MD14G1136700.v1.1

Belongs to the peptidase A1 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
Physical Location & Seq
Reverse (-)
22051716 .. 22053226
1511 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1136700.v1.1.491

Sequence Viewer

Length: 336 bp
ATGGCAGCAACTCCCGGTATTTCTAGCTCCTCCTCCTCCTCCTCCTCCCTCATGAGCTATTTACTTTACTTCTCTGTAATTCTAACCCTAATTCTCAGCTCTTTGGAGAAGGGCTTTGCCTTGGAAGAGAACCAGCGTCCCCGTACAGTTGAACCCCATCCAGTTTCTCATACAGTTGAACTCAATTCTCTGCTGCCAGCAACCTCATGCAGCCCTAGCTCCTCCGCCAAAGGTACCACAGAGACTGGCAGAAGGACAAGGGTGAGAGAGGGAGTTAATGTCTGGTTTGGTATTGAGGTGATTCTGAAAAAAATTGGTATAAAAAAAAAGTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

112

Amino Acids

11.99

Weight (kDa)

9.73

Isoelectric Point (pI)

59.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 233
AccB1I GGYRCC 1 cut(s) 233
AciI CCGC 1 cut(s) 225
AfaI GTAC 2 cut(s) 145, 235
AgsI TTSAA 2 cut(s) 152, 179
AluBI AGCT 4 cut(s) 27, 57, 99, 219
AluI AGCT 4 cut(s) 27, 57, 99, 219
Alw26I GTCTC 1 cut(s) 236
AlwNI CAGNNNCTG 1 cut(s) 245
ApeKI GCWGC 3 cut(s) 5, 193, 210
Asp718I GGTACC 1 cut(s) 233
AsuC2I CCSGG 1 cut(s) 15
AsuHPI GGTGA 2 cut(s) 274, 310
BanI GGYRCC 1 cut(s) 233
BbvI GCAGC 3 cut(s) 17, 180, 222
BccI CCATC 1 cut(s) 165
BcnI CCSGG 1 cut(s) 15
BcoDI GTCTC 1 cut(s) 236
BfaI CTAG 2 cut(s) 24, 216
BisI GCNGC 3 cut(s) 6, 194, 211
BlsI GCNGC 3 cut(s) 7, 195, 212
Bme1390I CCNGG 1 cut(s) 15
BmiI GGNNCC 1 cut(s) 235
BmrFI CCNGG 1 cut(s) 15
BpuMI CCSGG 1 cut(s) 15
BsaJI CCNNGG 1 cut(s) 120
BsaXI ACNNNNNCTCC 2 cut(s) 264, 294
Bse1I ACTGG 2 cut(s) 161, 250
BseDI CCNNGG 1 cut(s) 120
BseGI GGATG 1 cut(s) 157
BseMII CTCAG 1 cut(s) 109
BseNI ACTGG 2 cut(s) 161, 250
BseRI GAGGAG 7 cut(s) 19, 22, 25, 28, 31, 34, 211
BseXI GCAGC 3 cut(s) 17, 180, 222
BshNI GGYRCC 1 cut(s) 233
BsiSI CCGG 1 cut(s) 15
BslFI GGGAC 1 cut(s) 123
BsmAI GTCTC 1 cut(s) 236
BsmFI GGGAC 1 cut(s) 123
BspACI CCGC 1 cut(s) 225
BspCNI CTCAG 1 cut(s) 108
BspHI TCATGA 1 cut(s) 51
BspLI GGNNCC 1 cut(s) 235
BspT107I GGYRCC 1 cut(s) 233
BsrI ACTGG 2 cut(s) 161, 250
BssECI CCNNGG 1 cut(s) 120
BssT1I CCWWGG 1 cut(s) 120
Bst4CI ACNGT 2 cut(s) 148, 175
Bst6I CTCTTC 1 cut(s) 120
BstC8I GCNNGC 1 cut(s) 198
BstDEI CTNAG 1 cut(s) 95
BstF5I GGATG 1 cut(s) 157
BstMAI GTCTC 1 cut(s) 236
BstMWI GCNNNNNNNGC 1 cut(s) 216
BstSCI CCNGG 1 cut(s) 13
