Prupe.6G333800_v2.0.a1

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0000587
Physical Location & Seq
Reverse (-)
29006320 .. 29009667
3348 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G333800.1

Sequence Viewer

Length: 3216 bp
ATGGAGTGCAACAAAGAGGAGGCAGTCAGGGCAATGCAACTTTCTGAGATAAAGATACAAAGCAATGATTTTACAGGAGCAAGAAAGATGGCACAAAAGGCACAACGACTCTTCCCTGAGCTTGAGAACATTGAGAAGTTACTCACTGTCTGTGAAGTTCACTGTTCATCAGAAAACAAAATAGGTGGATCTGAAATGGACTGGTATGGAATTCTTCAGATTCAAAAATTTGATAATGATGCAACCATCAAAAAACAATACAGGAAGCTTGCGCTGTTACTTCATCCTGATAAAAATAAGTTTTCTGGTGCGGAGGCTGCTTTTAAGCTGATCGGGGAAGCAAACAGGGTGCTGGCGGACCAAGCGAAACGCTCTGTGTATGACATGAAGTGTAGAGCTCTAGCAAAAACTGGTGCACCAAAACCATCAGCTCATCCATCAAACGGAAACTTATTTGTCAGGAAACATAACAATACTGCAAGCAATATTCAGAGTAGTCCTCAGTCACAGTACACTAGCATGAATCAACATCAACAGGTGCAACCAGAAACATTCTGGACATGTTGTCCTTTTTGTAAGATAAAATACCAATACCACCAAGACTTTGCAAACCGATTGTTACGCTGTCAAAAATGCCGAAGAGCCTTTGTTGCTCATGATTTGGGTATTCAATTTCAGGTGCATCCAGAATCTGTCAGCAATGAATTTCCGAATCGAAAAGAGCCTCCAAGTCAGGGTGCTTCTAATGTAGCCTCACAAAGTAATGGTGGAACTGGAAACCCATCCTTCACAAAATATCAAAATGGAAATGCAGCCTCAAATCCATTGTCAAAGACGGGATTTTCTGCTGATGTCAGTATGGATTCTAACAGTGAAAAGAAAGATATTGGGCATGGGGTTGGAATGTCCAAGTCTGGTCCAGTGAAGCCCAAGGATTCAGAAATTTCAAGAAATAAGAACAAAAAAAGAGGAAGGAAGTCCATTTTTGAATCCAATGAAAGCTGCAAGACTGGAAACAGAGCTACATCTGATTCTGAACATGTTATTATTCAAGAGAAGGTCAGTAAGCTATCTGAACCCAATGGAGGCAATCACAATAGGAGATCTTCGAGGAAAAAGCAGAATCTTTCTTATAATGAAAATCTAAATGATGATGATTTTGTGAGTCCTCCCAAGAGGTGGAGGGACAGCCAATTGTCCAGTGGGGTATCTAAGACTGATGGCTCAACTGATTCTGCTACTACTCCTTCTGTGGGTGGACATAAGAATGAGGCAGAACAAAACGTGACTGCCCCTTTAGAAGAATGTTCGCCCAGCAAGAGAAGCAAACCTGGTGAATTTGAGAAAAATGTCAAGGAAGCAGCTATGCCAGATAATGATGACGTGAGCGTTGAGGTTCCTGATCCTGAATTTAATAAATTTGGGCTTGGCGAGGATATGTTGGAAAATGTTTTTAGTGCTAATCAGACATGGGCTCTTTATGATCCAGTAGATGGCATGCCAAGATTCTATGCTCGTGTCAAAAAGGTATTCACACCTGGATTTAAGGTGAGATTCACCTGGCTGGAGTCCAATCCAGATGACCAAGGTGAGATTGCTTGGTGTAACAAGGAGTTGCCAGTTGCTTGTGGCAGTGGCAGAAGCTCTTTTTTTGTATATCCTAGGAAGGGAGAAACCTGGGCCCTGTACCAGAATTGGGATATTGGATGGAGTTCTGAGCCTGAAAAGCATGTACCATACAAATTTGAATTTGTGGAAGTCGTGTCAGATTTTGATGAAAATAATGGTGTTGGAGTTGCTTATCTAGGCAAAGTAAAAGGATTTGTCAGTCTGTTTCAGCGAAGTGAGCAGCATGGGGTTATCTTGTTTCAAGTACCACGTAATGAGCTATTCAGATTTTCTCATCGAATTCCATCGTTCAAGATGACTGGTGATGAAAGAGATGGTGTTCCGAAAGAATCCTTTGAGTTTGACCCTGCTTCTTTGCCCACCAATCTTGATGATTTCATTGACTTGAAAAAGGATAACAGAGCCATGAATACTGAACCTAATGGTTTGTCCCGTGAGTTCCTAGAAAGTGAAGGCAAACCTGTTATGGGTTCTGGGAGAGTATGCGCAGCTGAGAAACAGGAGAATTCTGAAAGAGAGACTTCAATGCGTAGATCTCCAAGAAAGGCAAATAGCCAGTCTGCTAGTTCTGTTAAACTAGAAGCGACTCGATGTGACTTTACTCAACCCACAGGAAGTGCTTCTGCATGTCAGGCTACTGATGAAATTATCAAAACACCAAAGAAACATCTGAAAAATGATTCTGATAGAGAGACTTTCAGGCTTAGAAGATCACCAAGGGATTTAAGTAAGAACAGTACCAGAGCAAATGTAACTATGAAGCGCCCAGATTCCACCAACAATGAAAGCCATCCCAACTTCACACCGTCCAAAATAAACTCTACTTCTAGTCAGTCAGATGACAGAAAGCGTTCAAGTGTGAAGGATCTTCCTTCTGTCAGTTCCATGAAAAGCCCTGTTACCCCTCCATCTTCATCTCCTGCCTGTAGATTATCGCAGACTCAGTTCTATGACTTTGATGGGCAAAAATCTGAGGAGAAATTTCAGCTTGGTCAAATATGGGCATTGTATAGTGAGAGGAGTGGGATGCCTAAGACTTACGCTCAAATTAAGAGGATTGAGTCTAAGCCAAATTTTCAATTGCATATGGCACTGCTTGAACCTTGCTTGGAACCGGAAGGCATGAGTGAACCAGTTTGTTGTGGGACATTTAAAGTCAAAGGTGGTCAAACCAAGGTCTTCCCGCGCACCTCATTTTCTCATTGTTTGAAAGCCAAACCTGTTGGTAAGAAGAATTTTGAAATAAACCCCAGGAAAGGTGAAGTTTGGGCACTATACAAGAACCACAACCCTGAGTTGGGCTTTGCTAACCTGGGGAAGGGTGAAAGTGAGATAGTAGAAGTCCTGGACGATAATGACCAGAGCACAAAGGTTGTGGTTCTGGCAAAGCTTAATGGATATAAATCAGTATATAGGGCTCCGAGAATCCACAGATTGAAAACTGGTGTGATTGACATACCACAGGCGGAGATTGGTAGATTCTCTCACCAAATTCTGGCTTTTCAGCATACCATGGAGAGTGACAGTCGACTTGCAGGCTATTGGGAGCTTGATCCGTTATCAATTCCTGGTAAATTAGAATTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

1072

Amino Acids

120.07

Weight (kDa)

8.88

Isoelectric Point (pI)

48.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1134
Acc16I TGCGCA 1 cut(s) 2116
AccB7I CCANNNNNTGG 3 cut(s) 1179, 1493, 3124
AccI GTMKAC 1 cut(s) 3157
AccII CGCG 1 cut(s) 2815
AciI CCGC 4 cut(s) 311, 356, 2813, 3095
AclWI GGATC 5 cut(s) 196, 1397, 1478, 2502, 3176
AcuI CTGAAG 1 cut(s) 200
AfaI GTAC 5 cut(s) 512, 1688, 1734, 1875, 2368
AflIII ACRYGT 2 cut(s) 560, 1039
AhdI GACNNNNNGTC 1 cut(s) 564
AjiI CACGTC 1 cut(s) 1384
AjnI CCWGG 8 cut(s) 1330, 1537, 1559, 1676, 2879, 2940, 2973, 3196
Alw21I GWGCWC 3 cut(s) 400, 418, 2996
Alw26I GTCTC 2 cut(s) 2141, 2315
Alw44I GTGCAC 1 cut(s) 414
AlwI GGATC 5 cut(s) 196, 1397, 1478, 2502, 3176
AlwNI CAGNNNCTG 1 cut(s) 692
AoxI GGCC 1 cut(s) 1680
ApaI GGGCCC 1 cut(s) 1684
ApaLI GTGCAC 1 cut(s) 414
ApeKI GCWGC 6 cut(s) 317, 812, 1002, 1361, 1849, 2117
ArsI GACNNNNNNTTYG 4 cut(s) 812, 844, 2171, 2203
Asp700I GAANNNNTTC 2 cut(s) 2248, 2479
AspA2I CCTAGG 1 cut(s) 1661
AspLEI GCGC 4 cut(s) 274, 2117, 2394, 2817
AspS9I GGNCC 4 cut(s) 358, 917, 1680, 1681
