Rh4DG105800

Belongs to the peptidase A1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4D
OG0000845
Physical Location & Seq
Forward (+)
16299849 .. 16315790
15942 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4DG105800.1

Sequence Viewer

Length: 1803 bp
ATGAGGAATTTCATCGGTTTGTCTCTACTTCTATGCCTAACTCTCTGCTCTTTGGACAAAGGCTTTGCCTTGGCAGAAGCAGATACCCACACAGTTGATCTCCGTTCTCTATTGCCAGCAACAACCTGCAGCCCCTCCACCAAAGGTAATAAGAGGAAGGCATCTCTTGAAGTGGTACACAAGCATGGGCCATGCTCTCATCTCGCTCAACACAAAGCAACTGCTACGAATCACACTCAAATTCTAGAGCAAGACCAAGTGCGAGTGAACTCAATCAACTCCCGAATTTTGAAGAAATTGAACGGCAACGAGGTTCTAAGCCAATCGAAGGCCACCACCCTCCCGGCCCGATGGGCTACCAGCCAAGGTGCAAGCAACTACGTGGTGACGGTAGGATTGGGCACACCTAACAAACCACTTTCGCTTGTATTTGACACCGGAAGCTATCTCACTTGGACTCAATGCCAACCTTGTGCTGGCTCTTGCTACCCACAAAAGGAGCCCATTTTCGACCCCTCAGCCTCCACCTCATATACCAACATTTCCTGTAATAGCACAGACTGCATCCAACTCAGGACAAGTACAAAATTCAACAAATGCTTAGCAGACACATGCTTATACGCCTTGGTGTATGGAGACTCATCCTACACCATTGGATTATTCGCCACAGACAAGCTGACCTTAACTCCAAACGACGTGTTTGATGGGTTCTTCTTTGGCTGCGGCCAACAAAACGAAGGCTTCATCAATGGTACGGCCGGTATACTTGGTCTCTCCCGCAACAAGTTCTCCATCATTGAACAAACCATACAAAAGTACAACCGCTTCTTCTCCTACTGTCTGCCACCAACCGCAAGCTCTATTGGATACCTCAGCTTCGGCGCACCTGATGGAGCTTCCAATACTGCTGTAAAATACACACGGCTCACTACTTTATCCTTGAGCTCAGATTTTTACGGCATAGACGTGGCTGGTATCAATGTGAACGGAAAAAAGCTCTCAATTCCTGCTTCAGTGTTTTCATCCCCGGGGACGATCATCGACTCTGGGACCGTCATCTCGCGACTGCCGTCCACAGCGTATACCGCTTTGCGGGATGCATTTCGGGCAGCGATGACAAGCTATCCGTTAGTTCCGGGACCGGGTGAGCTCCTAGATACATGCTATGACCTTAGTAGCTATCCAACGGTGACGTATCCGAAAATAGAGTTTGTGTTCGGCGACGGGGTTACGTTGGAATTGGACGCAACCGGAATTGTCTACTTTCTCAACGGTTTGAAGCAGGTTTGCTTGGCTTTTGCCGGGAATGATGATGCTAATGACATTGCGATTTTCGGGAATACTCAGCAGAAGAATATGGAGGTCAAGCTATTGGAGAAGCTATCACATGTGCAGTCCCTTTGCATTCATGAGATGATAGTGCGAGCTTTTAAGCACATACTTCAGGCAGTGATTGCTGCTGTTAATAACACTGAGAAAATGGCTGCCTCGATTGCTGCTGCATTGAATCTTATGTTGGGGGCTCCAGAAAATGAAGAATTCAATAAATGGCTGGAAGTATTCTTGCGAAAGAGATATGGATGGGATGTTTGCAGCTTCAACTACAATGATGTGAGGAGATTTGCGATTCTAGGTGGCCTGTGTCATAAGGTGGGCATTGAGATGGTTCCACGAGATTTTGATATGGAGTCTCCAAATCCATTTCAGAGTTCTGATATTGTCAGCTTAGTTCCAATACATAAGCAAGCTGCATGCTCTTCGGCAGATGGTAGGAACTATTGGAGTCATCAAAAACAGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04071 ko04140 ko04142 ko04210 ko04915 ko05152 map04071 map04140 map04142 map04210 map04915 map05152
