Domain of unknown function (DUF3444)
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 407 |
| AccB1I | GGYRCC | 1 cut(s) | 407 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2087 |
| AccI | GTMKAC | 1 cut(s) | 1045 |
| AciI | CCGC | 2 cut(s) | 311, 788 |
| AclWI | GGATC | 5 cut(s) | 49, 196, 2072, 2162, 2639 |
| AcsI | RAATTY | 3 cut(s) | 514, 907, 2580 |
| AcuI | CTGAAG | 5 cut(s) | 200, 822, 917, 1026, 2268 |
| AfaI | GTAC | 3 cut(s) | 409, 537, 596 |
| AfeI | AGCGCT | 1 cut(s) | 397 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 64, 704, 2087, 2185, 2339, 2362, 2368 |
| AgeI | ACCGGT | 1 cut(s) | 544 |
| AgsI | TTSAA | 6 cut(s) | 714, 759, 875, 912, 1038, 2543 |
| AhlI | ACTAGT | 1 cut(s) | 506 |
| AjnI | CCWGG | 6 cut(s) | 1025, 1970, 2131, 2153, 2348, 2361 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 691, 723 |
| AleI | CACNNNNGTG | 1 cut(s) | 509 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 1989, 2021, 2604, 2636 |
| AluBI | AGCT | 8 cut(s) | 121, 328, 572, 695, 722, 2316, 2516, 2732 |
| AluI | AGCT | 8 cut(s) | 121, 328, 572, 695, 722, 2316, 2516, 2732 |
| Alw21I | GWGCWC | 2 cut(s) | 2022, 2734 |
| AlwI | GGATC | 5 cut(s) | 49, 196, 2072, 2162, 2639 |
| Aor51HI | AGCGCT | 1 cut(s) | 397 |
| AoxI | GGCC | 2 cut(s) | 1239, 2352 |
| ApaI | GGGCCC | 1 cut(s) | 2356 |
| ApoI | RAATTY | 3 cut(s) | 514, 907, 2580 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 609, 641 |
| AsiGI | ACCGGT | 1 cut(s) | 544 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 370, 2808 |
| Asp718I | GGTACC | 1 cut(s) | 407 |
| AspA2I | CCTAGG | 2 cut(s) | 640, 2333 |
| AspLEI | GCGC | 4 cut(s) | 398, 1293, 2242, 2462 |
| AspS9I | GGNCC | 6 cut(s) | 449, 668, 890, 1240, 2352, 2353 |
| AsuHPI | GGTGA | 7 cut(s) | 974, 1144, 2143, 2155, 2195, 2683, 2764 |
| AvaII | GGWCC | 3 cut(s) | 449, 668, 890 |
| AvrII | CCTAGG | 2 cut(s) | 640, 2333 |
| BaeGI | GKGCMC | 1 cut(s) | 2356 |
| BanI | GGYRCC | 1 cut(s) | 407 |
| BanII | GRGCYC | 3 cut(s) | 2166, 2356, 2734 |
| BauI | CACGAG | 1 cut(s) | 580 |
| Bbv12I | GWGCWC | 2 cut(s) | 2022, 2734 |
| BbvCI | CCTCAGC | 1 cut(s) | 117 |
| BccI | CCATC | 4 cut(s) | 82, 760, 1205, 2081 |
| BciT130I | CCWGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| BciVI | GTATCC | 1 cut(s) | 740 |
| BcuI | ACTAGT | 1 cut(s) | 506 |
| BfaI | CTAG | 5 cut(s) | 507, 641, 1182, 2334, 2821 |
| BfoI | RGCGCY | 2 cut(s) | 399, 2463 |
| BfuI | GTATCC | 1 cut(s) | 740 |
| BglII | AGATCT | 1 cut(s) | 1031 |
| BlnI | CCTAGG | 2 cut(s) | 640, 2333 |
| BlpI | GCTNAGC | 1 cut(s) | 2517 |
| Bme1390I | CCNGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| Bme18I | GGWCC | 3 cut(s) | 449, 668, 890 |
| BmgT120I | GGNCC | 6 cut(s) | 449, 668, 890, 1240, 2352, 2353 |
