RchiOBHm_Chr1g0357381

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000845
Physical Location & Seq
Forward (+)
49781358 .. 49784452
3095 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58265

Sequence Viewer

Length: 1560 bp
ATGACTACCATGGCAACTCCCAGTGTTCATTCTGGCTGCTCCTTCCTCGCCAACAAGTACTTGATTTCCTTTTGTGTATTTGTATGCCTTAATATTCTGTCTTCTTTGGACAAGGGCTTCGCTTTGAGTACTCATCAGACAGATGTTCAACTCAGCTCTCTACTACCAGCATCGACCTGCAGCCCCTCCACCAGAGGTCATGATAAGAAGAAGGCAACACTTAAAGTGGTACACAGGCATGGTCCATGCTCTAAGATGTCCCAGCCTAACCAATACAAGACCACAACTCCAACTCACACTCAGATCCTCCAGCAGGACCAAGCCCGAGTCACCTCAATCCACTCCCGGATGGGTGACAACCTAAGGCAAACCGACGCATCCATCCCCGCCAAGTCCGGCAGCGTAGTGGGCTCGGGAAACTACATTGTGACCGTGGGCTTGGGCTCACCCGCAAAACAACTCTCGCTCATATTTGACACCGGGAGCGACCTCACTTGGACTCAGTGTCAACCTTGTGTCAGGTCATGTTACAAACAGAAGGAGCCCATCTTTGACCCATCCCTCTCCAAATCGTATACCAACATTTCCTGTAATTCGCCATTCTGCTCTCAACTCATATCAGCCACAGGTAACGTACAACACAGCCACATGAAATTTTTAGTCTTCATATCAGGGAGAGGCTCTAGTGAGGATTTTCAAATCAACGGTTGGATAAGTACCAGACCTTATTGCAGAAACGGCACATCAACTTGCGTATACGACATACAATACAGAGATAAGTCCTTCTCCGTGGGATTCTTTGCTAAAGAAAGGTTGACACTAACGTCAACGGACTATTTCGATGGGTTTCTCTTCGGCTGTGGCCAAAACAATCAAGGCCTTTTTGGCGGGTCTGGCGGGTTATTGGGCCTGGGCCCCAACAAAATCTCCCTTGTCGAACAGAGCGCCAAAAAGTACGGCCGCTTCTTCTCCTACTGCCTACCCTCAACTTCTTGCGCCACCGGTTACCTCAGCTTCGGAAAAGGCGGCGGACCCTCCAAAGCCGTCAAGTTCATGCCGCTCTCCATTGTATCTGGACGCGGGTACTTAGGCGGGTCCTTTTACGGCCTGGATGTCATTGGAATCAACGTCGGCGGACGTCGGGTATCGATTCCCGCTTTGGTTTTTTCGTCCTCAGGGACCATCATTGACACAGGGACGATGATAACGCGGCTTCCGGCAACGGCGTACAATGCTTTGAGGGATGCTTTTAAGCGAGGAATGAAAAGCTACCCGCAAGCTGAGGCGCTTTCGATACTGGACACGTGCTACGACCTGAGCGGGAGCAGCAAGGTGTCTTATCCCAAAATAGCGTTCGCTTTCAGCGGTGGATTGACGTTGGATTTGGATGCGACAGGCATATTTTACGTGGCCAGTGCTTCACAGGTGTGCTTGGCGTTCGCTGGGAATAGTGATGACAGCGACATTGCCATATTTGGGAATGTTCAACAGAAACGGTTGCAGGTGGTGTATGACGTCGCCGGTGGAAAGATTGGATTTGCCCCAGCCGGTTGCCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

519

Amino Acids

55.52

Weight (kDa)

9.13

Isoelectric Point (pI)

37.09

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 140 - 194 2e-07 Eukaryotic aspartyl protease
TAXi_N PF14543 141 - 341 3.5e-48 Xylanase inhibitor N-terminal
Asp PF00026 253 - 516 1.7e-12 Eukaryotic aspartyl protease
