FvH4_6g04680

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000587
Physical Location & Seq
Forward (+)
2582810 .. 2585224
2415 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g04680.t1

Sequence Viewer

Length: 2415 bp
ATGGAGTGCAACAAAGACGAGGCAGTCAGGGCAATGCAACTTTCAGAGAAAAAGATTCAAAATAAGGACTTTAAAGGAGCAAAGGAGATGGCACTGAAGGCTCAACGACTCTACCCTCAGCTTGACAACATTTCTCGATTAATTACAGTATGTGAAGTTCACTGTGCAGCAGAAAAGAAGGTAGGGGGATCAGAAATGGACTGGTATGGCATTCTTCAGGTTCAGCAATATGAGGACAGAGAAACCATCAAAAAACAATACAAAAAACTTGGGCTGCTACTTCATCCTGATAAGACTAGTTTAACTGGGGCGGAGGGTGCTTTTAAGCTGATCGGGGAAGCATATAGGGTGCTGTTTGACCCAGGAAGTCGTTCTAAATATGACATCAAGTATAGCACTTTACTGGGTACTGGCACCAGATCATTTGGTCATCACTCAAGTATTAACTTCTTTGGACCCAAATATTCCAGTGCTGGAAGTAGCGTTCCTCAGTCACGGTATACTAGTGTGAATCTACAACAGCCGGTGAATGTACAACAACCTGTGCAACCAGACACAATCAAGATAGCTTGCCCCTCTTGTAAAAGAATGTACGATTACAACTTTGCAAATCGGCTCATATTTTGTCAAAGATGCCTAGGAATTTTTGATGCCTCTGATTTGGGTACAGAATCTCTTGGGAATCAATTCCCAAATCACACAGTGGCTCCAAGTCAAGGTTCTTCAAAAGGAGCTTTACAAAGTAATGGTGGGACTGGAACCCGTTCTTCCAAAACATTTCATAATGGAAATGCAACGTCAAAGGCGGTAAGTGCTGCTGAAGTTGGTGGAGCCTCTGAGACTGTAAAGAGAGATATTGAGAATGGAGTTGGAATAGAGAAGCAAGGGGTTGAAAGGTCTGAGTCTAGTCTACGGAAGTCAAAGGATTCAAGAAAATCAAGAAATATGCACAGAAAAAGAGGAGAGAATTCGACTCTTGGTTCTGGTGATAGTTCCAAGACTGGAAAAGGAGCTCAAGCTGATTCTGATCTAGAAAAGGTTGGTAATCCTTCTGAAGTCAGGGAGAACCACACCAGGAGATCGTCGAGGAATATGCATAATCCTTCTTTCTTTGAAACTTTAGATGATGATAATGATGATGGTGATAATGCTGGCGATGTCAATGTGAATGGTGATGGAAATGTGGGTCCTTCGCAAGTGAGGGAAAGCTCTTTGTCCTCTGCTACTAGAAGGAAGAGGGTCAATGGATCTGCGGATGGTGGAGTATATAGGCCAACTGTTTTGGCGCTTTTTGCAATGGATGAGTATAAGAAATTAGGAAATCAAAGATTGAGACGCAAAAAGAACTACACTAGTGAAATTATGCAATGGCAGGTAGAAGAAACATCCGTGGCAGCAGATGGCAATGGCAGCAAGTCCATGGTCGATAACAATGGGAGGAAGTCCATGGCAGATATTAAGGGCAGGAAGTCCATAGCAGATAACAATGGCAGGAAGTCCATGGCAGATAACAATGGCAGGAAGTCCATGGCAGATAACAACGGCAGCAAGTCCATGACATCCATGCGAAAGATCAACGAGGTTCCTGAACCTGAGTACCATACATTTGCGCTCAGTAAAGCTGAGTTACAGAGAACTATTAAAGCCCATCAAACATGGGTTCTCTATGATCCAGCAGATGGCATGCCAAGACACTATGCATGTATCAGGAAAGTATTGAGCCCTGGATTTAAGGTGAAAATCACCTGGCTGGAGCCTAATCCTGATGACCAAGGTGAGGTTGATTGGTGTAGCAAAAAGTTGCCAGTTGCATGTGGTAAGTTTGGACTTGCGCTCACTGAAGAAGTTACGGATGATACTGTGTTTTCTCATGAATATATACACTCCACAAAAGGCAAGGATAAGAGCTCTATTCGTATATATCCGAGGAAGGGAGAAACCTGGGCCCTCTACCAAGACTGGGATTTGGGGTGGAGTTCTGAGCCTGAAAAGCATTCACAATACAAGTTTGATTTCGTAGAACTCCAGTCAGATTTTTCTGAAAGGAGTGGTGCTGGAGTTTCTTATTTAGGGAAAGTAAAAGGATTTGTCAGTTTGTTTGAGCCAGCTGAGCAGCATGGGGTTCTCAGGTTTCAAGTGTCACCTAATGAGCTATATAGATTTTCTCATCAGATTCCCTCTCACAAGATGACCGGTCGTGAAGGATACGGTGTTCCTGCAGATTCTTTCGAGTTTGATCCTGCTTCTTTGCCTTCCAGTCTTTTTGATCGGAGAAGCACTGTCACCATAGCCAAACCTTCTGGCTTTTTACCTTCTGGAAGAGCTCGCCCTGTTGTGAACCAGGTGAAGAAAGATACTGAAAGGGGGGAAGACAAGAACGGGAACCTCAACATTGAACCGATTGTGCTAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

805

Amino Acids

89.12

Weight (kDa)

9.03

Isoelectric Point (pI)

43.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 67 - 128 2.3e-17 DnaJ domain
DUF3444 PF11926 526 - 734 7e-68 Domain of unknown function (DUF3444)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 23
Acc36I ACCTGC 1 cut(s) 1363
AccB1I GGYRCC 1 cut(s) 413
AccB7I CCANNNNNTGG 1 cut(s) 1679
AccI GTMKAC 2 cut(s) 500, 910
AciI CCGC 3 cut(s) 311, 806, 1253
AclWI GGATC 4 cut(s) 196, 1255, 1664, 2231
AcsI RAATTY 2 cut(s) 642, 967
AcuI CTGAAG 5 cut(s) 116, 200, 840, 1074, 1860
AdeI CACNNNGTG 1 cut(s) 703
AfaI GTAC 5 cut(s) 409, 534, 593, 667, 1598
AfiI CCNNNNNNNGG 5 cut(s) 716, 1679, 1777, 1931, 1960
AgeI ACCGGT 1 cut(s) 2192
AgsI TTSAA 7 cut(s) 59, 726, 893, 930, 1115, 2135, 2396
AhlI ACTAGT 3 cut(s) 296, 503, 1352
AjnI CCWGG 6 cut(s) 361, 1073, 1723, 1745, 1940, 2340
AjuI GAANNNNNNNTTGG 2 cut(s) 703, 735
AloI GAACNNNNNNTCC 4 cut(s) 468, 500, 2196, 2228
Alw21I GWGCWC 3 cut(s) 1015, 1910, 2326
Alw26I GTCTC 2 cut(s) 833, 1327
AlwI GGATC 4 cut(s) 196, 1255, 1664, 2231
AoxI GGCC 2 cut(s) 1271, 1944
ApaI GGGCCC 1 cut(s) 1948
ApeKI GCWGC 7 cut(s) 167, 274, 815, 1394, 1410, 1545, 2113
ApoI RAATTY 2 cut(s) 642, 967
AseI ATTAAT 1 cut(s) 140
AsiGI ACCGGT 1 cut(s) 2192
Asp700I GAANNNNTTC 3 cut(s) 370, 686, 763
AspA2I CCTAGG 1 cut(s) 637
AspLEI GCGC 3 cut(s) 1288, 1612, 1834
AspS9I GGNCC 4 cut(s) 455, 1187, 1944, 1945
AvaII GGWCC 2 cut(s) 455, 1187
AvrII CCTAGG 1 cut(s) 637
BaeGI GKGCMC 1 cut(s) 1948
BaeI ACNNNNGTAYC 2 cut(s) 1580, 1613
BanI GGYRCC 1 cut(s) 413
BanII GRGCYC 5 cut(s) 1015, 1724, 1910, 1948, 2326
