Rroxscaffold_5G00347210

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000845
Physical Location & Seq
Forward (+)
18455353 .. 18460403
5051 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00347210.1

Sequence Viewer

Length: 1425 bp
ATGAGGAATTTCATCGGTTTGTCTCTACTTCTATGCCTGGCTCTGTGCTCTTTGGACAAAGGCTTTGCCTTGGCAGAAGCAGATTCAAAATTCACCAACACAGTTCATCTCCGCTCTCTACTGCCAGCAATGACCTGCAGCCCCTCCACCAAAGGTAACAAGAGGAAGGCATCTCTTGAAGTGGTACACAAGTATGGGCCATGCTCTTATCTCCCTCAACACAAAGCAACTGCTACGAATCACACTCAAATTCTAGAGCAAGACCAAGTGCGGGTCAACTCAATCAACTCCCGGATTTCCATGAAATTGAACGGCAACGAGGATCTAAGCCAATCAGAGGTCACCACCCTCCCGACCAAGTGGGCTACCAGCCAAGGTGCAAGCAACTACGTGGTGACAGTGGGATTGGGCACACCTAACAAAAAACTTCCGCTCATATTTGACACCGGAAGCTTTCTCACTTGGACTCGATGCCAACCTTGTGCTGGCTCTTGCAACCCACAAAAGGAGCCCATTTTCGATCCCTCGGCCTCCACCTCATATACCAACATTTCCTGTAATAGCACAGACTGCGTCCAACTTAGGACAACTACGAAATTCAACAAATGCTTAGCAGACACATGCCTATACGCCGTGGTGTACGGAGACTCATCCTACACCATTGGATTATTCGCCACAGACAAGCTGACCTTAACTCCAAACGACGTGTTCGATGGGTTCCCCTTTGGCTGCAGCAAAAAAGACGAAGGCTTCATCAATGGCACGGCCGGTATACTTGGTCTCTCCCGCAACAAGTTCTCCATTCTTGAACAAACCGCACAAAAGTACAACCGCTTCTTCTCCTACTGCCTGCCACCAACTGCAAGCTCTACTGGTTACCTCAGCTTCGGAGCACCCGATGGAGCTTCCAATGCTGCTGTAAAATACACACGGCTCACTACTTTATCCTCGAGCTCAGAGTTTTACGGCATAGATGTGGTTGGCATCAATGTGAACGGACAAAAGCTCTCAATTCCTGCTTCGGTGTTTTCCTTCCCAGGGACGATCATCGACTCCGGGACCGTCATCTCACGACTGCCGTCCACAGCGTATACCGCTTTGCGGGATGCATTTCGCGCAGCGATGACAAGCTATCCGTTAGTTCCGGGTCCGGGTGAGCTCCTAGATACATGCTACGACCTTAGTAGCTATCCAAAGGTGATGTATCCGAAAATAGAGTTTGTGTTCGGCGACGGGGTTACTTTGGAATTGGACGCAACCGGAATTGTCTACTTTCTCAACGATTTGAAGCAGGTTTGCTTGGCTTTTGCTGGGAATGATGATCCTAACGACATTGCGATTTTCGGGAATACTCAGCAGAAGAATATGGAGGTGTTGTATGACGTTGCCGGAGGGAGAATCGGATTTGCTCCCGGTGGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

474

Amino Acids

51.11

Weight (kDa)

6.86

Isoelectric Point (pI)

32.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 129 - 183 2e-08 Eukaryotic aspartyl protease
TAXi_N PF14543 130 - 297 3.6e-48 Xylanase inhibitor N-terminal
Asp PF00026 210 - 471 2.2e-15 Eukaryotic aspartyl protease
TAXi_C PF14541 322 - 470 2.2e-27 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 143, 1282
AccBSI CCGCTC 2 cut(s) 114, 433
AccI GTMKAC 3 cut(s) 772, 1091, 1269
AccII CGCG 1 cut(s) 1116
AciI CCGC 8 cut(s) 112, 271, 431, 787, 816, 832, 1095, 1102
AclWI GGATC 3 cut(s) 330, 515, 1316
AcoI YGGCCR 1 cut(s) 765
