Rorug02G0647300

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000587
Physical Location & Seq
Forward (+)
75724896 .. 75727374
2479 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0647300.1

Sequence Viewer

Length: 1881 bp
ATGGCAACCGAGTTAGCGAGTCGAATAAGCCGAGTTCTGATCTCCGCTTCCAACAACACAAGGCCGACTCGCTCATGGAACCCTTCACTCGAGAACGCTCTTCACCGCCTCGGCTGCCGCGACTCACTGAGTCCACAACTCGTCGCCCGAGTCATCGATCCTTTCCTCCTCAACCACCACTCCCTCGCTCTCGGCTTCTTCAACTGGGCTTCCCAGCAGCCCTCCTTCTCCCACACCTCCACCACCTACCAATCAGTCCTCAAGTCTCTTTCTTTTTCCCGCCAATTTTCCGCCATTGATGCTCTGCTCAAGCAAGTCAGAGCCCAGAGAATCGGCCTCGATGCATCGGTCTATCGCTCCGTGATTGCTTCACTCATCATAGGAAAGAAAACCCACAATGCCTTTTTGGTGTTCGGCGAGGTTGGGATTGAAGATATTGGGCATGAGATTTGCAACTCACTCTTGGCTGCTCTGGCTTCTGATGGGTATTTGGAGCATGCCCAGAAGGTGTTTGATGAAATGACTCTGAGAGCTGTGCCTCTGAGCACCGCTGGATTTGGTGTGTTTGTGTGGCGGCTATGTGGAAACGCTGAATTGAGTAAGATATTGAGTACGCTAGATGAGGTTAGGAGGTGTGGTTGGTCGATCAATGGGTCCGTTGTAGCGCTTCTGATCATTCACGGGCTTTGTAGGGCTTCGAGAGTGTCAGAGGCTTTCTGGGTGCTGGATGAGCTGAGGAATAGAGAGTGCAAACCTGATTTCATGGCGTATAGGATTGTTGCTGAAGCTGTTCGGTCTACTGGGAATGTGGTTGATACAGAAAAGGTTTTGAAGAAGAAGAGAAAGCTAGGTGTGGCTCCGAGGAGTAGTGATTATAGGGAGTTCATACTTGGGTTGATTTCAGAGAGACGGATACATGAAGCCAAAGAGTTGGGAGAAGTGATAGTTAGTGGGAACTTTCCAATCGAAGATGATGTTCTCAATGTGTTGATAGGGTCAGTGTCAACTATTGATCCTGGCTCTGCAATGATGTTTTTCAAGTTCATGGTTGGAAAAGCGAGCTTCCCAACTCTTTTGACATTGAGCAATTTGTGTAGGAATCTAAGTAAGCGTAGCAACTCTGATGAATTGCTGGAAGTTTTCCAAGTTTTGTCTTCTGGTGAGTATTTTAAAGATTTGGAGACTTACAACGTGATGGTGTCATTCCTGTGCAAAGCAGGAATGGTGAAGGAAGCCTATGGGGTACTTCCAGAGATGAAGAAGAAAGGGTTAAGCCCAGATCTTTCAACTTATAATTCTCTTATTGAAGCATGTTGTAGAGAAGATCTATTGAGGCCTGCTAAAAGGCTGTGGGATGAGATGTTTGCAAATGGGTGCAGAGGAAATTTGAAGACTTACAGTATCTTAATTCATAAGTTTTCGGAAGTAGGCCCAGTTGATGAGGCTCTAACGCTCTTTTACCACATGTTGGGAAGAGAAGTTGCACCCGATGCGATGACTTACACAACTCTACTTGAAGGGCTTTGTCAAGACACAAAGCTTGAAGCTGCTTTGGAAGTTTTTGACAAGTGTGTTGAACAGGATTTGATGCTTGCCCAATCTGTGTTGGGTACATTTATCCTCACTTTATGCAAAGCAGGTCTTTTTCTTGCCGCTTCTAGGTTACTCTGCCGCCTCAGTTTTGATATAGCACATTCAGATTCTCATGTAGTTTTACTGAAATGTTTAGCCGATGCTAAAGAGATTCCACTGGCCATTGAACACATTAACTGGGTTCGCCAAGCTTCACCCTCCATGTTGCAAACTATTTCAAACGAACTAGCATCGATTTCTTCTACTCCAAGACCAGAGCCAATTTTACAGTTGCTTCAAACAATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

626

Amino Acids

69.5

Weight (kDa)