BbsI GAAGAC 1 cut(s) 2376
Bbv12I GWGCWC 3 cut(s) 1015, 1910, 2326
BbvCI CCTCAGC 1 cut(s) 117
BbvI GCAGC 7 cut(s) 179, 261, 802, 1406, 1422, 1557, 2125
BccI CCATC 8 cut(s) 82, 254, 1133, 1169, 1250, 1394, 1656, 1673
BceAI ACGGC 1 cut(s) 1558
BcgI CGANNNNNNTGC 2 cut(s) 1075, 1109
BciT130I CCWGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
BciVI GTATCC 1 cut(s) 2198
BcoDI GTCTC 2 cut(s) 833, 1327
BcuI ACTAGT 3 cut(s) 296, 503, 1352
BfaI CTAG 9 cut(s) 297, 504, 638, 906, 1031, 1227, 1353, 2408, 2413
BfmI CTRYAG 1 cut(s) 2217
BfoI RGCGCY 1 cut(s) 1289
BfuAI ACCTGC 1 cut(s) 1363
BfuI GTATCC 1 cut(s) 2198
BisI GCNGC 7 cut(s) 168, 275, 816, 1395, 1411, 1546, 2114
BlnI CCTAGG 1 cut(s) 637
BlpI GCTNAGC 1 cut(s) 2109
BlsI GCNGC 7 cut(s) 169, 276, 817, 1396, 1412, 1547, 2115
Bme1390I CCNGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
Bme18I GGWCC 2 cut(s) 455, 1187
BmgT120I GGNCC 4 cut(s) 455, 1187, 1944, 1945
BmrFI CCNGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
BmrI ACTGGG 3 cut(s) 315, 413, 1969
BmsI GCATC 2 cut(s) 623, 640
BmuI ACTGGG 3 cut(s) 315, 413, 1969
BpiI GAAGAC 1 cut(s) 2376
BpmI CTGGAG 3 cut(s) 1772, 2009, 2076
Bpu10I CCTNAGC 1 cut(s) 117
Bpu1102I GCTNAGC 1 cut(s) 2109
BpuEI CTTGAG 2 cut(s) 421, 999
BsaBI GATNNNNATC 1 cut(s) 1026
BsaWI WCCGGW 1 cut(s) 2192
BsaXI ACNNNNNCTCC 2 cut(s) 691, 721
Bsc4I CCNNNNNNNGG 5 cut(s) 716, 1679, 1777, 1931, 1960
Bse118I RCCGGY 2 cut(s) 523, 2192
Bse3DI GCAATG 4 cut(s) 39, 1302, 1373, 1411
Bse8I GATNNNNATC 1 cut(s) 1026
BseBI CCWGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
BseGI GGATG 6 cut(s) 283, 1261, 1306, 1385, 1559, 1858
BseJI GATNNNNATC 1 cut(s) 1026
BseLI CCNNNNNNNGG 5 cut(s) 716, 1679, 1777, 1931, 1960
BseMI GCAATG 4 cut(s) 39, 1302, 1373, 1411
BseRI GAGGAG 1 cut(s) 975
BseSI GKGCMC 1 cut(s) 1948
BseXI GCAGC 7 cut(s) 179, 261, 802, 1406, 1422, 1557, 2125
BsgI GTGCAG 1 cut(s) 186
Bsh1285I CGRYCG 1 cut(s) 2197
BshFI GGCC 2 cut(s) 1273, 1946
BshNI GGYRCC 1 cut(s) 413
BshTI ACCGGT 1 cut(s) 2192
BsiEI CGRYCG 1 cut(s) 2197
BsiHKAI GWGCWC 3 cut(s) 1015, 1910, 2326
BsiSI CCGG 2 cut(s) 524, 2193
BslFI GGGAC 1 cut(s) 766
