Rw3G003800

Domain of unknown function (DUF3444)

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
Physical Location & Seq
Forward (+)
3276751 .. 3282707
5957 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G003800.1

Sequence Viewer

Length: 2550 bp
ATGGAGTGCAACAAAGATGAGGCAGAAAGGGCAATGCAACTTTCGGAGGAAAAGATCCAAAATAAGGACTTTAAAGGAGCAAAGGAGATGGCACTAAAGGCTCAACGACTCTACCCTCAGCTTGACAACATTTCTCGCTTAATTACAGTATGTGAAGTTCACTGTTCAGCAGAAAAGAAGGTAGGGGGATCAGAAATGGACTGGTATGGCATTCTTCAGATTCAGCAATTTGATGATGAAGCAACGATCAAGAAACAATACAGAAAACTTGGGCTGCTACTTCATCCCGATAAGAATAGGTTTACTGGGGCGGAGGCTGCTTTTAAGCTGATTGGGGAAGCAAACAGGGTGCTGACTGACCAAGGAAGTCGTTCTAAATATGACATCAAGTTGAGCGCTTTAACTGGTACCAAATCATTAGGTCATCAGTCATATTTTAACTTCTTTGGACCCAAACATTCCAGTGCTGCAAGTAGCGTTCCGAATATTCCTCAGTCACGTTACACTAGTGTGAATTTACATCAGCCAGTGAATGTACAACAACCGGTGCAACCAGACACAATCAAGATAGCTTGCCCCTCGTGTAAACGAATGTACGATTACAACTTTGCAAATCGACTCATATTTTGTCAAAGATGCCTAGGAATCTTTGATGCCTCTGATTTGGGTCCAGAATCTCTTGGGAATCCAGTAGCTCCAAGTCAAGGTTCTTCAAAAGAAGCTTCACAAAGTAATGGAGGGACTGGATACCCATCTTCAACAACTAATGGAAATGCAACGTCAAAGGCGGCAAGTGCTACTGAAGGTGGTGGAGCCTCTAAGACTGTAAAGAGAGATATTGAGAATGGAGTTGGAATTGAGAAGCAAGGGGTTGAAAGGTCTGAGTCTGGTCCACTGAAGTCAAAGAATTCAAGAAAATCAAGAAACAGAAAAAGAGGAGAGAATGCAACTTTTGATTCTGGTGAAAGTTCCAAGACTGGAAAAGAAAAGGTTGGTATTCCTTCTGAAGTCAGTGAGCGTCACACCAGGAGATCTTCAAGGAGTATACATAATCATTCCTTTTATGAAACTGTAAATGATGATGATGATGATGATGATGATGAAAATGATGATGATATTGGCAATGTCAAGGTGAATGATGATGTCAATGTGAGTAGGGAAAGCCCATTTCCCACTGCTACTAGAAAGAAGAGGGTTAATGCATCTGTGGATGGTGGAGTGTATAGGCAAACTGTCTTGGCCCTTAGTGCTATGGATGAGTATAGGAAATTAGGAAAACAAAGAGTGAGGCGCAAAAGAAGCAACACTGATGAAATTGAGTTACAGGTAAATGAATTATCCATGGCAGATAGCAATGGCAGCAAGTCTGTGGCAGATAACAGTGGCAGCAAGTCCGTGGCAGATAACAGTGGCAGCAAGTCCGTGGCGGATAACAATGGCAGCAAGTCCGTGGCAGATAACAATGGCAGCAAGTCCGTGGCAGATAACAATGGCAGCAAGTCCGTGGCAGATAACAGTGGCAGCAAGTCCATGACATCCAGGCGAAAGATCATCGAGGTTCCTGAACCTGAGTTCCATAGGTTTGTGCTCAGTAAAGATGTGTTACAGAAAACTTTTAAAGCCAATCAAACATGGGTTCTTTATGATCCAGCAGATGGCATGCCAAGACGCTATGCATGTATCAAGAAAGTCTTACACCCTGGATTTAGGGTGAAAATCACCTGGCTGGAGCCCGATCCCGATGACCAAGGTGAGGTTGATTGGTGTAGCAAAAAGTTGCCAGTTGCATGTGGTAAGTTTGGATTTGCGCTCACTGAAGAAGTTGCAGATCATACTGTGTTTTCTCATGAGTATATACACTCCACAAAAGGCAAGGATAAAAGCTCTTTTCGGATATATCCTAGGAAGGGAGAAACCTGGGCCCTCTACCAGGATTGGGATTTGGGGTGGAGTTCTGAGCCTGAAAAGCATTCACAATACAAGTTTTATTTTGTAGAAGTCCTGTCAGATTTTTCTGAAAAGTTTGGCGCTGGAGTTGCTTATTTAGGCAAAGTAAAAGGATTTGTTAGTTTGTTTGAGCCAGCTGAGCAGCAGGGGGTTCTCAAGTTTCAAGTTCCACCTAATGAGTTGTATAGATTTTCTCATCAAATTCCCTGTTACAAGATGTGTGGTAGTGAAGGATATGGTGTTCCTGCTGGTTCTTTTGAGTTTGATCCTGCTTCTTTGCCTGCCAGTCTTTTCGATCGAAGAAGCACTGTCACCATAGCCAAACCTTCTGGCTTCTTACCTTCTGATGGGAAACACCCACTCCTCTCCCTCAGTTTCACTCTCTTCCTCTCTTCCCGCTCTCATTTCCCTCCCTCCCTCTCTCTCTCTCTCTCTCAAAACCCTCACCACATCATCATCAGGTTTGAGAGCTCGCGTTTAGGCTTCGGTGTTGGGTGGTGCTTTTGCATCGATGGGGATGTCCTGAATCTCTTGGTTGATTGCTTTTGCTCATACCTTTACCACATTCCCTTACTGAATGTTTTGAGGATTATGGATGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

849

Amino Acids

94.07

Weight (kDa)

8.14

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 67 - 128 1.4e-17 DnaJ domain
DUF3444 PF11926 516 - 726 3.5e-71 Domain of unknown function (DUF3444)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 407
AccB1I GGYRCC 1 cut(s) 407
AccB7I CCANNNNNTGG 1 cut(s) 1655
AccBSI CCGCTC 1 cut(s) 2346
AccI GTMKAC 1 cut(s) 1045
AccII CGCG 1 cut(s) 2422
AciI CCGC 4 cut(s) 311, 788, 1427, 2344
AclWI GGATC 5 cut(s) 49, 196, 1640, 1730, 2207
AcsI RAATTY 3 cut(s) 514, 907, 2148
AcuI CTGAAG 5 cut(s) 200, 822, 917, 1026, 1836
AfaI GTAC 3 cut(s) 409, 537, 596
AfeI AGCGCT 1 cut(s) 397
AfiI CCNNNNNNNGG 8 cut(s) 64, 704, 1655, 1753, 1907, 1930, 1936, 2294
AgeI ACCGGT 1 cut(s) 544
AgsI TTSAA 6 cut(s) 714, 759, 875, 912, 1038, 2111
AhlI ACTAGT 1 cut(s) 506
AjnI CCWGG 6 cut(s) 1025, 1538, 1699, 1721, 1916, 1929
AjuI GAANNNNNNNTTGG 2 cut(s) 691, 723
AleI CACNNNNGTG 1 cut(s) 509
AloI GAACNNNNNNTCC 4 cut(s) 1557, 1589, 2172, 2204
AluBI AGCT 8 cut(s) 121, 328, 572, 695, 722, 1884, 2084, 2418
AluI AGCT 8 cut(s) 121, 328, 572, 695, 722, 1884, 2084, 2418
Alw21I GWGCWC 2 cut(s) 1590, 2420
AlwI GGATC 5 cut(s) 49, 196, 1640, 1730, 2207
Aor51HI AGCGCT 1 cut(s) 397
AoxI GGCC 2 cut(s) 1239, 1920
ApaI GGGCCC 1 cut(s) 1924
ApoI RAATTY 3 cut(s) 514, 907, 2148
ArsI GACNNNNNNTTYG 2 cut(s) 609, 641
AsiGI ACCGGT 1 cut(s) 544