6.92

Isoelectric Point (pI)

37.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 392 - 440 3.4e-15 PPR repeat family
PPR_1 PF12854 392 - 420 1.9e-06 PPR repeat
PPR_3 PF13812 392 - 438 4.7e-07 Pentatricopeptide repeat domain
PPR_long PF17177 393 - 506 2.9e-08 Pentacotripeptide-repeat region of PRORP
PPR PF01535 395 - 424 4.6e-07 PPR repeat
PPR_1 PF12854 422 - 454 4.7e-09 PPR repeat
PPR_2 PF13041 428 - 473 1.3e-11 PPR repeat family
PPR PF01535 429 - 459 6.1e-06 PPR repeat
PPR_2 PF13041 469 - 510 2.4e-07 PPR repeat family
PPR_1 PF12854 493 - 523 7.8e-08 PPR repeat
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1293
Acc36I ACCTGC 1 cut(s) 1628
AccB7I CCANNNNNTGG 1 cut(s) 1468
AccI GTMKAC 1 cut(s) 797
AccII CGCG 1 cut(s) 120
AciI CCGC 9 cut(s) 45, 106, 118, 280, 291, 549, 574, 1653, 1672
AclWI GGATC 2 cut(s) 152, 1007
AcoI YGGCCR 1 cut(s) 1752
AcsI RAATTY 1 cut(s) 1384
AcuI CTGAAG 1 cut(s) 804
AfaI GTAC 3 cut(s) 613, 1245, 1612
AfeI AGCGCT 1 cut(s) 666
AfiI CCNNNNNNNGG 2 cut(s) 1468, 1659
AflIII ACRYGT 1 cut(s) 1464
AjnI CCWGG 1 cut(s) 1015
AluBI AGCT 8 cut(s) 533, 733, 788, 847, 1062, 1540, 1547, 1784
AluI AGCT 8 cut(s) 533, 733, 788, 847, 1062, 1540, 1547, 1784
Alw21I GWGCWC 1 cut(s) 548
Alw26I GTCTC 3 cut(s) 270, 901, 1175
AlwI GGATC 2 cut(s) 152, 1007
Ama87I CYCGRG 2 cut(s) 89, 147
Aor51HI AGCGCT 1 cut(s) 666
AoxI GGCC 5 cut(s) 62, 334, 1334, 1429, 1752
ApeKI GCWGC 4 cut(s) 114, 217, 467, 1547
ApoI RAATTY 1 cut(s) 1384
Asp700I GAANNNNTTC 1 cut(s) 789
AspLEI GCGC 1 cut(s) 667
AspS9I GGNCC 2 cut(s) 654, 1430
AsuHPI GGTGA 4 cut(s) 95, 1172, 1237, 1779
AvaI CYCGRG 2 cut(s) 89, 147
AvaII GGWCC 1 cut(s) 654
BalI TGGCCA 1 cut(s) 1754
BanII GRGCYC 1 cut(s) 325
BbsI GAAGAC 2 cut(s) 1146, 1397
Bbv12I GWGCWC 1 cut(s) 548
BbvCI CCTCAGC 1 cut(s) 734
BbvI GCAGC 4 cut(s) 101, 229, 454, 1534
BccI CCATC 2 cut(s) 476, 1189
BciT130I CCWGG 1 cut(s) 1017
BciVI GTATCC 1 cut(s) 906
BclI TGATCA 1 cut(s) 672
BcoDI GTCTC 3 cut(s) 270, 901, 1175
BfaI CTAG 4 cut(s) 617, 848, 1659, 1820
BfoI RGCGCY 1 cut(s) 668
BfuAI ACCTGC 1 cut(s) 1628
BfuI GTATCC 1 cut(s) 906
BglII AGATCT 2 cut(s) 1279, 1324
BisI GCNGC 8 cut(s) 115, 118, 218, 468, 575, 1548, 1653, 1672
