AT5G27240

DNAJ heat shock N-terminal domain-containing protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
9596766 .. 9601233
4468 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G27240.1

Sequence Viewer

Length: 3315 bp
ATGGACTGGAATAAAGAAGAGGCATGTAGGGCAAAAACATTAGCAGAGGATAAGATGAAGGAAGGTGATTTTGTTGGGGCTCAGAAGCTTTTGTTGAAGGCTCAGAGTCTCTTTTCAGGTCTTGAGAGTTTACCACAAATGTTAGCTGTATGTGATGTCCATAATTCTGCCGAGAAGAAAATCAACTGTCTTGAAAACTGGTACGGTATTCTTCAAGTTATGCATTTTGCTGACGATGCTACAATCAAGAAGCAGGTCAGGAAGCTCGCGTTGCTTCTCCATCCTGACAAAAACCAGTTCCCCGGTGCTGAGGCTGCTTTCAAGCTGGTTTGGGATGCTAGCAGATTTCTCGCTGACAAGGATAAACGGTCTCAGTATGATATAAGGCGCAGAATCTATTTACGGTTGGCTACTAACCAGTTGAATGCAAACTCTGGTCTACAATGTGCTGCTACAAACAGTGCCACTGATACATTTTGGACATGTTGTGAGCATTGTGGCTATAGGTATAAATATTTGAGAAAGTATGTGAACATTCTTCTGAACTGTAACATTTGTCAAAGATCCTACATGGCCTACGACACTGGATTTAATGAAGCACCATCTAAATCAAACACTGGTCAAAAAGAAGTTCAAAATCAGGGTCCCTGTAACACATCCTTGAATACAAATGGGGAGTCTATTGGTGCTCAACCAGGAAGTGTAGCAGCTGAGGTGGATAAGAAAGGAACTTTCAACAAGAAATTCAACAAGAGGAATGGTGGAGGTGAGAGCAAAAAAACTGAAGTAAAAAACTCCAAAATAGAGACTGAATTCGTGAGGAATGATGATGAGGAAAAGATGAAGAGTGCAGCTAAACTACACAAGCCACATCCTGAGGTTACAGAACCTGAAATAGGCGCATCAAAATCTGTACCTGATGAGTCAGTTTCAAGGAGTGATGAAGCACCCTCTACGAGCAAGGACAAGAACAAGATGAAAAAAGGTGTTGAGGAGAGTATTAATGTTGATGGTTCTGATTTTATTAAGGATAAAGCGTATTCAAAAGATAATAATAAGAGGAAATCTCCAAGGAGAAGCCAACAAAGTTCTTACGCTGAGGAGGAGAAAATCAGTGATAATTCCCTAGGCCCTCCAAAAAAAAGGTTAAGATCAAATGTCGGATTGAAATCTGAACAAACTACAAGAAAAGGATTAGTAGGTGTTGGATCATCTAAACGTTTTGATTCTGGTGGTGGTTCATCTGCCCCTTCATGTGCGTTTAAAAGAAAAGCTAAGAAATTTGTGGATTCTGGATATCAAGAAATCTCATCTGTCAAAGACAAAGAGAGGGAAGTACGTAAAGCAAGTGGAGAAGGGGTGGTTATGGAAGCAAAGATTGACAATAACCACAATCCTAATGAAAATCTTATTACAGAGGATTTGCCTGATCCAGAGTTCAGTAATTTTGAACTGACAACAAGCTGTTTTGGTGTCAACCAGGTGTGGTCCATGTACGATCCGATTGATGGTATGCCTCGGTTGTATGCTCGGATAGACAAAGTGTTGGTTCCTGAGTTCAAGTTGTGGATTACGTGGATTGACCCGCTTCAGGATAATAAAGATAACTCTATCCCCATTGCTTGTGGAATCTTTCAAGGTGGGGGTTCAGAGGAAGAGAACGATCACTTAAAATTTTCTTGTCAGATGTTTCACTTAACTCGCAACAATAGCGTTGTCATATATCCAAGAAAGGGAGAAATTTGGGCAATTTTCAGAGGCTGGGATATCAGTTGGAGTGCTAGCTCAGAAAATCATAAACATCCTTATGAATATGATTTTGTGGAAGTTTTGTCTAATTTTAACGATGAGAATGGCCTTGGAGTGGGCTTTCTGGGAAAAGTTGAAGGGTTTGTTTCCCTCTTTCGCCAAGATGCACAGGATGGAGTTCTCCAACTTCAGATTCCACCAAGCCAGATGCTCAGGTTTTCACATAAAGTCCCATCATTCAAAATGACTGGAAAAGAGAGAGAAGGTGTTCCTCCTGGGTGCTTTGAATTAGATCCCGCTGCTTTACCAAAAGAATTGTTCGAGGTTTATGATTCTAAAGTTGATGTTGGGTTGGATAGAGAATTGCCGAATGGTAAAACTGGTGGTCCTTTTCCTGAAGCTTCCAAGGTTGAAATGCAGGCAAACACTACCAGAGAGAGCAGTCCATTTAAAAAGAAACGTCCAAAAGTCCATGATAATCATGGTTCATTCTCCAAAGAATCTGATGGTAGACGCACTAATCATGAAAGGAACTCAGCGAAGGAGTCCAGAAAGAGTGTCAAAGCAGTAGATGCCTTGAATCTGCGAAAATCTCCTCGTCTTTTGAGTGAAACAAACAGTCAAGCAAATTCAAGGTCAGGCCGACAAATAGCTGAGAAGAAGAGTGCTAACAATGGTGAATCCTGTGGAAAGCCAGGTGGATTGTCTTTATCTGGTGAGAAGATGTCTGAGAAGACTATCACAAGAATGAGAAAAACACCTCAGGATATACACAAACCGACAGTGAACGTAAAGAAACATGGAAGAAATGATGAGTCATTGTCTCAGTCCAGGGGTGATGGTTTGCTGACTCAGTTAAATGGTAATATGAAAAGCTCAGAACCAGAGACTCGCGTGCCATCTAGTTGCAAAACCGTGAAAGAAAACACTTTTAACTTCGAGAACCAGAGATCATGGGACAAATTCCAGATTGATCAAATATGGGCTATTTACAGCAATGACAAAGGGAGTCCCAGAAAGTATGCTCAGATCAAGAAAATCGACACAAGTCCTGAATTCAAGTTACATGTAGCACCTCTAGAGCTGTATCGCCCTCCAATACACATGCCACGCCCAGTGTGCTGTGGCCGCTTCAAGTTGAAAACCGGTAAAGCCGAAGTATATGTACCTAGCAGCTTCTCACATCAGGTTAAAGCTGTCAAGACTAAGAAGAACAGATTCGAAGTATACCCAGGGAAGGGTGAGATCTGGGCTCTGTACAAGAACTGCAACACAAGAGATTATACTGAGACGGAAGAACTTGAGATTGTAGAAGTAGTGGAAACCGACGAGCAGAGGATACAAGCAATGACTTTGACTGCTAAAGGGTTTAACAACAAGCCTCTATACAGAAGGAGTGAAGAGTCAAACGCAAGTTTTATTGACATTCCAAAGACTGAAGTGTGTCGATTCTCGCATCAGATTCCTGCGTTTAGACACGAGAGTAGAGCGACACGGTTTGGAGATGGCCAATACTGGGAGCTTGACCTTAAAGCAGTTTTGGGTCTCAACTTAAAGAACCCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1104

Amino Acids

124.44

Weight (kDa)

9.02

Isoelectric Point (pI)

45.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 66 - 127 7.1e-18 DnaJ domain
Zn_ribbon_20 PF23551 159 - 192 9.8e-06 Zinc beta-ribbon domain
DUF3444 PF11926 474 - 669 1.1e-65 Domain of unknown function (DUF3444)
DUF3444 PF11926 887 - 1077 6.1e-50 Domain of unknown function (DUF3444)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 244
AccI GTMKAC 3 cut(s) 439, 2260, 2976
AccII CGCG 2 cut(s) 269, 2643
AciI CCGC 3 cut(s) 1586, 2046, 2878
AclI AACGTT 1 cut(s) 1219
