Domain of unknown function (DUF3444)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 310 |
| AciI | CCGC | 1 cut(s) | 413 |
| AclWI | GGATC | 2 cut(s) | 1502, 2153 |
| AcsI | RAATTY | 5 cut(s) | 20, 550, 1934, 2058, 2094 |
| AcuI | CTGAAG | 2 cut(s) | 1785, 1998 |
| AdeI | CACNNNGTG | 1 cut(s) | 614 |
| AfaI | GTAC | 3 cut(s) | 1616, 1762, 1874 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 95, 1853 |
| AjnI | CCWGG | 2 cut(s) | 1456, 1610 |
| Alw21I | GWGCWC | 2 cut(s) | 502, 783 |
| Alw44I | GTGCAC | 1 cut(s) | 779 |
| AlwI | GGATC | 2 cut(s) | 1502, 2153 |
| Ama87I | CYCGRG | 4 cut(s) | 217, 371, 602, 1648 |
| AoxI | GGCC | 2 cut(s) | 1460, 1866 |
| ApaI | GGGCCC | 1 cut(s) | 1870 |
| ApaLI | GTGCAC | 1 cut(s) | 779 |
| ApeKI | GCWGC | 5 cut(s) | 419, 578, 908, 941, 1319 |
| ApoI | RAATTY | 5 cut(s) | 20, 550, 1934, 2058, 2094 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 908, 940, 1434, 1466 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 359, 2098 |
| AspA2I | CCTAGG | 2 cut(s) | 1696, 1847 |
| AspS9I | GGNCC | 4 cut(s) | 1460, 1866, 1867, 2145 |
| AsuC2I | CCSGG | 5 cut(s) | 34, 218, 219, 1649, 1650 |
| AsuHPI | GGTGA | 5 cut(s) | 1115, 1293, 1712, 1868, 2054 |
| AsuNHI | GCTAGC | 1 cut(s) | 617 |
| AvaI | CYCGRG | 4 cut(s) | 217, 371, 602, 1648 |
| AvaII | GGWCC | 1 cut(s) | 2145 |
| AvrII | CCTAGG | 2 cut(s) | 1696, 1847 |
| BaeGI | GKGCMC | 2 cut(s) | 783, 1870 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 96, 129 |
| BanII | GRGCYC | 4 cut(s) | 502, 1223, 1582, 1870 |
| BbsI | GAAGAC | 1 cut(s) | 748 |
| Bbv12I | GWGCWC | 2 cut(s) | 502, 783 |
| BbvI | GCAGC | 5 cut(s) | 406, 565, 920, 928, 1306 |
| BccI | CCATC | 6 cut(s) | 89, 281, 947, 1322, 1595, 1887 |
| BceAI | ACGGC | 1 cut(s) | 207 |
| BciT130I | CCWGG | 2 cut(s) | 1458, 1612 |
| BcnI | CCSGG | 5 cut(s) | 34, 218, 219, 1649, 1650 |
| BfaI | CTAG | 7 cut(s) | 284, 618, 785, 1056, 1370, 1697, 1848 |
| BfmI | CTRYAG | 2 cut(s) | 90, 317 |
| BfuAI | ACCTGC | 1 cut(s) | 310 |
| BisI | GCNGC | 5 cut(s) | 420, 579, 909, 942, 1320 |
| BlnI | CCTAGG | 2 cut(s) | 1696, 1847 |
| BlsI | GCNGC | 5 cut(s) | 421, 580, 910, 943, 1321 |
| BmcAI | AGTACT | 1 cut(s) | 1762 |
| Bme1390I | CCNGG | 7 cut(s) | 34, 218, 219, 1458, 1612, 1649, 1650 |
| Bme18I | GGWCC | 1 cut(s) | 2145 |
| BmeT110I | CYCGRG | 4 cut(s) | 217, 371, 602, 1648 |
| BmgT120I | GGNCC | 4 cut(s) | 1460, 1866, 1867, 2145 |
| BmiI | GGNNCC | 5 cut(s) | 800, 1410, 1503, 1868, 2146 |
