Domain of unknown function (DUF3444)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 2495 |
| AccB1I | GGYRCC | 1 cut(s) | 1634 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1481 |
| AccI | GTMKAC | 1 cut(s) | 1073 |
| AciI | CCGC | 4 cut(s) | 311, 1061, 1127, 2354 |
| AclI | AACGTT | 1 cut(s) | 1308 |
| AclWI | GGATC | 4 cut(s) | 1010, 1385, 1466, 2030 |
| AcsI | RAATTY | 6 cut(s) | 210, 1268, 1348, 1397, 1971, 2263 |
| AcuI | CTGAAG | 6 cut(s) | 66, 200, 402, 891, 1662, 2127 |
| AfaI | GTAC | 6 cut(s) | 26, 423, 1625, 1938, 1996, 2478 |
| AfeI | AGCGCT | 1 cut(s) | 371 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 443, 1481, 1730, 1759 |
| AflIII | ACRYGT | 1 cut(s) | 2225 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 516, 1080, 1318 |
| AjnI | CCWGG | 4 cut(s) | 115, 1525, 1547, 1739 |
| Alw21I | GWGCWC | 2 cut(s) | 400, 637 |
| Alw26I | GTCTC | 2 cut(s) | 882, 2432 |
| AlwI | GGATC | 4 cut(s) | 1010, 1385, 1466, 2030 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 647, 1997 |
| Aor51HI | AGCGCT | 1 cut(s) | 371 |
| AoxI | GGCC | 2 cut(s) | 976, 1743 |
| ApaI | GGGCCC | 1 cut(s) | 1747 |
| ApoI | RAATTY | 6 cut(s) | 210, 1268, 1348, 1397, 1971, 2263 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1517 |
| AspLEI | GCGC | 1 cut(s) | 372 |
| AspS9I | GGNCC | 3 cut(s) | 866, 1743, 1744 |
| AsuHPI | GGTGA | 4 cut(s) | 1277, 1294, 1537, 2430 |
| AsuII | TTCGAA | 1 cut(s) | 2078 |
| AvaII | GGWCC | 1 cut(s) | 866 |
| BaeGI | GKGCMC | 1 cut(s) | 1747 |
| BanI | GGYRCC | 1 cut(s) | 1634 |
| BanII | GRGCYC | 5 cut(s) | 400, 1465, 1560, 1747, 1785 |
| BbsI | GAAGAC | 2 cut(s) | 2087, 2307 |
| Bbv12I | GWGCWC | 2 cut(s) | 400, 637 |
| BccI | CCATC | 7 cut(s) | 82, 433, 784, 1040, 1124, 1328, 1475 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1775, 1809 |
| BciT130I | CCWGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| BciVI | GTATCC | 1 cut(s) | 1417 |
| BcoDI | GTCTC | 2 cut(s) | 882, 2432 |
| BfaI | CTAG | 6 cut(s) | 1229, 1341, 1478, 1553, 2276, 2337 |
| BfoI | RGCGCY | 1 cut(s) | 373 |
| BfuAI | ACCTGC | 1 cut(s) | 2495 |
| BfuI | GTATCC | 1 cut(s) | 1417 |
| BglII | AGATCT | 2 cut(s) | 992, 2231 |
| BlpI | GCTNAGC | 1 cut(s) | 2179 |
| Bme1390I | CCNGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| Bme18I | GGWCC | 1 cut(s) | 866 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 516, 1080, 1318 |
| BmgT120I | GGNCC | 3 cut(s) | 866, 1743, 1744 |
| BmiI | GGNNCC | 3 cut(s) | 1386, 1636, 1745 |
| BmrFI | CCNGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| BmrI | ACTGGG | 1 cut(s) | 1554 |
| BmsI | GCATC | 6 cut(s) | 45, 818, 829, 830, 1668, 2497 |
| BmuI | ACTGGG | 1 cut(s) | 1554 |