Pfam Domains
Protein Families
TAXi_C TAXi_N

Protein Analysis

600

Amino Acids

65.42

Weight (kDa)

7.46

Isoelectric Point (pI)

38.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Asp PF00026 126 - 448 1.4e-19 Eukaryotic aspartyl protease
TAXi_N PF14543 127 - 294 2.7e-49 Xylanase inhibitor N-terminal
TAXi_C PF14541 319 - 455 1.9e-22 Xylanase inhibitor C-terminal
eIF3_p135 PF12807 451 - 515 2.6e-09 Translation initiation factor eIF3 subunit 135
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 134, 1273
AccI GTMKAC 3 cut(s) 763, 1082, 1260
AccII CGCG 1 cut(s) 1063
AciI CCGC 6 cut(s) 723, 778, 823, 852, 1086, 1093
AcoI YGGCCR 2 cut(s) 724, 756
AcsI RAATTY 5 cut(s) 7, 240, 285, 587, 1538
AcuI CTGAAG 2 cut(s) 996, 1427
AfaI GTAC 4 cut(s) 177, 583, 754, 818
AfiI CCNNNNNNNGG 5 cut(s) 328, 476, 496, 1092, 1142
AflIII ACRYGT 2 cut(s) 696, 1387
AgsI TTSAA 9 cut(s) 170, 292, 301, 592, 800, 1279, 1507, 1543, 1600
AjiI CACGTC 2 cut(s) 697, 967
AjuI GAANNNNNNNTTGG 2 cut(s) 1499, 1531
Alw21I GWGCWC 2 cut(s) 947, 1152
Alw26I GTCTC 4 cut(s) 27, 630, 776, 1695
Ama87I CYCGRG 1 cut(s) 1027
AoxI GGCC 6 cut(s) 188, 330, 345, 724, 756, 1636
ApeKI GCWGC 9 cut(s) 129, 720, 1109, 1457, 1484, 1496, 1499, 1593, 1748
ApoI RAATTY 5 cut(s) 7, 240, 285, 587, 1538
ArsI GACNNNNNNTTYG 2 cut(s) 47, 79
AspLEI GCGC 1 cut(s) 884
AspS9I GGNCC 4 cut(s) 188, 346, 1050, 1139
AsuC2I CCSGG 6 cut(s) 344, 1028, 1029, 1137, 1143, 1303
AsuHPI GGTGA 3 cut(s) 397, 1157, 1201
AvaI CYCGRG 1 cut(s) 1027
AvaII GGWCC 2 cut(s) 1050, 1139
BaeGI GKGCMC 1 cut(s) 404
BanII GRGCYC 4 cut(s) 504, 947, 1152, 1525
BarI GAAGNNNNNNTAC 2 cut(s) 809, 841
BauI CACGAG 1 cut(s) 1671
Bbv12I GWGCWC 2 cut(s) 947, 1152
BbvCI CCTCAGC 2 cut(s) 517, 872
BbvI GCAGC 9 cut(s) 141, 707, 1121, 1444, 1471, 1483, 1486, 1605, 1735
BccI CCATC 7 cut(s) 345, 698, 800, 884, 1575, 1657, 1760
BceAI ACGGC 5 cut(s) 319, 771, 938, 973, 1054
BcgI CGANNNNNNTGC 2 cut(s) 1740, 1774
BciVI GTATCC 2 cut(s) 860, 1206
BcnI CCSGG 6 cut(s) 344, 1028, 1029, 1137, 1143, 1303
