RLG00000025529

Domain of unknown function (DUF3444)

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
Physical Location & Seq
Reverse (-)
46487432 .. 46491316
3885 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025529

Sequence Viewer

Length: 3297 bp
ATGGAGTGCAACAAAGAGGAGGCGGTCAGAGCAATGCAACTTTCAGAAATAAAGATGCAAAACAAAGATTATATAGGAGCAATGAAGATGGCACAAAAGGCTCAGAGACTCTTCCCTGATCTTGAAAACATTTCTCGGTTACTTACAGTATGTGAAGTTCACTGTACAGCAGAAAACAAGCTAGGTGGATCCGAAATGGATTGGTATGGAATTCTTCAGATTCAACAATTTGATAATGATGTCACCGTCAAGAAACAGTATAGAAAATTGGCACTTTTGCTTCATCCTGATAAGAATAAGTTTGCTGGTTCGGAGGCTGCTTTTAAGCTGATTGGGGAAGCAAACAGGGTGCTGTCGGACAAACAAAAACGTTCTATATATGACATTAAGTATAGAACTCTAGCAAGACCTGGTGGACCAAAAACAACAGCTCGTCAGTCAAATATTGATTTCTTTGCGGCAACCAATTCTCGGAATAATCCTCAGTCACCTGTGCAACCAAACACATTCTGGACACAGTGCTACTATTGTTTCTCAAAGTTTCAATACTATAGAGACTTTCTGGGTCGGTTGCTCCGTTGTCAAAGATGCCGGAAAGCATTTGAAGCTCATGAATTTCGGGAAGGTGTGCATCCAGAATCTTTCAGAAATGACTTTCCGAATCATAAAGAGCCGCCAAGTCAGGGTCCTTCAAACGTAGCCTCACAAAGTAATGGAGGAACTGAAAAAGGAAATGTCACAAGATTTCAGAATGGAGATGCAGCCTTCAAACCTGCGTCAAAGGTAGGAACTTCTGCTGACTTGAGTGGAGATTATGACGCTGAAAAGAAAGATATTTGGTGTGGGGTTGAAGTAGGGAAGCAAGGTGTTGAAACATCTAAATTTGGTCCAGTGAAGTCCAAAGATACAAGAACTTCTAGAAATATGAACAAAGAAAGAGAGAATTCAACTTTTGAATTTAGAGAAAGTTTGAAGACTGGAAATAGAGCTACAGCTGATACTGAACATGCTGCTAAAGAGAAGAATGATAGTGTTTCTGAACTCGGTGGAGGCCGTCACCCTAGGAGATCTCCAAGGAACAAGCATAATCTTTCATCCCTCCTAGATGACAAGGATGATGATGATTTTGTGAGTCCCCCATTCAAAAGGTTGAGGAAGGGCCAATTGTTTAGTGCTGCTGAGGAGGGAAATAATGCAACTGTTGGTGGACCTAAGAAAAATACAAGAGAAAAAGTAAGTTTTCCTCTAGAAGAAAATTTGCCAAAGAAGAAGAGTAAAACTGAGGAATTTGAGCTAACGGTAAAGGGAGCCGCCATGTCAGATCATGATGAAAACAACTTCAAAGATGATTTCAGTCCTATAGCTAATGTAGATGTTGCATCCACTCCGGGAGCCATTGAAGTTCCTGATCCTCAATTCCATAAGTTTGTGCTTGGTGAAGATAGTTTACCAAGTCTTTTTGAAGCCAATCAAATATGGGCTCTTTATGATCCAGCAGATGACATGCCCAGATACTATGCTTTTGTCAAGAAGGTCCTCACCCCTGGATTTAAGCTGAAAATCAGATGGCTGGAGGCCAATCCAGATGACCAAGGTGAGATTGATTGGTCCGAGAAGGAGTTGCCAGTTGCTTGTGGCAAGTTCAAACTTGGGAAAACTCAAGAAATTAAAGATCATCTTATGTTTTCTCATCAGATGCACTACAGAAAAGGAAGTGATAAAAAGTCTGTTCTGGTATATCCTAGGAAGGGAGAAACTTGGGCCATGTACCAGAATTGGGATATTGGATGGAGTTCTGAGCCGGAAAAACACATGCCCTACAGATATGAATTTGTTGAAGTCTTGTCTGATTTTGTCGAAGCTTTTGGAATTGGAGTTCGTTATTTAGGCAAAGTGAAAGGATTTGTCAGTTTATTTCAGCCAACTGAGCAGCACGGGGTTGTCATGTTTCAAGTACCACCTCATGAGCTATACAGATTTTCTCATCAGATTCCCTCTTTCAAGATGACTGGTTGTGAAGGATCTGGTGTTCCCCCAGGATCCTTTGAGCTTGATCCTGCTTCTTTGCCCACCAGTATTTTTGATTCAAGGGATCTAGGTAACTTGGAAATGGATGACAGAAGCAAGAAAACTGAAACTGATGGTACGTCTTGTGAAAGGATCGGTTCTGTGACTGCATGCACAGGCATGAAGCAGGAGAAGAAGCTTTCTGAAAGAGAGACTTTGATGTCTAGATCTCCAAGAGAGTCGGATACTGAATCTGTGAATTGTATGAAAGGGAAGCGCATGACAAACCTAAACCATGGAAACCTCACACAACCCGAGGCAAGTGCTATTCCATGTCAAGCAGATAAGAGAAACGACACACAGAAGAAGCATCAGAAGAACGATTCGGATAAAGAAAGTTTTAGTCTTAGAAGATCACCAAGGGAATTAAGCAAGAACAGTACCCCATCAAACGGAGCTATGAAGTGTCCAGATTCTGCCAAGGATGACAGCCATGTCAGCTTCCCTCAGTCTAAAGTAAACTCTACCTCTAGCCAGTATAATAACAGGATGCATTCAACTCTGAAGGATCACCATACTCCCAGTCTCATGAAAAACCCTGTAGCCCCTCCTCCATCTTCATCACCTGCCTGCAGATTGTCACAGACTGAATTCTACAACTTCAAAGGGCTAAAATCTCAGGAGAAATTTAGTCTTGGTCAAATTTGGGCTCTGTATAGTGACGGACATGGGATGCCTAATACTTATGCTCAAGTTAAGAGGATTGAGGTTAGGCCAAATTTTCAAGTGCATATGGCAGTGCTGGAACCTTGCTCAGAACCGGAAAATTTGTCTGGACCAGTTTCCTGTGGGACATTTAGATTGAAAAATTGCCCAACTGAGGTCTTCCCCCTCTCTTCATTTTCCCACTGCTTAAATACCAGAAATGTTGTTGGTAGGAAGGTGTTTGAAATACAACCCAAGGAAGGTGAGGTTTGGGCTCTATACAAGAACCACAATCCTGAGCCGACTTGTCCCAACCTGGCCAAGGGTGAATGTGAAATAGTGGAAGTGCGGGGAAATAGTGGAAGAAGCACGAAGGTTGGAGTTCTGGTAAAGGTTGAAGGATTTAAATCAATATTCAAGGCTCCAAGAATCCAGAGATCAAAAACTGGGATCATTGATGTACCGCGGTCTGAGTTTCATAGATTTTCTCACCAGATTCCTGCTTTCCAGCATAGCGGGGAGAGTGACAGTCGACTTGCAGGCTGTTGGGAGCTTGATCCATCATCAATACCTGGTACTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1099

Amino Acids

123.74

Weight (kDa)

8.69

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 67 - 128 3.6e-19 DnaJ domain
DUF3444 PF11926 465 - 672 1.3e-77 Domain of unknown function (DUF3444)
DUF3444 PF11926 881 - 1078 5.9e-49 Domain of unknown function (DUF3444)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2641
AasI GACNNNNNNGTC 2 cut(s) 2227, 2501
Acc36I ACCTGC 2 cut(s) 781, 2641
AccI GTMKAC 1 cut(s) 3244
AccII CGCG 1 cut(s) 3178
AciI CCGC 8 cut(s) 23, 458, 674, 1311, 3061, 3176, 3178, 3228
AclI AACGTT 1 cut(s) 370
AcoI YGGCCR 1 cut(s) 3030
AcuI CTGAAG 2 cut(s) 200, 2591
AfaI GTAC 7 cut(s) 166, 1769, 1956, 2146, 2449, 3174, 3289
AfiI CCNNNNNNNGG 8 cut(s) 471, 683, 1748, 1777, 2459, 2887, 2972, 3034
AjnI CCWGG 5 cut(s) 409, 1543, 2035, 3027, 3283
AloI GAACNNNNNNTCC 4 cut(s) 1860, 1892, 2013, 2045
Alw26I GTCTC 4 cut(s) 100, 549, 2213, 2597
AlwNI CAGNNNCTG 1 cut(s) 2483
Ama87I CYCGRG 1 cut(s) 2321