| BpiI | GAAGAC | 2 cut(s) | 2087, 2307 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2179 |
| Bpu14I | TTCGAA | 1 cut(s) | 2078 |
| BpuEI | CTTGAG | 4 cut(s) | 143, 384, 591, 2271 |
| Bsa29I | ATCGAT | 1 cut(s) | 565 |
| BsaAI | YACGTR | 1 cut(s) | 2228 |
| BsaJI | CCNNGG | 6 cut(s) | 115, 116, 891, 1323, 1740, 2441 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1424, 1454 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 443, 1481, 1730, 1759 |
| Bse1I | ACTGG | 7 cut(s) | 206, 415, 733, 772, 1267, 1560, 2055 |
| Bse3DI | GCAATG | 2 cut(s) | 39, 979 |
| BseBI | CCWGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| BseCI | ATCGAT | 1 cut(s) | 565 |
| BseDI | CCNNGG | 6 cut(s) | 115, 116, 891, 1323, 1740, 2441 |
| BseGI | GGATG | 5 cut(s) | 283, 433, 637, 776, 1135 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 443, 1481, 1730, 1759 |
| BseMI | GCAATG | 2 cut(s) | 39, 979 |
| BseMII | CTCAG | 6 cut(s) | 494, 641, 1529, 1770, 2175, 2443 |
| BseNI | ACTGG | 7 cut(s) | 206, 415, 733, 772, 1267, 1560, 2055 |
| BseSI | GKGCMC | 1 cut(s) | 1747 |
| BshFI | GGCC | 2 cut(s) | 978, 1745 |
| BshNI | GGYRCC | 1 cut(s) | 1634 |
| BshVI | ATCGAT | 1 cut(s) | 565 |
| BsiHKAI | GWGCWC | 2 cut(s) | 400, 637 |
| BslFI | GGGAC | 2 cut(s) | 475, 2448 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 443, 1481, 1730, 1759 |
| BsmAI | GTCTC | 2 cut(s) | 882, 2432 |
| BsmFI | GGGAC | 2 cut(s) | 475, 2448 |
| BsmI | GAATGC | 2 cut(s) | 1123, 1491 |
| BsnI | GGCC | 2 cut(s) | 978, 1745 |
| Bsp119I | TTCGAA | 1 cut(s) | 2078 |
| Bsp120I | GGGCCC | 1 cut(s) | 1743 |
| Bsp1286I | GDGCHC | 6 cut(s) | 400, 637, 1465, 1560, 1747, 1785 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2179 |
| BspACI | CCGC | 4 cut(s) | 311, 1061, 1127, 2354 |
| BspANI | GGCC | 2 cut(s) | 978, 1745 |
| BspCNI | CTCAG | 6 cut(s) | 493, 640, 1530, 1771, 2176, 2442 |
| BspDI | ATCGAT | 1 cut(s) | 565 |
| BspLI | GGNNCC | 3 cut(s) | 1386, 1636, 1745 |
| BspMI | ACCTGC | 1 cut(s) | 2495 |
| BspPI | GGATC | 4 cut(s) | 1010, 1385, 1466, 2030 |
| BspT104I | TTCGAA | 1 cut(s) | 2078 |
| BspT107I | GGYRCC | 1 cut(s) | 1634 |
| BsrDI | GCAATG | 2 cut(s) | 39, 979 |
| BsrI | ACTGG | 7 cut(s) | 206, 415, 733, 772, 1267, 1560, 2055 |
| BssECI | CCNNGG | 6 cut(s) | 115, 116, 891, 1323, 1740, 2441 |
| BssT1I | CCWWGG | 3 cut(s) | 891, 1323, 2441 |
| Bst2UI | CCWGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| Bst4CI | ACNGT | 4 cut(s) | 148, 164, 489, 2117 |
| Bst6I | CTCTTC | 1 cut(s) | 116 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2516 |
| BstBAI | YACGTR | 1 cut(s) | 2228 |
| BstBI | TTCGAA | 1 cut(s) | 2078 |