BcoDI GTCTC 4 cut(s) 27, 630, 776, 1695
BfaI CTAG 3 cut(s) 245, 1154, 1631
BfmI CTRYAG 1 cut(s) 127
BfuAI ACCTGC 2 cut(s) 134, 1273
BfuI GTATCC 2 cut(s) 860, 1206
BglI GCCNNNNNGGC 1 cut(s) 353
BlpI GCTNAGC 1 cut(s) 601
Bme1390I CCNGG 6 cut(s) 344, 1028, 1029, 1137, 1143, 1303
Bme18I GGWCC 2 cut(s) 1050, 1139
BmeT110I CYCGRG 1 cut(s) 1027
BmgBI CACGTC 2 cut(s) 697, 967
BmgT120I GGNCC 4 cut(s) 188, 346, 1050, 1139
BmiI GGNNCC 5 cut(s) 501, 1051, 1140, 1524, 1668
BmrFI CCNGG 6 cut(s) 344, 1028, 1029, 1137, 1143, 1303
BmsI GCATC 4 cut(s) 170, 573, 1087, 1303
BoxI GACNNNNGTC 1 cut(s) 1069
BpmI CTGGAG 1 cut(s) 1509
Bpu10I CCTNAGC 2 cut(s) 517, 872
Bpu1102I GCTNAGC 1 cut(s) 601
BpuEI CTTGAG 1 cut(s) 961
BpuMI CCSGG 6 cut(s) 344, 1028, 1029, 1137, 1143, 1303
BsaAI YACGTR 1 cut(s) 382
BsaI GGTCTC 1 cut(s) 776
BsaJI CCNNGG 6 cut(s) 69, 364, 624, 1026, 1027, 1028
BsaWI WCCGGW 2 cut(s) 437, 1250
BsaXI ACNNNNNCTCC 4 cut(s) 670, 700, 773, 803
Bsc4I CCNNNNNNNGG 5 cut(s) 328, 476, 496, 1092, 1142
Bse118I RCCGGY 1 cut(s) 758
Bse3DI GCAATG 1 cut(s) 1323
BseDI CCNNGG 6 cut(s) 69, 364, 624, 1026, 1027, 1028
BseGI GGATG 6 cut(s) 564, 641, 1022, 1102, 1586, 1591
BseLI CCNNNNNNNGG 5 cut(s) 328, 476, 496, 1092, 1142
BseMI GCAATG 1 cut(s) 1323
BseMII CTCAG 6 cut(s) 531, 586, 886, 960, 1358, 1464
BseRI GAGGAG 1 cut(s) 1630
BseSI GKGCMC 1 cut(s) 404
BseX3I CGGCCG 1 cut(s) 756
BseXI GCAGC 9 cut(s) 141, 707, 1121, 1444, 1471, 1483, 1486, 1605, 1735
BsgI GTGCAG 1 cut(s) 1412
Bsh1236I CGCG 1 cut(s) 1063
Bsh1285I CGRYCG 1 cut(s) 759
BshFI GGCC 6 cut(s) 190, 332, 347, 726, 758, 1638
BsiEI CGRYCG 1 cut(s) 759
BsiHKAI GWGCWC 2 cut(s) 947, 1152
BsiHKCI CYCGRG 1 cut(s) 1027
BsiSI CCGG 8 cut(s) 344, 438, 759, 1028, 1136, 1142, 1251, 1302
BslFI GGGAC 4 cut(s) 1045, 1063, 1152, 1381
BslI CCNNNNNNNGG 5 cut(s) 328, 476, 496, 1092, 1142
BsmAI GTCTC 4 cut(s) 27, 630, 776, 1695
BsmFI GGGAC 4 cut(s) 1045, 1063, 1152, 1381
BsmI GAATGC 1 cut(s) 1404
BsnI GGCC 6 cut(s) 190, 332, 347, 726, 758, 1638
Bso31I GGTCTC 1 cut(s) 776
BsoBI CYCGRG 1 cut(s) 1027
Bsp1286I GDGCHC 5 cut(s) 404, 504, 947, 1152, 1525
Bsp143I GATC 2 cut(s) 97, 1035
Bsp1720I GCTNAGC 1 cut(s) 601
Bsp68I TCGCGA 1 cut(s) 1063
BspACI CCGC 6 cut(s) 723, 778, 823, 852, 1086, 1093
BspANI GGCC 6 cut(s) 190, 332, 347, 726, 758, 1638
BspCNI CTCAG 6 cut(s) 530, 585, 885, 959, 1357, 1465
BspFNI CGCG 1 cut(s) 1063
BspHI TCATGA 1 cut(s) 1408
BspLI GGNNCC 5 cut(s) 501, 1051, 1140, 1524, 1668
BspMAI CTGCAG 1 cut(s) 131
BspMI ACCTGC 2 cut(s) 134, 1273
BspQI GCTCTTC 1 cut(s) 1762
BspTNI GGTCTC 1 cut(s) 776
BsrDI GCAATG 1 cut(s) 1323
BsrFI RCCGGY 1 cut(s) 758
BssAI RCCGGY 1 cut(s) 758
BssECI CCNNGG 6 cut(s) 69, 364, 624, 1026, 1027, 1028
BssMI GATC 2 cut(s) 97, 1035
BssNAI GTATAC 2 cut(s) 764, 1083
BssSI CACGAG 1 cut(s) 1671
BssT1I CCWWGG 3 cut(s) 69, 364, 624
Bst1107I GTATAC 2 cut(s) 764, 1083
Bst2BI CACGAG 1 cut(s) 1671
Bst4CI ACNGT 6 cut(s) 94, 391, 839, 1054, 1189, 1274
Bst6I CTCTTC 1 cut(s) 1762
BstAPI GCANNNNNTGC 2 cut(s) 561, 1454
BstBAI YACGTR 1 cut(s) 382
BstC8I GCNNGC 7 cut(s) 117, 373, 478, 856, 1425, 1746, 1753
BstF5I GGATG 6 cut(s) 564, 641, 1022, 1102, 1586, 1591
BstFNI CGCG 1 cut(s) 1063
BstHHI GCGC 1 cut(s) 884
BstKTI GATC 2 cut(s) 100, 1038
BstMAI GTCTC 4 cut(s) 27, 630, 776, 1695
BstMBI GATC 2 cut(s) 97, 1035
BstMCI CGRYCG 1 cut(s) 759
BstMWI GCNNNNNNNGC 6 cut(s) 353, 561, 1085, 1106, 1454, 1493
BstNSI RCATGY 4 cut(s) 615, 1164, 1391, 1755
BstPAI GACNNNNGTC 1 cut(s) 1069
BstSCI CCNGG 6 cut(s) 342, 1026, 1027, 1135, 1141, 1301
BstSFI CTRYAG 1 cut(s) 127
BstSLI GKGCMC 1 cut(s) 404
BstUI CGCG 1 cut(s) 1063
BstV1I GCAGC 9 cut(s) 141, 707, 1121, 1444, 1471, 1483, 1486, 1605, 1735
BstZ17I GTATAC 2 cut(s) 764, 1083
BstZI CGGCCG 1 cut(s) 756
BsuI GTATCC 2 cut(s) 860, 1206
BsuRI GGCC 6 cut(s) 190, 332, 347, 726, 758, 1638
BtgZI GCGATG 1 cut(s) 1127
BtrI CACGTC 2 cut(s) 697, 967
BtsCI GGATG 6 cut(s) 564, 641, 1022, 1102, 1586, 1591
BtsI GCAGTG 1 cut(s) 1455
BtsIMutI CAGTG 3 cut(s) 1020, 1455, 1470
BtuMI TCGCGA 1 cut(s) 1063
BveI ACCTGC 2 cut(s) 134, 1273
Cac8I GCNNGC 7 cut(s) 117, 373, 478, 856, 1425, 1746, 1753
CciI TCATGA 1 cut(s) 1408
CfoI GCGC 1 cut(s) 884
Cfr10I RCCGGY 1 cut(s) 758
Cfr13I GGNCC 4 cut(s) 188, 346, 1050, 1139