AclWI GGATC 5 cut(s) 558, 1216, 1424, 1493, 2036
AcoI YGGCCR 2 cut(s) 2875, 3256
AcsI RAATTY 8 cut(s) 743, 812, 1280, 1673, 1740, 2377, 2711, 2804
AcuI CTGAAG 5 cut(s) 804, 1574, 1922, 2166, 3207
AfaI GTAC 6 cut(s) 203, 915, 1338, 1496, 2916, 3008
AfiI CCNNNNNNNGG 8 cut(s) 896, 1508, 1591, 1733, 1864, 2986, 2987, 3265
AflIII ACRYGT 2 cut(s) 482, 2815
AgeI ACCGGT 1 cut(s) 2894
AjnI CCWGG 6 cut(s) 694, 1479, 2023, 2443, 2579, 2980
AjuI GAANNNNNNNTTGG 2 cut(s) 1926, 1958
Alw21I GWGCWC 1 cut(s) 691
Alw26I GTCTC 7 cut(s) 113, 375, 800, 2577, 2630, 3032, 3299
AlwI GGATC 5 cut(s) 558, 1216, 1424, 1493, 2036
AlwNI CAGNNNCTG 2 cut(s) 890, 1761
AoxI GGCC 6 cut(s) 573, 1129, 1855, 2389, 2875, 3256
ApeKI GCWGC 6 cut(s) 314, 449, 707, 851, 2048, 2922
ApoI RAATTY 8 cut(s) 743, 812, 1280, 1673, 1740, 2377, 2711, 2804
ArsI GACNNNNNNTTYG 6 cut(s) 628, 660, 662, 694, 2369, 2401
AseI ATTAAT 1 cut(s) 1002
AsiGI ACCGGT 1 cut(s) 2894
Asp700I GAANNNNTTC 2 cut(s) 2016, 2966
AspA2I CCTAGG 1 cut(s) 1126
AspLEI GCGC 2 cut(s) 390, 902
AspS9I GGNCC 4 cut(s) 644, 1130, 1488, 2135
AsuC2I CCSGG 1 cut(s) 303
AsuHPI GGTGA 6 cut(s) 77, 779, 2438, 2477, 2597, 3002
AsuII TTCGAA 1 cut(s) 2970
AsuNHI GCTAGC 2 cut(s) 338, 1781
AvaII GGWCC 3 cut(s) 644, 1488, 2135
AvrII CCTAGG 1 cut(s) 1126
AxyI CCTNAGG 2 cut(s) 876, 2511
BalI TGGCCA 1 cut(s) 3258
BanII GRGCYC 2 cut(s) 82, 3004
BarI GAAGNNNNNNTAC 2 cut(s) 2898, 2930
BauI CACGAG 1 cut(s) 3227
BbsI GAAGAC 1 cut(s) 2489
Bbv12I GWGCWC 1 cut(s) 691
BbvCI CCTCAGC 3 cut(s) 309, 711, 1098
BbvI GCAGC 6 cut(s) 301, 436, 719, 863, 2035, 2934
BcgI CGANNNNNNTGC 2 cut(s) 331, 365
BciT130I CCWGG 6 cut(s) 696, 1481, 2025, 2445, 2581, 2982
BciVI GTATCC 1 cut(s) 3081
BclI TGATCA 1 cut(s) 2722
BcnI CCSGG 1 cut(s) 303
BcoDI GTCTC 7 cut(s) 113, 375, 800, 2577, 2630, 3032, 3299
BfaI CTAG 6 cut(s) 339, 1127, 1782, 2652, 2828, 2919
BfmI CTRYAG 1 cut(s) 502
BfuAI ACCTGC 1 cut(s) 244
BfuI GTATCC 1 cut(s) 3081
BglII AGATCT 1 cut(s) 2994
BisI GCNGC 7 cut(s) 315, 450, 708, 852, 2049, 2878, 2923
BlnI CCTAGG 1 cut(s) 1126
BlsI GCNGC 7 cut(s) 316, 451, 709, 853, 2050, 2879, 2924
