Domain of unknown function (DUF3444)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 208 |
| AciI | CCGC | 1 cut(s) | 830 |
| AclWI | GGATC | 2 cut(s) | 1421, 1994 |
| AcsI | RAATTY | 4 cut(s) | 448, 1775, 1899, 1935 |
| AcuI | CTGAAG | 1 cut(s) | 1839 |
| AfaI | GTAC | 2 cut(s) | 1082, 1535 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1694 |
| AjnI | CCWGG | 3 cut(s) | 514, 1375, 1529 |
| Alw21I | GWGCWC | 2 cut(s) | 400, 681 |
| Alw26I | GTCTC | 1 cut(s) | 754 |
| Alw44I | GTGCAC | 1 cut(s) | 677 |
| AlwI | GGATC | 2 cut(s) | 1421, 1994 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 317, 839 |
| Ama87I | CYCGRG | 4 cut(s) | 115, 269, 500, 1567 |
| AoxI | GGCC | 2 cut(s) | 1379, 1707 |
| ApaI | GGGCCC | 1 cut(s) | 1711 |
| ApaLI | GTGCAC | 1 cut(s) | 677 |
| ApeKI | GCWGC | 6 cut(s) | 317, 476, 806, 839, 1178, 1238 |
| ApoI | RAATTY | 4 cut(s) | 448, 1775, 1899, 1935 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 806, 838, 1353, 1385 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 257, 1939 |
| AspA2I | CCTAGG | 1 cut(s) | 1688 |
| AspS9I | GGNCC | 5 cut(s) | 956, 1379, 1707, 1708, 1986 |
| AsuC2I | CCSGG | 4 cut(s) | 116, 117, 1568, 1569 |
| AsuHPI | GGTGA | 3 cut(s) | 1212, 1709, 1895 |
| AvaI | CYCGRG | 4 cut(s) | 115, 269, 500, 1567 |
| AvaII | GGWCC | 2 cut(s) | 956, 1986 |
| AvrII | CCTAGG | 1 cut(s) | 1688 |
| BaeGI | GKGCMC | 3 cut(s) | 515, 681, 1711 |
| BanII | GRGCYC | 4 cut(s) | 400, 1142, 1501, 1711 |
| BbsI | GAAGAC | 1 cut(s) | 646 |
| Bbv12I | GWGCWC | 2 cut(s) | 400, 681 |
| BbvI | GCAGC | 6 cut(s) | 304, 463, 818, 826, 1190, 1225 |
| BccI | CCATC | 6 cut(s) | 82, 179, 845, 1241, 1514, 1728 |
| BciT130I | CCWGG | 3 cut(s) | 516, 1377, 1531 |
| BciVI | GTATCC | 1 cut(s) | 597 |
| BcnI | CCSGG | 4 cut(s) | 116, 117, 1568, 1569 |
| BcoDI | GTCTC | 1 cut(s) | 754 |
| BfaI | CTAG | 5 cut(s) | 182, 1031, 1155, 1289, 1689 |
| BfmI | CTRYAG | 1 cut(s) | 215 |
| BfuAI | ACCTGC | 1 cut(s) | 208 |
| BfuI | GTATCC | 1 cut(s) | 597 |
| BisI | GCNGC | 7 cut(s) | 318, 477, 807, 831, 840, 1179, 1239 |
| BlnI | CCTAGG | 1 cut(s) | 1688 |
| BlsI | GCNGC | 7 cut(s) | 319, 478, 808, 832, 841, 1180, 1240 |
| Bme1390I | CCNGG | 7 cut(s) | 116, 117, 516, 1377, 1531, 1568, 1569 |
| Bme18I | GGWCC | 2 cut(s) | 956, 1986 |
| BmeT110I | CYCGRG | 4 cut(s) | 115, 269, 500, 1567 |
