FvH4_2g24280
ERF Family

Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Reverse (-)
19840545 .. 19845044
4500 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g24280.t4

Sequence Viewer

Length: 1395 bp
ATGGCCAACAAAGAGGATGTAGAAACTTCAAGAGAGCCACTCCTGAACAGAGAGGGATCAGCTCATGAAGGGCATCGATGGATGGTTTACCTCAGCACATTCGTCGCAGTCTGCGGCTCTTATGAGTTTGGATGCTGTGCAGGTTTTTCATCGCCTACTCAGGATGCCATCACTGATGATCTCAGTTTGTCATTAGCAGAGTATTCAATGTTTGGCTCCATTTTGACATTTGGTGCAATGATTGGTGCTATAACAATTGGTCCCATCGCTGATTTTATTGGTCGAAAAGGGGCCATGAGAGTGTCCAGTGCTTTTTGCGTTGCAGGTTGGCTAGCTATATACTTTGCTGAGAGTATTTGGCCTCTTGACATTGGGAGGCTGGCAAACGGTTATGGAATGGGAGCCTTTTCTTACGTGGTACCTGTTTTCATAGCTGAAATTGCTCCAAAGAATCTTCGGGGAAGGCTAACTGCTGTAAATCAGTTAATGATCTGTGCTGGAGTGTCCGTTTCGTACATAATTGGGGTAGTAGTGAGTTGGAGGGCTCTAGCATTAATCGGACTAATTCCTTGTGCTGTGATCATTTCCGGACTCTTCTTCGTTCCCGAGTCTCCACGATGGTTGGCAAAGACCGGAAAACATAAAGAGTTTGAAGTTGCACTACAGAAACTTCGTGGTGAAGATGCTGATGTATCTCATGAAGCAGCGGAAATCCAGGACTATATCGCAACCCTTGACCAGCTCCCAAAAGCCAAAATGCTGGATTTGTTTCAACGGAGATACTCGCGCTCAGTCATTATAGGAGTTGGTTTGATGGTCTGTCAACAATTTGGGGGAATCAACGGTGTCTGTTTCTATGTCAGCAGTATTTTTGAGCAAGCAGGATTTTCTTCAAGCATTGGAACTATAACCTATGCTATTCTTCAGGTTGTGGTTACTGGTATTGGGGCAGCCATAATGGATAAAGCTGGAAGGAAGCCTCTGATTTTGATTTCTGCATCAGGGTTGGTACTTGGCTGTGTCCTGACTGCCATTTCATTCTTTCTGAAGGTTAATGACTGGGCACTCGGTGCAGTTGGTGCGCTTGCCGTAACTGGCATACTGGTCTATATAGGATCATTTTCAATAGGAATGGGGGCTGTTCCTTGGGTTGTGATGTCTGAGATATTCCCCATCAATATTAAAGGACAGGCCGGAAGCTTAGCAACTTTAGTGAACTGGTTTGGAGCATGGTTGTGTTCCTACACTTTCAACTTCCTGATGAGTTGGAGCTCCTATGGCACCTTCATTCTGTATGCAGCAATCAATGGCCTAGCTATAGTGTTTGTGGTTTTCGTAGTACCTGAAACAAAGGGGAAAACCCTTGAACAGATCCAAGCAGCCATTAACAAATAG

Protein Analysis

465

Amino Acids

49.83

Weight (kDa)

6.45

Isoelectric Point (pI)