Bme1390I CCNGG 7 cut(s) 303, 696, 1481, 2025, 2445, 2581, 2982
Bme18I GGWCC 3 cut(s) 644, 1488, 2135
BmgT120I GGNCC 4 cut(s) 644, 1130, 1488, 2135
BmiI GGNNCC 3 cut(s) 645, 646, 1551
BmrFI CCNGG 7 cut(s) 303, 696, 1481, 2025, 2445, 2581, 2982
BmrI ACTGGG 2 cut(s) 2858, 3274
BmsI GCATC 7 cut(s) 226, 325, 911, 1903, 1947, 2311, 3214
BmtI GCTAGC 2 cut(s) 342, 1785
BmuI ACTGGG 2 cut(s) 2858, 3274
BoxI GACNNNNGTC 1 cut(s) 2796
BpiI GAAGAC 1 cut(s) 2489
BplI GAGNNNNNCTC 2 cut(s) 1051, 1083
Bpu10I CCTNAGC 4 cut(s) 309, 711, 1098, 1961
Bpu14I TTCGAA 1 cut(s) 2970
BpuEI CTTGAG 2 cut(s) 143, 3071
BpuMI CCSGG 1 cut(s) 303
BsaAI YACGTR 2 cut(s) 1340, 1575
BsaBI GATNNNNATC 1 cut(s) 1168
BsaI GGTCTC 2 cut(s) 375, 3299
BsaWI WCCGGW 1 cut(s) 2894
BsaXI ACNNNNNCTCC 2 cut(s) 1344, 1374
Bsc4I CCNNNNNNNGG 8 cut(s) 896, 1508, 1591, 1733, 1864, 2986, 2987, 3265
Bse118I RCCGGY 1 cut(s) 2894
Bse21I CCTNAGG 2 cut(s) 876, 2511
Bse3DI GCAATG 3 cut(s) 1617, 2752, 3102
Bse8I GATNNNNATC 1 cut(s) 1168
BseBI CCWGG 6 cut(s) 696, 1481, 2025, 2445, 2581, 2982
BseGI GGATG 6 cut(s) 280, 340, 656, 871, 1801, 1927
BseJI GATNNNNATC 1 cut(s) 1168
BseLI CCNNNNNNNGG 8 cut(s) 896, 1508, 1591, 1733, 1864, 2986, 2987, 3265
BseMI GCAATG 3 cut(s) 1617, 2752, 3102
BseRI GAGGAG 4 cut(s) 1007, 1115, 1118, 2334
BseXI GCAGC 6 cut(s) 301, 436, 719, 863, 2035, 2934
BseYI CCCAGC 1 cut(s) 1761
BsgI GTGCAG 1 cut(s) 870
Bsh1236I CGCG 2 cut(s) 269, 2643
BshFI GGCC 6 cut(s) 575, 1131, 1857, 2391, 2877, 3258
BshTI ACCGGT 1 cut(s) 2894
BsiHKAI GWGCWC 1 cut(s) 691
BsiSI CCGG 2 cut(s) 303, 2895
BslFI GGGAC 4 cut(s) 630, 1964, 2720, 2745
BslI CCNNNNNNNGG 8 cut(s) 896, 1508, 1591, 1733, 1864, 2986, 2987, 3265
BsmAI GTCTC 7 cut(s) 113, 375, 800, 2577, 2630, 3032, 3299
BsmBI CGTCTC 1 cut(s) 3032
BsmFI GGGAC 4 cut(s) 630, 1964, 2720, 2745
BsmI GAATGC 1 cut(s) 430
BsnI GGCC 6 cut(s) 575, 1131, 1857, 2391, 2877, 3258
Bso31I GGTCTC 2 cut(s) 375, 3299
Bsp119I TTCGAA 1 cut(s) 2970
Bsp1286I GDGCHC 3 cut(s) 82, 691, 3004
Bsp1407I TGTACA 1 cut(s) 3006
BspACI CCGC 3 cut(s) 1586, 2046, 2878
BspANI GGCC 6 cut(s) 575, 1131, 1857, 2391, 2877, 3258
