Rw3G003820

Domain of unknown function (DUF3444)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000587
Physical Location & Seq
Forward (+)
3285056 .. 3288848
3793 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G003820.1

Sequence Viewer

Length: 2214 bp
ATGCCAGACAATCTGCTCCTGCCGTTCTTGCCGTCTCGCTACAGAGTTACGCAGCTTCTCCAATTTTACTGTGGCGATGGCAACCCACATCGCAAAGTTGATTTGATTGTTTTCTGTGGAGCAAGGAAGTTGGCACAGAAGGCTCAACAACTCTTCCCGGGGCTTGAGAATATTTCTCAATTACTTGCAGTATGTGAAGTTCATTGTTCAGCTGAAAATAAGCTAGATGGCAGTGAAATGGACTGGTATGGGATTCTGCAGGTTCAAAGATTTTCTCATGAGGCAATCATCAAGAAACAATTCAGAAAACTCGGGCTGTTACTTAATCCTGATAAGAACATGGTTGCTGGTGCGGAGGCTGCTTTTAAGCTGATCGGGGAAGCAAATGCAGTGCTGGACGACCGAGGAAAACATTTTAGATATGACATGAAGTGTAGAGCTCTTCTGAGAACTGGTGTAATACAATCATCAGCTCATCAGTTTAATGAAAATTTATTTGTCAGGAAACACTGTGATGCTGCAAGAAATGTTCAGAATATTCCCGAGTCACAGTGCGCTAGCATGAATGAACTTCAAAAGAGGCAAGCAGACACATTTTACACTTGTTGTCCCTTCTGTAAAACAGTGTATCCATGTGCCAAAGACTCGGCAAATCGATTGTTACGTTGTCAAAGATGTCGAAGACTTTTCATTGCCTCTGATTGTGGTATTCAAGGGGTGCACTTAGAAACTCTCAGGAACCAGTTTGCAAATCATACAGAACTTCCTAACCAGATTCCTATAAAAGTAGTCTCAAATCATGGTGGAACTGGAAATCTACCTGTTACAAGATTTCAAGCCGGAAATGCAGCATCAAATCCTGTGTCAAAGGCGGGAGTTGCTGCTGATGTTGATGGAGCTTCTAACACTCAAAAGAAAAATAGTGAGCATGGGGTTGCAATAAGGAAGGAGGGTGTTGAAATATCTAAGTCTGGTTCAGTGAAGTCCAAGGAGTCAGGACCTTCGAGAAATCTGAACAAAAAAAGAGGGAAGTCAATTGAATCTGTTGGAAGTTTCAAGACTGGAAACAGAGCTAGACCTGATTCTGAGCATGTTATTCAAGAAAAAGTCAGTATTCCTTCTGAACTCAATGGAGGCCCTCACCTTTGCATATCTTCGATGAAAGAGAAGAACCTTTCGTACATTGGTAATGATGATGATGATGATTTTGTGAACCCTCCAAACTGGTCAGGGAAGAGCCCACTGTCCAGTGCTAGTGAAAAGAAAAGAAAGAATGCAGTATATGGTGGGTGTGGGTCATTTAATATTGATAGGTCACCTTATTCTGCTGATGCTGCTGTGGATGGACATAAGAAGAAGGCAAGACAAAAAGTAAGCTTCCCTCTAGAAGAATGTATGCCCAGCAAAAAGAGTAAAACTGGGGAACCTGTGCCAGATAATGATGAAACCAACTTCAAAGCTAATGTCACTCCTGGGCCAAATGTAGATGTTGCATCCACACCACAACTCATTGAGGTTCCTGATCCTCAATTCCATAAGTTTGTGCTTAATGAAGATAAGTTGTCAAGTATTTTTAAAGCTAATCAAACATGGGCTCTTTTTGATGATGAAGCAGATGGCATGCCCAGGTACTATGCTTTTGTCAAGAAAGTATTACACACCCCGGGATTTAAGCTGAAAATCATCTGGCTGGATGCCAATCCAGATAACCGAGGTGAGATTGATTGGTGCGAAAAGGAGTTGCCAGTTGCTTGTGGTAAGTTCAAACTTGGGAGTACTGAAGAAATTACAGATCATCGTATGTTTTCTCATCAGGTGCATTGCAGAAAAGGCAGGGGTAAAAGCTCTTTTCTGGTATATCCTAGGAAGGGTGAAACTTGGGCCCTCTACAAGAACTGGGATATTGGATGGAGTTCTGAGCCTGAAAAGCACATACCATATAAATATGAATTTGTTGAAGTCCTGTCGGATTTTGTTGATGACATTGGAACTGAAGTTGCTTCTTTAGCCAAAGTAAAAGGATTTGTCAGTCTGTTTGAGCAAAAGAAGCAGAGTGGTGATATCTTGCATCGAATTCCTCCTAATGAGCTATATAGATTTTCGCATCAAATTCCTTCATTCAAGATGACTGGGAATGAAAGAGATGATGTTCCGAAAGGGTCCTTTGAGCTTGATCCTGCTTCTTTGCCCACCAATCTTGATGAACTATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3444 DnaJ