AcsI RAATTY 4 cut(s) 7, 89, 249, 596
AfaI GTAC 3 cut(s) 186, 641, 827
AfiI CCNNNNNNNGG 7 cut(s) 271, 337, 485, 505, 1038, 1101, 1151
AflIII ACRYGT 1 cut(s) 705
AgsI TTSAA 6 cut(s) 87, 179, 310, 601, 809, 1288
AjiI CACGTC 1 cut(s) 706
AjnI CCWGG 2 cut(s) 36, 1036
Alw21I GWGCWC 4 cut(s) 50, 895, 956, 1161
Alw26I GTCTC 3 cut(s) 27, 639, 785
AlwI GGATC 3 cut(s) 330, 515, 1316
Ama87I CYCGRG 1 cut(s) 949
AoxI GGCC 3 cut(s) 197, 528, 765
ApeKI GCWGC 5 cut(s) 138, 729, 732, 914, 1118
ApoI RAATTY 4 cut(s) 7, 89, 249, 596
ArsI GACNNNNNNTTYG 2 cut(s) 47, 79
AspLEI GCGC 1 cut(s) 1118
AspS9I GGNCC 3 cut(s) 197, 1059, 1148
AsuC2I CCSGG 5 cut(s) 292, 1057, 1146, 1152, 1413
AsuHPI GGTGA 5 cut(s) 85, 334, 406, 1166, 1210
AvaI CYCGRG 1 cut(s) 949
AvaII GGWCC 2 cut(s) 1059, 1148
BaeGI GKGCMC 1 cut(s) 413
BaeI ACNNNNGTAYC 2 cut(s) 176, 209
BanII GRGCYC 3 cut(s) 513, 956, 1161
BarI GAAGNNNNNNTAC 2 cut(s) 818, 850
Bbv12I GWGCWC 4 cut(s) 50, 895, 956, 1161
BbvCI CCTCAGC 1 cut(s) 881
BbvI GCAGC 5 cut(s) 150, 716, 744, 901, 1130
BccI CCATC 2 cut(s) 707, 893
BceAI ACGGC 6 cut(s) 328, 617, 780, 947, 982, 1063
BciT130I CCWGG 2 cut(s) 38, 1038
BciVI GTATCC 1 cut(s) 1215
BcnI CCSGG 5 cut(s) 292, 1057, 1146, 1152, 1413
BcoDI GTCTC 3 cut(s) 27, 639, 785
BfaI CTAG 2 cut(s) 254, 1163
BfmI CTRYAG 2 cut(s) 136, 730
BfuAI ACCTGC 2 cut(s) 143, 1282
BfuI GTATCC 1 cut(s) 1215
BisI GCNGC 5 cut(s) 139, 730, 733, 915, 1119
BlpI GCTNAGC 1 cut(s) 610
BlsI GCNGC 5 cut(s) 140, 731, 734, 916, 1120
Bme1390I CCNGG 7 cut(s) 38, 292, 1038, 1057, 1146, 1152, 1413
Bme18I GGWCC 2 cut(s) 1059, 1148
BmeT110I CYCGRG 1 cut(s) 949
BmgBI CACGTC 1 cut(s) 706
BmgT120I GGNCC 3 cut(s) 197, 1059, 1148
BmiI GGNNCC 4 cut(s) 510, 719, 1060, 1149
BmrFI CCNGG 7 cut(s) 38, 292, 1038, 1057, 1146, 1152, 1413
BmsI GCATC 4 cut(s) 179, 461, 993, 1096
BoxI GACNNNNGTC 1 cut(s) 1078
Bpu10I CCTNAGC 1 cut(s) 881
Bpu1102I GCTNAGC 1 cut(s) 610
BpuMI CCSGG 5 cut(s) 292, 1057, 1146, 1152, 1413
BsaAI YACGTR 1 cut(s) 391
BsaI GGTCTC 1 cut(s) 785
BsaJI CCNNGG 6 cut(s) 69, 373, 525, 633, 1036, 1037
BsaWI WCCGGW 2 cut(s) 446, 1259
BsaXI ACNNNNNCTCC 6 cut(s) 679, 709, 782, 812, 1361, 1391
Bsc4I CCNNNNNNNGG 7 cut(s) 271, 337, 485, 505, 1038, 1101, 1151
Bse118I RCCGGY 1 cut(s) 767
Bse1I ACTGG 1 cut(s) 877
Bse3DI GCAATG 2 cut(s) 135, 1332
BseBI CCWGG 2 cut(s) 38, 1038