| BmrFI | CCNGG | 7 cut(s) | 34, 218, 219, 1458, 1612, 1649, 1650 |
| BmrI | ACTGGG | 3 cut(s) | 1413, 1891, 2124 |
| BmsI | GCATC | 6 cut(s) | 147, 565, 1306, 1487, 1669, 2098 |
| BmtI | GCTAGC | 1 cut(s) | 621 |
| BmuI | ACTGGG | 3 cut(s) | 1413, 1891, 2124 |
| BpiI | GAAGAC | 1 cut(s) | 748 |
| BpuEI | CTTGAG | 1 cut(s) | 245 |
| BpuMI | CCSGG | 5 cut(s) | 34, 218, 219, 1649, 1650 |
| Bsa29I | ATCGAT | 1 cut(s) | 715 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1683 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 95, 1853 |
| Bse3DI | GCAATG | 2 cut(s) | 141, 1804 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1683 |
| BseBI | CCWGG | 2 cut(s) | 1458, 1612 |
| BseCI | ATCGAT | 1 cut(s) | 715 |
| BseGI | GGATG | 4 cut(s) | 1333, 1478, 1684, 1898 |
| BseJI | GATNNNNATC | 1 cut(s) | 1683 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 95, 1853 |
| BseMI | GCAATG | 2 cut(s) | 141, 1804 |
| BseMII | CTCAG | 4 cut(s) | 497, 808, 1059, 1893 |
| BseRI | GAGGAG | 1 cut(s) | 134 |
| BseSI | GKGCMC | 2 cut(s) | 783, 1870 |
| BseXI | GCAGC | 5 cut(s) | 406, 565, 920, 928, 1306 |
| BseYI | CCCAGC | 1 cut(s) | 1385 |
| BsgI | GTGCAG | 1 cut(s) | 643 |
| Bsh1285I | CGRYCG | 1 cut(s) | 463 |
| BshFI | GGCC | 2 cut(s) | 1462, 1868 |
| BshVI | ATCGAT | 1 cut(s) | 715 |
| BsiEI | CGRYCG | 1 cut(s) | 463 |
| BsiHKAI | GWGCWC | 2 cut(s) | 502, 783 |
| BsiHKCI | CYCGRG | 4 cut(s) | 217, 371, 602, 1648 |
| BsiSI | CCGG | 4 cut(s) | 33, 218, 1418, 1649 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 95, 1853 |
| BsmI | GAATGC | 1 cut(s) | 1261 |
| BsnI | GGCC | 2 cut(s) | 1462, 1868 |
| BsoBI | CYCGRG | 4 cut(s) | 217, 371, 602, 1648 |
| Bsp120I | GGGCCC | 1 cut(s) | 1866 |
| Bsp1286I | GDGCHC | 5 cut(s) | 502, 783, 1223, 1582, 1870 |
| Bsp1407I | TGTACA | 1 cut(s) | 1872 |
| Bsp143I | GATC | 4 cut(s) | 432, 1507, 1777, 2158 |
| BspACI | CCGC | 1 cut(s) | 413 |
| BspANI | GGCC | 2 cut(s) | 1462, 1868 |
| BspCNI | CTCAG | 4 cut(s) | 498, 807, 1060, 1894 |
| BspDI | ATCGAT | 1 cut(s) | 715 |
| BspHI | TCATGA | 1 cut(s) | 337 |
| BspLI | GGNNCC | 5 cut(s) | 800, 1410, 1503, 1868, 2146 |
| BspMAI | CTGCAG | 1 cut(s) | 321 |
| BspMI | ACCTGC | 1 cut(s) | 310 |
| BspOI | GCTAGC | 1 cut(s) | 621 |
| BspPI | GGATC | 2 cut(s) | 1502, 2153 |
| BspQI | GCTCTTC | 2 cut(s) | 507, 1211 |
| BsrDI | GCAATG | 2 cut(s) | 141, 1804 |
| BsrGI | TGTACA | 1 cut(s) | 1872 |
| BssMI | GATC | 4 cut(s) | 432, 1507, 1777, 2158 |