| BmgT120I | GGNCC | 5 cut(s) | 956, 1379, 1707, 1708, 1986 |
| BmiI | GGNNCC | 5 cut(s) | 698, 1329, 1422, 1709, 1987 |
| BmrFI | CCNGG | 7 cut(s) | 116, 117, 516, 1377, 1531, 1568, 1569 |
| BmrI | ACTGGG | 3 cut(s) | 1332, 1732, 1965 |
| BmsI | GCATC | 5 cut(s) | 45, 1225, 1406, 1588, 1903 |
| BmuI | ACTGGG | 3 cut(s) | 1332, 1732, 1965 |
| BpiI | GAAGAC | 1 cut(s) | 646 |
| BpuEI | CTTGAG | 1 cut(s) | 143 |
| BpuMI | CCSGG | 4 cut(s) | 116, 117, 1568, 1569 |
| Bsa29I | ATCGAT | 1 cut(s) | 613 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1602 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1694 |
| Bse3DI | GCAATG | 3 cut(s) | 39, 648, 1645 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1602 |
| BseBI | CCWGG | 3 cut(s) | 516, 1377, 1531 |
| BseCI | ATCGAT | 1 cut(s) | 613 |
| BseGI | GGATG | 4 cut(s) | 1252, 1397, 1603, 1739 |
| BseJI | GATNNNNATC | 1 cut(s) | 1602 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1694 |
| BseMI | GCAATG | 3 cut(s) | 39, 648, 1645 |
| BseMII | CTCAG | 4 cut(s) | 395, 706, 1034, 1734 |
| BseRI | GAGGAG | 1 cut(s) | 32 |
| BseSI | GKGCMC | 3 cut(s) | 515, 681, 1711 |
| BseXI | GCAGC | 6 cut(s) | 304, 463, 818, 826, 1190, 1225 |
| BseYI | CCCAGC | 1 cut(s) | 1304 |
| BsgI | GTGCAG | 1 cut(s) | 330 |
| Bsh1285I | CGRYCG | 1 cut(s) | 361 |
| BshFI | GGCC | 2 cut(s) | 1381, 1709 |
| BshVI | ATCGAT | 1 cut(s) | 613 |
| BsiEI | CGRYCG | 1 cut(s) | 361 |
| BsiHKAI | GWGCWC | 2 cut(s) | 400, 681 |
| BsiHKCI | CYCGRG | 4 cut(s) | 115, 269, 500, 1567 |
| BsiSI | CCGG | 3 cut(s) | 116, 798, 1568 |
| BslFI | GGGAC | 1 cut(s) | 552 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1694 |
| BsmAI | GTCTC | 1 cut(s) | 754 |
| BsmFI | GGGAC | 1 cut(s) | 552 |
| BsmI | GAATGC | 1 cut(s) | 1180 |
| BsnI | GGCC | 2 cut(s) | 1381, 1709 |
| BsoBI | CYCGRG | 4 cut(s) | 115, 269, 500, 1567 |
| Bsp120I | GGGCCC | 1 cut(s) | 1707 |
| Bsp1286I | GDGCHC | 6 cut(s) | 400, 515, 681, 1142, 1501, 1711 |
| Bsp143I | GATC | 4 cut(s) | 330, 1426, 1618, 1999 |
| BspACI | CCGC | 1 cut(s) | 830 |
| BspANI | GGCC | 2 cut(s) | 1381, 1709 |
| BspCNI | CTCAG | 4 cut(s) | 396, 705, 1035, 1735 |
| BspDI | ATCGAT | 1 cut(s) | 613 |
| BspHI | TCATGA | 1 cut(s) | 235 |
| BspLI | GGNNCC | 5 cut(s) | 698, 1329, 1422, 1709, 1987 |
| BspMAI | CTGCAG | 1 cut(s) | 219 |
| BspMI | ACCTGC | 1 cut(s) | 208 |