BslI CCNNNNNNNGG 5 cut(s) 716, 1679, 1777, 1931, 1960
BsmAI GTCTC 2 cut(s) 833, 1327
BsmBI CGTCTC 1 cut(s) 1327
BsmFI GGGAC 1 cut(s) 766
BsmI GAATGC 2 cut(s) 210, 1993
BsnI GGCC 2 cut(s) 1273, 1946
Bsp120I GGGCCC 1 cut(s) 1944
Bsp1286I GDGCHC 5 cut(s) 1015, 1724, 1910, 1948, 2326
Bsp1407I TGTACA 1 cut(s) 532
Bsp1720I GCTNAGC 1 cut(s) 2109
Bsp19I CCATGG 4 cut(s) 1419, 1446, 1500, 1527
BspACI CCGC 3 cut(s) 311, 806, 1253
BspANI GGCC 2 cut(s) 1273, 1946
BspHI TCATGA 1 cut(s) 1870
BspMAI CTGCAG 1 cut(s) 2221
BspMI ACCTGC 1 cut(s) 1363
BspPI GGATC 4 cut(s) 196, 1255, 1664, 2231
BspQI GCTCTTC 1 cut(s) 2314
BspT107I GGYRCC 1 cut(s) 413
BsrDI GCAATG 4 cut(s) 39, 1302, 1373, 1411
BsrFI RCCGGY 2 cut(s) 523, 2192
BsrGI TGTACA 1 cut(s) 532
BssAI RCCGGY 2 cut(s) 523, 2192
BssNAI GTATAC 1 cut(s) 501
BssT1I CCWWGG 6 cut(s) 637, 1419, 1446, 1500, 1527, 1771
Bst1107I GTATAC 1 cut(s) 501
Bst2UI CCWGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
Bst4CI ACNGT 9 cut(s) 148, 164, 498, 703, 844, 1279, 1861, 2210, 2281
Bst6I CTCTTC 2 cut(s) 1229, 2314
BstAUI TGTACA 1 cut(s) 532
BstC8I GCNNGC 5 cut(s) 571, 1153, 1685, 2106, 2326
BstDSI CCRYGG 5 cut(s) 1389, 1419, 1446, 1500, 1527
BstF5I GGATG 6 cut(s) 283, 1261, 1306, 1385, 1559, 1858
BstH2I RGCGCY 1 cut(s) 1289
BstHHI GCGC 3 cut(s) 1288, 1612, 1834
BstMAI GTCTC 2 cut(s) 833, 1327
BstMCI CGRYCG 1 cut(s) 2197
BstMWI GCNNNNNNNGC 8 cut(s) 29, 98, 317, 812, 1292, 1410, 1990, 2110
BstNI CCWGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
BstNSI RCATGY 3 cut(s) 1687, 1704, 1815
BstSCI CCNGG 6 cut(s) 361, 1073, 1723, 1745, 1940, 2340
BstSFI CTRYAG 1 cut(s) 2217
BstSLI GKGCMC 1 cut(s) 1948
BstV1I GCAGC 7 cut(s) 179, 261, 802, 1406, 1422, 1557, 2125
BstV2I GAAGAC 1 cut(s) 2376
BstX2I RGATCY 1 cut(s) 1247
BstYI RGATCY 1 cut(s) 1247
BstZ17I GTATAC 1 cut(s) 501
BsuI GTATCC 1 cut(s) 2198
BsuRI GGCC 2 cut(s) 1273, 1946
BtgI CCRYGG 5 cut(s) 1389, 1419, 1446, 1500, 1527
BtgZI GCGATG 1 cut(s) 1170
BtsCI GGATG 6 cut(s) 283, 1261, 1306, 1385, 1559, 1858
BtsIMutI CAGTG 6 cut(s) 92, 160, 475, 708, 1836, 2277
BveI ACCTGC 1 cut(s) 1363
Cac8I GCNNGC 5 cut(s) 571, 1153, 1685, 2106, 2326
CciI TCATGA 1 cut(s) 1870