BlsI GCNGC 8 cut(s) 116, 119, 219, 469, 576, 1549, 1654, 1673
Bme1390I CCNGG 1 cut(s) 1017
Bme18I GGWCC 1 cut(s) 654
BmeT110I CYCGRG 2 cut(s) 89, 147
BmgT120I GGNCC 2 cut(s) 654, 1430
BmiI GGNNCC 3 cut(s) 80, 655, 858
BmrFI CCNGG 1 cut(s) 1017
BmrI ACTGGG 4 cut(s) 214, 810, 1427, 1780
BmsI GCATC 7 cut(s) 289, 331, 353, 1480, 1578, 1723, 1832
BmuI ACTGGG 4 cut(s) 214, 810, 1427, 1780
BpiI GAAGAC 2 cut(s) 1146, 1397
Bpu10I CCTNAGC 1 cut(s) 734
BpuEI CTTGAG 2 cut(s) 245, 293
Bsa29I ATCGAT 2 cut(s) 156, 1826
BsaJI CCNNGG 2 cut(s) 109, 860
BsaXI ACNNNNNCTCC 4 cut(s) 164, 194, 622, 652
Bsc4I CCNNNNNNNGG 2 cut(s) 1468, 1659
Bse1I ACTGG 5 cut(s) 209, 805, 1433, 1755, 1775
Bse3DI GCAATG 1 cut(s) 1032
BseBI CCWGG 1 cut(s) 1017
BseCI ATCGAT 2 cut(s) 156, 1826
BseDI CCNNGG 2 cut(s) 109, 860
BseGI GGATG 2 cut(s) 733, 1360
BseLI CCNNNNNNNGG 2 cut(s) 1468, 1659
BseMI GCAATG 1 cut(s) 1032
BseMII CTCAG 5 cut(s) 119, 518, 533, 725, 1690
BseNI ACTGG 5 cut(s) 209, 805, 1433, 1755, 1775
BseRI GAGGAG 2 cut(s) 158, 877
BseXI GCAGC 4 cut(s) 101, 229, 454, 1534
BseYI CCCAGC 1 cut(s) 213
BsgI GTGCAG 1 cut(s) 1396
Bsh1236I CGCG 1 cut(s) 120
BshFI GGCC 5 cut(s) 64, 336, 1336, 1431, 1754
BshVI ATCGAT 2 cut(s) 156, 1826
BsiHKAI GWGCWC 1 cut(s) 548
BsiHKCI CYCGRG 2 cut(s) 89, 147
BslI CCNNNNNNNGG 2 cut(s) 1468, 1659
BsmAI GTCTC 3 cut(s) 270, 901, 1175
BsmBI CGTCTC 1 cut(s) 901
BsnI GGCC 5 cut(s) 64, 336, 1336, 1431, 1754
BsoBI CYCGRG 2 cut(s) 89, 147
Bsp1286I GDGCHC 2 cut(s) 325, 548
Bsp143I GATC 7 cut(s) 39, 157, 645, 672, 1012, 1279, 1324
BspACI CCGC 9 cut(s) 45, 106, 118, 280, 291, 549, 574, 1653, 1672
BspANI GGCC 5 cut(s) 64, 336, 1336, 1431, 1754
BspCNI CTCAG 5 cut(s) 120, 519, 534, 726, 1689
BspDI ATCGAT 2 cut(s) 156, 1826
BspFNI CGCG 1 cut(s) 120
BspLI GGNNCC 3 cut(s) 80, 655, 858
BspMI ACCTGC 1 cut(s) 1628
BspPI GGATC 2 cut(s) 152, 1007
BspQI GCTCTTC 1 cut(s) 105
BsrDI GCAATG 1 cut(s) 1032
BsrI ACTGG 5 cut(s) 209, 805, 1433, 1755, 1775
BssECI CCNNGG 2 cut(s) 109, 860
BssMI GATC 7 cut(s) 39, 157, 645, 672, 1012, 1279, 1324
Bst2UI CCWGG 1 cut(s) 1017
Bst4CI ACNGT 2 cut(s) 1400, 1863
Bst6I CTCTTC 3 cut(s) 105, 833, 1468
BstAPI GCANNNNNTGC 1 cut(s) 1490
BstC8I GCNNGC 4 cut(s) 498, 1060, 1338, 1593
