Belongs to the peptidase A1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 1306, 1384 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 727 |
| AatII | GACGTC | 2 cut(s) | 1033, 1410 |
| Acc36I | ACCTGC | 3 cut(s) | 176, 1306, 1384 |
| AccI | GTMKAC | 2 cut(s) | 321, 566 |
| AccII | CGCG | 3 cut(s) | 41, 851, 1102 |
| AclWI | GGATC | 1 cut(s) | 289 |
| AcoI | YGGCCR | 2 cut(s) | 766, 862 |
| AcuI | CTGAAG | 2 cut(s) | 999, 1035 |
| AcvI | CACGTG | 1 cut(s) | 1197 |
| AcyI | GRCGYC | 2 cut(s) | 1030, 1407 |
| AfaI | GTAC | 4 cut(s) | 50, 121, 222, 860 |
| AfeI | AGCGCT | 1 cut(s) | 1126 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 304, 1368 |
| AflIII | ACRYGT | 1 cut(s) | 1194 |
| AgeI | ACCGGT | 1 cut(s) | 905 |
| AgsI | TTSAA | 2 cut(s) | 140, 1379 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 495 |
| AjnI | CCWGG | 2 cut(s) | 628, 999 |
| AluBI | AGCT | 5 cut(s) | 108, 147, 918, 1161, 1172 |
| AluI | AGCT | 5 cut(s) | 108, 147, 918, 1161, 1172 |
| AlwI | GGATC | 1 cut(s) | 289 |
| Ama87I | CYCGRG | 1 cut(s) | 403 |
| Aor51HI | AGCGCT | 1 cut(s) | 1126 |
| AoxI | GGCC | 6 cut(s) | 500, 766, 781, 817, 862, 997 |
| ApeKI | GCWGC | 4 cut(s) | 27, 171, 390, 1218 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 92, 124, 1258, 1290 |
| AsiGI | ACCGGT | 1 cut(s) | 905 |
| AspLEI | GCGC | 5 cut(s) | 851, 853, 902, 1127, 1180 |
| AspS9I | GGNCC | 5 cut(s) | 233, 307, 817, 935, 987 |
| AsuC2I | CCSGG | 2 cut(s) | 337, 472 |
| AsuHPI | GGTGA | 4 cut(s) | 356, 429, 579, 1105 |
| AvaI | CYCGRG | 1 cut(s) | 403 |
| AvaII | GGWCC | 4 cut(s) | 233, 307, 935, 987 |
| AxyI | CCTNAGG | 2 cut(s) | 353, 1066 |
| BalI | TGGCCA | 1 cut(s) | 768 |
| BanII | GRGCYC | 3 cut(s) | 404, 437, 537 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 851, 883 |
| BbrPI | CACGTG | 1 cut(s) | 1197 |
| BbvCI | CCTCAGC | 2 cut(s) | 914, 1173 |
| BbvI | GCAGC | 4 cut(s) | 14, 183, 402, 1230 |
| BccI | CCATC | 3 cut(s) | 380, 545, 556 |
| BceAI | ACGGC | 4 cut(s) | 679, 877, 932, 1012 |
| BciT130I | CCWGG | 2 cut(s) | 630, 1001 |
| BciVI | GTATCC | 2 cut(s) | 692, 1242 |
| BcnI | CCSGG | 2 cut(s) | 337, 472 |
| BfaI | CTAG | 1 cut(s) | 1305 |
| BfmI | CTRYAG | 2 cut(s) | 169, 798 |
| BfoI | RGCGCY | 3 cut(s) | 903, 1128, 1181 |
| BfuAI | ACCTGC | 3 cut(s) | 176, 1306, 1384 |
| BfuI | GTATCC | 2 cut(s) | 692, 1242 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 789 |
| BmcAI | AGTACT | 2 cut(s) | 50, 121 |
| Bme1390I | CCNGG | 4 cut(s) | 337, 472, 630, 1001 |
| Bme18I | GGWCC | 4 cut(s) | 233, 307, 935, 987 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 495 |