BseDI CCNNGG 6 cut(s) 69, 373, 525, 633, 1036, 1037
BseGI GGATG 2 cut(s) 650, 1111
BseLI CCNNNNNNNGG 7 cut(s) 271, 337, 485, 505, 1038, 1101, 1151
BseMI GCAATG 2 cut(s) 135, 1332
BseMII CTCAG 3 cut(s) 895, 969, 1367
BseNI ACTGG 1 cut(s) 877
BseSI GKGCMC 1 cut(s) 413
BseX3I CGGCCG 1 cut(s) 765
BseXI GCAGC 5 cut(s) 150, 716, 744, 901, 1130
BseYI CCCAGC 1 cut(s) 1310
Bsh1236I CGCG 1 cut(s) 1116
Bsh1285I CGRYCG 1 cut(s) 768
BshFI GGCC 3 cut(s) 199, 530, 767
BsiEI CGRYCG 1 cut(s) 768
BsiHKAI GWGCWC 4 cut(s) 50, 895, 956, 1161
BsiHKCI CYCGRG 1 cut(s) 949
BsiSI CCGG 9 cut(s) 292, 447, 768, 1056, 1145, 1151, 1260, 1389, 1413
BslFI GGGAC 2 cut(s) 1054, 1072
BslI CCNNNNNNNGG 7 cut(s) 271, 337, 485, 505, 1038, 1101, 1151
BsmAI GTCTC 3 cut(s) 27, 639, 785
BsmFI GGGAC 2 cut(s) 1054, 1072
BsnI GGCC 3 cut(s) 199, 530, 767
Bso31I GGTCTC 1 cut(s) 785
BsoBI CYCGRG 1 cut(s) 949
Bsp1286I GDGCHC 6 cut(s) 50, 413, 513, 895, 956, 1161
Bsp143I GATC 4 cut(s) 322, 520, 1044, 1321
Bsp1720I GCTNAGC 1 cut(s) 610
BspACI CCGC 8 cut(s) 112, 271, 431, 787, 816, 832, 1095, 1102
BspANI GGCC 3 cut(s) 199, 530, 767
BspCNI CTCAG 3 cut(s) 894, 968, 1366
BspFNI CGCG 1 cut(s) 1116
BspLI GGNNCC 4 cut(s) 510, 719, 1060, 1149
BspMAI CTGCAG 2 cut(s) 140, 734
BspMI ACCTGC 2 cut(s) 143, 1282
BspPI GGATC 3 cut(s) 330, 515, 1316
BspTNI GGTCTC 1 cut(s) 785
BsrBI CCGCTC 2 cut(s) 114, 433
BsrDI GCAATG 2 cut(s) 135, 1332
BsrFI RCCGGY 1 cut(s) 767
BsrI ACTGG 1 cut(s) 877
BssAI RCCGGY 1 cut(s) 767
BssECI CCNNGG 6 cut(s) 69, 373, 525, 633, 1036, 1037
BssMI GATC 4 cut(s) 322, 520, 1044, 1321
BssNAI GTATAC 2 cut(s) 773, 1092
BssT1I CCWWGG 2 cut(s) 69, 373
Bst1107I GTATAC 2 cut(s) 773, 1092
Bst2UI CCWGG 2 cut(s) 38, 1038
Bst4CI ACNGT 3 cut(s) 103, 400, 1063
BstAPI GCANNNNNTGC 1 cut(s) 570
BstBAI YACGTR 1 cut(s) 391
BstC8I GCNNGC 5 cut(s) 126, 382, 487, 851, 865
BstDEI CTNAG 7 cut(s) 326, 581, 610, 881, 955, 1181, 1353
BstDSI CCRYGG 1 cut(s) 633
BstEII GGTNACC 2 cut(s) 340, 875
BstF5I GGATG 2 cut(s) 650, 1111
BstFNI CGCG 1 cut(s) 1116
BstHHI GCGC 1 cut(s) 1118
BstKTI GATC 4 cut(s) 325, 523, 1047, 1324
BstMAI GTCTC 3 cut(s) 27, 639, 785
BstMBI GATC 4 cut(s) 322, 520, 1044, 1321
BstMCI CGRYCG 1 cut(s) 768
BstMWI GCNNNNNNNGC 4 cut(s) 570, 911, 1094, 1115
BstNI CCWGG 2 cut(s) 38, 1038
BstNSI RCATGY 2 cut(s) 624, 1173
BstPAI GACNNNNGTC 1 cut(s) 1078