| BstC8I | GCNNGC | 4 cut(s) | 270, 1794, 2512, 2521 |
| BstDEI | CTNAG | 9 cut(s) | 480, 627, 1538, 1725, 1779, 2179, 2184, 2429, 2550 |
| BstF5I | GGATG | 5 cut(s) | 283, 433, 637, 776, 1135 |
| BstH2I | RGCGCY | 1 cut(s) | 373 |
| BstHHI | GCGC | 1 cut(s) | 372 |
| BstMAI | GTCTC | 2 cut(s) | 882, 2432 |
| BstNI | CCWGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| BstNSI | RCATGY | 1 cut(s) | 1796 |
| BstSCI | CCNGG | 4 cut(s) | 115, 1525, 1547, 1739 |
| BstSLI | GKGCMC | 1 cut(s) | 1747 |
| BstV2I | GAAGAC | 2 cut(s) | 2087, 2307 |
| BstX2I | RGATCY | 2 cut(s) | 992, 2231 |
| BstYI | RGATCY | 2 cut(s) | 992, 2231 |
| Bsu15I | ATCGAT | 1 cut(s) | 565 |
| BsuI | GTATCC | 1 cut(s) | 1417 |
| BsuRI | GGCC | 2 cut(s) | 978, 1745 |
| BsuTUI | ATCGAT | 1 cut(s) | 565 |
| BtsCI | GGATG | 5 cut(s) | 283, 433, 637, 776, 1135 |
| BtsI | GCAGTG | 2 cut(s) | 1681, 1702 |
| BtsIMutI | CAGTG | 7 cut(s) | 160, 726, 765, 942, 1638, 1681, 1702 |
| BveI | ACCTGC | 1 cut(s) | 2495 |
| Cac8I | GCNNGC | 4 cut(s) | 270, 1794, 2512, 2521 |
| CaiI | CAGNNNCTG | 2 cut(s) | 647, 1997 |
| CfoI | GCGC | 1 cut(s) | 372 |
| Cfr13I | GGNCC | 3 cut(s) | 866, 1743, 1744 |
| ClaI | ATCGAT | 1 cut(s) | 565 |
| Csp6I | GTAC | 6 cut(s) | 25, 422, 1624, 1937, 1995, 2477 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 166, 201, 2041, 2076 |
| CviAII | CATG | 7 cut(s) | 65, 385, 1411, 1793, 1847, 1916, 2516 |
| CviQI | GTAC | 6 cut(s) | 25, 422, 1624, 1937, 1995, 2477 |
| DdeI | CTNAG | 9 cut(s) | 480, 627, 1538, 1725, 1779, 2179, 2184, 2429, 2550 |
| DriI | GACNNNNNGTC | 3 cut(s) | 516, 1080, 1318 |
| Eam1104I | CTCTTC | 1 cut(s) | 116 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 516, 1080, 1318 |
| EarI | CTCTTC | 1 cut(s) | 116 |
| EciI | GGCGGA | 1 cut(s) | 1050 |
| Ecl136II | GAGCTC | 1 cut(s) | 398 |
| Eco130I | CCWWGG | 3 cut(s) | 891, 1323, 2441 |
| Eco24I | GRGCYC | 5 cut(s) | 400, 1465, 1560, 1747, 1785 |
| Eco47I | GGWCC | 1 cut(s) | 866 |
| Eco47III | AGCGCT | 1 cut(s) | 371 |
| Eco53kI | GAGCTC | 1 cut(s) | 398 |
| Eco57I | CTGAAG | 6 cut(s) | 66, 200, 402, 891, 1662, 2127 |
| EcoICRI | GAGCTC | 1 cut(s) | 398 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1744 |
| EcoRI | GAATTC | 3 cut(s) | 210, 1397, 1971 |
| EcoRII | CCWGG | 4 cut(s) | 115, 1525, 1547, 1739 |
| EcoT14I | CCWWGG | 3 cut(s) | 891, 1323, 2441 |
| EcoT38I | GRGCYC | 5 cut(s) | 400, 1465, 1560, 1747, 1785 |
| ErhI | CCWWGG | 3 cut(s) | 891, 1323, 2441 |
| FaeI | CATG | 7 cut(s) | 68, 388, 1414, 1796, 1850, 1919, 2519 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2203, 2235 |
| FaqI | GGGAC | 2 cut(s) | 475, 2448 |
| FatI | CATG | 7 cut(s) | 64, 384, 1410, 1792, 1846, 1915, 2515 |