AoxI GGCC 6 cut(s) 1051, 1159, 1575, 1761, 2780, 3030
ApeKI GCWGC 5 cut(s) 317, 761, 1010, 1175, 1930
AspA2I CCTAGG 2 cut(s) 1061, 1742
AspLEI GCGC 1 cut(s) 2286
AspS9I GGNCC 9 cut(s) 416, 686, 887, 1159, 1208, 1534, 1608, 1761, 2843
AsuC2I CCSGG 1 cut(s) 1389
AvaI CYCGRG 1 cut(s) 2321
AvaII GGWCC 7 cut(s) 416, 686, 887, 1208, 1534, 1608, 2843
AvrII CCTAGG 2 cut(s) 1061, 1742
BalI TGGCCA 1 cut(s) 3032
BamHI GGATCC 2 cut(s) 188, 2039
BanII GRGCYC 3 cut(s) 1483, 2719, 2989
BarI GAAGNNNNNNTAC 2 cut(s) 1431, 1463
BbsI GAAGAC 2 cut(s) 980, 2884
BbvCI CCTCAGC 1 cut(s) 1179
BbvI GCAGC 5 cut(s) 304, 773, 997, 1162, 1942
BccI CCATC 7 cut(s) 82, 1560, 1782, 2135, 2461, 2629, 3280
BceAI ACGGC 1 cut(s) 1038
BcgI CGANNNNNNTGC 2 cut(s) 2312, 2346
BciT130I CCWGG 5 cut(s) 411, 1545, 2037, 3029, 3285
BciVI GTATCC 1 cut(s) 2245
BcnI CCSGG 1 cut(s) 1389
BcoDI GTCTC 4 cut(s) 100, 549, 2213, 2597
BfmI CTRYAG 7 cut(s) 550, 990, 1359, 1702, 1819, 2607, 2638
BfuAI ACCTGC 2 cut(s) 781, 2641
BfuI GTATCC 1 cut(s) 2245
BglII AGATCT 2 cut(s) 1067, 2234
BisI GCNGC 8 cut(s) 318, 459, 674, 762, 1011, 1176, 1311, 1931
BlnI CCTAGG 2 cut(s) 1061, 1742
BlsI GCNGC 8 cut(s) 319, 460, 675, 763, 1012, 1177, 1312, 1932
Bme1390I CCNGG 6 cut(s) 411, 1389, 1545, 2037, 3029, 3285
Bme18I GGWCC 7 cut(s) 416, 686, 887, 1208, 1534, 1608, 2843
BmeT110I CYCGRG 1 cut(s) 2321
BmgT120I GGNCC 9 cut(s) 416, 686, 887, 1159, 1208, 1534, 1608, 1761, 2843
BmiI GGNNCC 7 cut(s) 190, 687, 1309, 1393, 2041, 2814, 3135
BmrFI CCNGG 6 cut(s) 411, 1389, 1545, 2037, 3029, 3285
BmrI ACTGGG 2 cut(s) 2583, 3168
BmsI GCATC 9 cut(s) 45, 578, 640, 748, 1388, 1686, 2386, 2547, 2730
BmuI ACTGGG 2 cut(s) 2583, 3168
BpiI GAAGAC 2 cut(s) 980, 2884
BpmI CTGGAG 1 cut(s) 1592
Bpu10I CCTNAGC 2 cut(s) 1179, 3009
BpuEI CTTGAG 3 cut(s) 823, 1644, 2742
BpuMI CCSGG 1 cut(s) 1389
BsaBI GATNNNNATC 1 cut(s) 3118
BsaWI WCCGGW 1 cut(s) 2827
BsaXI ACNNNNNCTCC 2 cut(s) 3084, 3114
Bsc4I CCNNNNNNNGG 8 cut(s) 471, 683, 1748, 1777, 2459, 2887, 2972, 3034
Bse1I ACTGG 9 cut(s) 890, 982, 1625, 2014, 2073, 2542, 2589, 2846, 3163
Bse3DI GCAATG 2 cut(s) 39, 87
Bse8I GATNNNNATC 1 cut(s) 3118
BseBI CCWGG 5 cut(s) 411, 1545, 2037, 3029, 3285
BseJI GATNNNNATC 1 cut(s) 3118
BseLI CCNNNNNNNGG 8 cut(s) 471, 683, 1748, 1777, 2459, 2887, 2972, 3034
BseMI GCAATG 2 cut(s) 39, 87