TAXi_C PF14541 368 - 514 4.5e-28 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1492
AasI GACNNNNNNGTC 1 cut(s) 823
AatII GACGTC 2 cut(s) 1141, 1518
Acc36I ACCTGC 2 cut(s) 185, 1492
AccBSI CCGCTC 2 cut(s) 1060, 1320
AccI GTMKAC 2 cut(s) 575, 756
AccII CGCG 2 cut(s) 1080, 1210
AclWI GGATC 1 cut(s) 298
AcoI YGGCCR 3 cut(s) 862, 958, 1410
AcsI RAATTY 1 cut(s) 653
AcvI CACGTG 1 cut(s) 1305
AcyI GRCGYC 2 cut(s) 1138, 1515
AfaI GTAC 8 cut(s) 59, 130, 231, 636, 718, 956, 1085, 1229
AfiI CCNNNNNNNGG 2 cut(s) 313, 1476
AflIII ACRYGT 1 cut(s) 1302
AgeI ACCGGT 1 cut(s) 1001
AgsI TTSAA 3 cut(s) 149, 698, 1487
AhdI GACNNNNNGTC 1 cut(s) 504
AjnI CCWGG 2 cut(s) 909, 1107
AjuI GAANNNNNNNTTGG 2 cut(s) 1337, 1369
AleI CACNNNNGTG 1 cut(s) 1426
AluBI AGCT 4 cut(s) 156, 1014, 1269, 1280
AluI AGCT 4 cut(s) 156, 1014, 1269, 1280
AlwI GGATC 1 cut(s) 298
Ama87I CYCGRG 2 cut(s) 324, 412
AoxI GGCC 7 cut(s) 862, 877, 907, 913, 958, 1105, 1410
ApaI GGGCCC 1 cut(s) 917
ApeKI GCWGC 4 cut(s) 36, 180, 399, 1326
ApoI RAATTY 1 cut(s) 653
ArsI GACNNNNNNTTYG 4 cut(s) 101, 133, 1366, 1398
AsiGI ACCGGT 1 cut(s) 1001
AspLEI GCGC 3 cut(s) 947, 998, 1288
AspS9I GGNCC 8 cut(s) 242, 316, 907, 913, 914, 1031, 1095, 1179
AsuC2I CCSGG 2 cut(s) 346, 481
AsuHPI GGTGA 3 cut(s) 322, 365, 438
AvaI CYCGRG 2 cut(s) 324, 412
AvaII GGWCC 5 cut(s) 242, 316, 1031, 1095, 1179
AxyI CCTNAGG 2 cut(s) 362, 1174
BaeGI GKGCMC 1 cut(s) 917
BalI TGGCCA 2 cut(s) 864, 1412
BanII GRGCYC 4 cut(s) 413, 446, 546, 917
BarI GAAGNNNNNNTAC 2 cut(s) 947, 979
BbrPI CACGTG 1 cut(s) 1305
BbsI GAAGAC 2 cut(s) 93, 655
BbvCI CCTCAGC 2 cut(s) 1010, 1281
BbvI GCAGC 4 cut(s) 23, 192, 411, 1338
BccI CCATC 6 cut(s) 343, 389, 554, 565, 836, 1190
BceAI ACGGC 5 cut(s) 754, 973, 1028, 1120, 1239
BciT130I CCWGG 2 cut(s) 911, 1109
BcnI CCSGG 2 cut(s) 346, 481
BfaI CTAG 1 cut(s) 684
BfmI CTRYAG 1 cut(s) 178
BfoI RGCGCY 2 cut(s) 948, 1289
BfuAI ACCTGC 2 cut(s) 185, 1492
BglI GCCNNNNNGGC 1 cut(s) 885
BisI GCNGC 8 cut(s) 37, 181, 400, 961, 1027, 1058, 1211, 1327
BlsI GCNGC 8 cut(s) 38, 182, 401, 962, 1028, 1059, 1212, 1328
BmcAI AGTACT 2 cut(s) 59, 130
Bme1390I CCNGG 4 cut(s) 346, 481, 911, 1109
Bme18I GGWCC 5 cut(s) 242, 316, 1031, 1095, 1179