Asp700I GAANNNNTTC 1 cut(s) 370
Asp718I GGTACC 1 cut(s) 407
AspA2I CCTAGG 2 cut(s) 640, 1901
AspLEI GCGC 4 cut(s) 398, 1293, 1810, 2030
AspS9I GGNCC 6 cut(s) 449, 668, 890, 1240, 1920, 1921
AsuHPI GGTGA 7 cut(s) 974, 1144, 1711, 1723, 1763, 2251, 2384
AvaII GGWCC 3 cut(s) 449, 668, 890
AvrII CCTAGG 2 cut(s) 640, 1901
BaeGI GKGCMC 1 cut(s) 1924
BanI GGYRCC 1 cut(s) 407
BanII GRGCYC 3 cut(s) 1734, 1924, 2420
BauI CACGAG 1 cut(s) 580
Bbv12I GWGCWC 2 cut(s) 1590, 2420
BbvCI CCTCAGC 1 cut(s) 117
BccI CCATC 6 cut(s) 82, 760, 1205, 1649, 2288, 2453
BciT130I CCWGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
BciVI GTATCC 1 cut(s) 740
BcuI ACTAGT 1 cut(s) 506
BfaI CTAG 5 cut(s) 507, 641, 1182, 1902, 2548
BfoI RGCGCY 2 cut(s) 399, 2031
BfuI GTATCC 1 cut(s) 740
BglII AGATCT 1 cut(s) 1031
BlnI CCTAGG 2 cut(s) 640, 1901
BlpI GCTNAGC 1 cut(s) 2085
Bme1390I CCNGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
Bme18I GGWCC 3 cut(s) 449, 668, 890
BmgT120I GGNCC 6 cut(s) 449, 668, 890, 1240, 1920, 1921
BmiI GGNNCC 7 cut(s) 409, 451, 669, 814, 1560, 1731, 1922
BmrFI CCNGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
BmrI ACTGGG 1 cut(s) 315
BmsI GCATC 4 cut(s) 626, 643, 1211, 2463
BmuI ACTGGG 1 cut(s) 315
BpmI CTGGAG 2 cut(s) 1748, 2052
Bpu10I CCTNAGC 1 cut(s) 117
Bpu1102I GCTNAGC 1 cut(s) 2085
BpuEI CTTGAG 1 cut(s) 2087
Bsa29I ATCGAT 1 cut(s) 2457
BsaBI GATNNNNATC 1 cut(s) 751
BsaWI WCCGGW 1 cut(s) 544
BsaXI ACNNNNNCTCC 2 cut(s) 2292, 2322
Bsc4I CCNNNNNNNGG 8 cut(s) 64, 704, 1655, 1753, 1907, 1930, 1936, 2294
Bse118I RCCGGY 1 cut(s) 544
Bse3DI GCAATG 3 cut(s) 39, 1129, 1360
Bse8I GATNNNNATC 1 cut(s) 751
BseBI CCWGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
BseCI ATCGAT 1 cut(s) 2457
BseGI GGATG 6 cut(s) 283, 1216, 1261, 1535, 2470, 2548
BseJI GATNNNNATC 1 cut(s) 751
BseLI CCNNNNNNNGG 8 cut(s) 64, 704, 1655, 1753, 1907, 1930, 1936, 2294
BseMI GCAATG 3 cut(s) 39, 1129, 1360
BseMII CTCAG 8 cut(s) 131, 506, 873, 1560, 1603, 1947, 2076, 2332
BseRI GAGGAG 2 cut(s) 951, 2300
BseSI GKGCMC 1 cut(s) 1924
Bsh1236I CGCG 1 cut(s) 2422
Bsh1285I CGRYCG 1 cut(s) 2245