Cfr9I CCCGGG 1 cut(s) 1027
CseI GACGC 1 cut(s) 1253
Csp6I GTAC 4 cut(s) 176, 582, 753, 817
CviAII CATG 7 cut(s) 185, 192, 612, 1161, 1388, 1409, 1752
CviQI GTAC 4 cut(s) 176, 582, 753, 817
DpnI GATC 2 cut(s) 99, 1037
DpnII GATC 2 cut(s) 97, 1035
EaeI YGGCCR 2 cut(s) 724, 756
EagI CGGCCG 1 cut(s) 756
Eam1104I CTCTTC 1 cut(s) 1762
EarI CTCTTC 1 cut(s) 1762
Ecl136II GAGCTC 2 cut(s) 945, 1150
EclXI CGGCCG 1 cut(s) 756
Eco130I CCWWGG 3 cut(s) 69, 364, 624
Eco24I GRGCYC 4 cut(s) 504, 947, 1152, 1525
Eco31I GGTCTC 1 cut(s) 776
Eco47I GGWCC 2 cut(s) 1050, 1139
Eco52I CGGCCG 1 cut(s) 756
Eco53kI GAGCTC 2 cut(s) 945, 1150
Eco57I CTGAAG 2 cut(s) 996, 1427
Eco88I CYCGRG 1 cut(s) 1027
EcoICRI GAGCTC 2 cut(s) 945, 1150
EcoRI GAATTC 1 cut(s) 1538
EcoT14I CCWWGG 3 cut(s) 69, 364, 624
EcoT22I ATGCAT 1 cut(s) 1102
EcoT38I GRGCYC 4 cut(s) 504, 947, 1152, 1525
ErhI CCWWGG 3 cut(s) 69, 364, 624
FaeI CATG 7 cut(s) 188, 195, 615, 1164, 1391, 1412, 1755
FalI AAGNNNNNCTT 2 cut(s) 665, 697
FaqI GGGAC 4 cut(s) 1045, 1063, 1152, 1381
FatI CATG 7 cut(s) 184, 191, 611, 1160, 1387, 1408, 1751
FauI CCCGC 2 cut(s) 785, 1086
FblI GTMKAC 3 cut(s) 763, 1082, 1260
FokI GGATG 6 cut(s) 551, 628, 1009, 1109, 1593, 1598
FriOI GRGCYC 4 cut(s) 504, 947, 1152, 1525
FspBI CTAG 3 cut(s) 245, 1154, 1631
GlaI GCGC 1 cut(s) 883
GsuI CTGGAG 1 cut(s) 1509
HaeIII GGCC 6 cut(s) 190, 332, 347, 726, 758, 1638
HapII CCGG 8 cut(s) 344, 438, 759, 1028, 1136, 1142, 1251, 1302
HgaI GACGC 1 cut(s) 1253
HhaI GCGC 1 cut(s) 884
Hin1II CATG 7 cut(s) 188, 195, 615, 1164, 1391, 1412, 1755
Hin6I GCGC 1 cut(s) 882
HinP1I GCGC 1 cut(s) 882
HinfI GANTC 8 cut(s) 229, 457, 638, 1043, 1507, 1627, 1688, 1783
HpaII CCGG 8 cut(s) 344, 438, 759, 1028, 1136, 1142, 1251, 1302
HphI GGTGA 3 cut(s) 397, 1157, 1201
Hpy166II GTNNAC 7 cut(s) 178, 268, 764, 985, 1074, 1083, 1261
Hpy188I TCNGA 4 cut(s) 949, 1200, 1707, 1714
Hpy188III TCNNGA 8 cut(s) 167, 245, 282, 574, 1062, 1336, 1409, 1526
Hpy8I GTNNAC 7 cut(s) 178, 268, 764, 985, 1074, 1083, 1261
Hpy99I CGWCG 2 cut(s) 698, 1226
HpyAV CCTTC 3 cut(s) 151, 322, 731
HpyCH4III ACNGT 6 cut(s) 94, 391, 839, 1054, 1189, 1274