BmeRI GACNNNNNGTC 1 cut(s) 504
BmeT110I CYCGRG 2 cut(s) 324, 412
BmgT120I GGNCC 8 cut(s) 242, 316, 907, 913, 914, 1031, 1095, 1179
BmiI GGNNCC 6 cut(s) 543, 915, 916, 1033, 1096, 1180
BmrFI CCNGG 4 cut(s) 346, 481, 911, 1109
BmrI ACTGGG 1 cut(s) 15
BmsI GCATC 4 cut(s) 179, 386, 1234, 1378
BmuI ACTGGG 1 cut(s) 15
BpiI GAAGAC 2 cut(s) 93, 655
BpmI CTGGAG 1 cut(s) 293
Bpu10I CCTNAGC 3 cut(s) 1010, 1281, 1316
BpuMI CCSGG 2 cut(s) 346, 481
Bsa29I ATCGAT 1 cut(s) 1148
BsaAI YACGTR 2 cut(s) 1305, 1408
BsaHI GRCGYC 2 cut(s) 1138, 1515
BsaJI CCNNGG 4 cut(s) 9, 432, 789, 910
BsaWI WCCGGW 1 cut(s) 1001
BsaXI ACNNNNNCTCC 4 cut(s) 271, 301, 911, 941
Bsc4I CCNNNNNNNGG 2 cut(s) 313, 1476
Bse118I RCCGGY 3 cut(s) 1001, 1520, 1547
Bse1I ACTGG 3 cut(s) 21, 1302, 1413
Bse21I CCTNAGG 2 cut(s) 362, 1174
Bse3DI GCAATG 1 cut(s) 1464
BseBI CCWGG 2 cut(s) 911, 1109
BseCI ATCGAT 1 cut(s) 1148
BseDI CCNNGG 4 cut(s) 9, 432, 789, 910
BseGI GGATG 7 cut(s) 354, 377, 381, 557, 1117, 1249, 1393
BseLI CCNNNNNNNGG 2 cut(s) 313, 1476
BseMI GCAATG 1 cut(s) 1464
BseMII CTCAG 7 cut(s) 166, 314, 515, 1024, 1188, 1272, 1307
BseNI ACTGG 3 cut(s) 21, 1302, 1413
BseSI GKGCMC 1 cut(s) 917
BseX3I CGGCCG 1 cut(s) 958
BseXI GCAGC 4 cut(s) 23, 192, 411, 1338
BseYI CCCAGC 3 cut(s) 261, 1442, 1543
Bsh1236I CGCG 2 cut(s) 1080, 1210
Bsh1285I CGRYCG 1 cut(s) 961
BshFI GGCC 7 cut(s) 864, 879, 909, 915, 960, 1107, 1412
BshTI ACCGGT 1 cut(s) 1001
BshVI ATCGAT 1 cut(s) 1148
BsiEI CGRYCG 1 cut(s) 961
BsiHKCI CYCGRG 2 cut(s) 324, 412
BsiSI CCGG 7 cut(s) 346, 396, 480, 1002, 1217, 1521, 1548
BslFI GGGAC 3 cut(s) 244, 1192, 1210
BslI CCNNNNNNNGG 2 cut(s) 313, 1476
BsmFI GGGAC 3 cut(s) 244, 1192, 1210
BsnI GGCC 7 cut(s) 864, 879, 909, 915, 960, 1107, 1412
BsoBI CYCGRG 2 cut(s) 324, 412
Bsp120I GGGCCC 1 cut(s) 913
Bsp1286I GDGCHC 4 cut(s) 413, 446, 546, 917
Bsp143I GATC 1 cut(s) 303
Bsp19I CCATGG 1 cut(s) 9
BspANI GGCC 7 cut(s) 864, 879, 909, 915, 960, 1107, 1412
BspCNI CTCAG 7 cut(s) 165, 313, 514, 1023, 1187, 1273, 1308
BspDI ATCGAT 1 cut(s) 1148
BspFNI CGCG 2 cut(s) 1080, 1210
BspHI TCATGA 1 cut(s) 199
BspLI GGNNCC 6 cut(s) 543, 915, 916, 1033, 1096, 1180
BspMAI CTGCAG 1 cut(s) 182
BspMI ACCTGC 2 cut(s) 185, 1492