CfoI GCGC 3 cut(s) 1288, 1612, 1834
Cfr10I RCCGGY 2 cut(s) 523, 2192
Cfr13I GGNCC 4 cut(s) 455, 1187, 1944, 1945
CseI GACGC 1 cut(s) 1344
CsiI ACCWGGT 1 cut(s) 2340
Csp6I GTAC 5 cut(s) 408, 533, 592, 666, 1597
CspAI ACCGGT 1 cut(s) 2192
CviQI GTAC 5 cut(s) 408, 533, 592, 666, 1597
DraI TTTAAA 1 cut(s) 73
DraIII CACNNNGTG 1 cut(s) 703
DrdI GACNNNNNNGTC 1 cut(s) 23
DseDI GACNNNNNNGTC 1 cut(s) 23
Eam1104I CTCTTC 2 cut(s) 1229, 2314
EarI CTCTTC 2 cut(s) 1229, 2314
EciI GGCGGA 1 cut(s) 326
Ecl136II GAGCTC 3 cut(s) 1013, 1908, 2324
Eco130I CCWWGG 6 cut(s) 637, 1419, 1446, 1500, 1527, 1771
Eco24I GRGCYC 5 cut(s) 1015, 1724, 1910, 1948, 2326
Eco47I GGWCC 2 cut(s) 455, 1187
Eco53kI GAGCTC 3 cut(s) 1013, 1908, 2324
Eco57I CTGAAG 5 cut(s) 116, 200, 840, 1074, 1860
EcoICRI GAGCTC 3 cut(s) 1013, 1908, 2324
EcoO109I RGGNCCY 2 cut(s) 1187, 1945
EcoRI GAATTC 1 cut(s) 967
EcoRII CCWGG 6 cut(s) 361, 1073, 1723, 1745, 1940, 2340
EcoT14I CCWWGG 6 cut(s) 637, 1419, 1446, 1500, 1527, 1771
EcoT22I ATGCAT 2 cut(s) 1098, 1702
EcoT38I GRGCYC 5 cut(s) 1015, 1724, 1910, 1948, 2326
ErhI CCWWGG 6 cut(s) 637, 1419, 1446, 1500, 1527, 1771
Esp3I CGTCTC 1 cut(s) 1327
FaqI GGGAC 1 cut(s) 766
FblI GTMKAC 2 cut(s) 500, 910
Fnu4HI GCNGC 7 cut(s) 168, 275, 816, 1395, 1411, 1546, 2114
FokI GGATG 6 cut(s) 270, 1268, 1313, 1372, 1546, 1865
FriOI GRGCYC 5 cut(s) 1015, 1724, 1910, 1948, 2326
Fsp4HI GCNGC 7 cut(s) 168, 275, 816, 1395, 1411, 1546, 2114
FspBI CTAG 9 cut(s) 297, 504, 638, 906, 1031, 1227, 1353, 2408, 2413
GlaI GCGC 3 cut(s) 1287, 1611, 1833
GluI GCNGC 7 cut(s) 168, 275, 816, 1395, 1411, 1546, 2114
GsuI CTGGAG 3 cut(s) 1772, 2009, 2076
HaeII RGCGCY 1 cut(s) 1289
HaeIII GGCC 2 cut(s) 1273, 1946
HapII CCGG 2 cut(s) 524, 2193
HgaI GACGC 1 cut(s) 1344
HhaI GCGC 3 cut(s) 1288, 1612, 1834
Hin6I GCGC 3 cut(s) 1286, 1610, 1832
HinP1I GCGC 3 cut(s) 1286, 1610, 1832
HpaII CCGG 2 cut(s) 524, 2193
Hpy166II GTNNAC 4 cut(s) 160, 501, 911, 2338
Hpy8I GTNNAC 4 cut(s) 160, 501, 911, 2338
Hpy99I CGWCG 1 cut(s) 1087
HpyCH4III ACNGT 9 cut(s) 148, 164, 498, 703, 844, 1279, 1861, 2210, 2281
HpyCH4IV ACGT 1 cut(s) 797