| FblI | GTMKAC | 1 cut(s) | 1073 |
| FokI | GGATG | 5 cut(s) | 270, 420, 624, 763, 1142 |
| FriOI | GRGCYC | 5 cut(s) | 400, 1465, 1560, 1747, 1785 |
| FspBI | CTAG | 6 cut(s) | 1229, 1341, 1478, 1553, 2276, 2337 |
| GlaI | GCGC | 1 cut(s) | 371 |
| HaeII | RGCGCY | 1 cut(s) | 373 |
| HaeIII | GGCC | 2 cut(s) | 978, 1745 |
| HhaI | GCGC | 1 cut(s) | 372 |
| Hin1II | CATG | 7 cut(s) | 68, 388, 1414, 1796, 1850, 1919, 2519 |
| Hin6I | GCGC | 1 cut(s) | 370 |
| HinP1I | GCGC | 1 cut(s) | 370 |
| HincII | GTYRAC | 3 cut(s) | 1074, 1157, 1312 |
| HindII | GTYRAC | 3 cut(s) | 1074, 1157, 1312 |
| HphI | GGTGA | 4 cut(s) | 1277, 1294, 1537, 2430 |
| Hpy166II | GTNNAC | 7 cut(s) | 160, 956, 1074, 1157, 1190, 1312, 1626 |
| Hpy8I | GTNNAC | 7 cut(s) | 160, 956, 1074, 1157, 1190, 1312, 1626 |
| Hpy99I | CGWCG | 2 cut(s) | 442, 1078 |
| HpyAV | CCTTC | 6 cut(s) | 927, 968, 969, 1279, 1723, 2353 |
| HpyCH4III | ACNGT | 4 cut(s) | 148, 164, 489, 2117 |
| HpyCH4IV | ACGT | 6 cut(s) | 546, 1308, 1427, 1457, 1576, 2227 |
| HpyF3I | CTNAG | 9 cut(s) | 480, 627, 1538, 1725, 1779, 2179, 2184, 2429, 2550 |
| HpySE526I | ACGT | 6 cut(s) | 546, 1308, 1427, 1457, 1576, 2227 |
| Hsp92II | CATG | 7 cut(s) | 68, 388, 1414, 1796, 1850, 1919, 2519 |
| HspAI | GCGC | 1 cut(s) | 370 |
| LmnI | GCTCC | 2 cut(s) | 77, 576 |
| LweI | GCATC | 6 cut(s) | 45, 818, 829, 830, 1668, 2497 |
| MaeI | CTAG | 6 cut(s) | 1229, 1341, 1478, 1553, 2276, 2337 |
| MaeII | ACGT | 6 cut(s) | 546, 1308, 1427, 1457, 1576, 2227 |
| MflI | RGATCY | 2 cut(s) | 992, 2231 |
| MhlI | GDGCHC | 6 cut(s) | 400, 637, 1465, 1560, 1747, 1785 |
| MlyI | GAGTC | 2 cut(s) | 102, 1066 |
| MmeI | TCCRAC | 3 cut(s) | 1410, 1809, 2526 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1517 |
| MseI | TTAA | 6 cut(s) | 324, 849, 1533, 2156, 2271, 2450 |
| MspR9I | CCNGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| Mva1269I | GAATGC | 2 cut(s) | 1123, 1491 |
| MvaI | CCWGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| NlaIII | CATG | 7 cut(s) | 68, 388, 1414, 1796, 1850, 1919, 2519 |
| NlaIV | GGNNCC | 3 cut(s) | 1386, 1636, 1745 |
| NmuCI | GTSAC | 5 cut(s) | 483, 1357, 1592, 2126, 2215 |
| NspI | RCATGY | 1 cut(s) | 1796 |
| NspV | TTCGAA | 1 cut(s) | 2078 |
| PaeI | GCATGC | 1 cut(s) | 1796 |
| PasI | CCCWGGG | 1 cut(s) | 116 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 571 |
| PctI | GAATGC | 2 cut(s) | 1123, 1491 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1517 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1481 |
| PfoI | TCCNGGA | 1 cut(s) | 1525 |
| PleI | GAGTC | 2 cut(s) | 102, 1065 |
| PpsI | GAGTC | 2 cut(s) | 102, 1065 |
| Ppu21I | YACGTR | 1 cut(s) | 2228 |