BspPI GGATC 1 cut(s) 298
BsrBI CCGCTC 2 cut(s) 1060, 1320
BsrDI GCAATG 1 cut(s) 1464
BsrFI RCCGGY 3 cut(s) 1001, 1520, 1547
BsrI ACTGG 3 cut(s) 21, 1302, 1413
BssAI RCCGGY 3 cut(s) 1001, 1520, 1547
BssECI CCNNGG 4 cut(s) 9, 432, 789, 910
BssMI GATC 1 cut(s) 303
BssNAI GTATAC 2 cut(s) 576, 757
BssNI GRCGYC 2 cut(s) 1138, 1515
BssT1I CCWWGG 1 cut(s) 9
Bst1107I GTATAC 2 cut(s) 576, 757
Bst2UI CCWGG 2 cut(s) 911, 1109
Bst4CI ACNGT 3 cut(s) 433, 707, 1497
Bst6I CTCTTC 1 cut(s) 857
BstACI GRCGYC 2 cut(s) 1138, 1515
BstBAI YACGTR 2 cut(s) 1305, 1408
BstC8I GCNNGC 1 cut(s) 1278
BstDSI CCRYGG 3 cut(s) 9, 432, 789
BstEII GGTNACC 1 cut(s) 1004
BstENI CCTNNNNNAGG 1 cut(s) 311
BstF5I GGATG 7 cut(s) 354, 377, 381, 557, 1117, 1249, 1393
BstFNI CGCG 2 cut(s) 1080, 1210
BstH2I RGCGCY 2 cut(s) 948, 1289
BstHHI GCGC 3 cut(s) 947, 998, 1288
BstKTI GATC 1 cut(s) 306
BstMBI GATC 1 cut(s) 303
BstMCI CGRYCG 1 cut(s) 961
BstMWI GCNNNNNNNGC 6 cut(s) 408, 738, 885, 894, 1232, 1326
BstNI CCWGG 2 cut(s) 911, 1109
BstPI GGTNACC 1 cut(s) 1004
BstSCI CCNGG 4 cut(s) 344, 479, 909, 1107
BstSFI CTRYAG 1 cut(s) 178
BstSLI GKGCMC 1 cut(s) 917
BstUI CGCG 2 cut(s) 1080, 1210
BstV1I GCAGC 4 cut(s) 23, 192, 411, 1338
BstV2I GAAGAC 2 cut(s) 93, 655
BstX2I RGATCY 1 cut(s) 303
BstYI RGATCY 1 cut(s) 303
BstZ17I GTATAC 2 cut(s) 576, 757
BstZI CGGCCG 1 cut(s) 958
Bsu15I ATCGAT 1 cut(s) 1148
Bsu36I CCTNAGG 2 cut(s) 362, 1174
BsuRI GGCC 7 cut(s) 864, 879, 909, 915, 960, 1107, 1412
BsuTUI ATCGAT 1 cut(s) 1148
BtgI CCRYGG 3 cut(s) 9, 432, 789
BtsCI GGATG 7 cut(s) 354, 377, 381, 557, 1117, 1249, 1393
BtsIMutI CAGTG 3 cut(s) 28, 509, 1420
BveI ACCTGC 2 cut(s) 185, 1492
Cac8I GCNNGC 1 cut(s) 1278
CciI TCATGA 1 cut(s) 199
CfoI GCGC 3 cut(s) 947, 998, 1288
Cfr10I RCCGGY 3 cut(s) 1001, 1520, 1547
Cfr13I GGNCC 8 cut(s) 242, 316, 907, 913, 914, 1031, 1095, 1179
ClaI ATCGAT 1 cut(s) 1148
CseI GACGC 2 cut(s) 383, 1086
Csp6I GTAC 8 cut(s) 58, 129, 230, 635, 717, 955, 1084, 1228
CspAI ACCGGT 1 cut(s) 1001
CviAII CATG 7 cut(s) 10, 200, 239, 246, 525, 649, 1054
CviQI GTAC 8 cut(s) 58, 129, 230, 635, 717, 955, 1084, 1228
DpnI GATC 1 cut(s) 305
DpnII GATC 1 cut(s) 303
DrdI GACNNNNNNGTC 1 cut(s) 823