BspFNI CGCG 2 cut(s) 269, 2643
BspHI TCATGA 1 cut(s) 2272
BspLI GGNNCC 3 cut(s) 645, 646, 1551
BspMI ACCTGC 1 cut(s) 244
BspOI GCTAGC 2 cut(s) 342, 1785
BspPI GGATC 5 cut(s) 558, 1216, 1424, 1493, 2036
BspT104I TTCGAA 1 cut(s) 2970
BspTNI GGTCTC 2 cut(s) 375, 3299
BsrDI GCAATG 3 cut(s) 1617, 2752, 3102
BsrFI RCCGGY 1 cut(s) 2894
BsrGI TGTACA 1 cut(s) 3006
BssAI RCCGGY 1 cut(s) 2894
BssNAI GTATAC 1 cut(s) 2977
BssSI CACGAG 1 cut(s) 3227
BssT1I CCWWGG 4 cut(s) 1070, 1126, 1858, 2154
Bst1107I GTATAC 1 cut(s) 2977
Bst2BI CACGAG 1 cut(s) 3227
Bst2UI CCWGG 6 cut(s) 696, 1481, 2025, 2445, 2581, 2982
Bst6I CTCTTC 5 cut(s) 12, 839, 1650, 2405, 3144
BstAPI GCANNNNNTGC 1 cut(s) 2321
BstAUI TGTACA 1 cut(s) 3006
BstBAI YACGTR 2 cut(s) 1340, 1575
BstBI TTCGAA 1 cut(s) 2970
BstC8I GCNNGC 5 cut(s) 267, 340, 1783, 2169, 2645
BstENI CCTNNNNNAGG 1 cut(s) 894
BstF5I GGATG 6 cut(s) 280, 340, 656, 871, 1801, 1927
BstFNI CGCG 2 cut(s) 269, 2643
BstHHI GCGC 2 cut(s) 390, 902
BstMAI GTCTC 7 cut(s) 113, 375, 800, 2577, 2630, 3032, 3299
BstMWI GCNNNNNNNGC 8 cut(s) 29, 236, 271, 314, 1710, 2321, 2868, 2877
BstNI CCWGG 6 cut(s) 696, 1481, 2025, 2445, 2581, 2982
BstNSI RCATGY 4 cut(s) 27, 486, 2819, 2857
BstPAI GACNNNNGTC 1 cut(s) 2796
BstSCI CCNGG 7 cut(s) 301, 694, 1479, 2023, 2443, 2579, 2980
BstSFI CTRYAG 1 cut(s) 502
BstSNI TACGTA 1 cut(s) 1340
BstUI CGCG 2 cut(s) 269, 2643
BstV1I GCAGC 6 cut(s) 301, 436, 719, 863, 2035, 2934
BstV2I GAAGAC 1 cut(s) 2489
BstX2I RGATCY 3 cut(s) 563, 2041, 2994
BstYI RGATCY 3 cut(s) 563, 2041, 2994
BstZ17I GTATAC 1 cut(s) 2977
Bsu36I CCTNAGG 2 cut(s) 876, 2511
BsuI GTATCC 1 cut(s) 3081
BsuRI GGCC 6 cut(s) 575, 1131, 1857, 2391, 2877, 3258
BtsCI GGATG 6 cut(s) 280, 340, 656, 871, 1801, 1927
BtsIMutI CAGTG 7 cut(s) 465, 466, 582, 615, 1120, 2538, 2871
BveI ACCTGC 1 cut(s) 244
Cac8I GCNNGC 5 cut(s) 267, 340, 1783, 2169, 2645
CaiI CAGNNNCTG 2 cut(s) 890, 1761
CciI TCATGA 1 cut(s) 2272
CfoI GCGC 2 cut(s) 390, 902
Cfr10I RCCGGY 1 cut(s) 2894
Cfr13I GGNCC 4 cut(s) 644, 1130, 1488, 2135
CseI GACGC 1 cut(s) 2271
CsiI ACCWGGT 1 cut(s) 1479