| BssT1I | CCWWGG | 3 cut(s) | 1047, 1696, 1847 |
| Bst2UI | CCWGG | 2 cut(s) | 1458, 1612 |
| Bst4CI | ACNGT | 4 cut(s) | 572, 612, 685, 1227 |
| Bst6I | CTCTTC | 3 cut(s) | 218, 507, 1211 |
| BstAUI | TGTACA | 1 cut(s) | 1872 |
| BstC8I | GCNNGC | 2 cut(s) | 619, 1607 |
| BstDEI | CTNAG | 4 cut(s) | 506, 794, 1068, 1902 |
| BstEII | GGTNACC | 1 cut(s) | 1299 |
| BstF5I | GGATG | 4 cut(s) | 1333, 1478, 1684, 1898 |
| BstKTI | GATC | 4 cut(s) | 435, 1510, 1780, 2161 |
| BstMBI | GATC | 4 cut(s) | 432, 1507, 1777, 2158 |
| BstMCI | CGRYCG | 1 cut(s) | 463 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 131, 200, 419, 1319, 1815, 1912, 1991 |
| BstNI | CCWGG | 2 cut(s) | 1458, 1612 |
| BstNSI | RCATGY | 2 cut(s) | 1076, 1609 |
| BstPI | GGTNACC | 1 cut(s) | 1299 |
| BstSCI | CCNGG | 7 cut(s) | 32, 216, 217, 1456, 1610, 1647, 1648 |
| BstSFI | CTRYAG | 2 cut(s) | 90, 317 |
| BstSLI | GKGCMC | 2 cut(s) | 783, 1870 |
| BstV1I | GCAGC | 5 cut(s) | 406, 565, 920, 928, 1306 |
| BstV2I | GAAGAC | 1 cut(s) | 748 |
| Bsu15I | ATCGAT | 1 cut(s) | 715 |
| BsuRI | GGCC | 2 cut(s) | 1462, 1868 |
| BsuTUI | ATCGAT | 1 cut(s) | 715 |
| BtsCI | GGATG | 4 cut(s) | 1333, 1478, 1684, 1898 |
| BtsI | GCAGTG | 2 cut(s) | 298, 456 |
| BtsIMutI | CAGTG | 8 cut(s) | 298, 456, 568, 617, 690, 1044, 1223, 1237 |
| BveI | ACCTGC | 1 cut(s) | 310 |
| Cac8I | GCNNGC | 2 cut(s) | 619, 1607 |
| CciI | TCATGA | 1 cut(s) | 337 |
| Cfr13I | GGNCC | 4 cut(s) | 1460, 1866, 1867, 2145 |
| Cfr9I | CCCGGG | 2 cut(s) | 217, 1648 |
| ClaI | ATCGAT | 1 cut(s) | 715 |
| CseI | GACGC | 2 cut(s) | 100, 2042 |
| Csp6I | GTAC | 3 cut(s) | 1615, 1761, 1873 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2164, 2199 |
| CviAII | CATG | 7 cut(s) | 338, 487, 860, 989, 1073, 1575, 1606 |
| CviQI | GTAC | 3 cut(s) | 1615, 1761, 1873 |
| DdeI | CTNAG | 4 cut(s) | 506, 794, 1068, 1902 |
| DpnI | GATC | 4 cut(s) | 434, 1509, 1779, 2160 |
| DpnII | GATC | 4 cut(s) | 432, 1507, 1777, 2158 |
| DraI | TTTAAA | 1 cut(s) | 1561 |
| DraIII | CACNNNGTG | 1 cut(s) | 614 |
| Eam1104I | CTCTTC | 3 cut(s) | 218, 507, 1211 |
| EarI | CTCTTC | 3 cut(s) | 218, 507, 1211 |
| Ecl136II | GAGCTC | 1 cut(s) | 500 |
| Eco130I | CCWWGG | 3 cut(s) | 1047, 1696, 1847 |
| Eco24I | GRGCYC | 4 cut(s) | 502, 1223, 1582, 1870 |
| Eco32I | GATATC | 1 cut(s) | 2047 |
| Eco47I | GGWCC | 1 cut(s) | 2145 |
| Eco53kI | GAGCTC | 1 cut(s) | 500 |
| Eco57I | CTGAAG | 2 cut(s) | 1785, 1998 |
