Rh1DG037400

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
OG0000845
Physical Location & Seq
Forward (+)
6044282 .. 6047455
3174 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG037400.1

Sequence Viewer

Length: 1452 bp
ATGGCAACTCCCAGTGTTCATTCTGGCTACTCCTTCCTCGCTAACAAGTACTTGATTTCCTTTTGTGTATTTGTATGCGTTAATATTCTCTCTTCTCTGGACAAGGGCTTCGCTTTGAGTACTCATCACACAGATGTTCAACTCAGCTCTCTACTACCAGCATCGACCTGCAGCCCCTCTACCAGAGGTCATGATAAGAAGAAGGCATCACTTAAAGTGGTACACAGGCATGGTCCATGCTCTGAGAAGTCCAAGCCTAACCAATACAAGACCACAACTCCAACTCACACTCAGATCCTCCAGCAGGACCAAGCTCGAGTCGACTCAATCCACGCCCGGAAGGGTGACAACCTAAGGCAAACCGACGCATCCATCCCCGCCAAGTCCGGCAGAGTAGTGGGCTCAGCAAACTACATTGTGACCGTGGGCTTGGGCTCACCCGCAAAACAACTCTCGCTCATATTTGACACCGGGAGTGACCTCACTTGGACGCAGTGTCGGCCTTGTGTCAAGTATTGTTACAAACAGAAGGAGCCCATCTTTGACCCATCCCTCTCCAAATCGTATACCAACATATCCTGTAATTCGCCAGTCTGCTCTCAACTCAAATCAGCCACAGGCATCACACCTGGTTGCTCAAGCGGCACATCGACTTGCATATACGGCATACAATACGGAGATAAGTCCTTCTCCATAGGATACTTTAGTAAAGAAAGGTTGACACTAACGTCAACGGACTATTTCGACGGGTTTCTCTTCGGCTGTGGCCAAAACAATCAAGGCCTTTTTAACGGATCTGCAGGGTTATTGGGCCTGGGTCGCAACAAAATCTCCCTCGTCGAACAGAGCGCGCAAAAGTACGGCCGCTTCTTCTCCTATTGCCTACCCTCAACTTCCAGCGCCACTGGTTACCTCAGCTTCGGAAAAGGCGACGGACCCTCCAATGCCGTCAAGTTCACGCCGCTATCCACTGTATCTAAAGGTGGGTCCTTTTACGGCCTAGATGTTGTTGGAATCGATGTCGGCGGACGTCGGGTATCGATTCCAGCTTCAGTGTTTTCGTCCTCAGGGACGATCATCGACTCAGGGACGGTGATAACACGGCTTCCGGCAACAGCGTACAGCGCTTTGAGGGATGCGTTTAAGCAAGGAATGAAAAGCTATCCGCAAGCTAAGGAGTTTTCAATATTTGACACGTGCTACGACCTGAGCAGGACCAGCACAGTGTCGTATCCTAAAATAGCCTTCGCTTTCAGCGGTGGGTTGATGTTGGATTTGGATGCGACGGGCATATTTTACGTGGTCAGTGCTTCGCAGGTGTGCTTGGCGTTCGCTGGGAACAGTAATGACCGCGACATTGCCATATTTGGGAATGTTCAACAGAAACGGTTGCAGGTGGTGTATGACGTCGCTGGTGGAAAGGTTGGATTTGCCCCTGCTGGTTGCCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

483

Amino Acids

51.58

Weight (kDa)

9.16

Isoelectric Point (pI)

31.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 137 - 480 8.5e-22 Eukaryotic aspartyl protease
TAXi_N PF14543 138 - 309 4.1e-54 Xylanase inhibitor N-terminal
TAXi_C PF14541 332 - 478 8.4e-30 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1306, 1384