BseNI ACTGG 9 cut(s) 890, 982, 1625, 2014, 2073, 2542, 2589, 2846, 3163
BseRI GAGGAG 3 cut(s) 32, 1196, 2607
BseXI GCAGC 5 cut(s) 304, 773, 997, 1162, 1942
Bsh1236I CGCG 1 cut(s) 3178
BshFI GGCC 6 cut(s) 1053, 1161, 1577, 1763, 2782, 3032
BsiHKCI CYCGRG 1 cut(s) 2321
BsiSI CCGG 4 cut(s) 592, 1388, 1802, 2828
BslFI GGGAC 3 cut(s) 1119, 2872, 3006
BslI CCNNNNNNNGG 8 cut(s) 471, 683, 1748, 1777, 2459, 2887, 2972, 3034
BsmAI GTCTC 4 cut(s) 100, 549, 2213, 2597
BsmFI GGGAC 3 cut(s) 1119, 2872, 3006
BsmI GAATGC 1 cut(s) 2560
BsnI GGCC 6 cut(s) 1053, 1161, 1577, 1763, 2782, 3032
BsoBI CYCGRG 1 cut(s) 2321
Bsp1286I GDGCHC 3 cut(s) 1483, 2719, 2989
Bsp1407I TGTACA 1 cut(s) 164
Bsp19I CCATGG 1 cut(s) 2302
BspACI CCGC 8 cut(s) 23, 458, 674, 1311, 3061, 3176, 3178, 3228
BspANI GGCC 6 cut(s) 1053, 1161, 1577, 1763, 2782, 3032
BspFNI CGCG 1 cut(s) 3178
BspHI TCATGA 4 cut(s) 610, 1324, 1963, 2595
BspLI GGNNCC 7 cut(s) 190, 687, 1309, 1393, 2041, 2814, 3135
BspMAI CTGCAG 1 cut(s) 2642
BspMI ACCTGC 2 cut(s) 781, 2641
BsrDI GCAATG 2 cut(s) 39, 87
BsrGI TGTACA 1 cut(s) 164
BsrI ACTGG 9 cut(s) 890, 982, 1625, 2014, 2073, 2542, 2589, 2846, 3163
BssT1I CCWWGG 9 cut(s) 1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967, 3033
Bst2UI CCWGG 5 cut(s) 411, 1545, 2037, 3029, 3285
Bst4CI ACNGT 9 cut(s) 148, 164, 247, 258, 519, 1201, 1300, 2447, 3242
Bst6I CTCTTC 3 cut(s) 116, 1265, 2908
BstAUI TGTACA 1 cut(s) 164
BstC8I GCNNGC 3 cut(s) 2179, 2638, 3253
BstDSI CCRYGG 2 cut(s) 2302, 3176
BstENI CCTNNNNNAGG 1 cut(s) 3032
BstFNI CGCG 1 cut(s) 3178
BstHHI GCGC 1 cut(s) 2286
BstMAI GTCTC 4 cut(s) 100, 549, 2213, 2597
BstMWI GCNNNNNNNGC 5 cut(s) 29, 98, 605, 1927, 2505
BstNI CCWGG 5 cut(s) 411, 1545, 2037, 3029, 3285
BstNSI RCATGY 4 cut(s) 1010, 1507, 1816, 2181
BstSCI CCNGG 6 cut(s) 409, 1387, 1543, 2035, 3027, 3283
BstSFI CTRYAG 7 cut(s) 550, 990, 1359, 1702, 1819, 2607, 2638
BstUI CGCG 1 cut(s) 3178
BstV1I GCAGC 5 cut(s) 304, 773, 997, 1162, 1942
BstV2I GAAGAC 2 cut(s) 980, 2884
BstX2I RGATCY 6 cut(s) 188, 1067, 2021, 2039, 2092, 2234
BstYI RGATCY 6 cut(s) 188, 1067, 2021, 2039, 2092, 2234
BsuI GTATCC 1 cut(s) 2245
BsuRI GGCC 6 cut(s) 1053, 1161, 1577, 1763, 2782, 3032
BtgI CCRYGG 2 cut(s) 2302, 3176
BtsI GCAGTG 2 cut(s) 2811, 2914
BtsIMutI CAGTG 5 cut(s) 160, 524, 897, 2811, 2914