AsuHPI GGTGA 9 cut(s) 1346, 1549, 1561, 1601, 1943, 2334, 2900, 2963, 3107
AvaII GGWCC 2 cut(s) 358, 917
AvrII CCTAGG 1 cut(s) 1661
BaeGI GKGCMC 3 cut(s) 418, 1684, 2902
BanII GRGCYC 4 cut(s) 400, 1477, 1684, 3049
BauI CACGAG 1 cut(s) 1515
BbsI GAAGAC 1 cut(s) 2800
Bbv12I GWGCWC 3 cut(s) 400, 418, 2996
BbvI GCAGC 6 cut(s) 304, 824, 989, 1373, 1861, 2129
BciT130I CCWGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
BcoDI GTCTC 2 cut(s) 2141, 2315
BfaI CTAG 8 cut(s) 401, 516, 1662, 1805, 2072, 2193, 2207, 2457
BfmI CTRYAG 1 cut(s) 2554
BfoI RGCGCY 1 cut(s) 2395
BglII AGATCT 2 cut(s) 1103, 2162
BisI GCNGC 6 cut(s) 318, 813, 1003, 1362, 1850, 2118
BlnI CCTAGG 1 cut(s) 1661
BlsI GCNGC 6 cut(s) 319, 814, 1004, 1363, 1851, 2119
Bme1390I CCNGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
Bme18I GGWCC 2 cut(s) 358, 917
BmeRI GACNNNNNGTC 1 cut(s) 564
BmgBI CACGTC 1 cut(s) 1384
BmgT120I GGNCC 4 cut(s) 358, 917, 1680, 1681
BmiI GGNNCC 4 cut(s) 1398, 1682, 2742, 3048
BmrFI CCNGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
BmsI GCATC 3 cut(s) 229, 691, 2646
BpiI GAAGAC 1 cut(s) 2800
BplI GAGNNNNNCTC 2 cut(s) 484, 516
BpmI CTGGAG 1 cut(s) 1586
Bpu10I CCTNAGC 1 cut(s) 117
BpuEI CTTGAG 1 cut(s) 143
BsaAI YACGTR 1 cut(s) 1880
BsaBI GATNNNNATC 1 cut(s) 3031
BsaJI CCNNGG 9 cut(s) 930, 1585, 1661, 1677, 2345, 2802, 2879, 2941, 3141
BsaWI WCCGGW 1 cut(s) 2743
Bse3DI GCAATG 3 cut(s) 39, 70, 706
Bse8I GATNNNNATC 1 cut(s) 3031
BseBI CCWGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
BseDI CCNNGG 9 cut(s) 930, 1585, 1661, 1677, 2345, 2802, 2879, 2941, 3141
BseGI GGATG 7 cut(s) 283, 433, 682, 782, 1712, 2419, 2661
BseJI GATNNNNATC 1 cut(s) 3031
BseMI GCAATG 3 cut(s) 39, 70, 706
BseMII CTCAG 8 cut(s) 36, 108, 515, 1707, 2112, 2585, 2592, 2913
BseRI GAGGAG 3 cut(s) 32, 2618, 2662
BseSI GKGCMC 3 cut(s) 418, 1684, 2902
BseXI GCAGC 6 cut(s) 304, 824, 989, 1373, 1861, 2129
BseYI CCCAGC 1 cut(s) 1313
Bsh1236I CGCG 1 cut(s) 2815
BshFI GGCC 1 cut(s) 1682
BsiHKAI GWGCWC 3 cut(s) 400, 418, 2996
BsiSI CCGG 1 cut(s) 2744
BslFI GGGAC 3 cut(s) 1199, 2044, 2788
BsmAI GTCTC 2 cut(s) 2141, 2315
BsmFI GGGAC 3 cut(s) 1199, 2044, 2788
BsnI GGCC 1 cut(s) 1682
Bsp120I GGGCCC 1 cut(s) 1680
Bsp1286I GDGCHC 7 cut(s) 400, 418, 1477, 1684, 2902, 2996, 3049