BstPI GGTNACC 2 cut(s) 340, 875
BstSCI CCNGG 7 cut(s) 36, 290, 1036, 1055, 1144, 1150, 1411
BstSFI CTRYAG 2 cut(s) 136, 730
BstSLI GKGCMC 1 cut(s) 413
BstUI CGCG 1 cut(s) 1116
BstV1I GCAGC 5 cut(s) 150, 716, 744, 901, 1130
BstX2I RGATCY 1 cut(s) 322
BstYI RGATCY 1 cut(s) 322
BstZ17I GTATAC 2 cut(s) 773, 1092
BstZI CGGCCG 1 cut(s) 765
BsuI GTATCC 1 cut(s) 1215
BsuRI GGCC 3 cut(s) 199, 530, 767
BtgI CCRYGG 1 cut(s) 633
BtgZI GCGATG 1 cut(s) 1136
BtrI CACGTC 1 cut(s) 706
BtsCI GGATG 2 cut(s) 650, 1111
BtsIMutI CAGTG 1 cut(s) 405
BveI ACCTGC 2 cut(s) 143, 1282
Cac8I GCNNGC 5 cut(s) 126, 382, 487, 851, 865
CfoI GCGC 1 cut(s) 1118
Cfr10I RCCGGY 1 cut(s) 767
Cfr13I GGNCC 3 cut(s) 197, 1059, 1148
CseI GACGC 2 cut(s) 562, 1262
Csp6I GTAC 3 cut(s) 185, 640, 826
CviAII CATG 4 cut(s) 201, 301, 621, 1170
CviQI GTAC 3 cut(s) 185, 640, 826
DdeI CTNAG 7 cut(s) 326, 581, 610, 881, 955, 1181, 1353
DpnI GATC 4 cut(s) 324, 522, 1046, 1323
DpnII GATC 4 cut(s) 322, 520, 1044, 1321
EaeI YGGCCR 1 cut(s) 765
EagI CGGCCG 1 cut(s) 765
Ecl136II GAGCTC 2 cut(s) 954, 1159
EclXI CGGCCG 1 cut(s) 765
Eco130I CCWWGG 2 cut(s) 69, 373
Eco24I GRGCYC 3 cut(s) 513, 956, 1161
Eco31I GGTCTC 1 cut(s) 785
Eco47I GGWCC 2 cut(s) 1059, 1148
Eco52I CGGCCG 1 cut(s) 765
Eco53kI GAGCTC 2 cut(s) 954, 1159
Eco88I CYCGRG 1 cut(s) 949
Eco91I GGTNACC 2 cut(s) 340, 875
EcoICRI GAGCTC 2 cut(s) 954, 1159
EcoO65I GGTNACC 2 cut(s) 340, 875
EcoRII CCWGG 2 cut(s) 36, 1036
EcoT14I CCWWGG 2 cut(s) 69, 373
EcoT22I ATGCAT 1 cut(s) 1111
EcoT38I GRGCYC 3 cut(s) 513, 956, 1161
ErhI CCWWGG 2 cut(s) 69, 373
FaeI CATG 4 cut(s) 204, 304, 624, 1173
FalI AAGNNNNNCTT 2 cut(s) 674, 706
FaqI GGGAC 2 cut(s) 1054, 1072
FatI CATG 4 cut(s) 200, 300, 620, 1169
FauI CCCGC 3 cut(s) 264, 794, 1095
FblI GTMKAC 3 cut(s) 772, 1091, 1269
Fnu4HI GCNGC 5 cut(s) 139, 730, 733, 915, 1119
FokI GGATG 2 cut(s) 637, 1118
FriOI GRGCYC 3 cut(s) 513, 956, 1161
Fsp4HI GCNGC 5 cut(s) 139, 730, 733, 915, 1119
FspBI CTAG 2 cut(s) 254, 1163
GlaI GCGC 1 cut(s) 1117
GluI GCNGC 5 cut(s) 139, 730, 733, 915, 1119
GsaI CCCAGC 1 cut(s) 1314
HaeIII GGCC 3 cut(s) 199, 530, 767
HapII CCGG 9 cut(s) 292, 447, 768, 1056, 1145, 1151, 1260, 1389, 1413
HgaI GACGC 2 cut(s) 562, 1262
HhaI GCGC 1 cut(s) 1118
Hin1II CATG 4 cut(s) 204, 304, 624, 1173
Hin6I GCGC 1 cut(s) 1116
HinP1I GCGC 1 cut(s) 1116