HpyCH4IV ACGT 5 cut(s) 381, 696, 966, 1193, 1232
HpyCH4V TGCA 9 cut(s) 129, 371, 564, 1100, 1393, 1404, 1502, 1593, 1751
HpyF10VI GCNNNNNNNGC 6 cut(s) 353, 561, 1085, 1106, 1454, 1493
HpySE526I ACGT 5 cut(s) 381, 696, 966, 1193, 1232
Hsp92II CATG 7 cut(s) 188, 195, 615, 1164, 1391, 1412, 1755
HspAI GCGC 1 cut(s) 882
Kzo9I GATC 2 cut(s) 97, 1035
LguI GCTCTTC 1 cut(s) 1762
LmnI GCTCC 4 cut(s) 499, 893, 1155, 1528
Lsp1109I GCAGC 9 cut(s) 141, 707, 1121, 1444, 1471, 1483, 1486, 1605, 1735
LweI GCATC 4 cut(s) 170, 573, 1087, 1303
MaeI CTAG 3 cut(s) 245, 1154, 1631
MaeII ACGT 5 cut(s) 381, 696, 966, 1193, 1232
MaeIII GTNAC 3 cut(s) 385, 1189, 1228
MalI GATC 2 cut(s) 99, 1037
MboI GATC 2 cut(s) 97, 1035
MboII GAAGA 6 cut(s) 304, 703, 820, 1363, 1547, 1749
MhlI GDGCHC 5 cut(s) 404, 504, 947, 1152, 1525
MluCI AATT 9 cut(s) 7, 240, 285, 296, 587, 1002, 1238, 1254, 1538
MlyI GAGTC 5 cut(s) 451, 632, 1037, 1697, 1792
MmeI TCCRAC 3 cut(s) 592, 1208, 1215
Mph1103I ATGCAT 1 cut(s) 1102
MseI TTAA 3 cut(s) 683, 1431, 1464
MslI CAYNNNNRTG 3 cut(s) 183, 965, 1661
MspI CCGG 8 cut(s) 344, 438, 759, 1028, 1136, 1142, 1251, 1302
MspR9I CCNGG 6 cut(s) 344, 1028, 1029, 1137, 1143, 1303
Mva1269I GAATGC 1 cut(s) 1404
MvnI CGCG 1 cut(s) 1063
MwoI GCNNNNNNNGC 6 cut(s) 353, 561, 1085, 1106, 1454, 1493
NciI CCSGG 6 cut(s) 344, 1028, 1029, 1137, 1143, 1303
NdeII GATC 2 cut(s) 97, 1035
NlaIII CATG 7 cut(s) 188, 195, 615, 1164, 1391, 1412, 1755
NlaIV GGNNCC 5 cut(s) 501, 1051, 1140, 1524, 1668
NmuCI GTSAC 2 cut(s) 385, 1189
NruI TCGCGA 1 cut(s) 1063
NsiI ATGCAT 1 cut(s) 1102
NspI RCATGY 4 cut(s) 615, 1164, 1391, 1755
PaeI GCATGC 1 cut(s) 1755
PagI TCATGA 1 cut(s) 1408
PciI ACATGT 1 cut(s) 1387
PciSI GCTCTTC 1 cut(s) 1762
PcsI WCGNNNNNNNCGW 2 cut(s) 963, 1067
PctI GAATGC 1 cut(s) 1404
PfeI GAWTC 3 cut(s) 229, 1507, 1627
PfoI TCCNGGA 1 cut(s) 1135
PleI GAGTC 5 cut(s) 451, 632, 1037, 1696, 1791
PpsI GAGTC 5 cut(s) 451, 632, 1037, 1696, 1791
Ppu21I YACGTR 1 cut(s) 382
PscI ACATGT 1 cut(s) 1387
PshAI GACNNNNGTC 1 cut(s) 1069
Psp124BI GAGCTC 2 cut(s) 947, 1152
PspN4I GGNNCC 5 cut(s) 501, 1051, 1140, 1524, 1668