| BmeT110I | CYCGRG | 1 cut(s) | 403 |
| BmgT120I | GGNCC | 5 cut(s) | 233, 307, 817, 935, 987 |
| BmiI | GGNNCC | 3 cut(s) | 534, 937, 988 |
| BmrFI | CCNGG | 4 cut(s) | 337, 472, 630, 1001 |
| BmrI | ACTGGG | 1 cut(s) | 6 |
| BmsI | GCATC | 5 cut(s) | 170, 215, 377, 1126, 1270 |
| BmuI | ACTGGG | 1 cut(s) | 6 |
| BpmI | CTGGAG | 1 cut(s) | 284 |
| Bpu10I | CCTNAGC | 2 cut(s) | 914, 1173 |
| BpuEI | CTTGAG | 1 cut(s) | 622 |
| BpuMI | CCSGG | 2 cut(s) | 337, 472 |
| Bsa29I | ATCGAT | 1 cut(s) | 1040 |
| BsaAI | YACGTR | 2 cut(s) | 1197, 1300 |
| BsaHI | GRCGYC | 2 cut(s) | 1030, 1407 |
| BsaJI | CCNNGG | 1 cut(s) | 423 |
| BsaWI | WCCGGW | 1 cut(s) | 905 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 262, 292, 815, 845 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 304, 1368 |
| Bse118I | RCCGGY | 2 cut(s) | 905, 1439 |
| Bse1I | ACTGG | 3 cut(s) | 12, 590, 1194 |
| Bse21I | CCTNAGG | 2 cut(s) | 353, 1066 |
| Bse3DI | GCAATG | 1 cut(s) | 1356 |
| BseBI | CCWGG | 2 cut(s) | 630, 1001 |
| BseCI | ATCGAT | 1 cut(s) | 1040 |
| BseDI | CCNNGG | 1 cut(s) | 423 |
| BseGI | GGATG | 6 cut(s) | 368, 372, 548, 1009, 1141, 1285 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 304, 1368 |
| BseMI | GCAATG | 1 cut(s) | 1356 |
| BseMII | CTCAG | 7 cut(s) | 305, 506, 928, 1080, 1098, 1164, 1199 |
| BseNI | ACTGG | 3 cut(s) | 12, 590, 1194 |
| BsePI | GCGCGC | 1 cut(s) | 849 |
| BseX3I | CGGCCG | 1 cut(s) | 862 |
| BseXI | GCAGC | 4 cut(s) | 14, 183, 402, 1230 |
| BseYI | CCCAGC | 1 cut(s) | 1334 |
| Bsh1236I | CGCG | 3 cut(s) | 41, 851, 1102 |
| Bsh1285I | CGRYCG | 1 cut(s) | 865 |
| BshFI | GGCC | 6 cut(s) | 502, 768, 783, 819, 864, 999 |
| BshTI | ACCGGT | 1 cut(s) | 905 |
| BshVI | ATCGAT | 1 cut(s) | 1040 |
| BsiEI | CGRYCG | 1 cut(s) | 865 |
| BsiHKCI | CYCGRG | 1 cut(s) | 403 |
| BsiSI | CCGG | 6 cut(s) | 337, 387, 471, 906, 1109, 1440 |
| BslFI | GGGAC | 2 cut(s) | 1084, 1102 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 304, 1368 |
| BsmFI | GGGAC | 2 cut(s) | 1084, 1102 |
| BsnI | GGCC | 6 cut(s) | 502, 768, 783, 819, 864, 999 |
| BsoBI | CYCGRG | 1 cut(s) | 403 |
| Bsp1286I | GDGCHC | 3 cut(s) | 404, 437, 537 |
| Bsp143I | GATC | 2 cut(s) | 294, 1074 |
| Bsp68I | TCGCGA | 1 cut(s) | 41 |
| BspANI | GGCC | 6 cut(s) | 502, 768, 783, 819, 864, 999 |
| BspCNI | CTCAG | 7 cut(s) | 304, 505, 927, 1079, 1097, 1165, 1200 |
| BspDI | ATCGAT | 1 cut(s) | 1040 |
| BspFNI | CGCG | 3 cut(s) | 41, 851, 1102 |
| BspHI | TCATGA | 1 cut(s) | 190 |
| BspLI | GGNNCC | 3 cut(s) | 534, 937, 988 |
| BspMAI | CTGCAG | 2 cut(s) | 173, 802 |
| BspMI | ACCTGC | 3 cut(s) | 176, 1306, 1384 |