| BmiI | GGNNCC | 8 cut(s) | 409, 451, 669, 814, 1992, 2163, 2354, 2792 |
| BmrFI | CCNGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| BmrI | ACTGGG | 1 cut(s) | 315 |
| BmsI | GCATC | 3 cut(s) | 626, 643, 1211 |
| BmuI | ACTGGG | 1 cut(s) | 315 |
| BpmI | CTGGAG | 2 cut(s) | 2180, 2484 |
| Bpu10I | CCTNAGC | 1 cut(s) | 117 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2517 |
| BpuEI | CTTGAG | 1 cut(s) | 2519 |
| BsaBI | GATNNNNATC | 1 cut(s) | 751 |
| BsaWI | WCCGGW | 1 cut(s) | 544 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 64, 704, 2087, 2185, 2339, 2362, 2368 |
| Bse118I | RCCGGY | 1 cut(s) | 544 |
| Bse3DI | GCAATG | 3 cut(s) | 39, 1129, 1360 |
| Bse8I | GATNNNNATC | 1 cut(s) | 751 |
| BseBI | CCWGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| BseGI | GGATG | 4 cut(s) | 283, 1216, 1261, 1967 |
| BseJI | GATNNNNATC | 1 cut(s) | 751 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 64, 704, 2087, 2185, 2339, 2362, 2368 |
| BseMI | GCAATG | 3 cut(s) | 39, 1129, 1360 |
| BseMII | CTCAG | 7 cut(s) | 131, 506, 873, 1992, 2035, 2379, 2508 |
| BseRI | GAGGAG | 2 cut(s) | 951, 2790 |
| BseSI | GKGCMC | 1 cut(s) | 2356 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2677 |
| BshFI | GGCC | 2 cut(s) | 1241, 2354 |
| BshNI | GGYRCC | 1 cut(s) | 407 |
| BshTI | ACCGGT | 1 cut(s) | 544 |
| BsiEI | CGRYCG | 1 cut(s) | 2677 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2022, 2734 |
| BsiSI | CCGG | 1 cut(s) | 545 |
| BslFI | GGGAC | 1 cut(s) | 754 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 64, 704, 2087, 2185, 2339, 2362, 2368 |
| BsmFI | GGGAC | 1 cut(s) | 754 |
| BsmI | GAATGC | 3 cut(s) | 210, 949, 2401 |
| BsnI | GGCC | 2 cut(s) | 1241, 2354 |
| Bsp120I | GGGCCC | 1 cut(s) | 2352 |
| Bsp1286I | GDGCHC | 4 cut(s) | 2022, 2166, 2356, 2734 |
| Bsp1407I | TGTACA | 1 cut(s) | 535 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2517 |
| Bsp19I | CCATGG | 1 cut(s) | 1341 |
| BspACI | CCGC | 2 cut(s) | 311, 788 |
| BspANI | GGCC | 2 cut(s) | 1241, 2354 |
| BspCNI | CTCAG | 7 cut(s) | 130, 505, 874, 1993, 2034, 2380, 2509 |
| BspHI | TCATGA | 1 cut(s) | 2278 |
| BspLI | GGNNCC | 8 cut(s) | 409, 451, 669, 814, 1992, 2163, 2354, 2792 |
| BspPI | GGATC | 5 cut(s) | 49, 196, 2072, 2162, 2639 |
| BspT107I | GGYRCC | 1 cut(s) | 407 |
| BsrDI | GCAATG | 3 cut(s) | 39, 1129, 1360 |
| BsrFI | RCCGGY | 1 cut(s) | 544 |
| BsrGI | TGTACA | 1 cut(s) | 535 |
| BssAI | RCCGGY | 1 cut(s) | 544 |
| BssNAI | GTATAC | 1 cut(s) | 1046 |
| BssSI | CACGAG | 1 cut(s) | 580 |
| BssT1I | CCWWGG | 5 cut(s) | 361, 640, 1341, 2179, 2333 |
| Bst1107I | GTATAC | 1 cut(s) | 1046 |
| Bst2BI | CACGAG | 1 cut(s) | 580 |
| Bst2UI | CCWGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| Bst6I | CTCTTC | 1 cut(s) | 1184 |