AasI GACNNNNNNGTC 1 cut(s) 727
AatII GACGTC 2 cut(s) 1033, 1410
Acc36I ACCTGC 3 cut(s) 176, 1306, 1384
AccI GTMKAC 2 cut(s) 321, 566
AccII CGCG 2 cut(s) 851, 1353
AciI CCGC 9 cut(s) 378, 441, 642, 865, 962, 1026, 1166, 1257, 1351
AclWI GGATC 2 cut(s) 289, 802
AcoI YGGCCR 2 cut(s) 766, 862
AcuI CTGAAG 1 cut(s) 1035
AcvI CACGTG 1 cut(s) 1197
AcyI GRCGYC 2 cut(s) 1030, 1407
AfaI GTAC 5 cut(s) 50, 121, 222, 860, 1121
AfeI AGCGCT 1 cut(s) 1126
AfiI CCNNNNNNNGG 2 cut(s) 304, 1368
AflIII ACRYGT 1 cut(s) 1194
AgsI TTSAA 3 cut(s) 140, 1185, 1379
AhdI GACNNNNNGTC 1 cut(s) 495
AjnI CCWGG 2 cut(s) 628, 813
AluBI AGCT 6 cut(s) 147, 314, 918, 1049, 1161, 1172
AluI AGCT 6 cut(s) 147, 314, 918, 1049, 1161, 1172
AlwI GGATC 2 cut(s) 289, 802
Ama87I CYCGRG 1 cut(s) 315
Aor51HI AGCGCT 1 cut(s) 1126
AoxI GGCC 6 cut(s) 500, 766, 781, 811, 862, 997
ApeKI GCWGC 1 cut(s) 171
ArsI GACNNNNNNTTYG 2 cut(s) 92, 124
AspLEI GCGC 4 cut(s) 851, 853, 902, 1127
AspS9I GGNCC 6 cut(s) 233, 307, 811, 935, 987, 1215
AsuC2I CCSGG 2 cut(s) 337, 472
AsuHPI GGTGA 3 cut(s) 356, 429, 1105
AvaI CYCGRG 1 cut(s) 315
AvaII GGWCC 5 cut(s) 233, 307, 935, 987, 1215
AxyI CCTNAGG 2 cut(s) 353, 1066
BaeI ACNNNNGTAYC 2 cut(s) 691, 724
BalI TGGCCA 1 cut(s) 768
BanII GRGCYC 3 cut(s) 404, 437, 537
BarI GAAGNNNNNNTAC 2 cut(s) 851, 883
BbrPI CACGTG 1 cut(s) 1197
BbvCI CCTCAGC 1 cut(s) 914
BbvI GCAGC 1 cut(s) 183
BccI CCATC 3 cut(s) 380, 545, 556
BceAI ACGGC 5 cut(s) 679, 877, 932, 1012, 1118
BciT130I CCWGG 2 cut(s) 630, 815
BciVI GTATCC 2 cut(s) 692, 1242
BcnI CCSGG 2 cut(s) 337, 472
BfaI CTAG 1 cut(s) 1001
BfmI CTRYAG 2 cut(s) 169, 798
BfoI RGCGCY 2 cut(s) 903, 1128
BfuAI ACCTGC 3 cut(s) 176, 1306, 1384
BfuI GTATCC 2 cut(s) 692, 1242
BisI GCNGC 4 cut(s) 172, 643, 865, 962
BlpI GCTNAGC 1 cut(s) 403
BlsI GCNGC 4 cut(s) 173, 644, 866, 963
BmcAI AGTACT 2 cut(s) 50, 121
Bme1390I CCNGG 4 cut(s) 337, 472, 630, 815
Bme18I GGWCC 5 cut(s) 233, 307, 935, 987, 1215
BmeRI GACNNNNNGTC 1 cut(s) 495
BmeT110I CYCGRG 1 cut(s) 315
BmgT120I GGNCC 6 cut(s) 233, 307, 811, 935, 987, 1215