Protein Analysis

737

Amino Acids

82.36

Weight (kDa)

8.68

Isoelectric Point (pI)

31.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 81 - 142 1.3e-12 DnaJ domain
DUF3444 PF11926 502 - 713 5.8e-78 Domain of unknown function (DUF3444)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 250
AciI CCGC 2 cut(s) 353, 872
AclWI GGATC 2 cut(s) 1517, 2168
AcsI RAATTY 4 cut(s) 490, 1949, 2073, 2109
AcuI CTGAAG 2 cut(s) 1800, 2013
AfaI GTAC 3 cut(s) 1181, 1631, 1777
AfiI CCNNNNNNNGG 1 cut(s) 1868
AjnI CCWGG 2 cut(s) 1471, 1625
Alw21I GWGCWC 2 cut(s) 442, 723
Alw26I GTCTC 2 cut(s) 39, 796
Alw44I GTGCAC 1 cut(s) 719
AlwI GGATC 2 cut(s) 1517, 2168
Ama87I CYCGRG 4 cut(s) 157, 311, 542, 1663
AoxI GGCC 3 cut(s) 1135, 1475, 1881
ApaI GGGCCC 1 cut(s) 1885
ApaLI GTGCAC 1 cut(s) 719
ApeKI GCWGC 6 cut(s) 52, 359, 518, 848, 881, 1334
ApoI RAATTY 4 cut(s) 490, 1949, 2073, 2109
ArsI GACNNNNNNTTYG 4 cut(s) 848, 880, 1449, 1481
Asp700I GAANNNNTTC 1 cut(s) 299
AspA2I CCTAGG 1 cut(s) 1862
AspLEI GCGC 1 cut(s) 557
AspS9I GGNCC 6 cut(s) 998, 1136, 1475, 1881, 1882, 2160
AsuC2I CCSGG 4 cut(s) 158, 159, 1664, 1665
AsuHPI GGTGA 5 cut(s) 1133, 1308, 1727, 1883, 2069
AsuNHI GCTAGC 1 cut(s) 557
AvaI CYCGRG 4 cut(s) 157, 311, 542, 1663
AvaII GGWCC 2 cut(s) 998, 2160
AvrII CCTAGG 1 cut(s) 1862
BaeGI GKGCMC 2 cut(s) 723, 1885
BanII GRGCYC 4 cut(s) 442, 1241, 1597, 1885
BbsI GAAGAC 1 cut(s) 688
Bbv12I GWGCWC 2 cut(s) 442, 723
BbvI GCAGC 6 cut(s) 64, 346, 505, 860, 868, 1321
BccI CCATC 6 cut(s) 71, 221, 887, 1337, 1610, 1902
BceAI ACGGC 2 cut(s) 7, 16
BciT130I CCWGG 2 cut(s) 1473, 1627
BciVI GTATCC 1 cut(s) 639
BcnI CCSGG 4 cut(s) 158, 159, 1664, 1665
BcoDI GTCTC 2 cut(s) 39, 796
BfaI CTAG 6 cut(s) 224, 558, 1074, 1254, 1385, 1863
BfmI CTRYAG 2 cut(s) 40, 257
BfuAI ACCTGC 1 cut(s) 250
BfuI GTATCC 1 cut(s) 639
BisI GCNGC 6 cut(s) 53, 360, 519, 849, 882, 1335
BlnI CCTAGG 1 cut(s) 1862
BlsI GCNGC 6 cut(s) 54, 361, 520, 850, 883, 1336
BmcAI AGTACT 1 cut(s) 1777
Bme1390I CCNGG 6 cut(s) 158, 159, 1473, 1627, 1664, 1665
Bme18I GGWCC 2 cut(s) 998, 2160
BmeT110I CYCGRG 4 cut(s) 157, 311, 542, 1663
BmgT120I GGNCC 6 cut(s) 998, 1136, 1475, 1881, 1882, 2160
BmiI GGNNCC 5 cut(s) 740, 1425, 1518, 1883, 2161
BmrFI CCNGG 6 cut(s) 158, 159, 1473, 1627, 1664, 1665