BveI ACCTGC 2 cut(s) 781, 2641
Cac8I GCNNGC 3 cut(s) 2179, 2638, 3253
CaiI CAGNNNCTG 1 cut(s) 2483
CciI TCATGA 4 cut(s) 610, 1324, 1963, 2595
CfoI GCGC 1 cut(s) 2286
Cfr13I GGNCC 9 cut(s) 416, 686, 887, 1159, 1208, 1534, 1608, 1761, 2843
Cfr42I CCGCGG 1 cut(s) 3179
CseI GACGC 2 cut(s) 765, 827
CsiI ACCWGGT 2 cut(s) 409, 3283
Csp6I GTAC 7 cut(s) 165, 1768, 1955, 2145, 2448, 3173, 3288
CspCI CAANNNNNGTGG 2 cut(s) 166, 201
CviQI GTAC 7 cut(s) 165, 1768, 1955, 2145, 2448, 3173, 3288
DraI TTTAAA 1 cut(s) 3118
DrdI GACNNNNNNGTC 2 cut(s) 2227, 2501
DseDI GACNNNNNNGTC 2 cut(s) 2227, 2501
EaeI YGGCCR 1 cut(s) 3030
Eam1104I CTCTTC 3 cut(s) 116, 1265, 2908
EarI CTCTTC 3 cut(s) 116, 1265, 2908
Eco130I CCWWGG 9 cut(s) 1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967, 3033
Eco24I GRGCYC 3 cut(s) 1483, 2719, 2989
Eco47I GGWCC 7 cut(s) 416, 686, 887, 1208, 1534, 1608, 2843
Eco57I CTGAAG 2 cut(s) 200, 2591
Eco88I CYCGRG 1 cut(s) 2321
EcoNI CCTNNNNNAGG 1 cut(s) 3032
EcoO109I RGGNCCY 2 cut(s) 686, 1534
EcoRI GAATTC 3 cut(s) 210, 943, 2657
EcoRII CCWGG 5 cut(s) 409, 1543, 2035, 3027, 3283
EcoT14I CCWWGG 9 cut(s) 1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967, 3033
EcoT22I ATGCAT 1 cut(s) 2562
EcoT38I GRGCYC 3 cut(s) 1483, 2719, 2989
ErhI CCWWGG 9 cut(s) 1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967, 3033
FalI AAGNNNNNCTT 4 cut(s) 1662, 1694, 2206, 2238
FaqI GGGAC 3 cut(s) 1119, 2872, 3006
FauI CCCGC 2 cut(s) 3054, 3221
FauNDI CATATG 1 cut(s) 2799
FblI GTMKAC 1 cut(s) 3244
Fnu4HI GCNGC 8 cut(s) 318, 459, 674, 762, 1011, 1176, 1311, 1931
FriOI GRGCYC 3 cut(s) 1483, 2719, 2989
Fsp4HI GCNGC 8 cut(s) 318, 459, 674, 762, 1011, 1176, 1311, 1931
GlaI GCGC 1 cut(s) 2285
GluI GCNGC 8 cut(s) 318, 459, 674, 762, 1011, 1176, 1311, 1931
GsuI CTGGAG 1 cut(s) 1592
HaeIII GGCC 6 cut(s) 1053, 1161, 1577, 1763, 2782, 3032
HapII CCGG 4 cut(s) 592, 1388, 1802, 2828
HgaI GACGC 2 cut(s) 765, 827
HhaI GCGC 1 cut(s) 2286
Hin6I GCGC 1 cut(s) 2284
HinP1I GCGC 1 cut(s) 2284
HincII GTYRAC 1 cut(s) 3245
HindII GTYRAC 1 cut(s) 3245
HindIII AAGCTT 2 cut(s) 1860, 2204
HpaII CCGG 4 cut(s) 592, 1388, 1802, 2828
Hpy166II GTNNAC 6 cut(s) 160, 416, 1208, 1448, 2527, 3245
Hpy8I GTNNAC 6 cut(s) 160, 416, 1208, 1448, 2527, 3245