| BstAUI | TGTACA | 1 cut(s) | 535 |
| BstC8I | GCNNGC | 5 cut(s) | 574, 2093, 2514, 2661, 2734 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2360 |
| BstF5I | GGATG | 4 cut(s) | 283, 1216, 1261, 1967 |
| BstH2I | RGCGCY | 2 cut(s) | 399, 2463 |
| BstHHI | GCGC | 4 cut(s) | 398, 1293, 2242, 2462 |
| BstMCI | CGRYCG | 1 cut(s) | 2677 |
| BstNI | CCWGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| BstNSI | RCATGY | 3 cut(s) | 2095, 2112, 2223 |
| BstSCI | CCNGG | 6 cut(s) | 1025, 1970, 2131, 2153, 2348, 2361 |
| BstSLI | GKGCMC | 1 cut(s) | 2356 |
| BstX2I | RGATCY | 2 cut(s) | 54, 1031 |
| BstYI | RGATCY | 2 cut(s) | 54, 1031 |
| BstZ17I | GTATAC | 1 cut(s) | 1046 |
| BsuI | GTATCC | 1 cut(s) | 740 |
| BsuRI | GGCC | 2 cut(s) | 1241, 2354 |
| BtsCI | GGATG | 4 cut(s) | 283, 1216, 1261, 1967 |
| BtsI | GCAGTG | 1 cut(s) | 1173 |
| Cac8I | GCNNGC | 5 cut(s) | 574, 2093, 2514, 2661, 2734 |
| CciI | TCATGA | 1 cut(s) | 2278 |
| CfoI | GCGC | 4 cut(s) | 398, 1293, 2242, 2462 |
| Cfr10I | RCCGGY | 1 cut(s) | 544 |
| Cfr13I | GGNCC | 6 cut(s) | 449, 668, 890, 1240, 2352, 2353 |
| CseI | GACGC | 2 cut(s) | 1007, 2109 |
| Csp6I | GTAC | 3 cut(s) | 408, 536, 595 |
| CspAI | ACCGGT | 1 cut(s) | 544 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2581, 2616 |
| CviAII | CATG | 7 cut(s) | 1342, 1963, 2064, 2092, 2109, 2220, 2279 |
| CviQI | GTAC | 3 cut(s) | 408, 536, 595 |
| DraI | TTTAAA | 2 cut(s) | 73, 2050 |
| Eam1104I | CTCTTC | 1 cut(s) | 1184 |
| EarI | CTCTTC | 1 cut(s) | 1184 |
| EciI | GGCGGA | 1 cut(s) | 326 |
| Ecl136II | GAGCTC | 1 cut(s) | 2732 |
| Eco130I | CCWWGG | 5 cut(s) | 361, 640, 1341, 2179, 2333 |
| Eco24I | GRGCYC | 3 cut(s) | 2166, 2356, 2734 |
| Eco47I | GGWCC | 3 cut(s) | 449, 668, 890 |
| Eco47III | AGCGCT | 1 cut(s) | 397 |
| Eco53kI | GAGCTC | 1 cut(s) | 2732 |
| Eco57I | CTGAAG | 5 cut(s) | 200, 822, 917, 1026, 2268 |
| EcoICRI | GAGCTC | 1 cut(s) | 2732 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2360 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2353 |
| EcoRI | GAATTC | 1 cut(s) | 907 |
| EcoRII | CCWGG | 6 cut(s) | 1025, 1970, 2131, 2153, 2348, 2361 |
| EcoT14I | CCWWGG | 5 cut(s) | 361, 640, 1341, 2179, 2333 |
| EcoT22I | ATGCAT | 2 cut(s) | 1204, 2110 |
| EcoT38I | GRGCYC | 3 cut(s) | 2166, 2356, 2734 |
| ErhI | CCWWGG | 5 cut(s) | 361, 640, 1341, 2179, 2333 |
| FaeI | CATG | 7 cut(s) | 1345, 1966, 2067, 2095, 2112, 2223, 2282 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2108, 2140 |
| FaqI | GGGAC | 1 cut(s) | 754 |
| FatI | CATG | 7 cut(s) | 1341, 1962, 2063, 2091, 2108, 2219, 2278 |
| FblI | GTMKAC | 1 cut(s) | 1045 |
| FokI | GGATG | 4 cut(s) | 270, 1223, 1268, 1954 |