| Psp124BI | GAGCTC | 1 cut(s) | 400 |
| Psp1406I | AACGTT | 1 cut(s) | 1308 |
| Psp6I | CCWGG | 4 cut(s) | 115, 1525, 1547, 1739 |
| PspGI | CCWGG | 4 cut(s) | 115, 1525, 1547, 1739 |
| PspN4I | GGNNCC | 3 cut(s) | 1386, 1636, 1745 |
| PspOMI | GGGCCC | 1 cut(s) | 1743 |
| PspPI | GGNCC | 3 cut(s) | 866, 1743, 1744 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2086, 2118 |
| PstNI | CAGNNNCTG | 2 cut(s) | 647, 1997 |
| PsuI | RGATCY | 2 cut(s) | 992, 2231 |
| RsaI | GTAC | 6 cut(s) | 26, 423, 1625, 1938, 1996, 2478 |
| RsaNI | GTAC | 6 cut(s) | 25, 422, 1624, 1937, 1995, 2477 |
| SacI | GAGCTC | 1 cut(s) | 400 |
| SalI | GTCGAC | 1 cut(s) | 1072 |
| SaqAI | TTAA | 6 cut(s) | 324, 849, 1533, 2156, 2271, 2450 |
| Sau96I | GGNCC | 3 cut(s) | 866, 1743, 1744 |
| SchI | GAGTC | 2 cut(s) | 102, 1066 |
| ScrFI | CCNGG | 4 cut(s) | 117, 1527, 1549, 1741 |
| SduI | GDGCHC | 6 cut(s) | 400, 637, 1465, 1560, 1747, 1785 |
| SfaNI | GCATC | 6 cut(s) | 45, 818, 829, 830, 1668, 2497 |
| SfuI | TTCGAA | 1 cut(s) | 2078 |
| SinI | GGWCC | 1 cut(s) | 866 |
| SmlI | CTYRAG | 4 cut(s) | 122, 399, 606, 2286 |
| SmoI | CTYRAG | 4 cut(s) | 122, 399, 606, 2286 |
| SphI | GCATGC | 1 cut(s) | 1796 |
| SsiI | CCGC | 4 cut(s) | 311, 1061, 1127, 2354 |
| SspMI | CTAG | 6 cut(s) | 1229, 1341, 1478, 1553, 2276, 2337 |
| SstI | GAGCTC | 1 cut(s) | 400 |
| StyD4I | CCNGG | 4 cut(s) | 115, 1525, 1547, 1739 |
| StyI | CCWWGG | 3 cut(s) | 891, 1323, 2441 |
| TaaI | ACNGT | 4 cut(s) | 148, 164, 489, 2117 |
| TaiI | ACGT | 6 cut(s) | 549, 1311, 1430, 1460, 1579, 2230 |
| TaqI | TCGA | 9 cut(s) | 440, 565, 670, 998, 1073, 1839, 1969, 2078, 2246 |
| TaqII | GACCGA | 1 cut(s) | 2150 |
| TatI | WGTACW | 1 cut(s) | 1623 |
| Tru1I | TTAA | 6 cut(s) | 324, 849, 1533, 2156, 2271, 2450 |
| Tru9I | TTAA | 6 cut(s) | 324, 849, 1533, 2156, 2271, 2450 |
| TscAI | CASTG | 7 cut(s) | 167, 733, 772, 949, 1645, 1688, 1702 |
| TseFI | GTSAC | 5 cut(s) | 483, 1357, 1592, 2126, 2215 |
| Tsp45I | GTSAC | 5 cut(s) | 483, 1357, 1592, 2126, 2215 |
| TspDTI | ATGAA | 9 cut(s) | 156, 272, 401, 782, 932, 987, 1041, 1399, 2059 |
| TspGWI | ACGGA | 4 cut(s) | 426, 563, 1091, 2099 |
| TspRI | CASTG | 7 cut(s) | 167, 733, 772, 949, 1645, 1688, 1702 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1481 |
| VpaK11BI | GGWCC | 1 cut(s) | 866 |
| XapI | RAATTY | 6 cut(s) | 210, 1268, 1348, 1397, 1971, 2263 |
| XbaI | TCTAGA | 2 cut(s) | 1228, 1340 |
| XceI | RCATGY | 1 cut(s) | 1796 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 504 |
| XmiI | GTMKAC | 1 cut(s) | 1073 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1517 |
| XspI | CTAG | 6 cut(s) | 1229, 1341, 1478, 1553, 2276, 2337 |