HpyCH4III ACNGT 9 cut(s) 148, 164, 247, 258, 519, 1201, 1300, 2447, 3242
HpyCH4IV ACGT 3 cut(s) 370, 696, 2147
HpyF10VI GCNNNNNNNGC 5 cut(s) 29, 98, 605, 1927, 2505
HpySE526I ACGT 3 cut(s) 370, 696, 2147
HspAI GCGC 1 cut(s) 2284
KspI CCGCGG 1 cut(s) 3179
LmnI GCTCC 7 cut(s) 77, 579, 1307, 1391, 2462, 3139, 3262
Lsp1109I GCAGC 5 cut(s) 304, 773, 997, 1162, 1942
LweI GCATC 9 cut(s) 45, 578, 640, 748, 1388, 1686, 2386, 2547, 2730
MabI ACCWGGT 2 cut(s) 409, 3283
MaeII ACGT 3 cut(s) 370, 696, 2147
MfeI CAATTG 1 cut(s) 1163
MflI RGATCY 6 cut(s) 188, 1067, 2021, 2039, 2092, 2234
MhlI GDGCHC 3 cut(s) 1483, 2719, 2989
MlsI TGGCCA 1 cut(s) 3032
MluNI TGGCCA 1 cut(s) 3032
MlyI GAGTC 3 cut(s) 102, 1141, 2255
MmeI TCCRAC 3 cut(s) 336, 2229, 3070
Mox20I TGGCCA 1 cut(s) 3032
Mph1103I ATGCAT 1 cut(s) 2562
MscI TGGCCA 1 cut(s) 3032
MseI TTAA 8 cut(s) 324, 387, 1551, 1668, 2435, 2763, 2921, 3117
MslI CAYNNNNRTG 1 cut(s) 2186
Msp20I TGGCCA 1 cut(s) 3032
MspA1I CMGCKG 2 cut(s) 995, 3178
MspI CCGG 4 cut(s) 592, 1388, 1802, 2828
MspR9I CCNGG 6 cut(s) 411, 1389, 1545, 2037, 3029, 3285
MunI CAATTG 1 cut(s) 1163
Mva1269I GAATGC 1 cut(s) 2560
MvaI CCWGG 5 cut(s) 411, 1545, 2037, 3029, 3285
MvnI CGCG 1 cut(s) 3178
MwoI GCNNNNNNNGC 5 cut(s) 29, 98, 605, 1927, 2505
NciI CCSGG 1 cut(s) 1389
NcoI CCATGG 1 cut(s) 2302
NdeI CATATG 1 cut(s) 2799
NlaIV GGNNCC 7 cut(s) 190, 687, 1309, 1393, 2041, 2814, 3135
NmuCI GTSAC 8 cut(s) 241, 486, 736, 1055, 2170, 2646, 2726, 3236
NsiI ATGCAT 1 cut(s) 2562
NspI RCATGY 4 cut(s) 1010, 1507, 1816, 2181
PaeI GCATGC 1 cut(s) 2181
PagI TCATGA 4 cut(s) 610, 1324, 1963, 2595
PaqCI CACCTGC 1 cut(s) 2641
PcsI WCGNNNNNNNCGW 1 cut(s) 574
PctI GAATGC 1 cut(s) 2560
PfoI TCCNGGA 1 cut(s) 1387
PkrI GCNGC 8 cut(s) 319, 460, 675, 763, 1012, 1177, 1312, 1932
PleI GAGTC 3 cut(s) 102, 1140, 2254
PpsI GAGTC 3 cut(s) 102, 1140, 2254
PpuMI RGGWCCY 2 cut(s) 686, 1534
Psp1406I AACGTT 1 cut(s) 370
Psp5II RGGWCCY 2 cut(s) 686, 1534
Psp6I CCWGG 5 cut(s) 409, 1543, 2035, 3027, 3283
PspGI CCWGG 5 cut(s) 409, 1543, 2035, 3027, 3283
PspN4I GGNNCC 7 cut(s) 190, 687, 1309, 1393, 2041, 2814, 3135
PspPI GGNCC 9 cut(s) 416, 686, 887, 1159, 1208, 1534, 1608, 1761, 2843
PspPPI RGGWCCY 2 cut(s) 686, 1534
PsrI GAACNNNNNNTAC 2 cut(s) 141, 173
PstI CTGCAG 1 cut(s) 2642
PstNI CAGNNNCTG 1 cut(s) 2483