Bsp143I GATC 9 cut(s) 188, 330, 1103, 1402, 1483, 2162, 2339, 2494, 3181
Bsp19I CCATGG 1 cut(s) 3141
BspACI CCGC 4 cut(s) 311, 356, 2813, 3095
BspANI GGCC 1 cut(s) 1682
BspCNI CTCAG 8 cut(s) 37, 109, 514, 1708, 2113, 2584, 2593, 2914
BspFNI CGCG 1 cut(s) 2815
BspHI TCATGA 1 cut(s) 655
BspLI GGNNCC 4 cut(s) 1398, 1682, 2742, 3048
BspPI GGATC 5 cut(s) 196, 1397, 1478, 2502, 3176
BspQI GCTCTTC 1 cut(s) 634
BsrDI GCAATG 3 cut(s) 39, 70, 706
BssECI CCNNGG 9 cut(s) 930, 1585, 1661, 1677, 2345, 2802, 2879, 2941, 3141
BssMI GATC 9 cut(s) 188, 330, 1103, 1402, 1483, 2162, 2339, 2494, 3181
BssSI CACGAG 1 cut(s) 1515
BssT1I CCWWGG 6 cut(s) 930, 1585, 1661, 2345, 2802, 3141
Bst2BI CACGAG 1 cut(s) 1515
Bst2UI CCWGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
Bst4CI ACNGT 7 cut(s) 148, 164, 510, 872, 2366, 2436, 3155
Bst6I CTCTTC 2 cut(s) 116, 634
BstBAI YACGTR 1 cut(s) 1880
BstC8I GCNNGC 5 cut(s) 270, 354, 481, 1499, 3166
BstDSI CCRYGG 1 cut(s) 3141
BstENI CCTNNNNNAGG 1 cut(s) 2945
BstF5I GGATG 7 cut(s) 283, 433, 682, 782, 1712, 2419, 2661
BstFNI CGCG 1 cut(s) 2815
BstH2I RGCGCY 1 cut(s) 2395
BstHHI GCGC 4 cut(s) 274, 2117, 2394, 2817
BstKTI GATC 9 cut(s) 191, 333, 1106, 1405, 1486, 2165, 2342, 2497, 3184
BstMAI GTCTC 2 cut(s) 2141, 2315
BstMBI GATC 9 cut(s) 188, 330, 1103, 1402, 1483, 2162, 2339, 2494, 3181
BstMWI GCNNNNNNNGC 9 cut(s) 29, 98, 317, 362, 650, 1323, 1726, 1846, 2261
BstNI CCWGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
BstNSI RCATGY 5 cut(s) 564, 1043, 1501, 1733, 2259
BstSCI CCNGG 8 cut(s) 1330, 1537, 1559, 1676, 2879, 2940, 2973, 3196
BstSFI CTRYAG 1 cut(s) 2554
BstSLI GKGCMC 3 cut(s) 418, 1684, 2902
BstUI CGCG 1 cut(s) 2815
BstV1I GCAGC 6 cut(s) 304, 824, 989, 1373, 1861, 2129
BstV2I GAAGAC 1 cut(s) 2800
BstX2I RGATCY 4 cut(s) 188, 1103, 2162, 2494
BstYI RGATCY 4 cut(s) 188, 1103, 2162, 2494
BsuRI GGCC 1 cut(s) 1682
BtgI CCRYGG 1 cut(s) 3141
BtrI CACGTC 1 cut(s) 1384
BtsCI GGATG 7 cut(s) 283, 433, 682, 782, 1712, 2419, 2661
BtsI GCAGTG 2 cut(s) 1639, 2720
BtsIMutI CAGTG 7 cut(s) 144, 160, 877, 927, 1207, 1639, 2720
Cac8I GCNNGC 5 cut(s) 270, 354, 481, 1499, 3166
CaiI CAGNNNCTG 1 cut(s) 692
CciI TCATGA 1 cut(s) 655
CfoI GCGC 4 cut(s) 274, 2117, 2394, 2817
Cfr13I GGNCC 4 cut(s) 358, 917, 1680, 1681
CsiI ACCWGGT 1 cut(s) 1330