BmiI GGNNCC 3 cut(s) 534, 937, 988
BmrFI CCNGG 4 cut(s) 337, 472, 630, 815
BmrI ACTGGG 1 cut(s) 6
BmsI GCATC 6 cut(s) 170, 215, 377, 630, 1126, 1270
BmuI ACTGGG 1 cut(s) 6
BpmI CTGGAG 1 cut(s) 284
Bpu10I CCTNAGC 3 cut(s) 914, 1173, 1208
Bpu1102I GCTNAGC 1 cut(s) 403
BpuEI CTTGAG 1 cut(s) 622
BpuMI CCSGG 2 cut(s) 337, 472
Bsa29I ATCGAT 2 cut(s) 1017, 1040
BsaAI YACGTR 2 cut(s) 1197, 1300
BsaHI GRCGYC 2 cut(s) 1030, 1407
BsaJI CCNNGG 2 cut(s) 423, 814
BsaXI ACNNNNNCTCC 6 cut(s) 262, 292, 815, 845, 923, 953
Bsc4I CCNNNNNNNGG 2 cut(s) 304, 1368
Bse1I ACTGG 3 cut(s) 12, 590, 910
Bse21I CCTNAGG 2 cut(s) 353, 1066
Bse3DI GCAATG 1 cut(s) 1356
BseBI CCWGG 2 cut(s) 630, 815
BseCI ATCGAT 2 cut(s) 1017, 1040
BseDI CCNNGG 2 cut(s) 423, 814
BseGI GGATG 5 cut(s) 368, 372, 548, 1141, 1285
BseLI CCNNNNNNNGG 2 cut(s) 304, 1368
BseMI GCAATG 1 cut(s) 1356
BseMII CTCAG 8 cut(s) 157, 234, 305, 417, 928, 1080, 1098, 1199
BseNI ACTGG 3 cut(s) 12, 590, 910
BsePI GCGCGC 1 cut(s) 849
BseX3I CGGCCG 1 cut(s) 862
BseXI GCAGC 1 cut(s) 183
BseYI CCCAGC 1 cut(s) 1334
Bsh1236I CGCG 2 cut(s) 851, 1353
Bsh1285I CGRYCG 1 cut(s) 865
BshFI GGCC 6 cut(s) 502, 768, 783, 813, 864, 999
BshVI ATCGAT 2 cut(s) 1017, 1040
BsiEI CGRYCG 1 cut(s) 865
BsiHKCI CYCGRG 1 cut(s) 315
BsiSI CCGG 4 cut(s) 337, 387, 471, 1109
BslFI GGGAC 2 cut(s) 1084, 1102
BslI CCNNNNNNNGG 2 cut(s) 304, 1368
BsmFI GGGAC 2 cut(s) 1084, 1102
BsnI GGCC 6 cut(s) 502, 768, 783, 813, 864, 999
BsoBI CYCGRG 1 cut(s) 315
Bsp1286I GDGCHC 3 cut(s) 404, 437, 537
Bsp143I GATC 3 cut(s) 294, 794, 1074
Bsp1720I GCTNAGC 1 cut(s) 403
BspACI CCGC 9 cut(s) 378, 441, 642, 865, 962, 1026, 1166, 1257, 1351
BspANI GGCC 6 cut(s) 502, 768, 783, 813, 864, 999
BspCNI CTCAG 8 cut(s) 156, 235, 304, 416, 927, 1079, 1097, 1200
BspDI ATCGAT 2 cut(s) 1017, 1040
BspFNI CGCG 2 cut(s) 851, 1353
BspHI TCATGA 1 cut(s) 190
BspLI GGNNCC 3 cut(s) 534, 937, 988
BspMAI CTGCAG 2 cut(s) 173, 802
BspMI ACCTGC 3 cut(s) 176, 1306, 1384
BspPI GGATC 2 cut(s) 289, 802
BsrDI GCAATG 1 cut(s) 1356
BsrI ACTGG 3 cut(s) 12, 590, 910