HpyF10VI GCNNNNNNNGC 8 cut(s) 29, 98, 317, 812, 1292, 1410, 1990, 2110
HpySE526I ACGT 1 cut(s) 797
HspAI GCGC 3 cut(s) 1286, 1610, 1832
LguI GCTCTTC 1 cut(s) 2314
LmnI GCTCC 6 cut(s) 77, 712, 731, 830, 1010, 1753
Lsp1109I GCAGC 7 cut(s) 179, 261, 802, 1406, 1422, 1557, 2125
LweI GCATC 2 cut(s) 623, 640
MabI ACCWGGT 1 cut(s) 2340
MaeI CTAG 9 cut(s) 297, 504, 638, 906, 1031, 1227, 1353, 2408, 2413
MaeII ACGT 1 cut(s) 797
MaeIII GTNAC 5 cut(s) 492, 1626, 1846, 2139, 2281
MboII GAAGA 9 cut(s) 206, 714, 759, 1246, 1391, 1853, 2331, 2359, 2381
MflI RGATCY 1 cut(s) 1247
MhlI GDGCHC 5 cut(s) 1015, 1724, 1910, 1948, 2326
MluCI AATT 6 cut(s) 141, 642, 686, 967, 1313, 1359
MlyI GAGTC 3 cut(s) 102, 911, 967
MmeI TCCRAC 1 cut(s) 850
Mph1103I ATGCAT 2 cut(s) 1098, 1702
MroXI GAANNNNTTC 3 cut(s) 370, 686, 763
MseI TTAA 8 cut(s) 72, 140, 302, 324, 444, 1458, 1641, 1731
MspA1I CMGCKG 1 cut(s) 2108
MspI CCGG 2 cut(s) 524, 2193
MspR9I CCNGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
Mva1269I GAATGC 2 cut(s) 210, 1993
MvaI CCWGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
MwoI GCNNNNNNNGC 8 cut(s) 29, 98, 317, 812, 1292, 1410, 1990, 2110
NcoI CCATGG 4 cut(s) 1419, 1446, 1500, 1527
NmuCI GTSAC 3 cut(s) 492, 2139, 2281
NsiI ATGCAT 2 cut(s) 1098, 1702
NspI RCATGY 3 cut(s) 1687, 1704, 1815
PaeI GCATGC 1 cut(s) 1687
PagI TCATGA 1 cut(s) 1870
PciSI GCTCTTC 1 cut(s) 2314
PctI GAATGC 2 cut(s) 210, 1993
PdmI GAANNNNTTC 3 cut(s) 370, 686, 763
PfeI GAWTC 8 cut(s) 55, 511, 671, 682, 926, 1022, 2173, 2222
PflMI CCANNNNNTGG 1 cut(s) 1679
PinAI ACCGGT 1 cut(s) 2192
PkrI GCNGC 7 cut(s) 169, 276, 817, 1396, 1412, 1547, 2115
PleI GAGTC 3 cut(s) 102, 910, 967
PpsI GAGTC 3 cut(s) 102, 910, 967
PpuMI RGGWCCY 1 cut(s) 1187
PshBI ATTAAT 1 cut(s) 140
Psp124BI GAGCTC 3 cut(s) 1015, 1910, 2326
Psp5II RGGWCCY 1 cut(s) 1187
Psp6I CCWGG 6 cut(s) 361, 1073, 1723, 1745, 1940, 2340
PspGI CCWGG 6 cut(s) 361, 1073, 1723, 1745, 1940, 2340
PspOMI GGGCCC 1 cut(s) 1944
PspPI GGNCC 4 cut(s) 455, 1187, 1944, 1945
PspPPI RGGWCCY 1 cut(s) 1187
PsrI GAACNNNNNNTAC 2 cut(s) 141, 173
PstI CTGCAG 1 cut(s) 2221
PsuI RGATCY 1 cut(s) 1247
PvuII CAGCTG 1 cut(s) 2108