BshFI GGCC 2 cut(s) 1241, 1922
BshNI GGYRCC 1 cut(s) 407
BshTI ACCGGT 1 cut(s) 544
BshVI ATCGAT 1 cut(s) 2457
BsiEI CGRYCG 1 cut(s) 2245
BsiHKAI GWGCWC 2 cut(s) 1590, 2420
BsiSI CCGG 1 cut(s) 545
BslFI GGGAC 1 cut(s) 754
BslI CCNNNNNNNGG 8 cut(s) 64, 704, 1655, 1753, 1907, 1930, 1936, 2294
BsmFI GGGAC 1 cut(s) 754
BsmI GAATGC 3 cut(s) 210, 949, 1969
BsnI GGCC 2 cut(s) 1241, 1922
Bsp120I GGGCCC 1 cut(s) 1920
Bsp1286I GDGCHC 4 cut(s) 1590, 1734, 1924, 2420
Bsp1407I TGTACA 1 cut(s) 535
Bsp1720I GCTNAGC 1 cut(s) 2085
Bsp19I CCATGG 1 cut(s) 1341
BspACI CCGC 4 cut(s) 311, 788, 1427, 2344
BspANI GGCC 2 cut(s) 1241, 1922
BspCNI CTCAG 8 cut(s) 130, 505, 874, 1561, 1602, 1948, 2077, 2331
BspDI ATCGAT 1 cut(s) 2457
BspFNI CGCG 1 cut(s) 2422
BspHI TCATGA 1 cut(s) 1846
BspLI GGNNCC 7 cut(s) 409, 451, 669, 814, 1560, 1731, 1922
BspPI GGATC 5 cut(s) 49, 196, 1640, 1730, 2207
BspT107I GGYRCC 1 cut(s) 407
BsrBI CCGCTC 1 cut(s) 2346
BsrDI GCAATG 3 cut(s) 39, 1129, 1360
BsrFI RCCGGY 1 cut(s) 544
BsrGI TGTACA 1 cut(s) 535
BssAI RCCGGY 1 cut(s) 544
BssNAI GTATAC 1 cut(s) 1046
BssSI CACGAG 1 cut(s) 580
BssT1I CCWWGG 5 cut(s) 361, 640, 1341, 1747, 1901
Bst1107I GTATAC 1 cut(s) 1046
Bst2BI CACGAG 1 cut(s) 580
Bst2UI CCWGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
Bst6I CTCTTC 3 cut(s) 1184, 2336, 2344
BstAUI TGTACA 1 cut(s) 535
BstC8I GCNNGC 5 cut(s) 574, 1661, 2082, 2229, 2420
BstDSI CCRYGG 6 cut(s) 1341, 1395, 1422, 1449, 1476, 1503
BstENI CCTNNNNNAGG 1 cut(s) 1928
BstF5I GGATG 6 cut(s) 283, 1216, 1261, 1535, 2470, 2548
BstFNI CGCG 1 cut(s) 2422
BstH2I RGCGCY 2 cut(s) 399, 2031
BstHHI GCGC 4 cut(s) 398, 1293, 1810, 2030
BstMCI CGRYCG 1 cut(s) 2245
BstNI CCWGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
BstNSI RCATGY 3 cut(s) 1663, 1680, 1791
BstSCI CCNGG 6 cut(s) 1025, 1538, 1699, 1721, 1916, 1929
BstSLI GKGCMC 1 cut(s) 1924
BstUI CGCG 1 cut(s) 2422
BstX2I RGATCY 2 cut(s) 54, 1031
BstYI RGATCY 2 cut(s) 54, 1031
BstZ17I GTATAC 1 cut(s) 1046
Bsu15I ATCGAT 1 cut(s) 2457
BsuI GTATCC 1 cut(s) 740
BsuRI GGCC 2 cut(s) 1241, 1922
BsuTUI ATCGAT 1 cut(s) 2457
BtgI CCRYGG 6 cut(s) 1341, 1395, 1422, 1449, 1476, 1503