Csp6I GTAC 5 cut(s) 511, 1687, 1733, 1874, 2367
CspCI CAANNNNNGTGG 6 cut(s) 166, 201, 1978, 2013, 2985, 3020
CviQI GTAC 5 cut(s) 511, 1687, 1733, 1874, 2367
DpnI GATC 9 cut(s) 190, 332, 1105, 1404, 1485, 2164, 2341, 2496, 3183
DpnII GATC 9 cut(s) 188, 330, 1103, 1402, 1483, 2162, 2339, 2494, 3181
DraI TTTAAA 1 cut(s) 2782
DriI GACNNNNNGTC 1 cut(s) 564
Eam1104I CTCTTC 2 cut(s) 116, 634
Eam1105I GACNNNNNGTC 1 cut(s) 564
EarI CTCTTC 2 cut(s) 116, 634
EciI GGCGGA 2 cut(s) 371, 3110
Ecl136II GAGCTC 1 cut(s) 398
Eco130I CCWWGG 6 cut(s) 930, 1585, 1661, 2345, 2802, 3141
Eco24I GRGCYC 4 cut(s) 400, 1477, 1684, 3049
Eco47I GGWCC 2 cut(s) 358, 917
Eco53kI GAGCTC 1 cut(s) 398
Eco57I CTGAAG 1 cut(s) 200
EcoICRI GAGCTC 1 cut(s) 398
EcoNI CCTNNNNNAGG 1 cut(s) 2945
EcoO109I RGGNCCY 1 cut(s) 1681
EcoRI GAATTC 3 cut(s) 210, 1908, 2134
EcoRII CCWGG 8 cut(s) 1330, 1537, 1559, 1676, 2879, 2940, 2973, 3196
EcoT14I CCWWGG 6 cut(s) 930, 1585, 1661, 2345, 2802, 3141
EcoT38I GRGCYC 4 cut(s) 400, 1477, 1684, 3049
ErhI CCWWGG 6 cut(s) 930, 1585, 1661, 2345, 2802, 3141
FalI AAGNNNNNCTT 2 cut(s) 2134, 2166
FaqI GGGAC 3 cut(s) 1199, 2044, 2788
FauI CCCGC 1 cut(s) 2820
FauNDI CATATG 1 cut(s) 2715
FblI GTMKAC 1 cut(s) 3157
Fnu4HI GCNGC 6 cut(s) 318, 813, 1003, 1362, 1850, 2118
FokI GGATG 7 cut(s) 270, 420, 669, 769, 1719, 2406, 2668
FriOI GRGCYC 4 cut(s) 400, 1477, 1684, 3049
Fsp4HI GCNGC 6 cut(s) 318, 813, 1003, 1362, 1850, 2118
FspBI CTAG 8 cut(s) 401, 516, 1662, 1805, 2072, 2193, 2207, 2457
FspI TGCGCA 1 cut(s) 2116
GlaI GCGC 4 cut(s) 273, 2116, 2393, 2816
GluI GCNGC 6 cut(s) 318, 813, 1003, 1362, 1850, 2118
GsaI CCCAGC 1 cut(s) 1317
GsuI CTGGAG 1 cut(s) 1586
HaeII RGCGCY 1 cut(s) 2395
HaeIII GGCC 1 cut(s) 1682
HapII CCGG 1 cut(s) 2744
HhaI GCGC 4 cut(s) 274, 2117, 2394, 2817
Hin6I GCGC 4 cut(s) 272, 2115, 2392, 2815
HinP1I GCGC 4 cut(s) 272, 2115, 2392, 2815
HincII GTYRAC 1 cut(s) 3158
HindII GTYRAC 1 cut(s) 3158
HindIII AAGCTT 2 cut(s) 266, 3017
HpaII CCGG 1 cut(s) 2744
HphI GGTGA 9 cut(s) 1346, 1549, 1561, 1601, 1943, 2334, 2900, 2963, 3107
Hpy166II GTNNAC 6 cut(s) 160, 416, 513, 1259, 2759, 3158
Hpy8I GTNNAC 6 cut(s) 160, 416, 513, 1259, 2759, 3158
HpyCH4III ACNGT 7 cut(s) 148, 164, 510, 872, 2366, 2436, 3155
HpyCH4IV ACGT 3 cut(s) 1284, 1383, 1879
HpyF10VI GCNNNNNNNGC 9 cut(s) 29, 98, 317, 362, 650, 1323, 1726, 1846, 2261