RsaI GTAC 5 cut(s) 409, 534, 593, 667, 1598
RsaNI GTAC 5 cut(s) 408, 533, 592, 666, 1597
SacI GAGCTC 3 cut(s) 1015, 1910, 2326
SapI GCTCTTC 1 cut(s) 2314
SaqAI TTAA 8 cut(s) 72, 140, 302, 324, 444, 1458, 1641, 1731
SatI GCNGC 7 cut(s) 168, 275, 816, 1395, 1411, 1546, 2114
Sau96I GGNCC 4 cut(s) 455, 1187, 1944, 1945
SchI GAGTC 3 cut(s) 102, 911, 967
ScrFI CCNGG 6 cut(s) 363, 1075, 1725, 1747, 1942, 2342
SduI GDGCHC 5 cut(s) 1015, 1724, 1910, 1948, 2326
SexAI ACCWGGT 1 cut(s) 2340
SfaNI GCATC 2 cut(s) 623, 640
SfcI CTRYAG 1 cut(s) 2217
SinI GGWCC 2 cut(s) 455, 1187
SmlI CTYRAG 2 cut(s) 436, 1014
SmoI CTYRAG 2 cut(s) 436, 1014
SpeI ACTAGT 3 cut(s) 296, 503, 1352
SphI GCATGC 1 cut(s) 1687
Sse9I AATT 6 cut(s) 141, 642, 686, 967, 1313, 1359
SsiI CCGC 3 cut(s) 311, 806, 1253
SspI AATATT 1 cut(s) 464
SspMI CTAG 9 cut(s) 297, 504, 638, 906, 1031, 1227, 1353, 2408, 2413
SstI GAGCTC 3 cut(s) 1015, 1910, 2326
StyD4I CCNGG 6 cut(s) 361, 1073, 1723, 1745, 1940, 2340
StyI CCWWGG 6 cut(s) 637, 1419, 1446, 1500, 1527, 1771
TaaI ACNGT 9 cut(s) 148, 164, 498, 703, 844, 1279, 1861, 2210, 2281
TaiI ACGT 1 cut(s) 800
TaqI TCGA 5 cut(s) 136, 971, 1085, 1425, 2229
TasI AATT 6 cut(s) 141, 642, 686, 967, 1313, 1359
TatI WGTACW 1 cut(s) 532
TfiI GAWTC 8 cut(s) 55, 511, 671, 682, 926, 1022, 2173, 2222
Tru1I TTAA 8 cut(s) 72, 140, 302, 324, 444, 1458, 1641, 1731
Tru9I TTAA 8 cut(s) 72, 140, 302, 324, 444, 1458, 1641, 1731
TscAI CASTG 6 cut(s) 99, 167, 475, 708, 1843, 2284
TseFI GTSAC 3 cut(s) 492, 2139, 2281
TseI GCWGC 7 cut(s) 167, 274, 815, 1394, 1410, 1545, 2113
Tsp45I GTSAC 3 cut(s) 492, 2139, 2281
TspDTI ATGAA 3 cut(s) 272, 770, 1887
TspGWI ACGGA 3 cut(s) 928, 1378, 1865
TspRI CASTG 6 cut(s) 99, 167, 475, 708, 1843, 2284
Van91I CCANNNNNTGG 1 cut(s) 1679
VpaK11BI GGWCC 2 cut(s) 455, 1187
VspI ATTAAT 1 cut(s) 140
XapI RAATTY 2 cut(s) 642, 967
XbaI TCTAGA 1 cut(s) 1030
XceI RCATGY 3 cut(s) 1687, 1704, 1815
XmaJI CCTAGG 1 cut(s) 637
XmiI GTMKAC 2 cut(s) 500, 910
XmnI GAANNNNTTC 3 cut(s) 370, 686, 763
XspI CTAG 9 cut(s) 297, 504, 638, 906, 1031, 1227, 1353, 2408, 2413
Zsp2I ATGCAT 2 cut(s) 1098, 1702
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.