| BspPI | GGATC | 2 cut(s) | 1421, 1994 |
| BspQI | GCTCTTC | 2 cut(s) | 405, 1130 |
| BsrDI | GCAATG | 3 cut(s) | 39, 648, 1645 |
| BssMI | GATC | 4 cut(s) | 330, 1426, 1618, 1999 |
| BssT1I | CCWWGG | 2 cut(s) | 945, 1688 |
| Bst2UI | CCWGG | 3 cut(s) | 516, 1377, 1531 |
| Bst4CI | ACNGT | 4 cut(s) | 470, 510, 583, 1146 |
| Bst6I | CTCTTC | 3 cut(s) | 116, 405, 1130 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 317, 839 |
| BstC8I | GCNNGC | 2 cut(s) | 543, 1526 |
| BstDEI | CTNAG | 5 cut(s) | 404, 682, 692, 1043, 1743 |
| BstEII | GGTNACC | 1 cut(s) | 1218 |
| BstF5I | GGATG | 4 cut(s) | 1252, 1397, 1603, 1739 |
| BstKTI | GATC | 4 cut(s) | 333, 1429, 1621, 2002 |
| BstMAI | GTCTC | 1 cut(s) | 754 |
| BstMBI | GATC | 4 cut(s) | 330, 1426, 1618, 1999 |
| BstMCI | CGRYCG | 1 cut(s) | 361 |
| BstNI | CCWGG | 3 cut(s) | 516, 1377, 1531 |
| BstNSI | RCATGY | 2 cut(s) | 1051, 1528 |
| BstPI | GGTNACC | 1 cut(s) | 1218 |
| BstSCI | CCNGG | 7 cut(s) | 114, 115, 514, 1375, 1529, 1566, 1567 |
| BstSFI | CTRYAG | 1 cut(s) | 215 |
| BstSLI | GKGCMC | 3 cut(s) | 515, 681, 1711 |
| BstV1I | GCAGC | 6 cut(s) | 304, 463, 818, 826, 1190, 1225 |
| BstV2I | GAAGAC | 1 cut(s) | 646 |
| Bsu15I | ATCGAT | 1 cut(s) | 613 |
| BsuI | GTATCC | 1 cut(s) | 597 |
| BsuRI | GGCC | 2 cut(s) | 1381, 1709 |
| BsuTUI | ATCGAT | 1 cut(s) | 613 |
| BtsCI | GGATG | 4 cut(s) | 1252, 1397, 1603, 1739 |
| BtsI | GCAGTG | 2 cut(s) | 196, 354 |
| BtsIMutI | CAGTG | 8 cut(s) | 196, 354, 466, 515, 588, 942, 1142, 1156 |
| BveI | ACCTGC | 1 cut(s) | 208 |
| Cac8I | GCNNGC | 2 cut(s) | 543, 1526 |
| CaiI | CAGNNNCTG | 2 cut(s) | 317, 839 |
| CciI | TCATGA | 1 cut(s) | 235 |
| Cfr13I | GGNCC | 5 cut(s) | 956, 1379, 1707, 1708, 1986 |
| Cfr9I | CCCGGG | 2 cut(s) | 115, 1567 |
| ClaI | ATCGAT | 1 cut(s) | 613 |
| CseI | GACGC | 1 cut(s) | 482 |
| Csp6I | GTAC | 2 cut(s) | 1081, 1534 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2005, 2040 |
| CviQI | GTAC | 2 cut(s) | 1081, 1534 |
| DdeI | CTNAG | 5 cut(s) | 404, 682, 692, 1043, 1743 |
| DpnI | GATC | 4 cut(s) | 332, 1428, 1620, 2001 |
| DpnII | GATC | 4 cut(s) | 330, 1426, 1618, 1999 |
| DraI | TTTAAA | 1 cut(s) | 1480 |
| Eam1104I | CTCTTC | 3 cut(s) | 116, 405, 1130 |
| EarI | CTCTTC | 3 cut(s) | 116, 405, 1130 |
| Ecl136II | GAGCTC | 1 cut(s) | 398 |