| FriOI | GRGCYC | 3 cut(s) | 2166, 2356, 2734 |
| FspBI | CTAG | 5 cut(s) | 507, 641, 1182, 2334, 2821 |
| GlaI | GCGC | 4 cut(s) | 397, 1292, 2241, 2461 |
| GsuI | CTGGAG | 2 cut(s) | 2180, 2484 |
| HaeII | RGCGCY | 2 cut(s) | 399, 2463 |
| HaeIII | GGCC | 2 cut(s) | 1241, 2354 |
| HapII | CCGG | 1 cut(s) | 545 |
| HgaI | GACGC | 2 cut(s) | 1007, 2109 |
| HhaI | GCGC | 4 cut(s) | 398, 1293, 2242, 2462 |
| Hin1II | CATG | 7 cut(s) | 1345, 1966, 2067, 2095, 2112, 2223, 2282 |
| Hin6I | GCGC | 4 cut(s) | 396, 1291, 2240, 2460 |
| HinP1I | GCGC | 4 cut(s) | 396, 1291, 2240, 2460 |
| HindIII | AAGCTT | 1 cut(s) | 720 |
| HpaII | CCGG | 1 cut(s) | 545 |
| HphI | GGTGA | 7 cut(s) | 974, 1144, 2143, 2155, 2195, 2683, 2764 |
| Hpy166II | GTNNAC | 5 cut(s) | 160, 303, 587, 893, 1046 |
| Hpy8I | GTNNAC | 5 cut(s) | 160, 303, 587, 893, 1046 |
| HpyAV | CCTTC | 7 cut(s) | 172, 797, 1011, 2332, 2603, 2715, 2730 |
| HpyCH4IV | ACGT | 2 cut(s) | 499, 779 |
| HpySE526I | ACGT | 2 cut(s) | 499, 779 |
| Hsp92II | CATG | 7 cut(s) | 1345, 1966, 2067, 2095, 2112, 2223, 2282 |
| HspAI | GCGC | 4 cut(s) | 396, 1291, 2240, 2460 |
| KpnI | GGTACC | 1 cut(s) | 411 |
| LmnI | GCTCC | 4 cut(s) | 77, 700, 812, 2161 |
| LweI | GCATC | 3 cut(s) | 626, 643, 1211 |
| MaeI | CTAG | 5 cut(s) | 507, 641, 1182, 2334, 2821 |
| MaeII | ACGT | 2 cut(s) | 499, 779 |
| MaeIII | GTNAC | 7 cut(s) | 495, 500, 1019, 1320, 2034, 2588, 2689 |
| MboII | GAAGA | 8 cut(s) | 206, 702, 747, 1026, 1201, 2261, 2691, 2767 |
| MflI | RGATCY | 2 cut(s) | 54, 1031 |
| MhlI | GDGCHC | 4 cut(s) | 2022, 2166, 2356, 2734 |
| MlyI | GAGTC | 4 cut(s) | 102, 612, 893, 2787 |
| MmeI | TCCRAC | 1 cut(s) | 832 |
| Mph1103I | ATGCAT | 2 cut(s) | 1204, 2110 |
| MroXI | GAANNNNTTC | 2 cut(s) | 370, 2808 |
| MseI | TTAA | 7 cut(s) | 72, 140, 324, 401, 438, 1197, 2049 |
| MslI | CAYNNNNRTG | 2 cut(s) | 462, 509 |
| MspA1I | CMGCKG | 1 cut(s) | 2516 |
| MspI | CCGG | 1 cut(s) | 545 |
| MspR9I | CCNGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| Mva1269I | GAATGC | 3 cut(s) | 210, 949, 2401 |
| MvaI | CCWGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| NcoI | CCATGG | 1 cut(s) | 1341 |
| NlaIII | CATG | 7 cut(s) | 1345, 1966, 2067, 2095, 2112, 2223, 2282 |
| NlaIV | GGNNCC | 8 cut(s) | 409, 451, 669, 814, 1992, 2163, 2354, 2792 |
| NmuCI | GTSAC | 3 cut(s) | 495, 1019, 2689 |
| NsiI | ATGCAT | 2 cut(s) | 1204, 2110 |
| NspI | RCATGY | 3 cut(s) | 2095, 2112, 2223 |
| OliI | CACNNNNGTG | 1 cut(s) | 509 |
| PaeI | GCATGC | 1 cut(s) | 2095 |
| PagI | TCATGA | 1 cut(s) | 2278 |
| PctI | GAATGC | 3 cut(s) | 210, 949, 2401 |
| PdmI | GAANNNNTTC | 2 cut(s) | 370, 2808 |
| PfeI | GAWTC | 6 cut(s) | 220, 645, 674, 685, 956, 2762 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2087 |