BtsCI GGATG 6 cut(s) 283, 1216, 1261, 1535, 2470, 2548
BtsI GCAGTG 1 cut(s) 1173
Cac8I GCNNGC 5 cut(s) 574, 1661, 2082, 2229, 2420
CciI TCATGA 1 cut(s) 1846
CfoI GCGC 4 cut(s) 398, 1293, 1810, 2030
Cfr10I RCCGGY 1 cut(s) 544
Cfr13I GGNCC 6 cut(s) 449, 668, 890, 1240, 1920, 1921
ClaI ATCGAT 1 cut(s) 2457
CseI GACGC 2 cut(s) 1007, 1677
Csp6I GTAC 3 cut(s) 408, 536, 595
CspAI ACCGGT 1 cut(s) 544
CspCI CAANNNNNGTGG 2 cut(s) 2149, 2184
CviAII CATG 7 cut(s) 1342, 1531, 1632, 1660, 1677, 1788, 1847
CviQI GTAC 3 cut(s) 408, 536, 595
DraI TTTAAA 2 cut(s) 73, 1618
Eam1104I CTCTTC 3 cut(s) 1184, 2336, 2344
EarI CTCTTC 3 cut(s) 1184, 2336, 2344
EciI GGCGGA 2 cut(s) 326, 1442
Ecl136II GAGCTC 1 cut(s) 2418
Eco130I CCWWGG 5 cut(s) 361, 640, 1341, 1747, 1901
Eco24I GRGCYC 3 cut(s) 1734, 1924, 2420
Eco47I GGWCC 3 cut(s) 449, 668, 890
Eco47III AGCGCT 1 cut(s) 397
Eco53kI GAGCTC 1 cut(s) 2418
Eco57I CTGAAG 5 cut(s) 200, 822, 917, 1026, 1836
EcoICRI GAGCTC 1 cut(s) 2418
EcoNI CCTNNNNNAGG 1 cut(s) 1928
EcoO109I RGGNCCY 1 cut(s) 1921
EcoRI GAATTC 1 cut(s) 907
EcoRII CCWGG 6 cut(s) 1025, 1538, 1699, 1721, 1916, 1929
EcoT14I CCWWGG 5 cut(s) 361, 640, 1341, 1747, 1901
EcoT22I ATGCAT 2 cut(s) 1204, 1678
EcoT38I GRGCYC 3 cut(s) 1734, 1924, 2420
ErhI CCWWGG 5 cut(s) 361, 640, 1341, 1747, 1901
FaeI CATG 7 cut(s) 1345, 1534, 1635, 1663, 1680, 1791, 1850
FalI AAGNNNNNCTT 2 cut(s) 1676, 1708
FaqI GGGAC 1 cut(s) 754
FatI CATG 7 cut(s) 1341, 1530, 1631, 1659, 1676, 1787, 1846
FauI CCCGC 1 cut(s) 2351
FblI GTMKAC 1 cut(s) 1045
FokI GGATG 5 cut(s) 270, 1223, 1268, 1522, 2477
FriOI GRGCYC 3 cut(s) 1734, 1924, 2420
FspBI CTAG 5 cut(s) 507, 641, 1182, 1902, 2548
GlaI GCGC 4 cut(s) 397, 1292, 1809, 2029
GsuI CTGGAG 2 cut(s) 1748, 2052
HaeII RGCGCY 2 cut(s) 399, 2031
HaeIII GGCC 2 cut(s) 1241, 1922
HapII CCGG 1 cut(s) 545
HgaI GACGC 2 cut(s) 1007, 1677
HhaI GCGC 4 cut(s) 398, 1293, 1810, 2030
Hin1II CATG 7 cut(s) 1345, 1534, 1635, 1663, 1680, 1791, 1850
Hin6I GCGC 4 cut(s) 396, 1291, 1808, 2028
HinP1I GCGC 4 cut(s) 396, 1291, 1808, 2028
HindIII AAGCTT 1 cut(s) 720