BmrI ACTGGG 3 cut(s) 1428, 1906, 2139
BmsI GCATC 7 cut(s) 505, 860, 1321, 1502, 1684, 2077, 2113
BmtI GCTAGC 1 cut(s) 561
BmuI ACTGGG 3 cut(s) 1428, 1906, 2139
BpiI GAAGAC 1 cut(s) 688
BpuEI CTTGAG 1 cut(s) 185
BpuMI CCSGG 4 cut(s) 158, 159, 1664, 1665
Bsa29I ATCGAT 1 cut(s) 655
BsaBI GATNNNNATC 1 cut(s) 1698
Bsc4I CCNNNNNNNGG 1 cut(s) 1868
Bse3DI GCAATG 2 cut(s) 690, 1819
Bse8I GATNNNNATC 1 cut(s) 1698
BseBI CCWGG 2 cut(s) 1473, 1627
BseCI ATCGAT 1 cut(s) 655
BseGI GGATG 4 cut(s) 1348, 1493, 1699, 1913
BseJI GATNNNNATC 1 cut(s) 1698
BseLI CCNNNNNNNGG 1 cut(s) 1868
BseMI GCAATG 2 cut(s) 690, 1819
BseMII CTCAG 4 cut(s) 437, 748, 1077, 1908
BseSI GKGCMC 2 cut(s) 723, 1885
BseXI GCAGC 6 cut(s) 64, 346, 505, 860, 868, 1321
BseYI CCCAGC 1 cut(s) 1400
Bsh1285I CGRYCG 1 cut(s) 403
BshFI GGCC 3 cut(s) 1137, 1477, 1883
BshVI ATCGAT 1 cut(s) 655
BsiEI CGRYCG 1 cut(s) 403
BsiHKAI GWGCWC 2 cut(s) 442, 723
BsiHKCI CYCGRG 4 cut(s) 157, 311, 542, 1663
BsiSI CCGG 3 cut(s) 158, 840, 1664
BslFI GGGAC 1 cut(s) 594
BslI CCNNNNNNNGG 1 cut(s) 1868
BsmAI GTCTC 2 cut(s) 39, 796
BsmBI CGTCTC 1 cut(s) 39
BsmFI GGGAC 1 cut(s) 594
BsmI GAATGC 1 cut(s) 1279
BsnI GGCC 3 cut(s) 1137, 1477, 1883
BsoBI CYCGRG 4 cut(s) 157, 311, 542, 1663
Bsp120I GGGCCC 1 cut(s) 1881
Bsp1286I GDGCHC 5 cut(s) 442, 723, 1241, 1597, 1885
Bsp143I GATC 4 cut(s) 372, 1522, 1792, 2173
BspACI CCGC 2 cut(s) 353, 872
BspANI GGCC 3 cut(s) 1137, 1477, 1883
BspCNI CTCAG 4 cut(s) 438, 747, 1078, 1909
BspDI ATCGAT 1 cut(s) 655
BspHI TCATGA 1 cut(s) 277
BspLI GGNNCC 5 cut(s) 740, 1425, 1518, 1883, 2161
BspMAI CTGCAG 1 cut(s) 261
BspMI ACCTGC 1 cut(s) 250
BspOI GCTAGC 1 cut(s) 561
BspPI GGATC 2 cut(s) 1517, 2168
BspQI GCTCTTC 2 cut(s) 447, 1229
BsrDI GCAATG 2 cut(s) 690, 1819
BssMI GATC 4 cut(s) 372, 1522, 1792, 2173
BssT1I CCWWGG 2 cut(s) 987, 1862
Bst2UI CCWGG 2 cut(s) 1473, 1627
Bst4CI ACNGT 5 cut(s) 71, 512, 552, 625, 1245
Bst6I CTCTTC 3 cut(s) 158, 447, 1229
BstC8I GCNNGC 3 cut(s) 559, 585, 1622
BstDEI CTNAG 6 cut(s) 446, 724, 734, 966, 1086, 1917
BstEII GGTNACC 1 cut(s) 1314
BstF5I GGATG 4 cut(s) 1348, 1493, 1699, 1913
BstHHI GCGC 1 cut(s) 557
BstKTI GATC 4 cut(s) 375, 1525, 1795, 2176
BstMAI GTCTC 2 cut(s) 39, 796
BstMBI GATC 4 cut(s) 372, 1522, 1792, 2173
BstMCI CGRYCG 1 cut(s) 403