| Eco88I | CYCGRG | 4 cut(s) | 217, 371, 602, 1648 |
| Eco91I | GGTNACC | 1 cut(s) | 1299 |
| EcoICRI | GAGCTC | 1 cut(s) | 500 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1867, 2145 |
| EcoO65I | GGTNACC | 1 cut(s) | 1299 |
| EcoRI | GAATTC | 2 cut(s) | 2058, 2094 |
| EcoRII | CCWGG | 2 cut(s) | 1456, 1610 |
| EcoRV | GATATC | 1 cut(s) | 2047 |
| EcoT14I | CCWWGG | 3 cut(s) | 1047, 1696, 1847 |
| EcoT38I | GRGCYC | 4 cut(s) | 502, 1223, 1582, 1870 |
| ErhI | CCWWGG | 3 cut(s) | 1047, 1696, 1847 |
| FaeI | CATG | 7 cut(s) | 341, 490, 863, 992, 1076, 1578, 1609 |
| FatI | CATG | 7 cut(s) | 337, 486, 859, 988, 1072, 1574, 1605 |
| Fnu4HI | GCNGC | 5 cut(s) | 420, 579, 909, 942, 1320 |
| FokI | GGATG | 4 cut(s) | 1340, 1465, 1691, 1905 |
| FriOI | GRGCYC | 4 cut(s) | 502, 1223, 1582, 1870 |
| Fsp4HI | GCNGC | 5 cut(s) | 420, 579, 909, 942, 1320 |
| FspBI | CTAG | 7 cut(s) | 284, 618, 785, 1056, 1370, 1697, 1848 |
| GluI | GCNGC | 5 cut(s) | 420, 579, 909, 942, 1320 |
| GsaI | CCCAGC | 1 cut(s) | 1389 |
| HaeIII | GGCC | 2 cut(s) | 1462, 1868 |
| HapII | CCGG | 4 cut(s) | 33, 218, 1418, 1649 |
| HgaI | GACGC | 2 cut(s) | 100, 2042 |
| Hin1II | CATG | 7 cut(s) | 341, 490, 863, 992, 1076, 1578, 1609 |
| HincII | GTYRAC | 1 cut(s) | 927 |
| HindII | GTYRAC | 1 cut(s) | 927 |
| HindIII | AAGCTT | 1 cut(s) | 1360 |
| HinfI | GANTC | 6 cut(s) | 313, 605, 704, 835, 1064, 2032 |
| HpaII | CCGG | 4 cut(s) | 33, 218, 1418, 1649 |
| HphI | GGTGA | 5 cut(s) | 1115, 1293, 1712, 1868, 2054 |
| Hpy166II | GTNNAC | 3 cut(s) | 781, 927, 1195 |
| Hpy8I | GTNNAC | 3 cut(s) | 781, 927, 1195 |
| Hpy99I | CGWCG | 1 cut(s) | 2058 |
| HpyAV | CCTTC | 6 cut(s) | 193, 1000, 1110, 1336, 1846, 2109 |
| HpyCH4III | ACNGT | 4 cut(s) | 572, 612, 685, 1227 |
| HpyCH4IV | ACGT | 1 cut(s) | 724 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 131, 200, 419, 1319, 1815, 1912, 1991 |
| HpyF3I | CTNAG | 4 cut(s) | 506, 794, 1068, 1902 |
| HpySE526I | ACGT | 1 cut(s) | 724 |
| Hsp92II | CATG | 7 cut(s) | 341, 490, 863, 992, 1076, 1578, 1609 |
| Kzo9I | GATC | 4 cut(s) | 432, 1507, 1777, 2158 |
| LguI | GCTCTTC | 2 cut(s) | 507, 1211 |
| LmnI | GCTCC | 2 cut(s) | 179, 956 |
| Lsp1109I | GCAGC | 5 cut(s) | 406, 565, 920, 928, 1306 |
| LweI | GCATC | 6 cut(s) | 147, 565, 1306, 1487, 1669, 2098 |
| MaeI | CTAG | 7 cut(s) | 284, 618, 785, 1056, 1370, 1697, 1848 |
| MaeII | ACGT | 1 cut(s) | 724 |
| MaeIII | GTNAC | 7 cut(s) | 58, 378, 606, 720, 883, 1299, 1450 |