DriI GACNNNNNGTC 1 cut(s) 504
DseDI GACNNNNNNGTC 1 cut(s) 823
EaeI YGGCCR 3 cut(s) 862, 958, 1410
EagI CGGCCG 1 cut(s) 958
Eam1104I CTCTTC 1 cut(s) 857
Eam1105I GACNNNNNGTC 1 cut(s) 504
EarI CTCTTC 1 cut(s) 857
EciI GGCGGA 2 cut(s) 1044, 1149
EclXI CGGCCG 1 cut(s) 958
Eco130I CCWWGG 1 cut(s) 9
Eco147I AGGCCT 1 cut(s) 879
Eco24I GRGCYC 4 cut(s) 413, 446, 546, 917
Eco47I GGWCC 5 cut(s) 242, 316, 1031, 1095, 1179
Eco52I CGGCCG 1 cut(s) 958
Eco72I CACGTG 1 cut(s) 1305
Eco81I CCTNAGG 2 cut(s) 362, 1174
Eco88I CYCGRG 2 cut(s) 324, 412
Eco91I GGTNACC 1 cut(s) 1004
EcoNI CCTNNNNNAGG 1 cut(s) 311
EcoO109I RGGNCCY 2 cut(s) 914, 1095
EcoO65I GGTNACC 1 cut(s) 1004
EcoRII CCWGG 2 cut(s) 909, 1107
EcoT14I CCWWGG 1 cut(s) 9
EcoT38I GRGCYC 4 cut(s) 413, 446, 546, 917
ErhI CCWWGG 1 cut(s) 9
FaeI CATG 7 cut(s) 13, 203, 242, 249, 528, 652, 1057
FaqI GGGAC 3 cut(s) 244, 1192, 1210
FatI CATG 7 cut(s) 9, 199, 238, 245, 524, 648, 1053
FauI CCCGC 9 cut(s) 394, 457, 881, 890, 1073, 1085, 1162, 1281, 1313
FblI GTMKAC 2 cut(s) 575, 756
Fnu4HI GCNGC 8 cut(s) 37, 181, 400, 961, 1027, 1058, 1211, 1327
FokI GGATG 7 cut(s) 361, 364, 368, 544, 1124, 1256, 1400
FriOI GRGCYC 4 cut(s) 413, 446, 546, 917
Fsp4HI GCNGC 8 cut(s) 37, 181, 400, 961, 1027, 1058, 1211, 1327
FspBI CTAG 1 cut(s) 684
GlaI GCGC 3 cut(s) 946, 997, 1287
GluI GCNGC 8 cut(s) 37, 181, 400, 961, 1027, 1058, 1211, 1327
GsaI CCCAGC 3 cut(s) 265, 1446, 1547
GsuI CTGGAG 1 cut(s) 293
HaeII RGCGCY 2 cut(s) 948, 1289
HaeIII GGCC 7 cut(s) 864, 879, 909, 915, 960, 1107, 1412
HapII CCGG 7 cut(s) 346, 396, 480, 1002, 1217, 1521, 1548
HgaI GACGC 2 cut(s) 383, 1086
HhaI GCGC 3 cut(s) 947, 998, 1288
Hin1I GRCGYC 2 cut(s) 1138, 1515
Hin1II CATG 7 cut(s) 13, 203, 242, 249, 528, 652, 1057
Hin6I GCGC 3 cut(s) 945, 996, 1286
HinP1I GCGC 3 cut(s) 945, 996, 1286
HincII GTYRAC 3 cut(s) 509, 816, 828
HindII GTYRAC 3 cut(s) 509, 816, 828
HinfI GANTC 5 cut(s) 327, 499, 795, 1122, 1150
HpaII CCGG 7 cut(s) 346, 396, 480, 1002, 1217, 1521, 1548
HphI GGTGA 3 cut(s) 322, 365, 438
Hpy166II GTNNAC 6 cut(s) 232, 509, 576, 757, 816, 828
Hpy188I TCNGA 3 cut(s) 138, 303, 1019
Hpy188III TCNNGA 3 cut(s) 200, 414, 1074