| BspPI | GGATC | 1 cut(s) | 289 |
| BsrDI | GCAATG | 1 cut(s) | 1356 |
| BsrFI | RCCGGY | 2 cut(s) | 905, 1439 |
| BsrI | ACTGG | 3 cut(s) | 12, 590, 1194 |
| BssAI | RCCGGY | 2 cut(s) | 905, 1439 |
| BssECI | CCNNGG | 1 cut(s) | 423 |
| BssHII | GCGCGC | 1 cut(s) | 849 |
| BssMI | GATC | 2 cut(s) | 294, 1074 |
| BssNAI | GTATAC | 1 cut(s) | 567 |
| BssNI | GRCGYC | 2 cut(s) | 1030, 1407 |
| Bst1107I | GTATAC | 1 cut(s) | 567 |
| Bst2UI | CCWGG | 2 cut(s) | 630, 1001 |
| Bst4CI | ACNGT | 5 cut(s) | 424, 973, 1093, 1225, 1389 |
| Bst6I | CTCTTC | 2 cut(s) | 97, 761 |
| BstACI | GRCGYC | 2 cut(s) | 1030, 1407 |
| BstBAI | YACGTR | 2 cut(s) | 1197, 1300 |
| BstC8I | GCNNGC | 1 cut(s) | 851 |
| BstDSI | CCRYGG | 1 cut(s) | 423 |
| BstEII | GGTNACC | 1 cut(s) | 908 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 302 |
| BstF5I | GGATG | 6 cut(s) | 368, 372, 548, 1009, 1141, 1285 |
| BstFNI | CGCG | 3 cut(s) | 41, 851, 1102 |
| BstH2I | RGCGCY | 3 cut(s) | 903, 1128, 1181 |
| BstHHI | GCGC | 5 cut(s) | 851, 853, 902, 1127, 1180 |
| BstKTI | GATC | 2 cut(s) | 297, 1077 |
| BstMBI | GATC | 2 cut(s) | 294, 1074 |
| BstMCI | CGRYCG | 1 cut(s) | 865 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 399, 642, 663, 789, 819, 1124 |
| BstNI | CCWGG | 2 cut(s) | 630, 1001 |
| BstPI | GGTNACC | 1 cut(s) | 908 |
| BstSCI | CCNGG | 4 cut(s) | 335, 470, 628, 999 |
| BstSFI | CTRYAG | 2 cut(s) | 169, 798 |
| BstUI | CGCG | 3 cut(s) | 41, 851, 1102 |
| BstV1I | GCAGC | 4 cut(s) | 14, 183, 402, 1230 |
| BstX2I | RGATCY | 1 cut(s) | 294 |
| BstYI | RGATCY | 1 cut(s) | 294 |
| BstZ17I | GTATAC | 1 cut(s) | 567 |
| BstZI | CGGCCG | 1 cut(s) | 862 |
| Bsu15I | ATCGAT | 1 cut(s) | 1040 |
| Bsu36I | CCTNAGG | 2 cut(s) | 353, 1066 |
| BsuI | GTATCC | 2 cut(s) | 692, 1242 |
| BsuRI | GGCC | 6 cut(s) | 502, 768, 783, 819, 864, 999 |
| BsuTUI | ATCGAT | 1 cut(s) | 1040 |
| BtgI | CCRYGG | 1 cut(s) | 423 |
| BtsCI | GGATG | 6 cut(s) | 368, 372, 548, 1009, 1141, 1285 |
| BtsIMutI | CAGTG | 4 cut(s) | 19, 500, 969, 1230 |
| BtuMI | TCGCGA | 1 cut(s) | 41 |
| BveI | ACCTGC | 3 cut(s) | 176, 1306, 1384 |
| Cac8I | GCNNGC | 1 cut(s) | 851 |
| CciI | TCATGA | 1 cut(s) | 190 |
| CfoI | GCGC | 5 cut(s) | 851, 853, 902, 1127, 1180 |
| Cfr10I | RCCGGY | 2 cut(s) | 905, 1439 |
| Cfr13I | GGNCC | 5 cut(s) | 233, 307, 817, 935, 987 |
| ClaI | ATCGAT | 1 cut(s) | 1040 |
| CseI | GACGC | 1 cut(s) | 374 |
| CsiI | ACCWGGT | 1 cut(s) | 628 |
| Csp6I | GTAC | 4 cut(s) | 49, 120, 221, 859 |
| CspAI | ACCGGT | 1 cut(s) | 905 |
| CviAII | CATG | 3 cut(s) | 191, 230, 237 |
| CviQI | GTAC | 4 cut(s) | 49, 120, 221, 859 |
