Rorug04G0390000

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000587
Physical Location & Seq
Reverse (-)
55809232 .. 55810836
1605 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0390000.1

Sequence Viewer

Length: 1605 bp
ATGTCATATAGTAGCAGCAGTACTAGATGCCTCCAACTGTTGGAGAAGTGCAAGAACCTAAAGCACCTCCACCAAGCTCATGCCCAAGTATTCACTTGTGGCCTTGCCCATAACACCTTTGCCTTAAGCAGACTCTTAGCCTTCTGCTCAGACCCACATCATGGAAGCCTCTCCTATGCCTCAAAACTCTTCCAACACATTCCCCAACCCACCCTTTGCATCTACAACACAATGTTAAAAGCTCTCCTGCTCAGAAATGAACTCACCCAAACCCTAAATGTGTTCACCCAGATGTTACAAAATGGGACCTACCCTGACAATTATACCCTCCCTTATGTTCTAAAGGCCTCTGCCAGGCTTCAAAGCTATACTCTTGGCGAGTTGGTTCATGGGTTTAGCTTGAAATTGGGTTTTGAGTCTGATATCTATGTGGGCAACTCTCTGATTGTTATGTACTGTGCATTTGATGATATGAAAGGTGCACGCTACGTGTTCGACGAAATGCCTAGGCTAAGTGCTGTGTCATGGACGGTCATGATTTCTGGGTATGCAAAGGTGGGTGATGTGGACACTGCTAGAGTGTTCTTTGATGAGGCTCCTGTGAGAGATAGAGGAATATGGGGTGCCATGATTTCTGGGTATGTGCAAAACAATTGCTTTAAAGAAGGTCTGTATTTGTTCCGGTTGATGCAGGTTGCTGATGTAGAGCCTGATGAGGCTGTTTTTGTTAGTGTTCTATGTGCTTGTGCTCATTTGGGAGATTTGGATATTGGGATTTGGATTCACTCGTATTTGAATCGGCTCGGGTTGCCATCGAGTGTTAGACTCGGCACTGGTCTTATTGACATGTATGCGAAATGTGGGAAATTGGACTTAGCTAGAGGAGTGTTTTATGAGATGCCGCAGAGGGATACGGTTTGCTGGAATGCTATGATATCAGGAATGGCAATGCATGGGGATGGAGAAGGTGCACTCGAGCTGTTTAGAGAGATGGAGGCAGCTCAGGTCAGGCCGGATGATATCACCTTCATTGCTGTGTTTACTGCTTGTAGTTATGCAGGAATGGCATATGAAGGCATGAGGGTGTTGGATAAAATGTGTAATGTATACAATATTAGGCCGAAAAGTGAACACTATGGCTGCATTGTTGACCTTCTAAGTCGTGCTGGTCTCTTTGAAGAAGCAAGGGAAATAATCGAAAGAATACCCAGTTCAAGTAACCCTTCTGAAGAAGCAGTAGCTTGGAGAGCTTTTCTCAGCGCTTGTTGCAATCATGGACAGTCTCAACTAGCTGAGCTTGCTGCAGAGAAACTCTTTCAGCTAGAACGTCACAGTGGCGTGTATGTCTTGCTCTCAAATTTATATGCAGCTGCCGGAAAGCATGGTGATGCCAGGAGAATGAGAAGTTTGATGAGAAATATAGGAGTAGATAAGGCCCCGGGTTGCAGTTCGGTCGAGATTGATAAAGCTGTTTATGAATTCATTGCAGGGGAGAAAACACACCCTCACATGGAAGAAATTCAGTTAGTTTTGCAAACTATAATGAAGCAAATGGATTTTTCAGGCAGTGATTATCCATATTTGTTTCTGGTTAACAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

534

Amino Acids

59.76

Weight (kDa)

6.11

Isoelectric Point (pI)

35.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 70 - 116 1.5e-06 PPR repeat family
PPR_2 PF13041 303 - 350 1.8e-11 PPR repeat family
PPR PF01535 306 - 333 2.3e-07 PPR repeat
E_motif PF20431 427 - 486 4.6e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 682