Hpy8I GTNNAC 6 cut(s) 232, 509, 576, 757, 816, 828
Hpy99I CGWCG 4 cut(s) 377, 1133, 1143, 1520
HpyAV CCTTC 4 cut(s) 52, 205, 532, 793
HpyCH4III ACNGT 3 cut(s) 433, 707, 1497
HpyCH4IV ACGT 8 cut(s) 633, 824, 1128, 1138, 1304, 1376, 1407, 1515
HpyCH4V TGCA 3 cut(s) 180, 732, 1501
HpyF10VI GCNNNNNNNGC 6 cut(s) 408, 738, 885, 894, 1232, 1326
HpySE526I ACGT 8 cut(s) 633, 824, 1128, 1138, 1304, 1376, 1407, 1515
Hsp92I GRCGYC 2 cut(s) 1138, 1515
Hsp92II CATG 7 cut(s) 13, 203, 242, 249, 528, 652, 1057
HspAI GCGC 3 cut(s) 945, 996, 1286
Kzo9I GATC 1 cut(s) 303
LmnI GCTCC 4 cut(s) 44, 483, 541, 1323
Lsp1109I GCAGC 4 cut(s) 23, 192, 411, 1338
LweI GCATC 4 cut(s) 179, 386, 1234, 1378
MaeI CTAG 1 cut(s) 684
MaeII ACGT 8 cut(s) 633, 824, 1128, 1138, 1304, 1376, 1407, 1515
MaeIII GTNAC 6 cut(s) 328, 353, 427, 527, 629, 1004
MalI GATC 1 cut(s) 305
MbiI CCGCTC 2 cut(s) 1060, 1320
MboI GATC 1 cut(s) 303
MboII GAAGA 5 cut(s) 93, 220, 655, 844, 958
MflI RGATCY 1 cut(s) 303
MhlI GDGCHC 4 cut(s) 413, 446, 546, 917
MlsI TGGCCA 2 cut(s) 864, 1412
MluCI AATT 2 cut(s) 592, 653
MluNI TGGCCA 2 cut(s) 864, 1412
MlyI GAGTC 2 cut(s) 336, 493
MmeI TCCRAC 3 cut(s) 314, 689, 1359
Mox20I TGGCCA 2 cut(s) 864, 1412
MscI TGGCCA 2 cut(s) 864, 1412
MseI TTAA 3 cut(s) 90, 222, 1251
MslI CAYNNNNRTG 2 cut(s) 237, 1426
Msp20I TGGCCA 2 cut(s) 864, 1412
MspA1I CMGCKG 1 cut(s) 1365
MspI CCGG 7 cut(s) 346, 396, 480, 1002, 1217, 1521, 1548
MspR9I CCNGG 4 cut(s) 346, 481, 911, 1109
MvaI CCWGG 2 cut(s) 911, 1109
MvnI CGCG 2 cut(s) 1080, 1210
MwoI GCNNNNNNNGC 6 cut(s) 408, 738, 885, 894, 1232, 1326
NciI CCSGG 2 cut(s) 346, 481
NcoI CCATGG 1 cut(s) 9
NdeII GATC 1 cut(s) 303
NlaIII CATG 7 cut(s) 13, 203, 242, 249, 528, 652, 1057
NlaIV GGNNCC 6 cut(s) 543, 915, 916, 1033, 1096, 1180
NmuCI GTSAC 3 cut(s) 328, 353, 427
OliI CACNNNNGTG 1 cut(s) 1426
PagI TCATGA 1 cut(s) 199
PaqCI CACCTGC 1 cut(s) 1492
PceI AGGCCT 1 cut(s) 879
PfeI GAWTC 3 cut(s) 795, 1122, 1150
PfoI TCCNGGA 1 cut(s) 344
PinAI ACCGGT 1 cut(s) 1001
PkrI GCNGC 8 cut(s) 38, 182, 401, 962, 1028, 1059, 1212, 1328
PleI GAGTC 2 cut(s) 335, 493
PmaCI CACGTG 1 cut(s) 1305
PmlI CACGTG 1 cut(s) 1305
PpsI GAGTC 2 cut(s) 335, 493
Ppu21I YACGTR 2 cut(s) 1305, 1408