| DpnI | GATC | 2 cut(s) | 296, 1076 |
| DpnII | GATC | 2 cut(s) | 294, 1074 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 727 |
| DriI | GACNNNNNGTC | 1 cut(s) | 495 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 727 |
| EaeI | YGGCCR | 2 cut(s) | 766, 862 |
| EagI | CGGCCG | 1 cut(s) | 862 |
| Eam1104I | CTCTTC | 2 cut(s) | 97, 761 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 495 |
| EarI | CTCTTC | 2 cut(s) | 97, 761 |
| EciI | GGCGGA | 2 cut(s) | 948, 1041 |
| EclXI | CGGCCG | 1 cut(s) | 862 |
| Eco147I | AGGCCT | 1 cut(s) | 783 |
| Eco24I | GRGCYC | 3 cut(s) | 404, 437, 537 |
| Eco47I | GGWCC | 4 cut(s) | 233, 307, 935, 987 |
| Eco47III | AGCGCT | 1 cut(s) | 1126 |
| Eco52I | CGGCCG | 1 cut(s) | 862 |
| Eco57I | CTGAAG | 2 cut(s) | 999, 1035 |
| Eco72I | CACGTG | 1 cut(s) | 1197 |
| Eco81I | CCTNAGG | 2 cut(s) | 353, 1066 |
| Eco88I | CYCGRG | 1 cut(s) | 403 |
| Eco91I | GGTNACC | 1 cut(s) | 908 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 302 |
| EcoO109I | RGGNCCY | 1 cut(s) | 987 |
| EcoO65I | GGTNACC | 1 cut(s) | 908 |
| EcoRII | CCWGG | 2 cut(s) | 628, 999 |
| EcoT38I | GRGCYC | 3 cut(s) | 404, 437, 537 |
| FaeI | CATG | 3 cut(s) | 194, 233, 240 |
| FaqI | GGGAC | 2 cut(s) | 1084, 1102 |
| FatI | CATG | 3 cut(s) | 190, 229, 236 |
| FauI | CCCGC | 4 cut(s) | 385, 448, 785, 1054 |
| FblI | GTMKAC | 2 cut(s) | 321, 566 |
| FokI | GGATG | 6 cut(s) | 355, 359, 535, 1016, 1148, 1292 |
| FriOI | GRGCYC | 3 cut(s) | 404, 437, 537 |
| FspBI | CTAG | 1 cut(s) | 1305 |
| GlaI | GCGC | 5 cut(s) | 850, 852, 901, 1126, 1179 |
| GsaI | CCCAGC | 1 cut(s) | 1338 |
| GsuI | CTGGAG | 1 cut(s) | 284 |
| HaeII | RGCGCY | 3 cut(s) | 903, 1128, 1181 |
| HaeIII | GGCC | 6 cut(s) | 502, 768, 783, 819, 864, 999 |
| HapII | CCGG | 6 cut(s) | 337, 387, 471, 906, 1109, 1440 |
| HgaI | GACGC | 1 cut(s) | 374 |
| HhaI | GCGC | 5 cut(s) | 851, 853, 902, 1127, 1180 |
| Hin1I | GRCGYC | 2 cut(s) | 1030, 1407 |
| Hin1II | CATG | 3 cut(s) | 194, 233, 240 |
| Hin6I | GCGC | 5 cut(s) | 849, 851, 900, 1125, 1178 |
| HinP1I | GCGC | 5 cut(s) | 849, 851, 900, 1125, 1178 |
| HincII | GTYRAC | 4 cut(s) | 322, 720, 732, 1266 |
| HindII | GTYRAC | 4 cut(s) | 322, 720, 732, 1266 |
| HinfI | GANTC | 7 cut(s) | 318, 323, 490, 1014, 1042, 1082, 1267 |
| HpaII | CCGG | 6 cut(s) | 337, 387, 471, 906, 1109, 1440 |
| HphI | GGTGA | 4 cut(s) | 356, 429, 579, 1105 |
| Hpy166II | GTNNAC | 7 cut(s) | 223, 322, 567, 720, 732, 957, 1266 |
| Hpy188I | TCNGA | 3 cut(s) | 294, 923, 979 |
| Hpy188III | TCNNGA | 5 cut(s) | 40, 98, 191, 405, 1271 |
| Hpy8I | GTNNAC | 7 cut(s) | 223, 322, 567, 720, 732, 957, 1266 |