BstNI CCWGG 2 cut(s) 1473, 1627
BstNSI RCATGY 2 cut(s) 1094, 1624
BstPI GGTNACC 1 cut(s) 1314
BstSCI CCNGG 6 cut(s) 156, 157, 1471, 1625, 1662, 1663
BstSFI CTRYAG 2 cut(s) 40, 257
BstSLI GKGCMC 2 cut(s) 723, 1885
BstV1I GCAGC 6 cut(s) 64, 346, 505, 860, 868, 1321
BstV2I GAAGAC 1 cut(s) 688
Bsu15I ATCGAT 1 cut(s) 655
BsuI GTATCC 1 cut(s) 639
BsuRI GGCC 3 cut(s) 1137, 1477, 1883
BsuTUI ATCGAT 1 cut(s) 655
BtgZI GCGATG 2 cut(s) 74, 90
BtsCI GGATG 4 cut(s) 1348, 1493, 1699, 1913
BtsI GCAGTG 2 cut(s) 238, 396
BtsIMutI CAGTG 8 cut(s) 238, 396, 508, 557, 630, 984, 1241, 1255
BveI ACCTGC 1 cut(s) 250
Cac8I GCNNGC 3 cut(s) 559, 585, 1622
CciI TCATGA 1 cut(s) 277
CfoI GCGC 1 cut(s) 557
Cfr13I GGNCC 6 cut(s) 998, 1136, 1475, 1881, 1882, 2160
Cfr9I CCCGGG 2 cut(s) 157, 1663
ClaI ATCGAT 1 cut(s) 655
Csp6I GTAC 3 cut(s) 1180, 1630, 1776
CspCI CAANNNNNGTGG 2 cut(s) 2179, 2214
CviQI GTAC 3 cut(s) 1180, 1630, 1776
DdeI CTNAG 6 cut(s) 446, 724, 734, 966, 1086, 1917
DpnI GATC 4 cut(s) 374, 1524, 1794, 2175
DpnII GATC 4 cut(s) 372, 1522, 1792, 2173
DraI TTTAAA 1 cut(s) 1576
Eam1104I CTCTTC 3 cut(s) 158, 447, 1229
EarI CTCTTC 3 cut(s) 158, 447, 1229
Ecl136II GAGCTC 1 cut(s) 440
Eco130I CCWWGG 2 cut(s) 987, 1862
Eco24I GRGCYC 4 cut(s) 442, 1241, 1597, 1885
Eco32I GATATC 1 cut(s) 2062
Eco47I GGWCC 2 cut(s) 998, 2160
Eco53kI GAGCTC 1 cut(s) 440
Eco57I CTGAAG 2 cut(s) 1800, 2013
Eco88I CYCGRG 4 cut(s) 157, 311, 542, 1663
Eco91I GGTNACC 1 cut(s) 1314
EcoICRI GAGCTC 1 cut(s) 440
EcoO109I RGGNCCY 4 cut(s) 998, 1136, 1882, 2160
EcoO65I GGTNACC 1 cut(s) 1314
EcoRI GAATTC 1 cut(s) 2073
EcoRII CCWGG 2 cut(s) 1471, 1625
EcoRV GATATC 1 cut(s) 2062
EcoT14I CCWWGG 2 cut(s) 987, 1862
EcoT38I GRGCYC 4 cut(s) 442, 1241, 1597, 1885
ErhI CCWWGG 2 cut(s) 987, 1862
Esp3I CGTCTC 1 cut(s) 39
FaqI GGGAC 1 cut(s) 594
FauI CCCGC 1 cut(s) 865
Fnu4HI GCNGC 6 cut(s) 53, 360, 519, 849, 882, 1335
FokI GGATG 4 cut(s) 1355, 1480, 1706, 1920
FriOI GRGCYC 4 cut(s) 442, 1241, 1597, 1885
Fsp4HI GCNGC 6 cut(s) 53, 360, 519, 849, 882, 1335
FspBI CTAG 6 cut(s) 224, 558, 1074, 1254, 1385, 1863
GlaI GCGC 1 cut(s) 556
GluI GCNGC 6 cut(s) 53, 360, 519, 849, 882, 1335
GsaI CCCAGC 1 cut(s) 1404
HaeIII GGCC 3 cut(s) 1137, 1477, 1883
HapII CCGG 3 cut(s) 158, 840, 1664
HhaI GCGC 1 cut(s) 557