BssECI CCNNGG 2 cut(s) 423, 814
BssHII GCGCGC 1 cut(s) 849
BssMI GATC 3 cut(s) 294, 794, 1074
BssNAI GTATAC 1 cut(s) 567
BssNI GRCGYC 2 cut(s) 1030, 1407
Bst1107I GTATAC 1 cut(s) 567
Bst2UI CCWGG 2 cut(s) 630, 815
Bst4CI ACNGT 6 cut(s) 424, 973, 1093, 1225, 1343, 1389
Bst6I CTCTTC 2 cut(s) 97, 761
BstACI GRCGYC 2 cut(s) 1030, 1407
BstBAI YACGTR 2 cut(s) 1197, 1300
BstC8I GCNNGC 2 cut(s) 851, 1170
BstDSI CCRYGG 1 cut(s) 423
BstEII GGTNACC 1 cut(s) 908
BstENI CCTNNNNNAGG 1 cut(s) 302
BstF5I GGATG 5 cut(s) 368, 372, 548, 1141, 1285
BstFNI CGCG 2 cut(s) 851, 1353
BstH2I RGCGCY 2 cut(s) 903, 1128
BstHHI GCGC 4 cut(s) 851, 853, 902, 1127
BstKTI GATC 3 cut(s) 297, 797, 1077
BstMBI GATC 3 cut(s) 294, 794, 1074
BstMCI CGRYCG 1 cut(s) 865
BstMWI GCNNNNNNNGC 6 cut(s) 499, 642, 663, 819, 1124, 1218
BstNI CCWGG 2 cut(s) 630, 815
BstPI GGTNACC 1 cut(s) 908
BstSCI CCNGG 4 cut(s) 335, 470, 628, 813
BstSFI CTRYAG 2 cut(s) 169, 798
BstUI CGCG 2 cut(s) 851, 1353
BstV1I GCAGC 1 cut(s) 183
BstX2I RGATCY 2 cut(s) 294, 794
BstYI RGATCY 2 cut(s) 294, 794
BstZ17I GTATAC 1 cut(s) 567
BstZI CGGCCG 1 cut(s) 862
Bsu15I ATCGAT 2 cut(s) 1017, 1040
Bsu36I CCTNAGG 2 cut(s) 353, 1066
BsuI GTATCC 2 cut(s) 692, 1242
BsuRI GGCC 6 cut(s) 502, 768, 783, 813, 864, 999
BsuTUI ATCGAT 2 cut(s) 1017, 1040
BtgI CCRYGG 1 cut(s) 423
BtsCI GGATG 5 cut(s) 368, 372, 548, 1141, 1285
BtsI GCAGTG 1 cut(s) 500
BtsIMutI CAGTG 7 cut(s) 19, 500, 903, 969, 1059, 1230, 1312
BveI ACCTGC 3 cut(s) 176, 1306, 1384
Cac8I GCNNGC 2 cut(s) 851, 1170
CciI TCATGA 1 cut(s) 190
CfoI GCGC 4 cut(s) 851, 853, 902, 1127
Cfr13I GGNCC 6 cut(s) 233, 307, 811, 935, 987, 1215
ClaI ATCGAT 2 cut(s) 1017, 1040
CseI GACGC 2 cut(s) 374, 499
CsiI ACCWGGT 1 cut(s) 628
Csp6I GTAC 5 cut(s) 49, 120, 221, 859, 1120
CviAII CATG 3 cut(s) 191, 230, 237
CviQI GTAC 5 cut(s) 49, 120, 221, 859, 1120
DpnI GATC 3 cut(s) 296, 796, 1076
DpnII GATC 3 cut(s) 294, 794, 1074
DrdI GACNNNNNNGTC 1 cut(s) 727
DriI GACNNNNNGTC 1 cut(s) 495
DseDI GACNNNNNNGTC 1 cut(s) 727
EaeI YGGCCR 2 cut(s) 766, 862
EagI CGGCCG 1 cut(s) 862