HinfI GANTC 9 cut(s) 108, 220, 618, 645, 674, 685, 884, 956, 2473
HpaII CCGG 1 cut(s) 545
HphI GGTGA 7 cut(s) 974, 1144, 1711, 1723, 1763, 2251, 2384
Hpy166II GTNNAC 5 cut(s) 160, 303, 587, 893, 1046
Hpy8I GTNNAC 5 cut(s) 160, 303, 587, 893, 1046
HpyAV CCTTC 7 cut(s) 172, 797, 1011, 1900, 2171, 2283, 2298
HpyCH4IV ACGT 2 cut(s) 499, 779
HpySE526I ACGT 2 cut(s) 499, 779
Hsp92II CATG 7 cut(s) 1345, 1534, 1635, 1663, 1680, 1791, 1850
HspAI GCGC 4 cut(s) 396, 1291, 1808, 2028
KpnI GGTACC 1 cut(s) 411
LmnI GCTCC 4 cut(s) 77, 700, 812, 1729
LweI GCATC 4 cut(s) 626, 643, 1211, 2463
MaeI CTAG 5 cut(s) 507, 641, 1182, 1902, 2548
MaeII ACGT 2 cut(s) 499, 779
MaeIII GTNAC 7 cut(s) 495, 500, 1019, 1320, 1602, 2156, 2257
MbiI CCGCTC 1 cut(s) 2346
MboII GAAGA 9 cut(s) 206, 702, 747, 1026, 1201, 1829, 2259, 2323, 2331
MflI RGATCY 2 cut(s) 54, 1031
MhlI GDGCHC 4 cut(s) 1590, 1734, 1924, 2420
MluCI AATT 9 cut(s) 141, 227, 514, 855, 907, 1268, 1314, 1334, 2148
MlyI GAGTC 3 cut(s) 102, 612, 893
MmeI TCCRAC 1 cut(s) 832
Mph1103I ATGCAT 2 cut(s) 1204, 1678
MroXI GAANNNNTTC 1 cut(s) 370
MseI TTAA 7 cut(s) 72, 140, 324, 401, 438, 1197, 1617
MslI CAYNNNNRTG 2 cut(s) 462, 509
MspA1I CMGCKG 1 cut(s) 2084
MspI CCGG 1 cut(s) 545
MspR9I CCNGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
Mva1269I GAATGC 3 cut(s) 210, 949, 1969
MvaI CCWGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
MvnI CGCG 1 cut(s) 2422
NcoI CCATGG 1 cut(s) 1341
NlaIII CATG 7 cut(s) 1345, 1534, 1635, 1663, 1680, 1791, 1850
NlaIV GGNNCC 7 cut(s) 409, 451, 669, 814, 1560, 1731, 1922
NmuCI GTSAC 3 cut(s) 495, 1019, 2257
NsiI ATGCAT 2 cut(s) 1204, 1678
NspI RCATGY 3 cut(s) 1663, 1680, 1791
OliI CACNNNNGTG 1 cut(s) 509
PaeI GCATGC 1 cut(s) 1663
PagI TCATGA 1 cut(s) 1846
PctI GAATGC 3 cut(s) 210, 949, 1969
PdmI GAANNNNTTC 1 cut(s) 370
PfeI GAWTC 6 cut(s) 220, 645, 674, 685, 956, 2473
PflMI CCANNNNNTGG 1 cut(s) 1655
PinAI ACCGGT 1 cut(s) 544
Ple19I CGATCG 1 cut(s) 2245
PleI GAGTC 3 cut(s) 102, 612, 892
PpsI GAGTC 3 cut(s) 102, 612, 892
Psp124BI GAGCTC 1 cut(s) 2420
Psp6I CCWGG 6 cut(s) 1025, 1538, 1699, 1721, 1916, 1929
PspGI CCWGG 6 cut(s) 1025, 1538, 1699, 1721, 1916, 1929