| Hpy99I | CGWCG | 6 cut(s) | 368, 749, 842, 1035, 1288, 1412 |
| HpyAV | CCTTC | 6 cut(s) | 43, 196, 334, 523, 697, 974 |
| HpyCH4III | ACNGT | 5 cut(s) | 424, 973, 1093, 1225, 1389 |
| HpyCH4IV | ACGT | 5 cut(s) | 728, 1030, 1196, 1299, 1407 |
| HpyCH4V | TGCA | 4 cut(s) | 171, 657, 800, 1393 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 399, 642, 663, 789, 819, 1124 |
| HpySE526I | ACGT | 5 cut(s) | 728, 1030, 1196, 1299, 1407 |
| Hsp92I | GRCGYC | 2 cut(s) | 1030, 1407 |
| Hsp92II | CATG | 3 cut(s) | 194, 233, 240 |
| HspAI | GCGC | 5 cut(s) | 849, 851, 900, 1125, 1178 |
| Kzo9I | GATC | 2 cut(s) | 294, 1074 |
| LmnI | GCTCC | 4 cut(s) | 35, 474, 532, 1215 |
| Lsp1109I | GCAGC | 4 cut(s) | 14, 183, 402, 1230 |
| LweI | GCATC | 5 cut(s) | 170, 215, 377, 1126, 1270 |
| MabI | ACCWGGT | 1 cut(s) | 628 |
| MaeI | CTAG | 1 cut(s) | 1305 |
| MaeII | ACGT | 5 cut(s) | 728, 1030, 1196, 1299, 1407 |
| MaeIII | GTNAC | 4 cut(s) | 344, 418, 518, 908 |
| MalI | GATC | 2 cut(s) | 296, 1076 |
| MboI | GATC | 2 cut(s) | 294, 1074 |
| MboII | GAAGA | 3 cut(s) | 84, 748, 862 |
| MflI | RGATCY | 1 cut(s) | 294 |
| MhlI | GDGCHC | 3 cut(s) | 404, 437, 537 |
| MlsI | TGGCCA | 1 cut(s) | 768 |
| MluCI | AATT | 1 cut(s) | 583 |
| MluNI | TGGCCA | 1 cut(s) | 768 |
| MlyI | GAGTC | 5 cut(s) | 317, 327, 484, 1076, 1261 |
| MmeI | TCCRAC | 4 cut(s) | 305, 966, 991, 1405 |
| Mox20I | TGGCCA | 1 cut(s) | 768 |
| MscI | TGGCCA | 1 cut(s) | 768 |
| MseI | TTAA | 3 cut(s) | 81, 213, 1143 |
| MslI | CAYNNNNRTG | 2 cut(s) | 132, 228 |
| Msp20I | TGGCCA | 1 cut(s) | 768 |
| MspA1I | CMGCKG | 1 cut(s) | 1257 |
| MspI | CCGG | 6 cut(s) | 337, 387, 471, 906, 1109, 1440 |
| MspR9I | CCNGG | 4 cut(s) | 337, 472, 630, 1001 |
| MvaI | CCWGG | 2 cut(s) | 630, 1001 |
| MvnI | CGCG | 3 cut(s) | 41, 851, 1102 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 399, 642, 663, 789, 819, 1124 |
| NciI | CCSGG | 2 cut(s) | 337, 472 |
| NdeII | GATC | 2 cut(s) | 294, 1074 |
| NlaIII | CATG | 3 cut(s) | 194, 233, 240 |
| NlaIV | GGNNCC | 3 cut(s) | 534, 937, 988 |
| NmuCI | GTSAC | 2 cut(s) | 344, 418 |
| NruI | TCGCGA | 1 cut(s) | 41 |
| PagI | TCATGA | 1 cut(s) | 190 |
| PaqCI | CACCTGC | 2 cut(s) | 1306, 1384 |
| PauI | GCGCGC | 1 cut(s) | 849 |
| PceI | AGGCCT | 1 cut(s) | 783 |
| PfeI | GAWTC | 2 cut(s) | 1014, 1042 |
| PinAI | ACCGGT | 1 cut(s) | 905 |
| PleI | GAGTC | 5 cut(s) | 317, 326, 484, 1076, 1261 |
| PmaCI | CACGTG | 1 cut(s) | 1197 |
| PmlI | CACGTG | 1 cut(s) | 1197 |
| PpsI | GAGTC | 5 cut(s) | 317, 326, 484, 1076, 1261 |
| Ppu21I | YACGTR | 2 cut(s) | 1197, 1300 |