Eam1104I CTCTTC 2 cut(s) 97, 761
Eam1105I GACNNNNNGTC 1 cut(s) 495
EarI CTCTTC 2 cut(s) 97, 761
EciI GGCGGA 1 cut(s) 1041
EclXI CGGCCG 1 cut(s) 862
Eco147I AGGCCT 1 cut(s) 783
Eco24I GRGCYC 3 cut(s) 404, 437, 537
Eco47I GGWCC 5 cut(s) 233, 307, 935, 987, 1215
Eco47III AGCGCT 1 cut(s) 1126
Eco52I CGGCCG 1 cut(s) 862
Eco57I CTGAAG 1 cut(s) 1035
Eco72I CACGTG 1 cut(s) 1197
Eco81I CCTNAGG 2 cut(s) 353, 1066
Eco88I CYCGRG 1 cut(s) 315
Eco91I GGTNACC 1 cut(s) 908
EcoNI CCTNNNNNAGG 1 cut(s) 302
EcoO109I RGGNCCY 1 cut(s) 987
EcoO65I GGTNACC 1 cut(s) 908
EcoRII CCWGG 2 cut(s) 628, 813
EcoT38I GRGCYC 3 cut(s) 404, 437, 537
FaeI CATG 3 cut(s) 194, 233, 240
FaqI GGGAC 2 cut(s) 1084, 1102
FatI CATG 3 cut(s) 190, 229, 236
FauI CCCGC 2 cut(s) 385, 448
FblI GTMKAC 2 cut(s) 321, 566
Fnu4HI GCNGC 4 cut(s) 172, 643, 865, 962
FokI GGATG 5 cut(s) 355, 359, 535, 1148, 1292
FriOI GRGCYC 3 cut(s) 404, 437, 537
Fsp4HI GCNGC 4 cut(s) 172, 643, 865, 962
FspBI CTAG 1 cut(s) 1001
GlaI GCGC 4 cut(s) 850, 852, 901, 1126
GluI GCNGC 4 cut(s) 172, 643, 865, 962
GsaI CCCAGC 1 cut(s) 1338
GsuI CTGGAG 1 cut(s) 284
HaeII RGCGCY 2 cut(s) 903, 1128
HaeIII GGCC 6 cut(s) 502, 768, 783, 813, 864, 999
HapII CCGG 4 cut(s) 337, 387, 471, 1109
HgaI GACGC 2 cut(s) 374, 499
HhaI GCGC 4 cut(s) 851, 853, 902, 1127
Hin1I GRCGYC 2 cut(s) 1030, 1407
Hin1II CATG 3 cut(s) 194, 233, 240
Hin6I GCGC 4 cut(s) 849, 851, 900, 1125
HinP1I GCGC 4 cut(s) 849, 851, 900, 1125
HincII GTYRAC 3 cut(s) 322, 720, 732
HindII GTYRAC 3 cut(s) 322, 720, 732
HinfI GANTC 5 cut(s) 318, 323, 1014, 1042, 1082
HpaII CCGG 4 cut(s) 337, 387, 471, 1109
HphI GGTGA 3 cut(s) 356, 429, 1105
Hpy166II GTNNAC 6 cut(s) 223, 322, 567, 720, 732, 957
Hpy188I TCNGA 3 cut(s) 244, 294, 923
Hpy188III TCNNGA 2 cut(s) 98, 191
Hpy8I GTNNAC 6 cut(s) 223, 322, 567, 720, 732, 957
Hpy99I CGWCG 7 cut(s) 368, 749, 842, 935, 1035, 1288, 1412
HpyAV CCTTC 6 cut(s) 43, 196, 334, 523, 697, 1255
HpyCH4III ACNGT 6 cut(s) 424, 973, 1093, 1225, 1343, 1389
HpyCH4IV ACGT 5 cut(s) 728, 1030, 1196, 1299, 1407
HpyCH4V TGCA 4 cut(s) 171, 657, 800, 1393