HpySE526I ACGT 3 cut(s) 1284, 1383, 1879
HspAI GCGC 4 cut(s) 272, 2115, 2392, 2815
Kzo9I GATC 9 cut(s) 188, 330, 1103, 1402, 1483, 2162, 2339, 2494, 3181
LguI GCTCTTC 1 cut(s) 634
LmnI GCTCC 3 cut(s) 77, 3052, 3175
Lsp1109I GCAGC 6 cut(s) 304, 824, 989, 1373, 1861, 2129
LweI GCATC 3 cut(s) 229, 691, 2646
MabI ACCWGGT 1 cut(s) 1330
MaeI CTAG 8 cut(s) 401, 516, 1662, 1805, 2072, 2193, 2207, 2457
MaeII ACGT 3 cut(s) 1284, 1383, 1879
MalI GATC 9 cut(s) 190, 332, 1105, 1404, 1485, 2164, 2341, 2496, 3183
MboI GATC 9 cut(s) 188, 330, 1103, 1402, 1483, 2162, 2339, 2494, 3181
MfeI CAATTG 2 cut(s) 1193, 2708
MflI RGATCY 4 cut(s) 188, 1103, 2162, 2494
MhlI GDGCHC 7 cut(s) 400, 418, 1477, 1684, 2902, 2996, 3049
MlyI GAGTC 6 cut(s) 102, 1174, 1577, 2209, 2563, 2699
MmeI TCCRAC 3 cut(s) 880, 1422, 1771
MroXI GAANNNNTTC 2 cut(s) 2248, 2479
MseI TTAA 8 cut(s) 324, 1413, 1545, 2202, 2354, 2679, 2781, 3021
MslI CAYNNNNRTG 2 cut(s) 518, 1266
MspA1I CMGCKG 1 cut(s) 2120
MspI CCGG 1 cut(s) 2744
MspR9I CCNGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
MunI CAATTG 2 cut(s) 1193, 2708
MvaI CCWGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
MvnI CGCG 1 cut(s) 2815
MwoI GCNNNNNNNGC 9 cut(s) 29, 98, 317, 362, 650, 1323, 1726, 1846, 2261
NcoI CCATGG 1 cut(s) 3141
NdeI CATATG 1 cut(s) 2715
NdeII GATC 9 cut(s) 188, 330, 1103, 1402, 1483, 2162, 2339, 2494, 3181
NlaIV GGNNCC 4 cut(s) 1398, 1682, 2742, 3048
NmuCI GTSAC 4 cut(s) 504, 1285, 2222, 3149
NsbI TGCGCA 1 cut(s) 2116
NspI RCATGY 5 cut(s) 564, 1043, 1501, 1733, 2259
PaeI GCATGC 1 cut(s) 1501
PagI TCATGA 1 cut(s) 655
PciI ACATGT 2 cut(s) 560, 1039
PciSI GCTCTTC 1 cut(s) 634
PdmI GAANNNNTTC 2 cut(s) 2248, 2479
PflMI CCANNNNNTGG 3 cut(s) 1179, 1493, 3124
PfoI TCCNGGA 1 cut(s) 2973
PkrI GCNGC 6 cut(s) 319, 814, 1004, 1363, 1851, 2119
PleI GAGTC 6 cut(s) 102, 1173, 1576, 2209, 2563, 2698
PpsI GAGTC 6 cut(s) 102, 1173, 1576, 2209, 2563, 2698
Ppu21I YACGTR 1 cut(s) 1880
PscI ACATGT 2 cut(s) 560, 1039
PsiI TTATAA 1 cut(s) 1134
Psp124BI GAGCTC 1 cut(s) 400
Psp6I CCWGG 8 cut(s) 1330, 1537, 1559, 1676, 2879, 2940, 2973, 3196
PspFI CCCAGC 1 cut(s) 1313
PspGI CCWGG 8 cut(s) 1330, 1537, 1559, 1676, 2879, 2940, 2973, 3196
PspN4I GGNNCC 4 cut(s) 1398, 1682, 2742, 3048
PspOMI GGGCCC 1 cut(s) 1680