31.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sugar_tr PF00083 1 - 235 1.5e-51 Sugar (and other) transporter
MFS_1 PF07690 2 - 236 3.9e-16 Major Facilitator Superfamily
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 131, 314
Acc65I GGTACC 1 cut(s) 418
AccB1I GGYRCC 2 cut(s) 418, 1280
AccII CGCG 1 cut(s) 787
AccIII TCCGGA 1 cut(s) 587
AciI CCGC 2 cut(s) 114, 707
AclWI GGATC 3 cut(s) 64, 1123, 1366
AcoI YGGCCR 1 cut(s) 3
AcuI CTGAAG 2 cut(s) 908, 1067
AdeI CACNNNGTG 1 cut(s) 1070
AfaI GTAC 4 cut(s) 420, 515, 1011, 1341
AgsI TTSAA 8 cut(s) 30, 207, 653, 773, 894, 1125, 1252, 1367
AjnI CCWGG 1 cut(s) 714
AluBI AGCT 8 cut(s) 62, 335, 434, 742, 968, 1200, 1272, 1316
AluI AGCT 8 cut(s) 62, 335, 434, 742, 968, 1200, 1272, 1316
Alw21I GWGCWC 1 cut(s) 1274
Alw26I GTCTC 1 cut(s) 615
AlwI GGATC 3 cut(s) 64, 1123, 1366
Ama87I CYCGRG 1 cut(s) 605
Aor13HI TCCGGA 1 cut(s) 587
AoxI GGCC 5 cut(s) 3, 291, 359, 1191, 1309
ApeKI GCWGC 4 cut(s) 704, 950, 1298, 1379
AseI ATTAAT 1 cut(s) 554
Asp718I GGTACC 1 cut(s) 418
AspLEI GCGC 2 cut(s) 789, 1084
AspS9I GGNCC 2 cut(s) 260, 291
AsuHPI GGTGA 1 cut(s) 689
AsuNHI GCTAGC 1 cut(s) 331
AvaI CYCGRG 1 cut(s) 605
AvaII GGWCC 1 cut(s) 260
BaeGI GKGCMC 1 cut(s) 1066
BalI TGGCCA 1 cut(s) 5
BanI GGYRCC 2 cut(s) 418, 1280
BanII GRGCYC 2 cut(s) 547, 1274
BarI GAAGNNNNNNTAC 2 cut(s) 645, 677
Bbv12I GWGCWC 1 cut(s) 1274
BbvCI CCTCAGC 1 cut(s) 92
BbvI GCAGC 4 cut(s) 716, 962, 1310, 1391
BccI CCATC 7 cut(s) 72, 76, 176, 272, 612, 808, 1181
BceAI ACGGC 1 cut(s) 1073
BcgI CGANNNNNNTGC 2 cut(s) 85, 119
BciT130I CCWGG 1 cut(s) 716
BclI TGATCA 1 cut(s) 579
BcoDI GTCTC 1 cut(s) 615
BfaI CTAG 3 cut(s) 332, 548, 1313
BfmI CTRYAG 2 cut(s) 662, 1317
BfuAI ACCTGC 2 cut(s) 131, 314
BisI GCNGC 5 cut(s) 115, 705, 951, 1299, 1380
BlpI GCTNAGC 1 cut(s) 1201
BlsI GCNGC 5 cut(s) 116, 706, 952, 1300, 1381
Bme1390I CCNGG 1 cut(s) 716
Bme18I GGWCC 1 cut(s) 260
BmeT110I CYCGRG 1 cut(s) 605
BmgT120I GGNCC 2 cut(s) 260, 291
BmiI GGNNCC 6 cut(s) 217, 262, 292, 403, 420, 1282
BmrFI CCNGG 1 cut(s) 716
BmrI ACTGGG 1 cut(s) 1069
BmsI GCATC 5 cut(s) 82, 122, 154, 673, 1007
BmtI GCTAGC 1 cut(s) 335
BmuI ACTGGG 1 cut(s) 1069
BplI GAGNNNNNCTC 2 cut(s) 24, 56
BpmI CTGGAG 1 cut(s) 519
Bpu10I CCTNAGC 1 cut(s) 92
Bpu1102I GCTNAGC 1 cut(s) 1201
Bsa29I ATCGAT 1 cut(s) 76
BsaAI YACGTR 1 cut(s) 415
BsaJI CCNNGG 1 cut(s) 1145
BsaWI WCCGGW 2 cut(s) 587, 632
BsaXI ACNNNNNCTCC 2 cut(s) 492, 522
Bse1I ACTGG 6 cut(s) 306, 943, 1064, 1099, 1107, 1223
Bse3DI GCAATG 1 cut(s) 243
BseAI TCCGGA 1 cut(s) 587
BseBI CCWGG 1 cut(s) 716
BseCI ATCGAT 1 cut(s) 76
BseDI CCNNGG 1 cut(s) 1145
BseGI GGATG 4 cut(s) 22, 87, 137, 169
BseMI GCAATG 1 cut(s) 243
BseMII CTCAG 6 cut(s) 106, 173, 196, 339, 804, 1152
BseNI ACTGG 6 cut(s) 306, 943, 1064, 1099, 1107, 1223
BseSI GKGCMC 1 cut(s) 1066
BseXI GCAGC 4 cut(s) 716, 962, 1310, 1391
BsgI GTGCAG 2 cut(s) 159, 1092
Bsh1236I CGCG 1 cut(s) 787
BshFI GGCC 5 cut(s) 5, 293, 361, 1193, 1311
BshNI GGYRCC 2 cut(s) 418, 1280
BshVI ATCGAT 1 cut(s) 76
BsiHKAI GWGCWC 1 cut(s) 1274
BsiHKCI CYCGRG 1 cut(s) 605
BsiSI CCGG 3 cut(s) 588, 633, 1194
BslFI GGGAC 1 cut(s) 246
BsmAI GTCTC 1 cut(s) 615