Csp6I GTAC 6 cut(s) 202, 914, 1337, 1495, 2915, 3007
CspAI ACCGGT 1 cut(s) 2894
CviQI GTAC 6 cut(s) 202, 914, 1337, 1495, 2915, 3007
DraI TTTAAA 2 cut(s) 1264, 2200
EaeI YGGCCR 2 cut(s) 2875, 3256
Eam1104I CTCTTC 5 cut(s) 12, 839, 1650, 2405, 3144
EarI CTCTTC 5 cut(s) 12, 839, 1650, 2405, 3144
Eco105I TACGTA 1 cut(s) 1340
Eco130I CCWWGG 4 cut(s) 1070, 1126, 1858, 2154
Eco24I GRGCYC 2 cut(s) 82, 3004
Eco31I GGTCTC 2 cut(s) 375, 3299
Eco32I GATATC 2 cut(s) 1298, 1768
Eco47I GGWCC 3 cut(s) 644, 1488, 2135
Eco57I CTGAAG 5 cut(s) 804, 1574, 1922, 2166, 3207
Eco81I CCTNAGG 2 cut(s) 876, 2511
EcoNI CCTNNNNNAGG 1 cut(s) 894
EcoO109I RGGNCCY 2 cut(s) 644, 1130
EcoRI GAATTC 2 cut(s) 812, 2804
EcoRII CCWGG 6 cut(s) 694, 1479, 2023, 2443, 2579, 2980
EcoRV GATATC 2 cut(s) 1298, 1768
EcoT14I CCWWGG 4 cut(s) 1070, 1126, 1858, 2154
EcoT22I ATGCAT 1 cut(s) 225
EcoT38I GRGCYC 2 cut(s) 82, 3004
ErhI CCWWGG 4 cut(s) 1070, 1126, 1858, 2154
Esp3I CGTCTC 1 cut(s) 3032
FaqI GGGAC 4 cut(s) 630, 1964, 2720, 2745
FauI CCCGC 2 cut(s) 1593, 2053
FbaI TGATCA 1 cut(s) 2722
FblI GTMKAC 3 cut(s) 439, 2260, 2976
Fnu4HI GCNGC 7 cut(s) 315, 450, 708, 852, 2049, 2878, 2923
FokI GGATG 6 cut(s) 267, 347, 643, 858, 1788, 1934
FriOI GRGCYC 2 cut(s) 82, 3004
Fsp4HI GCNGC 7 cut(s) 315, 450, 708, 852, 2049, 2878, 2923
FspBI CTAG 6 cut(s) 339, 1127, 1782, 2652, 2828, 2919
GlaI GCGC 2 cut(s) 389, 901
GluI GCNGC 7 cut(s) 315, 450, 708, 852, 2049, 2878, 2923
GsaI CCCAGC 1 cut(s) 1765
HaeIII GGCC 6 cut(s) 575, 1131, 1857, 2391, 2877, 3258
HapII CCGG 2 cut(s) 303, 2895
HgaI GACGC 1 cut(s) 2271
HhaI GCGC 2 cut(s) 390, 902
Hin6I GCGC 2 cut(s) 388, 900
HinP1I GCGC 2 cut(s) 388, 900
HincII GTYRAC 1 cut(s) 1477
HindII GTYRAC 1 cut(s) 1477
HindIII AAGCTT 2 cut(s) 86, 2148
HpaII CCGG 2 cut(s) 303, 2895
HphI GGTGA 6 cut(s) 77, 779, 2438, 2477, 2597, 3002
Hpy166II GTNNAC 7 cut(s) 131, 440, 532, 1477, 2261, 2536, 2977
Hpy8I GTNNAC 7 cut(s) 131, 440, 532, 1477, 2261, 2536, 2977
Hpy99I CGWCG 1 cut(s) 3080
HpyCH4IV ACGT 5 cut(s) 1219, 1339, 1574, 2209, 2538
HpyCH4V TGCA 7 cut(s) 223, 428, 851, 1916, 2167, 2658, 3018