AccB1I GGYRCC 1 cut(s) 623
AccB7I CCANNNNNTGG 2 cut(s) 40, 161
AccI GTMKAC 1 cut(s) 1107
AciI CCGC 1 cut(s) 902
AcsI RAATTY 3 cut(s) 1357, 1478, 1518
AcuI CTGAAG 1 cut(s) 1248
AfaI GTAC 2 cut(s) 22, 455
AfeI AGCGCT 1 cut(s) 1261
AfiI CCNNNNNNNGG 4 cut(s) 40, 161, 354, 1510
AflII CTTAAG 1 cut(s) 124
AflIII ACRYGT 2 cut(s) 489, 846
AgsI TTSAA 5 cut(s) 362, 403, 796, 1178, 1215
AjnI CCWGG 2 cut(s) 353, 1391
Alw21I GWGCWC 3 cut(s) 484, 751, 973
Alw26I GTCTC 2 cut(s) 1175, 1287
Alw44I GTGCAC 2 cut(s) 480, 969
Ama87I CYCGRG 3 cut(s) 803, 974, 1438
Aor51HI AGCGCT 1 cut(s) 1261
AoxI GGCC 5 cut(s) 100, 345, 1010, 1118, 1434
ApaLI GTGCAC 2 cut(s) 480, 969
ApeKI GCWGC 6 cut(s) 15, 998, 1140, 1301, 1367, 1370
ApoI RAATTY 3 cut(s) 1357, 1478, 1518
Asp700I GAANNNNTTC 1 cut(s) 1518
AspA2I CCTAGG 1 cut(s) 506
AspLEI GCGC 1 cut(s) 1262
AspS9I GGNCC 2 cut(s) 306, 1435
AsuC2I CCSGG 2 cut(s) 1439, 1440
AsuHPI GGTGA 5 cut(s) 256, 277, 572, 1015, 1397
AvaI CYCGRG 3 cut(s) 803, 974, 1438
AvaII GGWCC 1 cut(s) 306
AvrII CCTAGG 1 cut(s) 506
BaeGI GKGCMC 2 cut(s) 484, 973
BanI GGYRCC 1 cut(s) 623
Bbv12I GWGCWC 3 cut(s) 484, 751, 973
BbvI GCAGC 6 cut(s) 27, 1010, 1127, 1288, 1357, 1379
BccI CCATC 3 cut(s) 820, 953, 985
BcgI CGANNNNNNTGC 2 cut(s) 1435, 1469
BciT130I CCWGG 2 cut(s) 355, 1393
BciVI GTATCC 1 cut(s) 904
BcnI CCSGG 2 cut(s) 1439, 1440
BcoDI GTCTC 2 cut(s) 1175, 1287
BfaI CTAG 6 cut(s) 24, 507, 576, 879, 1289, 1322
BfmI CTRYAG 1 cut(s) 1302
BfoI RGCGCY 1 cut(s) 1263
BfrI CTTAAG 1 cut(s) 124
BfuAI ACCTGC 1 cut(s) 682
BfuI GTATCC 1 cut(s) 904
BisI GCNGC 7 cut(s) 16, 902, 999, 1141, 1302, 1368, 1371
BlnI CCTAGG 1 cut(s) 506
BlpI GCTNAGC 1 cut(s) 1293
BlsI GCNGC 7 cut(s) 17, 903, 1000, 1142, 1303, 1369, 1372
BmcAI AGTACT 1 cut(s) 22
Bme1390I CCNGG 4 cut(s) 355, 1393, 1439, 1440
Bme18I GGWCC 1 cut(s) 306
BmeT110I CYCGRG 3 cut(s) 803, 974, 1438
BmgT120I GGNCC 2 cut(s) 306, 1435
BmiI GGNNCC 4 cut(s) 307, 597, 625, 1437
BmrFI CCNGG 4 cut(s) 355, 1393, 1439, 1440
BmrI ACTGGG 1 cut(s) 1203
BmsI GCATC 5 cut(s) 17, 228, 678, 888, 1378
BmuI ACTGGG 1 cut(s) 1203
BplI GAGNNNNNCTC 2 cut(s) 1239, 1271
Bpu10I CCTNAGC 1 cut(s) 1002
Bpu1102I GCTNAGC 1 cut(s) 1293
BpuMI CCSGG 2 cut(s) 1439, 1440