PspN4I GGNNCC 7 cut(s) 409, 451, 669, 814, 1560, 1731, 1922
PspOMI GGGCCC 1 cut(s) 1920
PspPI GGNCC 6 cut(s) 449, 668, 890, 1240, 1920, 1921
PsrI GAACNNNNNNTAC 2 cut(s) 141, 173
PsuI RGATCY 2 cut(s) 54, 1031
PvuI CGATCG 1 cut(s) 2245
PvuII CAGCTG 1 cut(s) 2084
RsaI GTAC 3 cut(s) 409, 537, 596
RsaNI GTAC 3 cut(s) 408, 536, 595
RseI CAYNNNNRTG 2 cut(s) 462, 509
SacI GAGCTC 1 cut(s) 2420
SaqAI TTAA 7 cut(s) 72, 140, 324, 401, 438, 1197, 1617
Sau96I GGNCC 6 cut(s) 449, 668, 890, 1240, 1920, 1921
SchI GAGTC 3 cut(s) 102, 612, 893
ScrFI CCNGG 6 cut(s) 1027, 1540, 1701, 1723, 1918, 1931
SduI GDGCHC 4 cut(s) 1590, 1734, 1924, 2420
SfaNI GCATC 4 cut(s) 626, 643, 1211, 2463
SinI GGWCC 3 cut(s) 449, 668, 890
SmiMI CAYNNNNRTG 2 cut(s) 462, 509
SmlI CTYRAG 1 cut(s) 2102
SmoI CTYRAG 1 cut(s) 2102
SpeI ACTAGT 1 cut(s) 506
SphI GCATGC 1 cut(s) 1663
Sse9I AATT 9 cut(s) 141, 227, 514, 855, 907, 1268, 1314, 1334, 2148
SsiI CCGC 4 cut(s) 311, 788, 1427, 2344
SspI AATATT 1 cut(s) 487
SspMI CTAG 5 cut(s) 507, 641, 1182, 1902, 2548
SstI GAGCTC 1 cut(s) 2420
StyD4I CCNGG 6 cut(s) 1025, 1538, 1699, 1721, 1916, 1929
StyI CCWWGG 5 cut(s) 361, 640, 1341, 1747, 1901
TaiI ACGT 2 cut(s) 502, 782
TaqI TCGA 5 cut(s) 616, 1554, 2241, 2245, 2457
TasI AATT 9 cut(s) 141, 227, 514, 855, 907, 1268, 1314, 1334, 2148
TatI WGTACW 1 cut(s) 535
TauI GCSGC 1 cut(s) 791
TfiI GAWTC 6 cut(s) 220, 645, 674, 685, 956, 2473
Tru1I TTAA 7 cut(s) 72, 140, 324, 401, 438, 1197, 1617
Tru9I TTAA 7 cut(s) 72, 140, 324, 401, 438, 1197, 1617
TseFI GTSAC 3 cut(s) 495, 1019, 2257
Tsp45I GTSAC 3 cut(s) 495, 1019, 2257
TspDTI ATGAA 6 cut(s) 252, 272, 1080, 1116, 1326, 1347
TspGWI ACGGA 5 cut(s) 1384, 1411, 1438, 1465, 1492
Van91I CCANNNNNTGG 1 cut(s) 1655
VpaK11BI GGWCC 3 cut(s) 449, 668, 890
XagI CCTNNNNNAGG 1 cut(s) 1928
XapI RAATTY 3 cut(s) 514, 907, 2148
XceI RCATGY 3 cut(s) 1663, 1680, 1791
XmaJI CCTAGG 2 cut(s) 640, 1901
XmiI GTMKAC 1 cut(s) 1045
XmnI GAANNNNTTC 1 cut(s) 370
XspI CTAG 5 cut(s) 507, 641, 1182, 1902, 2548
Zsp2I ATGCAT 2 cut(s) 1204, 1678
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.