HpyF10VI GCNNNNNNNGC 6 cut(s) 499, 642, 663, 819, 1124, 1218
HpySE526I ACGT 5 cut(s) 728, 1030, 1196, 1299, 1407
Hsp92I GRCGYC 2 cut(s) 1030, 1407
Hsp92II CATG 3 cut(s) 194, 233, 240
HspAI GCGC 4 cut(s) 849, 851, 900, 1125
Kzo9I GATC 3 cut(s) 294, 794, 1074
LmnI GCTCC 1 cut(s) 532
Lsp1109I GCAGC 1 cut(s) 183
LweI GCATC 6 cut(s) 170, 215, 377, 630, 1126, 1270
MabI ACCWGGT 1 cut(s) 628
MaeI CTAG 1 cut(s) 1001
MaeII ACGT 5 cut(s) 728, 1030, 1196, 1299, 1407
MaeIII GTNAC 5 cut(s) 344, 418, 476, 518, 908
MalI GATC 3 cut(s) 296, 796, 1076
MboI GATC 3 cut(s) 294, 794, 1074
MboII GAAGA 4 cut(s) 84, 211, 748, 862
MflI RGATCY 2 cut(s) 294, 794
MhlI GDGCHC 3 cut(s) 404, 437, 537
MlsI TGGCCA 1 cut(s) 768
MluCI AATT 1 cut(s) 583
MluNI TGGCCA 1 cut(s) 768
MlyI GAGTC 3 cut(s) 317, 327, 1076
MmeI TCCRAC 4 cut(s) 305, 991, 1251, 1405
Mox20I TGGCCA 1 cut(s) 768
MscI TGGCCA 1 cut(s) 768
MseI TTAA 4 cut(s) 81, 213, 789, 1143
MslI CAYNNNNRTG 2 cut(s) 132, 228
Msp20I TGGCCA 1 cut(s) 768
MspA1I CMGCKG 1 cut(s) 1257
MspI CCGG 4 cut(s) 337, 387, 471, 1109
MspR9I CCNGG 4 cut(s) 337, 472, 630, 815
MvaI CCWGG 2 cut(s) 630, 815
MvnI CGCG 2 cut(s) 851, 1353
MwoI GCNNNNNNNGC 6 cut(s) 499, 642, 663, 819, 1124, 1218
NciI CCSGG 2 cut(s) 337, 472
NdeII GATC 3 cut(s) 294, 794, 1074
NlaIII CATG 3 cut(s) 194, 233, 240
NlaIV GGNNCC 3 cut(s) 534, 937, 988
NmuCI GTSAC 3 cut(s) 344, 418, 476
PaeR7I CTCGAG 1 cut(s) 315
PagI TCATGA 1 cut(s) 190
PaqCI CACCTGC 2 cut(s) 1306, 1384
PauI GCGCGC 1 cut(s) 849
PceI AGGCCT 1 cut(s) 783
PcsI WCGNNNNNNNCGW 1 cut(s) 927
PfeI GAWTC 2 cut(s) 1014, 1042
PkrI GCNGC 4 cut(s) 173, 644, 866, 963
PleI GAGTC 3 cut(s) 317, 326, 1076
PmaCI CACGTG 1 cut(s) 1197
PmlI CACGTG 1 cut(s) 1197
PpsI GAGTC 3 cut(s) 317, 326, 1076
Ppu21I YACGTR 2 cut(s) 1197, 1300
PpuMI RGGWCCY 1 cut(s) 987
Psp5II RGGWCCY 1 cut(s) 987
Psp6I CCWGG 2 cut(s) 628, 813
PspCI CACGTG 1 cut(s) 1197
PspEI GGTNACC 1 cut(s) 908
PspFI CCCAGC 1 cut(s) 1334
PspGI CCWGG 2 cut(s) 628, 813
PspN4I GGNNCC 3 cut(s) 534, 937, 988
PspPI GGNCC 6 cut(s) 233, 307, 811, 935, 987, 1215