BstV1I GCAGC 3 cut(s) 17, 180, 222
BtsCI GGATG 1 cut(s) 157
Cac8I GCNNGC 1 cut(s) 198
CaiI CAGNNNCTG 1 cut(s) 245
CciI TCATGA 1 cut(s) 51
CseI GACGC 1 cut(s) 125
Csp6I GTAC 2 cut(s) 144, 234
CviAII CATG 2 cut(s) 52, 207
CviJI RGCY 6 cut(s) 27, 57, 99, 114, 213, 219
CviKI_1 RGCY 6 cut(s) 27, 57, 99, 114, 213, 219
CviQI GTAC 2 cut(s) 144, 234
DdeI CTNAG 1 cut(s) 95
Eam1104I CTCTTC 1 cut(s) 120
EarI CTCTTC 1 cut(s) 120
EciI GGCGGA 1 cut(s) 214
Eco130I CCWWGG 1 cut(s) 120
EcoT14I CCWWGG 1 cut(s) 120
ErhI CCWWGG 1 cut(s) 120
FaeI CATG 2 cut(s) 55, 210
FaiI YATR 4 cut(s) 53, 171, 208, 320
FaqI GGGAC 1 cut(s) 123
FatI CATG 2 cut(s) 51, 206
Fnu4HI GCNGC 3 cut(s) 6, 194, 211
FokI GGATG 1 cut(s) 144
Fsp4HI GCNGC 3 cut(s) 6, 194, 211
FspBI CTAG 2 cut(s) 24, 216
GluI GCNGC 3 cut(s) 6, 194, 211
HapII CCGG 1 cut(s) 15
HgaI GACGC 1 cut(s) 125
Hin1II CATG 2 cut(s) 55, 210
HinfI GANTC 1 cut(s) 301
HpaII CCGG 1 cut(s) 15
HphI GGTGA 2 cut(s) 274, 310
Hpy188I TCNGA 1 cut(s) 306
Hpy188III TCNNGA 1 cut(s) 52
HpyAV CCTTC 2 cut(s) 103, 246
HpyCH4III ACNGT 2 cut(s) 148, 175
HpyCH4V TGCA 1 cut(s) 210
HpyF10VI GCNNNNNNNGC 1 cut(s) 216
HpyF3I CTNAG 1 cut(s) 95
Hsp92II CATG 2 cut(s) 55, 210
KpnI GGTACC 1 cut(s) 237
LmnI GCTCC 2 cut(s) 32, 224
LpnPI CCDG 6 cut(s) 28, 146, 174, 210, 231, 268
Lsp1109I GCAGC 3 cut(s) 17, 180, 222
MaeI CTAG 2 cut(s) 24, 216
MboII GAAGA 1 cut(s) 137
MluCI AATT 4 cut(s) 78, 90, 184, 312
MseI TTAA 1 cut(s) 276
MspI CCGG 1 cut(s) 15
MspR9I CCNGG 1 cut(s) 15
MwoI GCNNNNNNNGC 1 cut(s) 216
NciI CCSGG 1 cut(s) 15
NlaIII CATG 2 cut(s) 55, 210
NlaIV GGNNCC 1 cut(s) 235
PagI TCATGA 1 cut(s) 51
PfeI GAWTC 1 cut(s) 301
PkrI GCNGC 3 cut(s) 7, 195, 212
PspN4I GGNNCC 1 cut(s) 235
PstNI CAGNNNCTG 1 cut(s) 245
RsaI GTAC 2 cut(s) 145, 235
RsaNI GTAC 2 cut(s) 144, 234
SaqAI TTAA 1 cut(s) 276
SatI GCNGC 3 cut(s) 6, 194, 211
ScrFI CCNGG 1 cut(s) 15
SetI ASST 7 cut(s) 29, 59, 101, 206, 221, 235, 300
Sse9I AATT 4 cut(s) 78, 90, 184, 312
SsiI CCGC 1 cut(s) 225
SspMI CTAG 2 cut(s) 24, 216
StyD4I CCNGG 1 cut(s) 13
StyI CCWWGG 1 cut(s) 120
TaaI ACNGT 2 cut(s) 148, 175
TasI AATT 4 cut(s) 78, 90, 184, 312
TfiI GAWTC 1 cut(s) 301
Tru1I TTAA 1 cut(s) 276
Tru9I TTAA 1 cut(s) 276
TseI GCWGC 3 cut(s) 5, 193, 210
XspI CTAG 2 cut(s) 24, 216
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.