| MalI | GATC | 4 cut(s) | 434, 1509, 1779, 2160 |
| MboI | GATC | 4 cut(s) | 432, 1507, 1777, 2158 |
| MhlI | GDGCHC | 5 cut(s) | 502, 783, 1223, 1582, 1870 |
| MluCI | AATT | 9 cut(s) | 20, 239, 359, 550, 1514, 1770, 1934, 2058, 2094 |
| MlyI | GAGTC | 2 cut(s) | 614, 698 |
| MmeI | TCCRAC | 1 cut(s) | 1932 |
| MroXI | GAANNNNTTC | 2 cut(s) | 359, 2098 |
| MseI | TTAA | 7 cut(s) | 384, 426, 543, 1287, 1533, 1560, 1656 |
| MslI | CAYNNNNRTG | 1 cut(s) | 573 |
| MspA1I | CMGCKG | 1 cut(s) | 272 |
| MspI | CCGG | 4 cut(s) | 33, 218, 1418, 1649 |
| MspR9I | CCNGG | 7 cut(s) | 34, 218, 219, 1458, 1612, 1649, 1650 |
| Mva1269I | GAATGC | 1 cut(s) | 1261 |
| MvaI | CCWGG | 2 cut(s) | 1458, 1612 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 131, 200, 419, 1319, 1815, 1912, 1991 |
| NciI | CCSGG | 5 cut(s) | 34, 218, 219, 1649, 1650 |
| NdeII | GATC | 4 cut(s) | 432, 1507, 1777, 2158 |
| NheI | GCTAGC | 1 cut(s) | 617 |
| NlaIII | CATG | 7 cut(s) | 341, 490, 863, 992, 1076, 1578, 1609 |
| NlaIV | GGNNCC | 5 cut(s) | 800, 1410, 1503, 1868, 2146 |
| NmeAIII | GCCGAG | 1 cut(s) | 686 |
| NmuCI | GTSAC | 3 cut(s) | 606, 1299, 1450 |
| NspI | RCATGY | 2 cut(s) | 1076, 1609 |
| PaeI | GCATGC | 1 cut(s) | 1609 |
| PagI | TCATGA | 1 cut(s) | 337 |
| PciSI | GCTCTTC | 2 cut(s) | 507, 1211 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 721 |
| PctI | GAATGC | 1 cut(s) | 1261 |
| PdmI | GAANNNNTTC | 2 cut(s) | 359, 2098 |
| PfeI | GAWTC | 4 cut(s) | 313, 835, 1064, 2032 |
| PfoI | TCCNGGA | 1 cut(s) | 32 |
| PkrI | GCNGC | 5 cut(s) | 421, 580, 910, 943, 1321 |
| PleI | GAGTC | 2 cut(s) | 613, 698 |
| PpsI | GAGTC | 2 cut(s) | 613, 698 |
| PpuMI | RGGWCCY | 1 cut(s) | 2145 |
| Psp124BI | GAGCTC | 1 cut(s) | 502 |
| Psp5II | RGGWCCY | 1 cut(s) | 2145 |
| Psp6I | CCWGG | 2 cut(s) | 1456, 1610 |
| PspEI | GGTNACC | 1 cut(s) | 1299 |
| PspFI | CCCAGC | 1 cut(s) | 1385 |
| PspGI | CCWGG | 2 cut(s) | 1456, 1610 |
| PspN4I | GGNNCC | 5 cut(s) | 800, 1410, 1503, 1868, 2146 |
| PspOMI | GGGCCC | 1 cut(s) | 1866 |
| PspPI | GGNCC | 4 cut(s) | 1460, 1866, 1867, 2145 |
| PspPPI | RGGWCCY | 1 cut(s) | 2145 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 243, 275, 1145, 1177 |
| PstI | CTGCAG | 1 cut(s) | 321 |
| PvuII | CAGCTG | 1 cut(s) | 272 |
| RsaI | GTAC | 3 cut(s) | 1616, 1762, 1874 |
| RsaNI | GTAC | 3 cut(s) | 1615, 1761, 1873 |
| RseI | CAYNNNNRTG | 1 cut(s) | 573 |
| SacI | GAGCTC | 1 cut(s) | 502 |
| SapI | GCTCTTC | 2 cut(s) | 507, 1211 |