Hin6I GCGC 1 cut(s) 555
HinP1I GCGC 1 cut(s) 555
HindIII AAGCTT 1 cut(s) 1375
HinfI GANTC 7 cut(s) 253, 545, 644, 775, 992, 1040, 1082
HpaII CCGG 3 cut(s) 158, 840, 1664
HphI GGTGA 5 cut(s) 1133, 1308, 1727, 1883, 2069
Hpy166II GTNNAC 2 cut(s) 721, 1213
Hpy8I GTNNAC 2 cut(s) 721, 1213
HpyAV CCTTC 8 cut(s) 133, 622, 940, 1011, 1128, 1351, 1861, 2124
HpyCH4III ACNGT 5 cut(s) 71, 512, 552, 625, 1245
HpyCH4IV ACGT 1 cut(s) 664
HpyF3I CTNAG 6 cut(s) 446, 724, 734, 966, 1086, 1917
HpySE526I ACGT 1 cut(s) 664
HspAI GCGC 1 cut(s) 555
Kzo9I GATC 4 cut(s) 372, 1522, 1792, 2173
LguI GCTCTTC 2 cut(s) 447, 1229
LmnI GCTCC 3 cut(s) 21, 119, 896
Lsp1109I GCAGC 6 cut(s) 64, 346, 505, 860, 868, 1321
LweI GCATC 7 cut(s) 505, 860, 1321, 1502, 1684, 2077, 2113
MaeI CTAG 6 cut(s) 224, 558, 1074, 1254, 1385, 1863
MaeII ACGT 1 cut(s) 664
MaeIII GTNAC 7 cut(s) 46, 318, 546, 660, 823, 1314, 1465
MalI GATC 4 cut(s) 374, 1524, 1794, 2175
MboI GATC 4 cut(s) 372, 1522, 1792, 2173
MfeI CAATTG 1 cut(s) 1035
MhlI GDGCHC 5 cut(s) 442, 723, 1241, 1597, 1885
MlyI GAGTC 3 cut(s) 554, 638, 1001
MmeI TCCRAC 2 cut(s) 1027, 1947
MroXI GAANNNNTTC 1 cut(s) 299
MseI TTAA 7 cut(s) 324, 366, 483, 1302, 1548, 1575, 1671
MslI CAYNNNNRTG 1 cut(s) 513
MspA1I CMGCKG 1 cut(s) 212
MspI CCGG 3 cut(s) 158, 840, 1664
MspR9I CCNGG 6 cut(s) 158, 159, 1473, 1627, 1664, 1665
MunI CAATTG 1 cut(s) 1035
Mva1269I GAATGC 1 cut(s) 1279
MvaI CCWGG 2 cut(s) 1473, 1627
NciI CCSGG 4 cut(s) 158, 159, 1664, 1665
NdeII GATC 4 cut(s) 372, 1522, 1792, 2173
NheI GCTAGC 1 cut(s) 557
NlaIV GGNNCC 5 cut(s) 740, 1425, 1518, 1883, 2161
NmeAIII GCCGAG 1 cut(s) 626
NmuCI GTSAC 3 cut(s) 546, 1314, 1465
NspI RCATGY 2 cut(s) 1094, 1624
PaeI GCATGC 1 cut(s) 1624
PagI TCATGA 1 cut(s) 277
PciSI GCTCTTC 2 cut(s) 447, 1229
PcsI WCGNNNNNNNCGW 1 cut(s) 661
PctI GAATGC 1 cut(s) 1279
PdmI GAANNNNTTC 1 cut(s) 299
PfeI GAWTC 4 cut(s) 253, 775, 1040, 1082
PkrI GCNGC 6 cut(s) 54, 361, 520, 850, 883, 1336
PleI GAGTC 3 cut(s) 553, 638, 1000
PpsI GAGTC 3 cut(s) 553, 638, 1000
PpuMI RGGWCCY 2 cut(s) 998, 2160
Psp124BI GAGCTC 1 cut(s) 442
Psp5II RGGWCCY 2 cut(s) 998, 2160
Psp6I CCWGG 2 cut(s) 1471, 1625
PspEI GGTNACC 1 cut(s) 1314
PspFI CCCAGC 1 cut(s) 1400
PspGI CCWGG 2 cut(s) 1471, 1625
PspN4I GGNNCC 5 cut(s) 740, 1425, 1518, 1883, 2161