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 236, 271, 314, 1710, 2321, 2868, 2877
HpySE526I ACGT 5 cut(s) 1219, 1339, 1574, 2209, 2538
HspAI GCGC 2 cut(s) 388, 900
KflI GGGWCCC 1 cut(s) 644
Ksp22I TGATCA 1 cut(s) 2722
LmnI GCTCC 1 cut(s) 3268
Lsp1109I GCAGC 6 cut(s) 301, 436, 719, 863, 2035, 2934
LweI GCATC 7 cut(s) 226, 325, 911, 1903, 1947, 2311, 3214
MabI ACCWGGT 1 cut(s) 1479
MaeI CTAG 6 cut(s) 339, 1127, 1782, 2652, 2828, 2919
MaeII ACGT 5 cut(s) 1219, 1339, 1574, 2209, 2538
MaeIII GTNAC 4 cut(s) 548, 650, 880, 2811
MflI RGATCY 3 cut(s) 563, 2041, 2994
MhlI GDGCHC 3 cut(s) 82, 691, 3004
MlsI TGGCCA 1 cut(s) 3258
MluNI TGGCCA 1 cut(s) 3258
MlyI GAGTC 9 cut(s) 115, 686, 932, 2303, 2573, 2593, 2632, 2767, 3161
MmeI TCCRAC 5 cut(s) 1141, 1186, 1754, 1957, 2082
Mox20I TGGCCA 1 cut(s) 3258
Mph1103I ATGCAT 1 cut(s) 225
MroXI GAANNNNTTC 2 cut(s) 2016, 2966
MscI TGGCCA 1 cut(s) 3258
MslI CAYNNNNRTG 2 cut(s) 1806, 2495
Msp20I TGGCCA 1 cut(s) 3258
MspA1I CMGCKG 2 cut(s) 710, 2048
MspI CCGG 2 cut(s) 303, 2895
MspR9I CCNGG 7 cut(s) 303, 696, 1481, 2025, 2445, 2581, 2982
Mva1269I GAATGC 1 cut(s) 430
MvaI CCWGG 6 cut(s) 696, 1481, 2025, 2445, 2581, 2982
MvnI CGCG 2 cut(s) 269, 2643
MwoI GCNNNNNNNGC 8 cut(s) 29, 236, 271, 314, 1710, 2321, 2868, 2877
NciI CCSGG 1 cut(s) 303
NheI GCTAGC 2 cut(s) 338, 1781
NlaIV GGNNCC 3 cut(s) 645, 646, 1551
NmeAIII GCCGAG 1 cut(s) 196
NsiI ATGCAT 1 cut(s) 225
NspI RCATGY 4 cut(s) 27, 486, 2819, 2857
NspV TTCGAA 1 cut(s) 2970
PagI TCATGA 1 cut(s) 2272
PasI CCCWGGG 1 cut(s) 2981
PciI ACATGT 2 cut(s) 482, 2815
PctI GAATGC 1 cut(s) 430
PdmI GAANNNNTTC 2 cut(s) 2016, 2966
PinAI ACCGGT 1 cut(s) 2894
PkrI GCNGC 7 cut(s) 316, 451, 709, 853, 2050, 2879, 2924
PleI GAGTC 9 cut(s) 114, 685, 931, 2302, 2572, 2593, 2632, 2766, 3160
PpsI GAGTC 9 cut(s) 114, 685, 931, 2302, 2572, 2593, 2632, 2766, 3160
Ppu21I YACGTR 2 cut(s) 1340, 1575
PpuMI RGGWCCY 1 cut(s) 644
PscI ACATGT 2 cut(s) 482, 2815
PshAI GACNNNNGTC 1 cut(s) 2796
PshBI ATTAAT 1 cut(s) 1002
Psp1406I AACGTT 1 cut(s) 1219
Psp5II RGGWCCY 1 cut(s) 644