| Eco130I | CCWWGG | 2 cut(s) | 945, 1688 |
| Eco24I | GRGCYC | 4 cut(s) | 400, 1142, 1501, 1711 |
| Eco32I | GATATC | 1 cut(s) | 1888 |
| Eco47I | GGWCC | 2 cut(s) | 956, 1986 |
| Eco53kI | GAGCTC | 1 cut(s) | 398 |
| Eco57I | CTGAAG | 1 cut(s) | 1839 |
| Eco88I | CYCGRG | 4 cut(s) | 115, 269, 500, 1567 |
| Eco91I | GGTNACC | 1 cut(s) | 1218 |
| EcoICRI | GAGCTC | 1 cut(s) | 398 |
| EcoO109I | RGGNCCY | 3 cut(s) | 956, 1708, 1986 |
| EcoO65I | GGTNACC | 1 cut(s) | 1218 |
| EcoRI | GAATTC | 2 cut(s) | 1899, 1935 |
| EcoRII | CCWGG | 3 cut(s) | 514, 1375, 1529 |
| EcoRV | GATATC | 1 cut(s) | 1888 |
| EcoT14I | CCWWGG | 2 cut(s) | 945, 1688 |
| EcoT38I | GRGCYC | 4 cut(s) | 400, 1142, 1501, 1711 |
| ErhI | CCWWGG | 2 cut(s) | 945, 1688 |
| FaqI | GGGAC | 1 cut(s) | 552 |
| Fnu4HI | GCNGC | 7 cut(s) | 318, 477, 807, 831, 840, 1179, 1239 |
| FokI | GGATG | 4 cut(s) | 1259, 1384, 1610, 1746 |
| FriOI | GRGCYC | 4 cut(s) | 400, 1142, 1501, 1711 |
| Fsp4HI | GCNGC | 7 cut(s) | 318, 477, 807, 831, 840, 1179, 1239 |
| FspBI | CTAG | 5 cut(s) | 182, 1031, 1155, 1289, 1689 |
| GluI | GCNGC | 7 cut(s) | 318, 477, 807, 831, 840, 1179, 1239 |
| GsaI | CCCAGC | 1 cut(s) | 1308 |
| HaeIII | GGCC | 2 cut(s) | 1381, 1709 |
| HapII | CCGG | 3 cut(s) | 116, 798, 1568 |
| HgaI | GACGC | 1 cut(s) | 482 |
| HindIII | AAGCTT | 1 cut(s) | 1279 |
| HinfI | GANTC | 7 cut(s) | 211, 503, 602, 733, 950, 997, 1039 |
| HpaII | CCGG | 3 cut(s) | 116, 798, 1568 |
| HphI | GGTGA | 3 cut(s) | 1212, 1709, 1895 |
| Hpy166II | GTNNAC | 2 cut(s) | 679, 1114 |
| Hpy188I | TCNGA | 9 cut(s) | 263, 405, 492, 658, 972, 1044, 1744, 1795, 1980 |
| Hpy8I | GTNNAC | 2 cut(s) | 679, 1114 |
| HpyAV | CCTTC | 7 cut(s) | 91, 580, 898, 969, 1255, 1687, 1950 |
| HpyCH4III | ACNGT | 4 cut(s) | 470, 510, 583, 1146 |
| HpyCH4IV | ACGT | 1 cut(s) | 622 |
| HpyF3I | CTNAG | 5 cut(s) | 404, 682, 692, 1043, 1743 |
| HpySE526I | ACGT | 1 cut(s) | 622 |
| Kzo9I | GATC | 4 cut(s) | 330, 1426, 1618, 1999 |
| LguI | GCTCTTC | 2 cut(s) | 405, 1130 |
| LmnI | GCTCC | 2 cut(s) | 77, 854 |
| Lsp1109I | GCAGC | 6 cut(s) | 304, 463, 818, 826, 1190, 1225 |
| LweI | GCATC | 5 cut(s) | 45, 1225, 1406, 1588, 1903 |
| MaeI | CTAG | 5 cut(s) | 182, 1031, 1155, 1289, 1689 |
| MaeII | ACGT | 1 cut(s) | 622 |
| MaeIII | GTNAC | 7 cut(s) | 276, 470, 504, 618, 781, 1218, 1369 |