BstDEI CTNAG 6 cut(s) 128, 527, 542, 734, 1103, 1676
BstF5I GGATG 2 cut(s) 733, 1360
BstFNI CGCG 1 cut(s) 120
BstH2I RGCGCY 1 cut(s) 668
BstHHI GCGC 1 cut(s) 667
BstKTI GATC 7 cut(s) 42, 160, 648, 675, 1015, 1282, 1327
BstMAI GTCTC 3 cut(s) 270, 901, 1175
BstMBI GATC 7 cut(s) 39, 157, 645, 672, 1012, 1279, 1324
BstMWI GCNNNNNNNGC 5 cut(s) 114, 299, 473, 730, 1490
BstNI CCWGG 1 cut(s) 1017
BstNSI RCATGY 3 cut(s) 500, 1314, 1468
BstSCI CCNGG 1 cut(s) 1015
BstUI CGCG 1 cut(s) 120
BstV1I GCAGC 4 cut(s) 101, 229, 454, 1534
BstV2I GAAGAC 2 cut(s) 1146, 1397
BstX2I RGATCY 2 cut(s) 1279, 1324
BstXI CCANNNNNNTGG 1 cut(s) 931
BstYI RGATCY 2 cut(s) 1279, 1324
Bsu15I ATCGAT 2 cut(s) 156, 1826
BsuI GTATCC 1 cut(s) 906
BsuRI GGCC 5 cut(s) 64, 336, 1336, 1431, 1754
BsuTUI ATCGAT 2 cut(s) 156, 1826
BtgZI GCGATG 1 cut(s) 1508
BtsCI GGATG 2 cut(s) 733, 1360
BtsIMutI CAGTG 3 cut(s) 125, 1005, 1748
BveI ACCTGC 1 cut(s) 1628
Cac8I GCNNGC 4 cut(s) 498, 1060, 1338, 1593
CfoI GCGC 1 cut(s) 667
Cfr13I GGNCC 2 cut(s) 654, 1430
ClaI ATCGAT 2 cut(s) 156, 1826
Csp6I GTAC 3 cut(s) 612, 1244, 1611
CviQI GTAC 3 cut(s) 612, 1244, 1611
DdeI CTNAG 6 cut(s) 128, 527, 542, 734, 1103, 1676
DpnI GATC 7 cut(s) 41, 159, 647, 674, 1014, 1281, 1326
DpnII GATC 7 cut(s) 39, 157, 645, 672, 1012, 1279, 1324
DraI TTTAAA 1 cut(s) 1171
EaeI YGGCCR 1 cut(s) 1752
Eam1104I CTCTTC 3 cut(s) 105, 833, 1468
EarI CTCTTC 3 cut(s) 105, 833, 1468
EciI GGCGGA 1 cut(s) 280
Eco147I AGGCCT 1 cut(s) 1336
Eco24I GRGCYC 1 cut(s) 325
Eco47I GGWCC 1 cut(s) 654
Eco47III AGCGCT 1 cut(s) 666
Eco57I CTGAAG 1 cut(s) 804
Eco88I CYCGRG 2 cut(s) 89, 147
EcoRII CCWGG 1 cut(s) 1015
EcoT22I ATGCAT 1 cut(s) 346
EcoT38I GRGCYC 1 cut(s) 325
Esp3I CGTCTC 1 cut(s) 901
FalI AAGNNNNNCTT 2 cut(s) 1626, 1658
FauI CCCGC 1 cut(s) 287
FbaI TGATCA 1 cut(s) 672
FblI GTMKAC 1 cut(s) 797
Fnu4HI GCNGC 8 cut(s) 115, 118, 218, 468, 575, 1548, 1653, 1672
FokI GGATG 2 cut(s) 740, 1367
FriOI GRGCYC 1 cut(s) 325
Fsp4HI GCNGC 8 cut(s) 115, 118, 218, 468, 575, 1548, 1653, 1672
FspBI CTAG 4 cut(s) 617, 848, 1659, 1820
GlaI GCGC 1 cut(s) 666
GluI GCNGC 8 cut(s) 115, 118, 218, 468, 575, 1548, 1653, 1672
GsaI CCCAGC 1 cut(s) 217
HaeII RGCGCY 1 cut(s) 668
HaeIII GGCC 5 cut(s) 64, 336, 1336, 1431, 1754