BsaAI YACGTR 1 cut(s) 490
BsaI GGTCTC 1 cut(s) 1175
BsaJI CCNNGG 3 cut(s) 506, 1437, 1438
BsaWI WCCGGW 1 cut(s) 681
Bsc4I CCNNNNNNNGG 4 cut(s) 40, 161, 354, 1510
Bse1I ACTGG 2 cut(s) 838, 1209
Bse3DI GCAATG 3 cut(s) 954, 1029, 1482
BseBI CCWGG 2 cut(s) 355, 1393
BseDI CCNNGG 3 cut(s) 506, 1437, 1438
BseGI GGATG 2 cut(s) 964, 1021
BseLI CCNNNNNNNGG 4 cut(s) 40, 161, 354, 1510
BseMI GCAATG 3 cut(s) 954, 1029, 1482
BseMII CTCAG 5 cut(s) 162, 265, 1016, 1270, 1284
BseNI ACTGG 2 cut(s) 838, 1209
BseRI GAGGAG 1 cut(s) 897
BseSI GKGCMC 2 cut(s) 484, 973
BseXI GCAGC 6 cut(s) 27, 1010, 1127, 1288, 1357, 1379
Bsh1285I CGRYCG 1 cut(s) 1455
BshFI GGCC 5 cut(s) 102, 347, 1012, 1120, 1436
BshNI GGYRCC 1 cut(s) 623
BsiEI CGRYCG 1 cut(s) 1455
BsiHKAI GWGCWC 3 cut(s) 484, 751, 973
BsiHKCI CYCGRG 3 cut(s) 803, 974, 1438
BsiSI CCGG 4 cut(s) 682, 1013, 1374, 1439
BslFI GGGAC 1 cut(s) 319
BslI CCNNNNNNNGG 4 cut(s) 40, 161, 354, 1510
BsmAI GTCTC 2 cut(s) 1175, 1287
BsmFI GGGAC 1 cut(s) 319
BsmI GAATGC 1 cut(s) 931
BsnI GGCC 5 cut(s) 102, 347, 1012, 1120, 1436
Bso31I GGTCTC 1 cut(s) 1175
BsoBI CYCGRG 3 cut(s) 803, 974, 1438
Bsp1286I GDGCHC 3 cut(s) 484, 751, 973
Bsp1720I GCTNAGC 1 cut(s) 1293
BspACI CCGC 1 cut(s) 902
BspANI GGCC 5 cut(s) 102, 347, 1012, 1120, 1436
BspCNI CTCAG 5 cut(s) 161, 264, 1015, 1269, 1285
BspHI TCATGA 1 cut(s) 534
BspLI GGNNCC 4 cut(s) 307, 597, 625, 1437
BspMAI CTGCAG 1 cut(s) 1306
BspMI ACCTGC 1 cut(s) 682
BspT107I GGYRCC 1 cut(s) 623
BspTI CTTAAG 1 cut(s) 124
BspTNI GGTCTC 1 cut(s) 1175
BsrDI GCAATG 3 cut(s) 954, 1029, 1482
BsrI ACTGG 2 cut(s) 838, 1209
BssECI CCNNGG 3 cut(s) 506, 1437, 1438
BssNAI GTATAC 1 cut(s) 1108
BssT1I CCWWGG 1 cut(s) 506
Bst1107I GTATAC 1 cut(s) 1108
Bst2UI CCWGG 2 cut(s) 355, 1393
Bst4CI ACNGT 6 cut(s) 39, 458, 532, 916, 1281, 1334
Bst6I CTCTTC 1 cut(s) 194
BstAFI CTTAAG 1 cut(s) 124
BstBAI YACGTR 1 cut(s) 490
BstC8I GCNNGC 2 cut(s) 484, 1299
BstDEI CTNAG 9 cut(s) 136, 148, 251, 512, 874, 1002, 1157, 1256, 1293
BstENI CCTNNNNNAGG 1 cut(s) 352
BstF5I GGATG 2 cut(s) 964, 1021
BstH2I RGCGCY 1 cut(s) 1263
BstHHI GCGC 1 cut(s) 1262
BstMAI GTCTC 2 cut(s) 1175, 1287
BstMCI CGRYCG 1 cut(s) 1455
BstMWI GCNNNNNNNGC 5 cut(s) 808, 1064, 1247, 1266, 1298