Psp6I CCWGG 6 cut(s) 694, 1479, 2023, 2443, 2579, 2980
PspFI CCCAGC 1 cut(s) 1761
PspGI CCWGG 6 cut(s) 694, 1479, 2023, 2443, 2579, 2980
PspN4I GGNNCC 3 cut(s) 645, 646, 1551
PspPI GGNCC 4 cut(s) 644, 1130, 1488, 2135
PspPPI RGGWCCY 1 cut(s) 644
PstNI CAGNNNCTG 2 cut(s) 890, 1761
PsuI RGATCY 3 cut(s) 563, 2041, 2994
PvuII CAGCTG 1 cut(s) 710
RsaI GTAC 6 cut(s) 203, 915, 1338, 1496, 2916, 3008
RsaNI GTAC 6 cut(s) 202, 914, 1337, 1495, 2915, 3007
RseI CAYNNNNRTG 2 cut(s) 1806, 2495
SatI GCNGC 7 cut(s) 315, 450, 708, 852, 2049, 2878, 2923
Sau96I GGNCC 4 cut(s) 644, 1130, 1488, 2135
SchI GAGTC 9 cut(s) 115, 686, 932, 2303, 2573, 2593, 2632, 2767, 3161
ScrFI CCNGG 7 cut(s) 303, 696, 1481, 2025, 2445, 2581, 2982
SduI GDGCHC 3 cut(s) 82, 691, 3004
SexAI ACCWGGT 1 cut(s) 1479
SfaNI GCATC 7 cut(s) 226, 325, 911, 1903, 1947, 2311, 3214
SfcI CTRYAG 1 cut(s) 502
SfuI TTCGAA 1 cut(s) 2970
SinI GGWCC 3 cut(s) 644, 1488, 2135
SmiMI CAYNNNNRTG 2 cut(s) 1806, 2495
SmlI CTYRAG 2 cut(s) 122, 3050
SmoI CTYRAG 2 cut(s) 122, 3050
SnaBI TACGTA 1 cut(s) 1340
SsiI CCGC 3 cut(s) 1586, 2046, 2878
SspI AATATT 1 cut(s) 515
SspMI CTAG 6 cut(s) 339, 1127, 1782, 2652, 2828, 2919
StyD4I CCNGG 7 cut(s) 301, 694, 1479, 2023, 2443, 2579, 2980
StyI CCWWGG 4 cut(s) 1070, 1126, 1858, 2154
TaiI ACGT 5 cut(s) 1222, 1342, 1577, 2212, 2541
TaqI TCGA 5 cut(s) 2070, 2688, 2790, 2970, 3196
TatI WGTACW 1 cut(s) 3006
TauI GCSGC 1 cut(s) 2880
TscAI CASTG 7 cut(s) 466, 472, 589, 622, 1120, 2538, 2871
TseI GCWGC 6 cut(s) 314, 449, 707, 851, 2048, 2922
TspGWI ACGGA 1 cut(s) 3056
TspRI CASTG 7 cut(s) 466, 472, 589, 622, 1120, 2538, 2871
VpaK11BI GGWCC 3 cut(s) 644, 1488, 2135
VspI ATTAAT 1 cut(s) 1002
XagI CCTNNNNNAGG 1 cut(s) 894
XapI RAATTY 8 cut(s) 743, 812, 1280, 1673, 1740, 2377, 2711, 2804
XbaI TCTAGA 1 cut(s) 2827
XceI RCATGY 4 cut(s) 27, 486, 2819, 2857
XcmI CCANNNNNNNNNTGG 1 cut(s) 2228
XmaJI CCTAGG 1 cut(s) 1126
XmiI GTMKAC 3 cut(s) 439, 2260, 2976
XmnI GAANNNNTTC 2 cut(s) 2016, 2966
XspI CTAG 6 cut(s) 339, 1127, 1782, 2652, 2828, 2919
Zsp2I ATGCAT 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.