| SaqAI | TTAA | 7 cut(s) | 384, 426, 543, 1287, 1533, 1560, 1656 |
| SatI | GCNGC | 5 cut(s) | 420, 579, 909, 942, 1320 |
| Sau3AI | GATC | 4 cut(s) | 432, 1507, 1777, 2158 |
| Sau96I | GGNCC | 4 cut(s) | 1460, 1866, 1867, 2145 |
| ScaI | AGTACT | 1 cut(s) | 1762 |
| SchI | GAGTC | 2 cut(s) | 614, 698 |
| ScrFI | CCNGG | 7 cut(s) | 34, 218, 219, 1458, 1612, 1649, 1650 |
| SduI | GDGCHC | 5 cut(s) | 502, 783, 1223, 1582, 1870 |
| SfaNI | GCATC | 6 cut(s) | 147, 565, 1306, 1487, 1669, 2098 |
| SfcI | CTRYAG | 2 cut(s) | 90, 317 |
| SinI | GGWCC | 1 cut(s) | 2145 |
| SmaI | CCCGGG | 2 cut(s) | 219, 1650 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 573 |
| SmlI | CTYRAG | 1 cut(s) | 224 |
| SmoI | CTYRAG | 1 cut(s) | 224 |
| SphI | GCATGC | 1 cut(s) | 1609 |
| Sse9I | AATT | 9 cut(s) | 20, 239, 359, 550, 1514, 1770, 1934, 2058, 2094 |
| SsiI | CCGC | 1 cut(s) | 413 |
| SspI | AATATT | 3 cut(s) | 232, 598, 1291 |
| SspMI | CTAG | 7 cut(s) | 284, 618, 785, 1056, 1370, 1697, 1848 |
| SstI | GAGCTC | 1 cut(s) | 502 |
| StyD4I | CCNGG | 7 cut(s) | 32, 216, 217, 1456, 1610, 1647, 1648 |
| StyI | CCWWGG | 3 cut(s) | 1047, 1696, 1847 |
| TaaI | ACNGT | 4 cut(s) | 572, 612, 685, 1227 |
| TaiI | ACGT | 1 cut(s) | 727 |
| TaqI | TCGA | 5 cut(s) | 715, 739, 1139, 2056, 2092 |
| TaqII | GACCGA | 1 cut(s) | 477 |
| TasI | AATT | 9 cut(s) | 20, 239, 359, 550, 1514, 1770, 1934, 2058, 2094 |
| TatI | WGTACW | 2 cut(s) | 1760, 1872 |
| TfiI | GAWTC | 4 cut(s) | 313, 835, 1064, 2032 |
| Tru1I | TTAA | 7 cut(s) | 384, 426, 543, 1287, 1533, 1560, 1656 |
| Tru9I | TTAA | 7 cut(s) | 384, 426, 543, 1287, 1533, 1560, 1656 |
| TscAI | CASTG | 8 cut(s) | 298, 456, 575, 617, 690, 1044, 1230, 1237 |
| TseFI | GTSAC | 3 cut(s) | 606, 1299, 1450 |
| TseI | GCWGC | 5 cut(s) | 419, 578, 908, 941, 1319 |
| Tsp45I | GTSAC | 3 cut(s) | 606, 1299, 1450 |
| TspGWI | ACGGA | 1 cut(s) | 944 |
| TspMI | CCCGGG | 2 cut(s) | 217, 1648 |
| TspRI | CASTG | 8 cut(s) | 298, 456, 575, 617, 690, 1044, 1230, 1237 |
| VneI | GTGCAC | 1 cut(s) | 779 |
| VpaK11BI | GGWCC | 1 cut(s) | 2145 |
| XapI | RAATTY | 5 cut(s) | 20, 550, 1934, 2058, 2094 |
| XbaI | TCTAGA | 1 cut(s) | 1369 |
| XceI | RCATGY | 2 cut(s) | 1076, 1609 |
| XmaI | CCCGGG | 2 cut(s) | 217, 1648 |
| XmaJI | CCTAGG | 2 cut(s) | 1696, 1847 |
| XmnI | GAANNNNTTC | 2 cut(s) | 359, 2098 |
| XspI | CTAG | 7 cut(s) | 284, 618, 785, 1056, 1370, 1697, 1848 |
| ZrmI | AGTACT | 1 cut(s) | 1762 |