834, 870, 1047, 1053, 1460 |
| BshTI | ACCGGT | 2 cut(s) | 915, 956 |
| BsiEI | CGRYCG | 2 cut(s) | 871, 1335 |
| BsiHKAI | GWGCWC | 1 cut(s) | 252 |
| BsiHKCI | CYCGRG | 3 cut(s) | 335, 351, 1132 |
| BslFI | GGGAC | 1 cut(s) | 1150 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 36, 674 |
| BsmAI | GTCTC | 2 cut(s) | 869, 1395 |
| BsmBI | CGTCTC | 1 cut(s) | 1395 |
| BsmFI | GGGAC | 1 cut(s) | 1150 |
| BsnI | GGCC | 9 cut(s) | 262, 350, 678, 819, 834, 870, 1047, 1053, 1460 |
| Bso31I | GGTCTC | 1 cut(s) | 869 |
| BsoBI | CYCGRG | 3 cut(s) | 335, 351, 1132 |
| Bsp1286I | GDGCHC | 2 cut(s) | 252, 597 |
| Bsp143I | GATC | 4 cut(s) | 633, 845, 1122, 1143 |
| BspANI | GGCC | 9 cut(s) | 262, 350, 678, 819, 834, 870, 1047, 1053, 1460 |
| BspCNI | CTCAG | 3 cut(s) | 470, 583, 673 |
| BspFNI | CGCG | 3 cut(s) | 653, 1187, 1331 |
| BspLI | GGNNCC | 3 cut(s) | 545, 847, 1079 |
| BspMAI | CTGCAG | 2 cut(s) | 194, 1489 |
| BspMI | ACCTGC | 3 cut(s) | 197, 713, 1478 |
| BspPI | GGATC | 3 cut(s) | 628, 840, 853 |
| BspTNI | GGTCTC | 1 cut(s) | 869 |
| BsrFI | RCCGGY | 5 cut(s) | 851, 915, 956, 1058, 1156 |
| BsrI | ACTGG | 1 cut(s) | 529 |
| BssAI | RCCGGY | 5 cut(s) | 851, 915, 956, 1058, 1156 |
| BssECI | CCNNGG | 3 cut(s) | 484, 1048, 1098 |
| BssMI | GATC | 4 cut(s) | 633, 845, 1122, 1143 |
| BssNI | GRCGYC | 1 cut(s) | 1404 |
| BssSI | CACGAG | 1 cut(s) | 1147 |
| Bst2BI | CACGAG | 1 cut(s) | 1147 |
| Bst2UI | CCWGG | 2 cut(s) | 347, 541 |
| Bst4CI | ACNGT | 6 cut(s) | 157, 478, 728, 1141, 1273, 1318 |
| Bst6I | CTCTTC | 3 cut(s) | 177, 812, 1427 |
| BstACI | GRCGYC | 1 cut(s) | 1404 |
| BstBAI | YACGTR | 1 cut(s) | 1245 |
| BstC8I | GCNNGC | 4 cut(s) | 554, 1060, 1082, 1158 |
| BstDEI | CTNAG | 4 cut(s) | 35, 457, 591, 660 |
| BstEII | GGTNACC | 1 cut(s) | 959 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 34 |
| BstF5I | GGATG | 4 cut(s) | 668, 1022, 1312, 1399 |
| BstFNI | CGCG | 3 cut(s) | 653, 1187, 1331 |
| BstHHI | GCGC | 2 cut(s) | 1096, 1187 |
| BstKTI | GATC | 4 cut(s) | 636, 848, 1125, 1146 |
| BstMAI | GTCTC | 2 cut(s) | 869, 1395 |
| BstMBI | GATC | 4 cut(s) | 633, 845, 1122, 1143 |
| BstMCI | CGRYCG | 2 cut(s) | 871, 1335 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 110, 876, 1059 |