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HindIII AAGCTT 1 cut(s) 451
HinfI GANTC 6 cut(s) 83, 238, 466, 647, 1052, 1398
HpaII CCGG 9 cut(s) 292, 447, 768, 1056, 1145, 1151, 1260, 1389, 1413
HphI GGTGA 5 cut(s) 85, 334, 406, 1166, 1210
Hpy166II GTNNAC 8 cut(s) 187, 277, 640, 773, 994, 1083, 1092, 1270
Hpy188I TCNGA 5 cut(s) 337, 890, 958, 1209, 1403
Hpy188III TCNNGA 6 cut(s) 176, 254, 352, 806, 1071, 1345
Hpy8I GTNNAC 8 cut(s) 187, 277, 640, 773, 994, 1083, 1092, 1270
Hpy99I CGWCG 2 cut(s) 707, 1235
HpyAV CCTTC 3 cut(s) 160, 740, 1042
HpyCH4III ACNGT 3 cut(s) 103, 400, 1063
HpyCH4IV ACGT 3 cut(s) 390, 705, 1383
HpyCH4V TGCA 6 cut(s) 138, 380, 495, 732, 863, 1109
HpyF10VI GCNNNNNNNGC 4 cut(s) 570, 911, 1094, 1115
HpyF3I CTNAG 7 cut(s) 326, 581, 610, 881, 955, 1181, 1353
HpySE526I ACGT 3 cut(s) 390, 705, 1383
Hsp92II CATG 4 cut(s) 204, 304, 624, 1173
HspAI GCGC 1 cut(s) 1116
Kzo9I GATC 4 cut(s) 322, 520, 1044, 1321
LmnI GCTCC 5 cut(s) 508, 890, 902, 1164, 1414
Lsp1109I GCAGC 5 cut(s) 150, 716, 744, 901, 1130
LweI GCATC 4 cut(s) 179, 461, 993, 1096
MaeI CTAG 2 cut(s) 254, 1163
MaeII ACGT 3 cut(s) 390, 705, 1383
MaeIII GTNAC 5 cut(s) 155, 340, 394, 875, 1237
MalI GATC 4 cut(s) 324, 522, 1046, 1323
MbiI CCGCTC 2 cut(s) 114, 433
MboI GATC 4 cut(s) 322, 520, 1044, 1321
MboII GAAGA 2 cut(s) 829, 1372
MflI RGATCY 1 cut(s) 322
MhlI GDGCHC 6 cut(s) 50, 413, 513, 895, 956, 1161
MluCI AATT 8 cut(s) 7, 89, 249, 305, 596, 1011, 1247, 1263
MlyI GAGTC 3 cut(s) 460, 641, 1046
MmeI TCCRAC 1 cut(s) 601
Mph1103I ATGCAT 1 cut(s) 1111
MseI TTAA 1 cut(s) 692
MslI CAYNNNNRTG 3 cut(s) 192, 974, 989
MspI CCGG 9 cut(s) 292, 447, 768, 1056, 1145, 1151, 1260, 1389, 1413
MspR9I CCNGG 7 cut(s) 38, 292, 1038, 1057, 1146, 1152, 1413
MvaI CCWGG 2 cut(s) 38, 1038
MvnI CGCG 1 cut(s) 1116
MwoI GCNNNNNNNGC 4 cut(s) 570, 911, 1094, 1115
NciI CCSGG 5 cut(s) 292, 1057, 1146, 1152, 1413
NdeII GATC 4 cut(s) 322, 520, 1044, 1321
NlaIII CATG 4 cut(s) 204, 304, 624, 1173
NlaIV GGNNCC 4 cut(s) 510, 719, 1060, 1149
NmeAIII GCCGAG 1 cut(s) 506
NmuCI GTSAC 2 cut(s) 340, 394
NsiI ATGCAT 1 cut(s) 1111
NspI RCATGY 2 cut(s) 624, 1173
PaeR7I CTCGAG 1 cut(s) 949
PasI CCCWGGG 1 cut(s) 1037
PcsI WCGNNNNNNNCGW 2 cut(s) 708, 894
PfeI GAWTC 3 cut(s) 83, 238, 1398
PflFI GACNNNGTC 1 cut(s) 572
PfoI TCCNGGA 2 cut(s) 290, 1055