PsuI RGATCY 6 cut(s) 188, 1067, 2021, 2039, 2092, 2234
PvuII CAGCTG 1 cut(s) 995
RsaI GTAC 7 cut(s) 166, 1769, 1956, 2146, 2449, 3174, 3289
RsaNI GTAC 7 cut(s) 165, 1768, 1955, 2145, 2448, 3173, 3288
RseI CAYNNNNRTG 1 cut(s) 2186
SacII CCGCGG 1 cut(s) 3179
SalI GTCGAC 1 cut(s) 3243
SaqAI TTAA 8 cut(s) 324, 387, 1551, 1668, 2435, 2763, 2921, 3117
SatI GCNGC 8 cut(s) 318, 459, 674, 762, 1011, 1176, 1311, 1931
Sau96I GGNCC 9 cut(s) 416, 686, 887, 1159, 1208, 1534, 1608, 1761, 2843
SchI GAGTC 3 cut(s) 102, 1141, 2255
ScrFI CCNGG 6 cut(s) 411, 1389, 1545, 2037, 3029, 3285
SduI GDGCHC 3 cut(s) 1483, 2719, 2989
SexAI ACCWGGT 2 cut(s) 409, 3283
SfaNI GCATC 9 cut(s) 45, 578, 640, 748, 1388, 1686, 2386, 2547, 2730
SfcI CTRYAG 7 cut(s) 550, 990, 1359, 1702, 1819, 2607, 2638
Sfr303I CCGCGG 1 cut(s) 3179
SgrBI CCGCGG 1 cut(s) 3179
SinI GGWCC 7 cut(s) 416, 686, 887, 1208, 1534, 1608, 2843
SmiI ATTTAAAT 1 cut(s) 3118
SmiMI CAYNNNNRTG 1 cut(s) 2186
SmlI CTYRAG 3 cut(s) 802, 1659, 2757
SmoI CTYRAG 3 cut(s) 802, 1659, 2757
SphI GCATGC 1 cut(s) 2181
SsiI CCGC 8 cut(s) 23, 458, 674, 1311, 3061, 3176, 3178, 3228
SspI AATATT 2 cut(s) 445, 3126
StyD4I CCNGG 6 cut(s) 409, 1387, 1543, 2035, 3027, 3283
StyI CCWWGG 9 cut(s) 1061, 1073, 1591, 1742, 2302, 2426, 2487, 2967, 3033
SwaI ATTTAAAT 1 cut(s) 3118
TaaI ACNGT 9 cut(s) 148, 164, 247, 258, 519, 1201, 1300, 2447, 3242
TaiI ACGT 3 cut(s) 373, 699, 2150
TaqI TCGA 2 cut(s) 1857, 3244
TatI WGTACW 1 cut(s) 164
TauI GCSGC 3 cut(s) 461, 676, 1313
Tru1I TTAA 8 cut(s) 324, 387, 1551, 1668, 2435, 2763, 2921, 3117
Tru9I TTAA 8 cut(s) 324, 387, 1551, 1668, 2435, 2763, 2921, 3117
TscAI CASTG 5 cut(s) 167, 524, 897, 2811, 2921
TseFI GTSAC 8 cut(s) 241, 486, 736, 1055, 2170, 2646, 2726, 3236
TseI GCWGC 5 cut(s) 317, 761, 1010, 1175, 1930
Tsp45I GTSAC 8 cut(s) 241, 486, 736, 1055, 2170, 2646, 2726, 3236
TspGWI ACGGA 3 cut(s) 566, 2475, 2745
TspRI CASTG 5 cut(s) 167, 524, 897, 2811, 2921
VpaK11BI GGWCC 7 cut(s) 416, 686, 887, 1208, 1534, 1608, 2843
XagI CCTNNNNNAGG 1 cut(s) 3032
XbaI TCTAGA 3 cut(s) 917, 1246, 2231
XceI RCATGY 4 cut(s) 1010, 1507, 1816, 2181
XcmI CCANNNNNNNNNTGG 1 cut(s) 507
XmaJI CCTAGG 2 cut(s) 1061, 1742
XmiI GTMKAC 1 cut(s) 3244
Zsp2I ATGCAT 1 cut(s) 2562
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.