| PinAI | ACCGGT | 1 cut(s) | 544 |
| Ple19I | CGATCG | 1 cut(s) | 2677 |
| PleI | GAGTC | 4 cut(s) | 102, 612, 892, 2786 |
| PpsI | GAGTC | 4 cut(s) | 102, 612, 892, 2786 |
| Psp124BI | GAGCTC | 1 cut(s) | 2734 |
| Psp6I | CCWGG | 6 cut(s) | 1025, 1970, 2131, 2153, 2348, 2361 |
| PspGI | CCWGG | 6 cut(s) | 1025, 1970, 2131, 2153, 2348, 2361 |
| PspN4I | GGNNCC | 8 cut(s) | 409, 451, 669, 814, 1992, 2163, 2354, 2792 |
| PspOMI | GGGCCC | 1 cut(s) | 2352 |
| PspPI | GGNCC | 6 cut(s) | 449, 668, 890, 1240, 2352, 2353 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 141, 173 |
| PsuI | RGATCY | 2 cut(s) | 54, 1031 |
| PvuI | CGATCG | 1 cut(s) | 2677 |
| PvuII | CAGCTG | 1 cut(s) | 2516 |
| RsaI | GTAC | 3 cut(s) | 409, 537, 596 |
| RsaNI | GTAC | 3 cut(s) | 408, 536, 595 |
| RseI | CAYNNNNRTG | 2 cut(s) | 462, 509 |
| SacI | GAGCTC | 1 cut(s) | 2734 |
| SaqAI | TTAA | 7 cut(s) | 72, 140, 324, 401, 438, 1197, 2049 |
| Sau96I | GGNCC | 6 cut(s) | 449, 668, 890, 1240, 2352, 2353 |
| SchI | GAGTC | 4 cut(s) | 102, 612, 893, 2787 |
| ScrFI | CCNGG | 6 cut(s) | 1027, 1972, 2133, 2155, 2350, 2363 |
| SduI | GDGCHC | 4 cut(s) | 2022, 2166, 2356, 2734 |
| SfaNI | GCATC | 3 cut(s) | 626, 643, 1211 |
| SinI | GGWCC | 3 cut(s) | 449, 668, 890 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 462, 509 |
| SmlI | CTYRAG | 1 cut(s) | 2534 |
| SmoI | CTYRAG | 1 cut(s) | 2534 |
| SpeI | ACTAGT | 1 cut(s) | 506 |
| SphI | GCATGC | 1 cut(s) | 2095 |
| SsiI | CCGC | 2 cut(s) | 311, 788 |
| SspI | AATATT | 1 cut(s) | 487 |
| SspMI | CTAG | 5 cut(s) | 507, 641, 1182, 2334, 2821 |
| SstI | GAGCTC | 1 cut(s) | 2734 |
| StyD4I | CCNGG | 6 cut(s) | 1025, 1970, 2131, 2153, 2348, 2361 |
| StyI | CCWWGG | 5 cut(s) | 361, 640, 1341, 2179, 2333 |
| TaiI | ACGT | 2 cut(s) | 502, 782 |
| TaqI | TCGA | 4 cut(s) | 616, 1986, 2673, 2677 |
| TatI | WGTACW | 1 cut(s) | 535 |
| TauI | GCSGC | 1 cut(s) | 791 |
| TfiI | GAWTC | 6 cut(s) | 220, 645, 674, 685, 956, 2762 |
| Tru1I | TTAA | 7 cut(s) | 72, 140, 324, 401, 438, 1197, 2049 |
| Tru9I | TTAA | 7 cut(s) | 72, 140, 324, 401, 438, 1197, 2049 |
| TseFI | GTSAC | 3 cut(s) | 495, 1019, 2689 |
| Tsp45I | GTSAC | 3 cut(s) | 495, 1019, 2689 |
| TspDTI | ATGAA | 8 cut(s) | 252, 272, 1080, 1116, 1326, 1347, 2704, 2817 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2087 |
| VpaK11BI | GGWCC | 3 cut(s) | 449, 668, 890 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2360 |
| XapI | RAATTY | 3 cut(s) | 514, 907, 2580 |
| XceI | RCATGY | 3 cut(s) | 2095, 2112, 2223 |
| XmaJI | CCTAGG | 2 cut(s) | 640, 2333 |
| XmiI | GTMKAC | 1 cut(s) | 1045 |
| XmnI | GAANNNNTTC | 2 cut(s) | 370, 2808 |
| XspI | CTAG | 5 cut(s) | 507, 641, 1182, 2334, 2821 |
| Zsp2I | ATGCAT | 2 cut(s) | 1204, 2110 |