HhaI GCGC 1 cut(s) 667
Hin6I GCGC 1 cut(s) 665
HinP1I GCGC 1 cut(s) 665
HincII GTYRAC 1 cut(s) 1005
HindII GTYRAC 1 cut(s) 1005
HindIII AAGCTT 2 cut(s) 1538, 1782
HphI GGTGA 4 cut(s) 95, 1172, 1237, 1779
Hpy166II GTNNAC 3 cut(s) 134, 798, 1005
Hpy188III TCNNGA 4 cut(s) 91, 699, 1250, 1529
Hpy8I GTNNAC 3 cut(s) 134, 798, 1005
Hpy99I CGWCG 1 cut(s) 146
HpyAV CCTTC 5 cut(s) 93, 235, 499, 1222, 1511
HpyCH4III ACNGT 2 cut(s) 1400, 1863
HpyCH4IV ACGT 1 cut(s) 1191
HpyF10VI GCNNNNNNNGC 5 cut(s) 114, 299, 473, 730, 1490
HpyF3I CTNAG 6 cut(s) 128, 527, 542, 734, 1103, 1676
HpySE526I ACGT 1 cut(s) 1191
HspAI GCGC 1 cut(s) 665
Ksp22I TGATCA 1 cut(s) 672
Kzo9I GATC 7 cut(s) 39, 157, 645, 672, 1012, 1279, 1324
LguI GCTCTTC 1 cut(s) 105
LmnI GCTCC 3 cut(s) 362, 493, 862
Lsp1109I GCAGC 4 cut(s) 101, 229, 454, 1534
LweI GCATC 7 cut(s) 289, 331, 353, 1480, 1578, 1723, 1832
MaeI CTAG 4 cut(s) 617, 848, 1659, 1820
MaeII ACGT 1 cut(s) 1191
MaeIII GTNAC 1 cut(s) 1662
MalI GATC 7 cut(s) 41, 159, 647, 674, 1014, 1281, 1326
MboI GATC 7 cut(s) 39, 157, 645, 672, 1012, 1279, 1324
MflI RGATCY 2 cut(s) 1279, 1324
MhlI GDGCHC 2 cut(s) 325, 548
MlsI TGGCCA 1 cut(s) 1754
MluCI AATT 9 cut(s) 284, 593, 1087, 1127, 1294, 1384, 1407, 1854, 1875
MluNI TGGCCA 1 cut(s) 1754
MlyI GAGTC 6 cut(s) 28, 61, 116, 139, 159, 517
MmeI TCCRAC 2 cut(s) 75, 1030
Mox20I TGGCCA 1 cut(s) 1754
Mph1103I ATGCAT 1 cut(s) 346
MroXI GAANNNNTTC 1 cut(s) 789
MscI TGGCCA 1 cut(s) 1754
MseI TTAA 4 cut(s) 1170, 1271, 1406, 1767
MslI CAYNNNNRTG 1 cut(s) 1207
Msp20I TGGCCA 1 cut(s) 1754
MspA1I CMGCKG 1 cut(s) 551
MspR9I CCNGG 1 cut(s) 1017
MvaI CCWGG 1 cut(s) 1017
MvnI CGCG 1 cut(s) 120
MwoI GCNNNNNNNGC 5 cut(s) 114, 299, 473, 730, 1490
NdeII GATC 7 cut(s) 39, 157, 645, 672, 1012, 1279, 1324
NlaIV GGNNCC 3 cut(s) 80, 655, 858
NmeAIII GCCGAG 3 cut(s) 56, 90, 171
NsiI ATGCAT 1 cut(s) 346
NspI RCATGY 3 cut(s) 500, 1314, 1468
PaeI GCATGC 1 cut(s) 500
PaeR7I CTCGAG 1 cut(s) 89
PceI AGGCCT 1 cut(s) 1336
PciI ACATGT 1 cut(s) 1464
PciSI GCTCTTC 1 cut(s) 105
PcsI WCGNNNNNNNCGW 2 cut(s) 28, 117
PdmI GAANNNNTTC 1 cut(s) 789
PfeI GAWTC 4 cut(s) 330, 1099, 1700, 1744
PflMI CCANNNNNTGG 1 cut(s) 1468
PkrI GCNGC 8 cut(s) 116, 119, 219, 469, 576, 1549, 1654, 1673