| BstNI | CCWGG | 2 cut(s) | 347, 541 |
| BstPI | GGTNACC | 1 cut(s) | 959 |
| BstSCI | CCNGG | 3 cut(s) | 345, 539, 1334 |
| BstSFI | CTRYAG | 2 cut(s) | 190, 1485 |
| BstSLI | GKGCMC | 1 cut(s) | 252 |
| BstUI | CGCG | 3 cut(s) | 653, 1187, 1331 |
| BstV1I | GCAGC | 7 cut(s) | 122, 204, 540, 677, 771, 800, 888 |
| BstV2I | GAAGAC | 2 cut(s) | 508, 1104 |
| BstX2I | RGATCY | 2 cut(s) | 633, 845 |
| BstYI | RGATCY | 2 cut(s) | 633, 845 |
| BstZI | CGGCCG | 1 cut(s) | 868 |
| Bsu36I | CCTNAGG | 1 cut(s) | 35 |
| BsuRI | GGCC | 9 cut(s) | 262, 350, 678, 819, 834, 870, 1047, 1053, 1460 |
| BtgZI | GCGATG | 2 cut(s) | 700, 1214 |
| BtrI | CACGTC | 2 cut(s) | 1020, 1456 |
| BtsCI | GGATG | 4 cut(s) | 668, 1022, 1312, 1399 |
| BtsI | GCAGTG | 1 cut(s) | 1179 |
| BtsIMutI | CAGTG | 3 cut(s) | 522, 1179, 1214 |
| BveI | ACCTGC | 3 cut(s) | 197, 713, 1478 |
| Cac8I | GCNNGC | 4 cut(s) | 554, 1060, 1082, 1158 |
| CfoI | GCGC | 2 cut(s) | 1096, 1187 |
| Cfr10I | RCCGGY | 5 cut(s) | 851, 915, 956, 1058, 1156 |
| Cfr13I | GGNCC | 3 cut(s) | 260, 349, 543 |
| CseI | GACGC | 1 cut(s) | 1337 |
| Csp6I | GTAC | 3 cut(s) | 489, 642, 657 |
| CspAI | ACCGGT | 2 cut(s) | 915, 956 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1054, 1089 |
| CviAII | CATG | 7 cut(s) | 13, 46, 257, 264, 323, 558, 639 |
| CviQI | GTAC | 3 cut(s) | 489, 642, 657 |
| DdeI | CTNAG | 4 cut(s) | 35, 457, 591, 660 |
| DpnI | GATC | 4 cut(s) | 635, 847, 1124, 1145 |
| DpnII | GATC | 4 cut(s) | 633, 845, 1122, 1143 |
| EaeI | YGGCCR | 2 cut(s) | 868, 1458 |
| EagI | CGGCCG | 1 cut(s) | 868 |
| Eam1104I | CTCTTC | 3 cut(s) | 177, 812, 1427 |
| EarI | CTCTTC | 3 cut(s) | 177, 812, 1427 |
| EciI | GGCGGA | 4 cut(s) | 403, 607, 685, 838 |
| EclXI | CGGCCG | 1 cut(s) | 868 |
| Eco147I | AGGCCT | 1 cut(s) | 834 |
| Eco24I | GRGCYC | 1 cut(s) | 597 |
| Eco31I | GGTCTC | 1 cut(s) | 869 |
| Eco47I | GGWCC | 1 cut(s) | 543 |
| Eco52I | CGGCCG | 1 cut(s) | 868 |
| Eco72I | CACGTG | 1 cut(s) | 1245 |
| Eco81I | CCTNAGG | 1 cut(s) | 35 |
| Eco88I | CYCGRG | 3 cut(s) | 335, 351, 1132 |
| Eco91I | GGTNACC | 1 cut(s) | 959 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 34 |
| EcoO65I | GGTNACC | 1 cut(s) | 959 |
| EcoRII | CCWGG | 2 cut(s) | 345, 539 |