PspPI GGNCC 4 cut(s) 358, 917, 1680, 1681
PstNI CAGNNNCTG 1 cut(s) 692
PsuI RGATCY 4 cut(s) 188, 1103, 2162, 2494
PvuII CAGCTG 1 cut(s) 2120
RsaI GTAC 5 cut(s) 512, 1688, 1734, 1875, 2368
RsaNI GTAC 5 cut(s) 511, 1687, 1733, 1874, 2367
RseI CAYNNNNRTG 2 cut(s) 518, 1266
SacI GAGCTC 1 cut(s) 400
SalI GTCGAC 1 cut(s) 3156
SapI GCTCTTC 1 cut(s) 634
SaqAI TTAA 8 cut(s) 324, 1413, 1545, 2202, 2354, 2679, 2781, 3021
SatI GCNGC 6 cut(s) 318, 813, 1003, 1362, 1850, 2118
Sau3AI GATC 9 cut(s) 188, 330, 1103, 1402, 1483, 2162, 2339, 2494, 3181
Sau96I GGNCC 4 cut(s) 358, 917, 1680, 1681
SchI GAGTC 6 cut(s) 102, 1174, 1577, 2209, 2563, 2699
ScrFI CCNGG 8 cut(s) 1332, 1539, 1561, 1678, 2881, 2942, 2975, 3198
SduI GDGCHC 7 cut(s) 400, 418, 1477, 1684, 2902, 2996, 3049
SexAI ACCWGGT 1 cut(s) 1330
SfaNI GCATC 3 cut(s) 229, 691, 2646
SfcI CTRYAG 1 cut(s) 2554
SinI GGWCC 2 cut(s) 358, 917
SmiMI CAYNNNNRTG 2 cut(s) 518, 1266
SmlI CTYRAG 1 cut(s) 122
SmoI CTYRAG 1 cut(s) 122
SphI GCATGC 1 cut(s) 1501
SsiI CCGC 4 cut(s) 311, 356, 2813, 3095
SspI AATATT 1 cut(s) 487
SspMI CTAG 8 cut(s) 401, 516, 1662, 1805, 2072, 2193, 2207, 2457
SstI GAGCTC 1 cut(s) 400
StyD4I CCNGG 8 cut(s) 1330, 1537, 1559, 1676, 2879, 2940, 2973, 3196
StyI CCWWGG 6 cut(s) 930, 1585, 1661, 2345, 2802, 3141
TaaI ACNGT 7 cut(s) 148, 164, 510, 872, 2366, 2436, 3155
TaiI ACGT 3 cut(s) 1287, 1386, 1882
TaqI TCGA 5 cut(s) 715, 1109, 1906, 2218, 3157
TatI WGTACW 1 cut(s) 510
Tru1I TTAA 8 cut(s) 324, 1413, 1545, 2202, 2354, 2679, 2781, 3021
Tru9I TTAA 8 cut(s) 324, 1413, 1545, 2202, 2354, 2679, 2781, 3021
TscAI CASTG 7 cut(s) 151, 167, 877, 927, 1207, 1639, 2727
TseFI GTSAC 4 cut(s) 504, 1285, 2222, 3149
TseI GCWGC 6 cut(s) 317, 812, 1002, 1361, 1849, 2117
Tsp45I GTSAC 4 cut(s) 504, 1285, 2222, 3149
TspGWI ACGGA 2 cut(s) 459, 3174
TspRI CASTG 7 cut(s) 151, 167, 877, 927, 1207, 1639, 2727
Van91I CCANNNNNTGG 3 cut(s) 1179, 1493, 3124
VneI GTGCAC 1 cut(s) 414
VpaK11BI GGWCC 2 cut(s) 358, 917
XagI CCTNNNNNAGG 1 cut(s) 2945
XceI RCATGY 5 cut(s) 564, 1043, 1501, 1733, 2259
XcmI CCANNNNNNNNNTGG 2 cut(s) 552, 1199
XmaJI CCTAGG 1 cut(s) 1661
XmiI GTMKAC 1 cut(s) 3157
XmnI GAANNNNTTC 2 cut(s) 2248, 2479
XspI CTAG 8 cut(s) 401, 516, 1662, 1805, 2072, 2193, 2207, 2457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.