PleI GAGTC 6 cut(s) 27, 61, 116, 138, 158, 517
PpsI GAGTC 6 cut(s) 27, 61, 116, 138, 158, 517
PscI ACATGT 1 cut(s) 1464
PsiI TTATAA 1 cut(s) 1293
Psp6I CCWGG 1 cut(s) 1015
PspFI CCCAGC 1 cut(s) 213
PspGI CCWGG 1 cut(s) 1015
PspN4I GGNNCC 3 cut(s) 80, 655, 858
PspPI GGNCC 2 cut(s) 654, 1430
PsuI RGATCY 2 cut(s) 1279, 1324
RsaI GTAC 3 cut(s) 613, 1245, 1612
RsaNI GTAC 3 cut(s) 612, 1244, 1611
RseI CAYNNNNRTG 1 cut(s) 1207
SapI GCTCTTC 1 cut(s) 105
SaqAI TTAA 4 cut(s) 1170, 1271, 1406, 1767
SatI GCNGC 8 cut(s) 115, 118, 218, 468, 575, 1548, 1653, 1672
Sau3AI GATC 7 cut(s) 39, 157, 645, 672, 1012, 1279, 1324
Sau96I GGNCC 2 cut(s) 654, 1430
SchI GAGTC 6 cut(s) 28, 61, 116, 139, 159, 517
ScrFI CCNGG 1 cut(s) 1017
SduI GDGCHC 2 cut(s) 325, 548
SfaNI GCATC 7 cut(s) 289, 331, 353, 1480, 1578, 1723, 1832
Sfr274I CTCGAG 1 cut(s) 89
SinI GGWCC 1 cut(s) 654
SlaI CTCGAG 1 cut(s) 89
SmiMI CAYNNNNRTG 1 cut(s) 1207
SmlI CTYRAG 3 cut(s) 89, 260, 308
SmoI CTYRAG 3 cut(s) 89, 260, 308
SphI GCATGC 1 cut(s) 500
Sse9I AATT 9 cut(s) 284, 593, 1087, 1127, 1294, 1384, 1407, 1854, 1875
SseBI AGGCCT 1 cut(s) 1336
SsiI CCGC 9 cut(s) 45, 106, 118, 280, 291, 549, 574, 1653, 1672
SspMI CTAG 4 cut(s) 617, 848, 1659, 1820
StuI AGGCCT 1 cut(s) 1336
StyD4I CCNGG 1 cut(s) 1015
TaaI ACNGT 2 cut(s) 1400, 1863
TaiI ACGT 1 cut(s) 1194
TaqI TCGA 8 cut(s) 22, 90, 156, 339, 644, 698, 966, 1826
TaqII GACCGA 2 cut(s) 337, 783
TasI AATT 9 cut(s) 284, 593, 1087, 1127, 1294, 1384, 1407, 1854, 1875
TauI GCSGC 4 cut(s) 120, 577, 1655, 1674
TfiI GAWTC 4 cut(s) 330, 1099, 1700, 1744
Tru1I TTAA 4 cut(s) 1170, 1271, 1406, 1767
Tru9I TTAA 4 cut(s) 1170, 1271, 1406, 1767
TscAI CASTG 3 cut(s) 132, 1005, 1755
TseI GCWGC 4 cut(s) 114, 217, 467, 1547
TspDTI ATGAA 8 cut(s) 531, 751, 874, 933, 1033, 1140, 1271, 1400
TspGWI ACGGA 3 cut(s) 349, 646, 925
TspRI CASTG 3 cut(s) 132, 1005, 1755
Van91I CCANNNNNTGG 1 cut(s) 1468
VpaK11BI GGWCC 1 cut(s) 654
XapI RAATTY 1 cut(s) 1384
XceI RCATGY 3 cut(s) 500, 1314, 1468
XhoI CTCGAG 1 cut(s) 89
XmiI GTMKAC 1 cut(s) 797
XmnI GAANNNNTTC 1 cut(s) 789
XspI CTAG 4 cut(s) 617, 848, 1659, 1820
Zsp2I ATGCAT 1 cut(s) 346
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.