PpuMI RGGWCCY 1 cut(s) 1095
Psp5II RGGWCCY 1 cut(s) 1095
Psp6I CCWGG 2 cut(s) 909, 1107
PspCI CACGTG 1 cut(s) 1305
PspEI GGTNACC 1 cut(s) 1004
PspFI CCCAGC 3 cut(s) 261, 1442, 1543
PspGI CCWGG 2 cut(s) 909, 1107
PspN4I GGNNCC 6 cut(s) 543, 915, 916, 1033, 1096, 1180
PspOMI GGGCCC 1 cut(s) 913
PspPI GGNCC 8 cut(s) 242, 316, 907, 913, 914, 1031, 1095, 1179
PspPPI RGGWCCY 1 cut(s) 1095
PstI CTGCAG 1 cut(s) 182
PsuI RGATCY 1 cut(s) 303
RsaI GTAC 8 cut(s) 59, 130, 231, 636, 718, 956, 1085, 1229
RsaNI GTAC 8 cut(s) 58, 129, 230, 635, 717, 955, 1084, 1228
RseI CAYNNNNRTG 2 cut(s) 237, 1426
SaqAI TTAA 3 cut(s) 90, 222, 1251
SatI GCNGC 8 cut(s) 37, 181, 400, 961, 1027, 1058, 1211, 1327
Sau3AI GATC 1 cut(s) 303
Sau96I GGNCC 8 cut(s) 242, 316, 907, 913, 914, 1031, 1095, 1179
ScaI AGTACT 2 cut(s) 59, 130
SchI GAGTC 2 cut(s) 336, 493
ScrFI CCNGG 4 cut(s) 346, 481, 911, 1109
SduI GDGCHC 4 cut(s) 413, 446, 546, 917
SfaNI GCATC 4 cut(s) 179, 386, 1234, 1378
SfcI CTRYAG 1 cut(s) 178
SgrAI CRCCGGYG 1 cut(s) 1520
SinI GGWCC 5 cut(s) 242, 316, 1031, 1095, 1179
SmiMI CAYNNNNRTG 2 cut(s) 237, 1426
Sse9I AATT 2 cut(s) 592, 653
SseBI AGGCCT 1 cut(s) 879
SspI AATATT 1 cut(s) 94
SspMI CTAG 1 cut(s) 684
StuI AGGCCT 1 cut(s) 879
StyD4I CCNGG 4 cut(s) 344, 479, 909, 1107
StyI CCWWGG 1 cut(s) 9
TaaI ACNGT 3 cut(s) 433, 707, 1497
TaiI ACGT 8 cut(s) 636, 827, 1131, 1141, 1307, 1379, 1410, 1518
TaqI TCGA 5 cut(s) 173, 840, 936, 1148, 1292
TasI AATT 2 cut(s) 592, 653
TatI WGTACW 2 cut(s) 57, 128
TauI GCSGC 4 cut(s) 963, 1029, 1060, 1213
TfiI GAWTC 3 cut(s) 795, 1122, 1150
Tru1I TTAA 3 cut(s) 90, 222, 1251
Tru9I TTAA 3 cut(s) 90, 222, 1251
TscAI CASTG 3 cut(s) 28, 509, 1420
TseFI GTSAC 3 cut(s) 328, 353, 427
TseI GCWGC 4 cut(s) 36, 180, 399, 1326
Tsp45I GTSAC 3 cut(s) 328, 353, 427
TspDTI ATGAA 5 cut(s) 17, 655, 665, 1042, 1277
TspGWI ACGGA 2 cut(s) 778, 845
TspRI CASTG 3 cut(s) 28, 509, 1420
VpaK11BI GGWCC 5 cut(s) 242, 316, 1031, 1095, 1179
XagI CCTNNNNNAGG 1 cut(s) 311
XapI RAATTY 1 cut(s) 653
XmiI GTMKAC 2 cut(s) 575, 756
XspI CTAG 1 cut(s) 684
ZraI GACGTC 2 cut(s) 1139, 1516
ZrmI AGTACT 2 cut(s) 59, 130
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.