| EcoT38I | GRGCYC | 1 cut(s) | 597 |
| Esp3I | CGTCTC | 1 cut(s) | 1395 |
| FaeI | CATG | 7 cut(s) | 16, 49, 260, 267, 326, 561, 642 |
| FaqI | GGGAC | 1 cut(s) | 1150 |
| FatI | CATG | 7 cut(s) | 12, 45, 256, 263, 322, 557, 638 |
| FauI | CCCGC | 3 cut(s) | 380, 439, 1173 |
| FbaI | TGATCA | 1 cut(s) | 1143 |
| FblI | GTMKAC | 1 cut(s) | 941 |
| FokI | GGATG | 4 cut(s) | 655, 1009, 1319, 1406 |
| FriOI | GRGCYC | 1 cut(s) | 597 |
| FspBI | CTAG | 4 cut(s) | 21, 306, 821, 860 |
| GlaI | GCGC | 2 cut(s) | 1095, 1186 |
| HaeIII | GGCC | 9 cut(s) | 262, 350, 678, 819, 834, 870, 1047, 1053, 1460 |
| HgaI | GACGC | 1 cut(s) | 1337 |
| HhaI | GCGC | 2 cut(s) | 1096, 1187 |
| Hin1I | GRCGYC | 1 cut(s) | 1404 |
| Hin1II | CATG | 7 cut(s) | 16, 49, 260, 267, 326, 561, 642 |
| Hin6I | GCGC | 2 cut(s) | 1094, 1185 |
| HinP1I | GCGC | 2 cut(s) | 1094, 1185 |
| HincII | GTYRAC | 2 cut(s) | 358, 942 |
| HindII | GTYRAC | 2 cut(s) | 358, 942 |
| HindIII | AAGCTT | 1 cut(s) | 767 |
| HinfI | GANTC | 5 cut(s) | 354, 1034, 1130, 1229, 1420 |
| HphI | GGTGA | 8 cut(s) | 397, 466, 529, 740, 953, 958, 986, 1153 |
| Hpy166II | GTNNAC | 9 cut(s) | 166, 250, 358, 491, 657, 724, 942, 1005, 1321 |
| Hpy188I | TCNGA | 4 cut(s) | 842, 1284, 1350, 1475 |
| Hpy188III | TCNNGA | 6 cut(s) | 91, 1006, 1116, 1147, 1193, 1408 |
| Hpy8I | GTNNAC | 9 cut(s) | 166, 250, 358, 491, 657, 724, 942, 1005, 1321 |
| Hpy99I | CGWCG | 4 cut(s) | 893, 943, 1165, 1409 |
| HpyAV | CCTTC | 6 cut(s) | 40, 618, 748, 895, 979, 1368 |
| HpyCH4III | ACNGT | 6 cut(s) | 157, 478, 728, 1141, 1273, 1318 |
| HpyCH4IV | ACGT | 6 cut(s) | 789, 1019, 1244, 1365, 1404, 1455 |
| HpyCH4V | TGCA | 3 cut(s) | 192, 250, 1487 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 110, 876, 1059 |
| HpyF3I | CTNAG | 4 cut(s) | 35, 457, 591, 660 |
| HpySE526I | ACGT | 6 cut(s) | 789, 1019, 1244, 1365, 1404, 1455 |
| Hsp92I | GRCGYC | 1 cut(s) | 1404 |
| Hsp92II | CATG | 7 cut(s) | 16, 49, 260, 267, 326, 561, 642 |
| HspAI | GCGC | 2 cut(s) | 1094, 1185 |
| KroI | GCCGGC | 2 cut(s) | 1058, 1156 |
| KroNI | GCCGGC | 2 cut(s) | 1060, 1158 |
| Ksp22I | TGATCA | 1 cut(s) | 1143 |
| Kzo9I | GATC | 4 cut(s) | 633, 845, 1122, 1143 |
| LmnI | GCTCC | 7 cut(s) | 29, 272, 669, 698, 873, 956, 1077 |