PkrI GCNGC 5 cut(s) 140, 731, 734, 916, 1120
PleI GAGTC 3 cut(s) 460, 641, 1046
PpsI GAGTC 3 cut(s) 460, 641, 1046
Ppu21I YACGTR 1 cut(s) 391
PshAI GACNNNNGTC 1 cut(s) 1078
Psp124BI GAGCTC 2 cut(s) 956, 1161
Psp6I CCWGG 2 cut(s) 36, 1036
PspEI GGTNACC 2 cut(s) 340, 875
PspFI CCCAGC 1 cut(s) 1310
PspGI CCWGG 2 cut(s) 36, 1036
PspN4I GGNNCC 4 cut(s) 510, 719, 1060, 1149
PspPI GGNCC 3 cut(s) 197, 1059, 1148
PspXI VCTCGAGB 1 cut(s) 949
PstI CTGCAG 2 cut(s) 140, 734
PsuI RGATCY 1 cut(s) 322
PsyI GACNNNGTC 1 cut(s) 572
RsaI GTAC 3 cut(s) 186, 641, 827
RsaNI GTAC 3 cut(s) 185, 640, 826
RseI CAYNNNNRTG 3 cut(s) 192, 974, 989
SacI GAGCTC 2 cut(s) 956, 1161
SaqAI TTAA 1 cut(s) 692
SatI GCNGC 5 cut(s) 139, 730, 733, 915, 1119
Sau3AI GATC 4 cut(s) 322, 520, 1044, 1321
Sau96I GGNCC 3 cut(s) 197, 1059, 1148
SchI GAGTC 3 cut(s) 460, 641, 1046
ScrFI CCNGG 7 cut(s) 38, 292, 1038, 1057, 1146, 1152, 1413
SduI GDGCHC 6 cut(s) 50, 413, 513, 895, 956, 1161
SfaNI GCATC 4 cut(s) 179, 461, 993, 1096
SfcI CTRYAG 2 cut(s) 136, 730
Sfr274I CTCGAG 1 cut(s) 949
SinI GGWCC 2 cut(s) 1059, 1148
SlaI CTCGAG 1 cut(s) 949
SmiMI CAYNNNNRTG 3 cut(s) 192, 974, 989
SmlI CTYRAG 1 cut(s) 949
SmoI CTYRAG 1 cut(s) 949
Sse9I AATT 8 cut(s) 7, 89, 249, 305, 596, 1011, 1247, 1263
SsiI CCGC 8 cut(s) 112, 271, 431, 787, 816, 832, 1095, 1102
SspMI CTAG 2 cut(s) 254, 1163
SstI GAGCTC 2 cut(s) 956, 1161
StyD4I CCNGG 7 cut(s) 36, 290, 1036, 1055, 1144, 1150, 1411
StyI CCWWGG 2 cut(s) 69, 373
TaaI ACNGT 3 cut(s) 103, 400, 1063
TaiI ACGT 3 cut(s) 393, 708, 1386
TaqI TCGA 5 cut(s) 469, 519, 711, 950, 1050
TasI AATT 8 cut(s) 7, 89, 249, 305, 596, 1011, 1247, 1263
TatI WGTACW 1 cut(s) 825
TfiI GAWTC 3 cut(s) 83, 238, 1398
Tru1I TTAA 1 cut(s) 692
Tru9I TTAA 1 cut(s) 692
TscAI CASTG 1 cut(s) 405
TseFI GTSAC 2 cut(s) 340, 394
TseI GCWGC 5 cut(s) 138, 729, 732, 914, 1118
Tsp45I GTSAC 2 cut(s) 340, 394
TspDTI ATGAA 3 cut(s) 95, 317, 742
TspGWI ACGGA 3 cut(s) 657, 1011, 1125
TspRI CASTG 1 cut(s) 405
Tth111I GACNNNGTC 1 cut(s) 572
VpaK11BI GGWCC 2 cut(s) 1059, 1148
XapI RAATTY 4 cut(s) 7, 89, 249, 596
XbaI TCTAGA 1 cut(s) 253
XceI RCATGY 2 cut(s) 624, 1173
XcmI CCANNNNNNNNNTGG 1 cut(s) 482
XhoI CTCGAG 1 cut(s) 949
XmiI GTMKAC 3 cut(s) 772, 1091, 1269
XspI CTAG 2 cut(s) 254, 1163
Zsp2I ATGCAT 1 cut(s) 1111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.