PspPI GGNCC 4 cut(s) 188, 346, 1050, 1139
PsrI GAACNNNNNNTAC 2 cut(s) 792, 824
PstI CTGCAG 1 cut(s) 131
RruI TCGCGA 1 cut(s) 1063
RsaI GTAC 4 cut(s) 177, 583, 754, 818
RsaNI GTAC 4 cut(s) 176, 582, 753, 817
RseI CAYNNNNRTG 3 cut(s) 183, 965, 1661
SacI GAGCTC 2 cut(s) 947, 1152
SapI GCTCTTC 1 cut(s) 1762
SaqAI TTAA 3 cut(s) 683, 1431, 1464
Sau3AI GATC 2 cut(s) 97, 1035
Sau96I GGNCC 4 cut(s) 188, 346, 1050, 1139
SchI GAGTC 5 cut(s) 451, 632, 1037, 1697, 1792
ScrFI CCNGG 6 cut(s) 344, 1028, 1029, 1137, 1143, 1303
SduI GDGCHC 5 cut(s) 404, 504, 947, 1152, 1525
SfaNI GCATC 4 cut(s) 170, 573, 1087, 1303
SfcI CTRYAG 1 cut(s) 127
SinI GGWCC 2 cut(s) 1050, 1139
SmaI CCCGGG 1 cut(s) 1029
SmiMI CAYNNNNRTG 3 cut(s) 183, 965, 1661
SmlI CTYRAG 1 cut(s) 940
SmoI CTYRAG 1 cut(s) 940
SphI GCATGC 1 cut(s) 1755
Sse9I AATT 9 cut(s) 7, 240, 285, 296, 587, 1002, 1238, 1254, 1538
SsiI CCGC 6 cut(s) 723, 778, 823, 852, 1086, 1093
SspMI CTAG 3 cut(s) 245, 1154, 1631
SstI GAGCTC 2 cut(s) 947, 1152
StyD4I CCNGG 6 cut(s) 342, 1026, 1027, 1135, 1141, 1301
StyI CCWWGG 3 cut(s) 69, 364, 624
TaaI ACNGT 6 cut(s) 94, 391, 839, 1054, 1189, 1274
TaiI ACGT 5 cut(s) 384, 699, 969, 1196, 1235
TaqI TCGA 4 cut(s) 326, 510, 1041, 1490
TasI AATT 9 cut(s) 7, 240, 285, 296, 587, 1002, 1238, 1254, 1538
TatI WGTACW 2 cut(s) 581, 816
TauI GCSGC 1 cut(s) 726
TfiI GAWTC 3 cut(s) 229, 1507, 1627
Tru1I TTAA 3 cut(s) 683, 1431, 1464
Tru9I TTAA 3 cut(s) 683, 1431, 1464
TscAI CASTG 3 cut(s) 1020, 1455, 1477
TseFI GTSAC 2 cut(s) 385, 1189
TseI GCWGC 9 cut(s) 129, 720, 1109, 1457, 1484, 1496, 1499, 1593, 1748
Tsp45I GTSAC 2 cut(s) 385, 1189
TspDTI ATGAA 4 cut(s) 733, 1011, 1397, 1548
TspGWI ACGGA 3 cut(s) 92, 1002, 1116
TspMI CCCGGG 1 cut(s) 1027
TspRI CASTG 3 cut(s) 1020, 1455, 1477
VpaK11BI GGWCC 2 cut(s) 1050, 1139
XapI RAATTY 5 cut(s) 7, 240, 285, 587, 1538
XbaI TCTAGA 1 cut(s) 244
XceI RCATGY 4 cut(s) 615, 1164, 1391, 1755
XcmI CCANNNNNNNNNTGG 1 cut(s) 473
XmaI CCCGGG 1 cut(s) 1027
XmiI GTMKAC 3 cut(s) 763, 1082, 1260
XspI CTAG 3 cut(s) 245, 1154, 1631
Zsp2I ATGCAT 1 cut(s) 1102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.