BstNI CCWGG 2 cut(s) 355, 1393
BstNSI RCATGY 1 cut(s) 850
BstSCI CCNGG 4 cut(s) 353, 1391, 1437, 1438
BstSFI CTRYAG 1 cut(s) 1302
BstSLI GKGCMC 2 cut(s) 484, 973
BstV1I GCAGC 6 cut(s) 27, 1010, 1127, 1288, 1357, 1379
BstZ17I GTATAC 1 cut(s) 1108
BsuI GTATCC 1 cut(s) 904
BsuRI GGCC 5 cut(s) 102, 347, 1012, 1120, 1436
BtsCI GGATG 2 cut(s) 964, 1021
BtsI GCAGTG 2 cut(s) 570, 1573
BtsIMutI CAGTG 4 cut(s) 570, 831, 1339, 1573
BveI ACCTGC 1 cut(s) 682
Cac8I GCNNGC 2 cut(s) 484, 1299
CciI TCATGA 1 cut(s) 534
CfoI GCGC 1 cut(s) 1262
Cfr13I GGNCC 2 cut(s) 306, 1435
Cfr9I CCCGGG 1 cut(s) 1438
Csp6I GTAC 2 cut(s) 21, 454
CviQI GTAC 2 cut(s) 21, 454
DdeI CTNAG 9 cut(s) 136, 148, 251, 512, 874, 1002, 1157, 1256, 1293
DraI TTTAAA 1 cut(s) 661
Eam1104I CTCTTC 1 cut(s) 194
EarI CTCTTC 1 cut(s) 194
Eco130I CCWWGG 1 cut(s) 506
Eco147I AGGCCT 1 cut(s) 347
Eco31I GGTCTC 1 cut(s) 1175
Eco32I GATATC 3 cut(s) 424, 936, 1021
Eco47I GGWCC 1 cut(s) 306
Eco47III AGCGCT 1 cut(s) 1261
Eco57I CTGAAG 1 cut(s) 1248
Eco88I CYCGRG 3 cut(s) 803, 974, 1438
EcoNI CCTNNNNNAGG 1 cut(s) 352
EcoO109I RGGNCCY 2 cut(s) 306, 1435
EcoRI GAATTC 1 cut(s) 1478
EcoRII CCWGG 2 cut(s) 353, 1391
EcoRV GATATC 3 cut(s) 424, 936, 1021
EcoT14I CCWWGG 1 cut(s) 506
EcoT22I ATGCAT 1 cut(s) 954
ErhI CCWWGG 1 cut(s) 506
FalI AAGNNNNNCTT 2 cut(s) 1207, 1239
FaqI GGGAC 1 cut(s) 319
FauNDI CATATG 1 cut(s) 1069
FblI GTMKAC 1 cut(s) 1107
Fnu4HI GCNGC 7 cut(s) 16, 902, 999, 1141, 1302, 1368, 1371
FokI GGATG 2 cut(s) 971, 1028
Fsp4HI GCNGC 7 cut(s) 16, 902, 999, 1141, 1302, 1368, 1371
FspBI CTAG 6 cut(s) 24, 507, 576, 879, 1289, 1322
GlaI GCGC 1 cut(s) 1261
GluI GCNGC 7 cut(s) 16, 902, 999, 1141, 1302, 1368, 1371
HaeII RGCGCY 1 cut(s) 1263
HaeIII GGCC 5 cut(s) 102, 347, 1012, 1120, 1436
HapII CCGG 4 cut(s) 682, 1013, 1374, 1439
HhaI GCGC 1 cut(s) 1262
Hin6I GCGC 1 cut(s) 1260
HinP1I GCGC 1 cut(s) 1260
HincII GTYRAC 2 cut(s) 1150, 1594
HindII GTYRAC 2 cut(s) 1150, 1594
HinfI GANTC 5 cut(s) 132, 416, 781, 796, 825
HpaI GTTAAC 1 cut(s) 1594
HpaII CCGG 4 cut(s) 682, 1013, 1374, 1439
HphI GGTGA 5 cut(s) 256, 277, 572, 1015, 1397
Hpy166II GTNNAC 9 cut(s) 285, 482, 568, 971, 1041, 1108, 1130, 1150, 1594
Hpy188I TCNGA 5 cut(s) 151, 254, 421, 444, 1228