| Lsp1109I | GCAGC | 7 cut(s) | 122, 204, 540, 677, 771, 800, 888 |
| LweI | GCATC | 3 cut(s) | 236, 888, 1071 |
| MaeI | CTAG | 4 cut(s) | 21, 306, 821, 860 |
| MaeII | ACGT | 6 cut(s) | 789, 1019, 1244, 1365, 1404, 1455 |
| MaeIII | GTNAC | 6 cut(s) | 472, 578, 728, 959, 974, 1247 |
| MalI | GATC | 4 cut(s) | 635, 847, 1124, 1145 |
| MboI | GATC | 4 cut(s) | 633, 845, 1122, 1143 |
| MflI | RGATCY | 2 cut(s) | 633, 845 |
| MhlI | GDGCHC | 2 cut(s) | 252, 597 |
| MluCI | AATT | 2 cut(s) | 75, 272 |
| MlyI | GAGTC | 3 cut(s) | 363, 1043, 1124 |
| MmeI | TCCRAC | 2 cut(s) | 1419, 1453 |
| MroNI | GCCGGC | 2 cut(s) | 1058, 1156 |
| MseI | TTAA | 1 cut(s) | 999 |
| MslI | CAYNNNNRTG | 1 cut(s) | 255 |
| MspA1I | CMGCKG | 2 cut(s) | 1084, 1260 |
| MspR9I | CCNGG | 3 cut(s) | 347, 541, 1336 |
| MvaI | CCWGG | 2 cut(s) | 347, 541 |
| MvnI | CGCG | 3 cut(s) | 653, 1187, 1331 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 110, 876, 1059 |
| NaeI | GCCGGC | 2 cut(s) | 1060, 1158 |
| NciI | CCSGG | 1 cut(s) | 1336 |
| NdeII | GATC | 4 cut(s) | 633, 845, 1122, 1143 |
| NgoMIV | GCCGGC | 2 cut(s) | 1058, 1156 |
| NlaIII | CATG | 7 cut(s) | 16, 49, 260, 267, 326, 561, 642 |
| NlaIV | GGNNCC | 3 cut(s) | 545, 847, 1079 |
| NmeAIII | GCCGAG | 2 cut(s) | 846, 1029 |
| NmuCI | GTSAC | 4 cut(s) | 472, 728, 959, 974 |
| PaeR7I | CTCGAG | 1 cut(s) | 335 |
| PaqCI | CACCTGC | 2 cut(s) | 197, 713 |
| PceI | AGGCCT | 1 cut(s) | 834 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 1106, 1145 |
| PdiI | GCCGGC | 2 cut(s) | 1060, 1158 |
| PfeI | GAWTC | 2 cut(s) | 1229, 1420 |
| PinAI | ACCGGT | 2 cut(s) | 915, 956 |
| PleI | GAGTC | 3 cut(s) | 362, 1042, 1124 |
| PmaCI | CACGTG | 1 cut(s) | 1245 |
| PmlI | CACGTG | 1 cut(s) | 1245 |
| PpsI | GAGTC | 3 cut(s) | 362, 1042, 1124 |
| Ppu21I | YACGTR | 1 cut(s) | 1245 |
| Psp6I | CCWGG | 2 cut(s) | 345, 539 |
| PspCI | CACGTG | 1 cut(s) | 1245 |
| PspEI | GGTNACC | 1 cut(s) | 959 |
| PspGI | CCWGG | 2 cut(s) | 345, 539 |
| PspN4I | GGNNCC | 3 cut(s) | 545, 847, 1079 |
| PspPI | GGNCC | 3 cut(s) | 260, 349, 543 |
| PspXI | VCTCGAGB | 1 cut(s) | 335 |
| PstI | CTGCAG | 2 cut(s) | 194, 1489 |
| PsuI | RGATCY | 2 cut(s) | 633, 845 |
| PvuII | CAGCTG | 1 cut(s) | 1084 |