PspOMI GGGCCC 1 cut(s) 1881
PspPI GGNCC 6 cut(s) 998, 1136, 1475, 1881, 1882, 2160
PspPPI RGGWCCY 2 cut(s) 998, 2160
PsrI GAACNNNNNNTAC 4 cut(s) 183, 215, 1163, 1195
PstI CTGCAG 1 cut(s) 261
PvuII CAGCTG 1 cut(s) 212
RsaI GTAC 3 cut(s) 1181, 1631, 1777
RsaNI GTAC 3 cut(s) 1180, 1630, 1776
RseI CAYNNNNRTG 1 cut(s) 513
SacI GAGCTC 1 cut(s) 442
SapI GCTCTTC 2 cut(s) 447, 1229
SaqAI TTAA 7 cut(s) 324, 366, 483, 1302, 1548, 1575, 1671
SatI GCNGC 6 cut(s) 53, 360, 519, 849, 882, 1335
Sau3AI GATC 4 cut(s) 372, 1522, 1792, 2173
Sau96I GGNCC 6 cut(s) 998, 1136, 1475, 1881, 1882, 2160
ScaI AGTACT 1 cut(s) 1777
SchI GAGTC 3 cut(s) 554, 638, 1001
ScrFI CCNGG 6 cut(s) 158, 159, 1473, 1627, 1664, 1665
SduI GDGCHC 5 cut(s) 442, 723, 1241, 1597, 1885
SfaNI GCATC 7 cut(s) 505, 860, 1321, 1502, 1684, 2077, 2113
SfcI CTRYAG 2 cut(s) 40, 257
SinI GGWCC 2 cut(s) 998, 2160
SmaI CCCGGG 2 cut(s) 159, 1665
SmiMI CAYNNNNRTG 1 cut(s) 513
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
SphI GCATGC 1 cut(s) 1624
SsiI CCGC 2 cut(s) 353, 872
SspI AATATT 3 cut(s) 172, 538, 1306
SspMI CTAG 6 cut(s) 224, 558, 1074, 1254, 1385, 1863
SstI GAGCTC 1 cut(s) 442
StyD4I CCNGG 6 cut(s) 156, 157, 1471, 1625, 1662, 1663
StyI CCWWGG 2 cut(s) 987, 1862
TaaI ACNGT 5 cut(s) 71, 512, 552, 625, 1245
TaiI ACGT 1 cut(s) 667
TaqI TCGA 5 cut(s) 655, 679, 1004, 1157, 2071
TaqII GACCGA 1 cut(s) 417
TatI WGTACW 1 cut(s) 1775
TfiI GAWTC 4 cut(s) 253, 775, 1040, 1082
Tru1I TTAA 7 cut(s) 324, 366, 483, 1302, 1548, 1575, 1671
Tru9I TTAA 7 cut(s) 324, 366, 483, 1302, 1548, 1575, 1671
TscAI CASTG 8 cut(s) 238, 396, 515, 557, 630, 984, 1248, 1255
TseFI GTSAC 3 cut(s) 546, 1314, 1465
TseI GCWGC 6 cut(s) 52, 359, 518, 848, 881, 1334
Tsp45I GTSAC 3 cut(s) 546, 1314, 1465
TspMI CCCGGG 2 cut(s) 157, 1663
TspRI CASTG 8 cut(s) 238, 396, 515, 557, 630, 984, 1248, 1255
VneI GTGCAC 1 cut(s) 719
VpaK11BI GGWCC 2 cut(s) 998, 2160
XapI RAATTY 4 cut(s) 490, 1949, 2073, 2109
XbaI TCTAGA 1 cut(s) 1384
XceI RCATGY 2 cut(s) 1094, 1624
XcmI CCANNNNNNNNNTGG 1 cut(s) 68
XmaI CCCGGG 2 cut(s) 157, 1663
XmaJI CCTAGG 1 cut(s) 1862
XmnI GAANNNNTTC 1 cut(s) 299
XspI CTAG 6 cut(s) 224, 558, 1074, 1254, 1385, 1863
ZrmI AGTACT 1 cut(s) 1777
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.