Hpy188III TCNNGA 3 cut(s) 535, 939, 1456
Hpy8I GTNNAC 9 cut(s) 285, 482, 568, 971, 1041, 1108, 1130, 1150, 1594
Hpy99I CGWCG 1 cut(s) 500
HpyAV CCTTC 7 cut(s) 151, 659, 959, 1036, 1067, 1163, 1233
HpyCH4III ACNGT 6 cut(s) 39, 458, 532, 916, 1281, 1334
HpyCH4IV ACGT 2 cut(s) 489, 1327
HpyF10VI GCNNNNNNNGC 5 cut(s) 808, 1064, 1247, 1266, 1298
HpyF3I CTNAG 9 cut(s) 136, 148, 251, 512, 874, 1002, 1157, 1256, 1293
HpySE526I ACGT 2 cut(s) 489, 1327
HspAI GCGC 1 cut(s) 1260
KspAI GTTAAC 1 cut(s) 1594
LmnI GCTCC 1 cut(s) 601
Lsp1109I GCAGC 6 cut(s) 27, 1010, 1127, 1288, 1357, 1379
LweI GCATC 5 cut(s) 17, 228, 678, 888, 1378
MaeI CTAG 6 cut(s) 24, 507, 576, 879, 1289, 1322
MaeII ACGT 2 cut(s) 489, 1327
MaeIII GTNAC 3 cut(s) 294, 1217, 1328
MboII GAAGA 4 cut(s) 181, 1190, 1241, 1526
MfeI CAATTG 1 cut(s) 652
MhlI GDGCHC 3 cut(s) 484, 751, 973
MluCI AATT 7 cut(s) 319, 404, 652, 866, 1357, 1478, 1518
MlyI GAGTC 3 cut(s) 126, 425, 819
MmeI TCCRAC 4 cut(s) 21, 58, 217, 1068
Mph1103I ATGCAT 1 cut(s) 954
MroXI GAANNNNTTC 1 cut(s) 1518
MseI TTAA 4 cut(s) 125, 236, 660, 1593
MslI CAYNNNNRTG 5 cut(s) 290, 957, 1034, 1082, 1386
MspA1I CMGCKG 1 cut(s) 1370
MspCI CTTAAG 1 cut(s) 124
MspI CCGG 4 cut(s) 682, 1013, 1374, 1439
MspR9I CCNGG 4 cut(s) 355, 1393, 1439, 1440
MunI CAATTG 1 cut(s) 652
Mva1269I GAATGC 1 cut(s) 931
MvaI CCWGG 2 cut(s) 355, 1393
MwoI GCNNNNNNNGC 5 cut(s) 808, 1064, 1247, 1266, 1298
NciI CCSGG 2 cut(s) 1439, 1440
NdeI CATATG 1 cut(s) 1069
NlaIV GGNNCC 4 cut(s) 307, 597, 625, 1437
NmeAIII GCCGAG 1 cut(s) 807
NmuCI GTSAC 1 cut(s) 1328
NsiI ATGCAT 1 cut(s) 954
NspI RCATGY 1 cut(s) 850
PaeR7I CTCGAG 1 cut(s) 974
PagI TCATGA 1 cut(s) 534
PceI AGGCCT 1 cut(s) 347
PciI ACATGT 1 cut(s) 846
PcsI WCGNNNNNNNCGW 1 cut(s) 495
PctI GAATGC 1 cut(s) 931
PdmI GAANNNNTTC 1 cut(s) 1518
PfeI GAWTC 2 cut(s) 781, 796
PflMI CCANNNNNTGG 2 cut(s) 40, 161
PkrI GCNGC 7 cut(s) 17, 903, 1000, 1142, 1303, 1369, 1372
PleI GAGTC 3 cut(s) 126, 424, 819
PpsI GAGTC 3 cut(s) 126, 424, 819
Ppu21I YACGTR 1 cut(s) 490
PpuMI RGGWCCY 1 cut(s) 306
PscI ACATGT 1 cut(s) 846
Psp5II RGGWCCY 1 cut(s) 306
Psp6I CCWGG 2 cut(s) 353, 1391
PspGI CCWGG 2 cut(s) 353, 1391
PspN4I GGNNCC 4 cut(s) 307, 597, 625, 1437