| PpuMI | RGGWCCY | 1 cut(s) | 987 |
| Psp5II | RGGWCCY | 1 cut(s) | 987 |
| Psp6I | CCWGG | 2 cut(s) | 628, 999 |
| PspCI | CACGTG | 1 cut(s) | 1197 |
| PspEI | GGTNACC | 1 cut(s) | 908 |
| PspFI | CCCAGC | 1 cut(s) | 1334 |
| PspGI | CCWGG | 2 cut(s) | 628, 999 |
| PspN4I | GGNNCC | 3 cut(s) | 534, 937, 988 |
| PspPI | GGNCC | 5 cut(s) | 233, 307, 817, 935, 987 |
| PspPPI | RGGWCCY | 1 cut(s) | 987 |
| PstI | CTGCAG | 2 cut(s) | 173, 802 |
| PsuI | RGATCY | 1 cut(s) | 294 |
| PteI | GCGCGC | 1 cut(s) | 849 |
| RruI | TCGCGA | 1 cut(s) | 41 |
| RsaI | GTAC | 4 cut(s) | 50, 121, 222, 860 |
| RsaNI | GTAC | 4 cut(s) | 49, 120, 221, 859 |
| RseI | CAYNNNNRTG | 2 cut(s) | 132, 228 |
| SalI | GTCGAC | 1 cut(s) | 320 |
| SaqAI | TTAA | 3 cut(s) | 81, 213, 1143 |
| Sau3AI | GATC | 2 cut(s) | 294, 1074 |
| Sau96I | GGNCC | 5 cut(s) | 233, 307, 817, 935, 987 |
| ScaI | AGTACT | 2 cut(s) | 50, 121 |
| SchI | GAGTC | 5 cut(s) | 317, 327, 484, 1076, 1261 |
| ScrFI | CCNGG | 4 cut(s) | 337, 472, 630, 1001 |
| SduI | GDGCHC | 3 cut(s) | 404, 437, 537 |
| SexAI | ACCWGGT | 1 cut(s) | 628 |
| SfaNI | GCATC | 5 cut(s) | 170, 215, 377, 1126, 1270 |
| SfcI | CTRYAG | 2 cut(s) | 169, 798 |
| SinI | GGWCC | 4 cut(s) | 233, 307, 935, 987 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 132, 228 |
| SmlI | CTYRAG | 1 cut(s) | 637 |
| SmoI | CTYRAG | 1 cut(s) | 637 |
| Sse9I | AATT | 1 cut(s) | 583 |
| SseBI | AGGCCT | 1 cut(s) | 783 |
| SspI | AATATT | 1 cut(s) | 85 |
| SspMI | CTAG | 1 cut(s) | 1305 |
| StuI | AGGCCT | 1 cut(s) | 783 |
| StyD4I | CCNGG | 4 cut(s) | 335, 470, 628, 999 |
| TaaI | ACNGT | 5 cut(s) | 424, 973, 1093, 1225, 1389 |
| TaiI | ACGT | 5 cut(s) | 731, 1033, 1199, 1302, 1410 |
| TaqI | TCGA | 8 cut(s) | 164, 321, 465, 744, 840, 1040, 1080, 1184 |
| TasI | AATT | 1 cut(s) | 583 |
| TatI | WGTACW | 2 cut(s) | 48, 119 |
| TauI | GCSGC | 6 cut(s) | 645, 822, 867, 933, 964, 1105 |
| TfiI | GAWTC | 2 cut(s) | 1014, 1042 |
| Tru1I | TTAA | 3 cut(s) | 81, 213, 1143 |
| Tru9I | TTAA | 3 cut(s) | 81, 213, 1143 |
| TscAI | CASTG | 4 cut(s) | 19, 500, 976, 1230 |
| TseFI | GTSAC | 2 cut(s) | 344, 418 |
| TseI | GCWGC | 4 cut(s) | 27, 171, 390, 1218 |
| Tsp45I | GTSAC | 2 cut(s) | 344, 418 |
| TspDTI | ATGAA | 2 cut(s) | 8, 1169 |
| TspGWI | ACGGA | 1 cut(s) | 690 |
| TspRI | CASTG | 4 cut(s) | 19, 500, 976, 1230 |
| VpaK11BI | GGWCC | 4 cut(s) | 233, 307, 935, 987 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 302 |
| XmiI | GTMKAC | 2 cut(s) | 321, 566 |
| XspI | CTAG | 1 cut(s) | 1305 |
| ZraI | GACGTC | 2 cut(s) | 1031, 1408 |
| ZrmI | AGTACT | 2 cut(s) | 50, 121 |