PspPPI RGGWCCY 1 cut(s) 987
PspXI VCTCGAGB 1 cut(s) 315
PstI CTGCAG 2 cut(s) 173, 802
PsuI RGATCY 2 cut(s) 294, 794
PteI GCGCGC 1 cut(s) 849
RsaI GTAC 5 cut(s) 50, 121, 222, 860, 1121
RsaNI GTAC 5 cut(s) 49, 120, 221, 859, 1120
RseI CAYNNNNRTG 2 cut(s) 132, 228
SalI GTCGAC 1 cut(s) 320
SaqAI TTAA 4 cut(s) 81, 213, 789, 1143
SatI GCNGC 4 cut(s) 172, 643, 865, 962
Sau3AI GATC 3 cut(s) 294, 794, 1074
Sau96I GGNCC 6 cut(s) 233, 307, 811, 935, 987, 1215
ScaI AGTACT 2 cut(s) 50, 121
SchI GAGTC 3 cut(s) 317, 327, 1076
ScrFI CCNGG 4 cut(s) 337, 472, 630, 815
SduI GDGCHC 3 cut(s) 404, 437, 537
SexAI ACCWGGT 1 cut(s) 628
SfaNI GCATC 6 cut(s) 170, 215, 377, 630, 1126, 1270
SfcI CTRYAG 2 cut(s) 169, 798
Sfr274I CTCGAG 1 cut(s) 315
SinI GGWCC 5 cut(s) 233, 307, 935, 987, 1215
SlaI CTCGAG 1 cut(s) 315
SmiMI CAYNNNNRTG 2 cut(s) 132, 228
SmlI CTYRAG 2 cut(s) 315, 637
SmoI CTYRAG 2 cut(s) 315, 637
Sse9I AATT 1 cut(s) 583
SseBI AGGCCT 1 cut(s) 783
SsiI CCGC 9 cut(s) 378, 441, 642, 865, 962, 1026, 1166, 1257, 1351
SspI AATATT 2 cut(s) 85, 1188
SspMI CTAG 1 cut(s) 1001
StuI AGGCCT 1 cut(s) 783
StyD4I CCNGG 4 cut(s) 335, 470, 628, 813
TaaI ACNGT 6 cut(s) 424, 973, 1093, 1225, 1343, 1389
TaiI ACGT 5 cut(s) 731, 1033, 1199, 1302, 1410
TaqI TCGA 9 cut(s) 164, 316, 321, 650, 744, 840, 1017, 1040, 1080
TasI AATT 1 cut(s) 583
TatI WGTACW 2 cut(s) 48, 119
TauI GCSGC 3 cut(s) 645, 867, 964
TfiI GAWTC 2 cut(s) 1014, 1042
Tru1I TTAA 4 cut(s) 81, 213, 789, 1143
Tru9I TTAA 4 cut(s) 81, 213, 789, 1143
TscAI CASTG 7 cut(s) 19, 500, 910, 976, 1059, 1230, 1312
TseFI GTSAC 3 cut(s) 344, 418, 476
TseI GCWGC 1 cut(s) 171
Tsp45I GTSAC 3 cut(s) 344, 418, 476
TspDTI ATGAA 2 cut(s) 8, 1169
TspGWI ACGGA 4 cut(s) 690, 749, 807, 948
TspRI CASTG 7 cut(s) 19, 500, 910, 976, 1059, 1230, 1312
VpaK11BI GGWCC 5 cut(s) 233, 307, 935, 987, 1215
XagI CCTNNNNNAGG 1 cut(s) 302
XhoI CTCGAG 1 cut(s) 315
XmiI GTMKAC 2 cut(s) 321, 566
XspI CTAG 1 cut(s) 1001
ZraI GACGTC 2 cut(s) 1031, 1408
ZrmI AGTACT 2 cut(s) 50, 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.