PspPI GGNCC 2 cut(s) 306, 1435
PspPPI RGGWCCY 1 cut(s) 306
PspXI VCTCGAGB 1 cut(s) 974
PstI CTGCAG 1 cut(s) 1306
PvuII CAGCTG 1 cut(s) 1370
RsaI GTAC 2 cut(s) 22, 455
RsaNI GTAC 2 cut(s) 21, 454
RseI CAYNNNNRTG 5 cut(s) 290, 957, 1034, 1082, 1386
SaqAI TTAA 4 cut(s) 125, 236, 660, 1593
SatI GCNGC 7 cut(s) 16, 902, 999, 1141, 1302, 1368, 1371
Sau96I GGNCC 2 cut(s) 306, 1435
ScaI AGTACT 1 cut(s) 22
SchI GAGTC 3 cut(s) 126, 425, 819
ScrFI CCNGG 4 cut(s) 355, 1393, 1439, 1440
SduI GDGCHC 3 cut(s) 484, 751, 973
SfaNI GCATC 5 cut(s) 17, 228, 678, 888, 1378
SfcI CTRYAG 1 cut(s) 1302
Sfr274I CTCGAG 1 cut(s) 974
SinI GGWCC 1 cut(s) 306
SlaI CTCGAG 1 cut(s) 974
SmaI CCCGGG 1 cut(s) 1440
SmiMI CAYNNNNRTG 5 cut(s) 290, 957, 1034, 1082, 1386
SmlI CTYRAG 2 cut(s) 124, 974
SmoI CTYRAG 2 cut(s) 124, 974
Sse9I AATT 7 cut(s) 319, 404, 652, 866, 1357, 1478, 1518
SseBI AGGCCT 1 cut(s) 347
SsiI CCGC 1 cut(s) 902
SspI AATATT 1 cut(s) 1114
SspMI CTAG 6 cut(s) 24, 507, 576, 879, 1289, 1322
StuI AGGCCT 1 cut(s) 347
StyD4I CCNGG 4 cut(s) 353, 1391, 1437, 1438
StyI CCWWGG 1 cut(s) 506
TaaI ACNGT 6 cut(s) 39, 458, 532, 916, 1281, 1334
TaiI ACGT 2 cut(s) 492, 1330
TaqI TCGA 5 cut(s) 495, 815, 975, 1197, 1455
TaqII GACCGA 1 cut(s) 1441
TasI AATT 7 cut(s) 319, 404, 652, 866, 1357, 1478, 1518
TatI WGTACW 2 cut(s) 20, 453
TauI GCSGC 1 cut(s) 904
TfiI GAWTC 2 cut(s) 781, 796
Tru1I TTAA 4 cut(s) 125, 236, 660, 1593
Tru9I TTAA 4 cut(s) 125, 236, 660, 1593
TscAI CASTG 4 cut(s) 577, 838, 1339, 1573
TseFI GTSAC 1 cut(s) 1328
TseI GCWGC 6 cut(s) 15, 998, 1140, 1301, 1367, 1370
Tsp45I GTSAC 1 cut(s) 1328
TspDTI ATGAA 8 cut(s) 273, 377, 488, 1018, 1086, 1471, 1491, 1559
TspMI CCCGGG 1 cut(s) 1438
TspRI CASTG 4 cut(s) 577, 838, 1339, 1573
Van91I CCANNNNNTGG 2 cut(s) 40, 161
Vha464I CTTAAG 1 cut(s) 124
VneI GTGCAC 2 cut(s) 480, 969
VpaK11BI GGWCC 1 cut(s) 306
XagI CCTNNNNNAGG 1 cut(s) 352
XapI RAATTY 3 cut(s) 1357, 1478, 1518
XceI RCATGY 1 cut(s) 850
XhoI CTCGAG 1 cut(s) 974
XmaI CCCGGG 1 cut(s) 1438
XmaJI CCTAGG 1 cut(s) 506
XmiI GTMKAC 1 cut(s) 1107
XmnI GAANNNNTTC 1 cut(s) 1518
XspI CTAG 6 cut(s) 24, 507, 576, 879, 1289, 1322
ZrmI AGTACT 1 cut(s) 22
Zsp2I ATGCAT 1 cut(s) 954
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.