| MalI | GATC | 4 cut(s) | 332, 1428, 1620, 2001 |
| MboI | GATC | 4 cut(s) | 330, 1426, 1618, 1999 |
| MboII | GAAGA | 8 cut(s) | 97, 103, 392, 651, 1147, 1270, 1304, 1469 |
| MfeI | CAATTG | 1 cut(s) | 992 |
| MhlI | GDGCHC | 6 cut(s) | 400, 515, 681, 1142, 1501, 1711 |
| MluCI | AATT | 8 cut(s) | 137, 257, 448, 992, 1433, 1775, 1899, 1935 |
| MlyI | GAGTC | 3 cut(s) | 512, 596, 959 |
| MmeI | TCCRAC | 2 cut(s) | 984, 1773 |
| MroXI | GAANNNNTTC | 2 cut(s) | 257, 1939 |
| MseI | TTAA | 7 cut(s) | 282, 324, 441, 1206, 1452, 1479, 1575 |
| MspA1I | CMGCKG | 2 cut(s) | 170, 1181 |
| MspI | CCGG | 3 cut(s) | 116, 798, 1568 |
| MspR9I | CCNGG | 7 cut(s) | 116, 117, 516, 1377, 1531, 1568, 1569 |
| MunI | CAATTG | 1 cut(s) | 992 |
| Mva1269I | GAATGC | 1 cut(s) | 1180 |
| MvaI | CCWGG | 3 cut(s) | 516, 1377, 1531 |
| NciI | CCSGG | 4 cut(s) | 116, 117, 1568, 1569 |
| NdeII | GATC | 4 cut(s) | 330, 1426, 1618, 1999 |
| NlaIV | GGNNCC | 5 cut(s) | 698, 1329, 1422, 1709, 1987 |
| NmeAIII | GCCGAG | 1 cut(s) | 584 |
| NmuCI | GTSAC | 4 cut(s) | 470, 504, 1218, 1369 |
| NspI | RCATGY | 2 cut(s) | 1051, 1528 |
| PaeI | GCATGC | 1 cut(s) | 1528 |
| PagI | TCATGA | 1 cut(s) | 235 |
| PciSI | GCTCTTC | 2 cut(s) | 405, 1130 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 619 |
| PctI | GAATGC | 1 cut(s) | 1180 |
| PdmI | GAANNNNTTC | 2 cut(s) | 257, 1939 |
| PfeI | GAWTC | 4 cut(s) | 211, 733, 997, 1039 |
| PkrI | GCNGC | 7 cut(s) | 319, 478, 808, 832, 841, 1180, 1240 |
| PleI | GAGTC | 3 cut(s) | 511, 596, 958 |
| PpsI | GAGTC | 3 cut(s) | 511, 596, 958 |
| PpuMI | RGGWCCY | 2 cut(s) | 956, 1986 |
| Psp124BI | GAGCTC | 1 cut(s) | 400 |
| Psp5II | RGGWCCY | 2 cut(s) | 956, 1986 |
| Psp6I | CCWGG | 3 cut(s) | 514, 1375, 1529 |
| PspEI | GGTNACC | 1 cut(s) | 1218 |
| PspFI | CCCAGC | 1 cut(s) | 1304 |
| PspGI | CCWGG | 3 cut(s) | 514, 1375, 1529 |
| PspN4I | GGNNCC | 5 cut(s) | 698, 1329, 1422, 1709, 1987 |
| PspOMI | GGGCCC | 1 cut(s) | 1707 |
| PspPI | GGNCC | 5 cut(s) | 956, 1379, 1707, 1708, 1986 |
| PspPPI | RGGWCCY | 2 cut(s) | 956, 1986 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 141, 173, 1064, 1096 |
| PstI | CTGCAG | 1 cut(s) | 219 |
| PstNI | CAGNNNCTG | 2 cut(s) | 317, 839 |
| PvuII | CAGCTG | 2 cut(s) | 170, 1181 |
| RsaI | GTAC | 2 cut(s) | 1082, 1535 |
| RsaNI | GTAC | 2 cut(s) | 1081, 1534 |