| RsaI | GTAC | 3 cut(s) | 490, 643, 658 |
| RsaNI | GTAC | 3 cut(s) | 489, 642, 657 |
| RseI | CAYNNNNRTG | 1 cut(s) | 255 |
| SalI | GTCGAC | 1 cut(s) | 940 |
| SaqAI | TTAA | 1 cut(s) | 999 |
| Sau3AI | GATC | 4 cut(s) | 633, 845, 1122, 1143 |
| Sau96I | GGNCC | 3 cut(s) | 260, 349, 543 |
| SbfI | CCTGCAGG | 1 cut(s) | 1489 |
| SchI | GAGTC | 3 cut(s) | 363, 1043, 1124 |
| ScrFI | CCNGG | 3 cut(s) | 347, 541, 1336 |
| SdaI | CCTGCAGG | 1 cut(s) | 1489 |
| SduI | GDGCHC | 2 cut(s) | 252, 597 |
| SfaNI | GCATC | 3 cut(s) | 236, 888, 1071 |
| SfcI | CTRYAG | 2 cut(s) | 190, 1485 |
| Sfr274I | CTCGAG | 1 cut(s) | 335 |
| SinI | GGWCC | 1 cut(s) | 543 |
| SlaI | CTCGAG | 1 cut(s) | 335 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 255 |
| SmlI | CTYRAG | 1 cut(s) | 335 |
| SmoI | CTYRAG | 1 cut(s) | 335 |
| SpeI | ACTAGT | 1 cut(s) | 305 |
| Sse8387I | CCTGCAGG | 1 cut(s) | 1489 |
| Sse9I | AATT | 2 cut(s) | 75, 272 |
| SseBI | AGGCCT | 1 cut(s) | 834 |
| SspMI | CTAG | 4 cut(s) | 21, 306, 821, 860 |
| StuI | AGGCCT | 1 cut(s) | 834 |
| StyD4I | CCNGG | 3 cut(s) | 345, 539, 1334 |
| TaaI | ACNGT | 6 cut(s) | 157, 478, 728, 1141, 1273, 1318 |
| TaiI | ACGT | 6 cut(s) | 792, 1022, 1247, 1368, 1407, 1458 |
| TaqI | TCGA | 8 cut(s) | 90, 336, 519, 681, 891, 941, 1088, 1128 |
| TaqII | GACCGA | 2 cut(s) | 561, 1090 |
| TasI | AATT | 2 cut(s) | 75, 272 |
| TatI | WGTACW | 1 cut(s) | 656 |
| TauI | GCSGC | 4 cut(s) | 419, 653, 819, 1263 |
| TfiI | GAWTC | 2 cut(s) | 1229, 1420 |
| Tru1I | TTAA | 1 cut(s) | 999 |
| Tru9I | TTAA | 1 cut(s) | 999 |
| TscAI | CASTG | 3 cut(s) | 529, 1179, 1221 |
| TseFI | GTSAC | 4 cut(s) | 472, 728, 959, 974 |
| TseI | GCWGC | 7 cut(s) | 110, 192, 528, 690, 759, 813, 876 |
| Tsp45I | GTSAC | 4 cut(s) | 472, 728, 959, 974 |
| TspDTI | ATGAA | 3 cut(s) | 34, 327, 1217 |
| TspGWI | ACGGA | 4 cut(s) | 111, 800, 843, 993 |
| TspRI | CASTG | 3 cut(s) | 529, 1179, 1221 |
| VneI | GTGCAC | 1 cut(s) | 248 |
| VpaK11BI | GGWCC | 1 cut(s) | 543 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 34 |
| XapI | RAATTY | 1 cut(s) | 272 |
| XhoI | CTCGAG | 1 cut(s) | 335 |
| XmiI | GTMKAC | 1 cut(s) | 941 |
| XspI | CTAG | 4 cut(s) | 21, 306, 821, 860 |
| ZraI | GACGTC | 1 cut(s) | 1405 |