| SacI | GAGCTC | 1 cut(s) | 400 |
| SapI | GCTCTTC | 2 cut(s) | 405, 1130 |
| SaqAI | TTAA | 7 cut(s) | 282, 324, 441, 1206, 1452, 1479, 1575 |
| SatI | GCNGC | 7 cut(s) | 318, 477, 807, 831, 840, 1179, 1239 |
| Sau3AI | GATC | 4 cut(s) | 330, 1426, 1618, 1999 |
| Sau96I | GGNCC | 5 cut(s) | 956, 1379, 1707, 1708, 1986 |
| SchI | GAGTC | 3 cut(s) | 512, 596, 959 |
| ScrFI | CCNGG | 7 cut(s) | 116, 117, 516, 1377, 1531, 1568, 1569 |
| SduI | GDGCHC | 6 cut(s) | 400, 515, 681, 1142, 1501, 1711 |
| SfaNI | GCATC | 5 cut(s) | 45, 1225, 1406, 1588, 1903 |
| SfcI | CTRYAG | 1 cut(s) | 215 |
| SinI | GGWCC | 2 cut(s) | 956, 1986 |
| SmaI | CCCGGG | 2 cut(s) | 117, 1569 |
| SmlI | CTYRAG | 1 cut(s) | 122 |
| SmoI | CTYRAG | 1 cut(s) | 122 |
| SphI | GCATGC | 1 cut(s) | 1528 |
| Sse9I | AATT | 8 cut(s) | 137, 257, 448, 992, 1433, 1775, 1899, 1935 |
| SsiI | CCGC | 1 cut(s) | 830 |
| SspI | AATATT | 3 cut(s) | 130, 496, 1210 |
| SspMI | CTAG | 5 cut(s) | 182, 1031, 1155, 1289, 1689 |
| SstI | GAGCTC | 1 cut(s) | 400 |
| StyD4I | CCNGG | 7 cut(s) | 114, 115, 514, 1375, 1529, 1566, 1567 |
| StyI | CCWWGG | 2 cut(s) | 945, 1688 |
| TaaI | ACNGT | 4 cut(s) | 470, 510, 583, 1146 |
| TaiI | ACGT | 1 cut(s) | 625 |
| TaqI | TCGA | 5 cut(s) | 613, 637, 962, 1897, 1933 |
| TaqII | GACCGA | 1 cut(s) | 375 |
| TasI | AATT | 8 cut(s) | 137, 257, 448, 992, 1433, 1775, 1899, 1935 |
| TauI | GCSGC | 1 cut(s) | 833 |
| TfiI | GAWTC | 4 cut(s) | 211, 733, 997, 1039 |
| Tru1I | TTAA | 7 cut(s) | 282, 324, 441, 1206, 1452, 1479, 1575 |
| Tru9I | TTAA | 7 cut(s) | 282, 324, 441, 1206, 1452, 1479, 1575 |
| TscAI | CASTG | 8 cut(s) | 196, 354, 473, 515, 588, 942, 1149, 1156 |
| TseFI | GTSAC | 4 cut(s) | 470, 504, 1218, 1369 |
| TseI | GCWGC | 6 cut(s) | 317, 476, 806, 839, 1178, 1238 |
| Tsp45I | GTSAC | 4 cut(s) | 470, 504, 1218, 1369 |
| TspMI | CCCGGG | 2 cut(s) | 115, 1567 |
| TspRI | CASTG | 8 cut(s) | 196, 354, 473, 515, 588, 942, 1149, 1156 |
| VneI | GTGCAC | 1 cut(s) | 677 |
| VpaK11BI | GGWCC | 2 cut(s) | 956, 1986 |
| XapI | RAATTY | 4 cut(s) | 448, 1775, 1899, 1935 |
| XbaI | TCTAGA | 1 cut(s) | 1288 |
| XceI | RCATGY | 2 cut(s) | 1051, 1528 |
| XmaI | CCCGGG | 2 cut(s) | 115, 1567 |
| XmaJI | CCTAGG | 1 cut(s) | 1688 |
| XmnI | GAANNNNTTC | 2 cut(s) | 257, 1939 |
| XspI | CTAG | 5 cut(s) | 182, 1031, 1155, 1289, 1689 |