BsmFI GGGAC 1 cut(s) 246
BsnI GGCC 5 cut(s) 5, 293, 361, 1193, 1311
BsoBI CYCGRG 1 cut(s) 605
Bsp1286I GDGCHC 3 cut(s) 547, 1066, 1274
Bsp13I TCCGGA 1 cut(s) 587
Bsp143I GATC 6 cut(s) 56, 178, 489, 579, 1115, 1371
Bsp1720I GCTNAGC 1 cut(s) 1201
BspACI CCGC 2 cut(s) 114, 707
BspANI GGCC 5 cut(s) 5, 293, 361, 1193, 1311
BspCNI CTCAG 6 cut(s) 105, 172, 195, 340, 803, 1153
BspDI ATCGAT 1 cut(s) 76
BspEI TCCGGA 1 cut(s) 587
BspFNI CGCG 1 cut(s) 787
BspHI TCATGA 2 cut(s) 64, 697
BspLI GGNNCC 6 cut(s) 217, 262, 292, 403, 420, 1282
BspMI ACCTGC 2 cut(s) 131, 314
BspOI GCTAGC 1 cut(s) 335
BspPI GGATC 3 cut(s) 64, 1123, 1366
BspT107I GGYRCC 2 cut(s) 418, 1280
BsrDI GCAATG 1 cut(s) 243
BsrI ACTGG 6 cut(s) 306, 943, 1064, 1099, 1107, 1223
BssECI CCNNGG 1 cut(s) 1145
BssMI GATC 6 cut(s) 56, 178, 489, 579, 1115, 1371
BssT1I CCWWGG 1 cut(s) 1145
Bst2UI CCWGG 1 cut(s) 716
Bst4CI ACNGT 2 cut(s) 389, 845
Bst6I CTCTTC 1 cut(s) 599
BstAPI GCANNNNNTGC 2 cut(s) 1070, 1079
BstBAI YACGTR 1 cut(s) 415
BstC8I GCNNGC 4 cut(s) 333, 381, 879, 1086
BstDEI CTNAG 7 cut(s) 92, 159, 182, 348, 790, 1161, 1201
BstF5I GGATG 4 cut(s) 22, 87, 137, 169
BstFNI CGCG 1 cut(s) 787
BstHHI GCGC 2 cut(s) 789, 1084
BstKTI GATC 6 cut(s) 59, 181, 492, 582, 1118, 1374
BstMAI GTCTC 1 cut(s) 615
BstMBI GATC 6 cut(s) 56, 178, 489, 579, 1115, 1371
BstMWI GCNNNNNNNGC 4 cut(s) 440, 1070, 1079, 1278
BstNI CCWGG 1 cut(s) 716
BstSCI CCNGG 1 cut(s) 714
BstSFI CTRYAG 2 cut(s) 662, 1317
BstSLI GKGCMC 1 cut(s) 1066
BstUI CGCG 1 cut(s) 787
BstV1I GCAGC 4 cut(s) 716, 962, 1310, 1391
BstX2I RGATCY 1 cut(s) 1371
BstXI CCANNNNNNTGG 1 cut(s) 760
BstYI RGATCY 1 cut(s) 1371
Bsu15I ATCGAT 1 cut(s) 76
BsuRI GGCC 5 cut(s) 5, 293, 361, 1193, 1311
BsuTUI ATCGAT 1 cut(s) 76
BtgZI GCGATG 2 cut(s) 135, 250
BtsCI GGATG 4 cut(s) 22, 87, 137, 169
BtsIMutI CAGTG 2 cut(s) 171, 313
BveI ACCTGC 2 cut(s) 131, 314
Cac8I GCNNGC 4 cut(s) 333, 381, 879, 1086
CciI TCATGA 2 cut(s) 64, 697
CfoI GCGC 2 cut(s) 789, 1084
Cfr13I GGNCC 2 cut(s) 260, 291
ClaI ATCGAT 1 cut(s) 76
Csp6I GTAC 4 cut(s) 419, 514, 1010, 1340
CspCI CAANNNNNGTGG 2 cut(s) 603, 638
CviAII CATG 4 cut(s) 65, 295, 698, 1230
CviQI GTAC 4 cut(s) 419, 514, 1010, 1340
DdeI CTNAG 7 cut(s) 92, 159, 182, 348, 790, 1161, 1201
DpnI GATC 6 cut(s) 58, 180, 491, 581, 1117, 1373
DpnII GATC 6 cut(s) 56, 178, 489, 579, 1115, 1371
DraIII CACNNNGTG 1 cut(s) 1070
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 599
EarI CTCTTC 1 cut(s) 599
Ecl136II GAGCTC 1 cut(s) 1272
Eco130I CCWWGG 1 cut(s) 1145
Eco24I GRGCYC 2 cut(s) 547, 1274
Eco47I GGWCC 1 cut(s) 260
Eco53kI GAGCTC 1 cut(s) 1272
Eco57I CTGAAG 2 cut(s) 908, 1067
Eco88I CYCGRG 1 cut(s) 605
EcoICRI GAGCTC 1 cut(s) 1272
EcoRII CCWGG 1 cut(s) 714
EcoT14I CCWWGG 1 cut(s) 1145
EcoT38I GRGCYC 2 cut(s) 547, 1274
ErhI CCWWGG 1 cut(s) 1145
FaeI CATG 4 cut(s) 68, 298, 701, 1233
FaqI GGGAC 1 cut(s) 246
FatI CATG 4 cut(s) 64, 294, 697, 1229
FbaI TGATCA 1 cut(s) 579
Fnu4HI GCNGC 5 cut(s) 115, 705, 951, 1299, 1380
FokI GGATG 4 cut(s) 29, 94, 144, 176
FriOI GRGCYC 2 cut(s) 547, 1274
Fsp4HI GCNGC 5 cut(s) 115, 705, 951, 1299, 1380
FspBI CTAG 3 cut(s) 332, 548, 1313
GlaI GCGC 2 cut(s) 788, 1083
GluI GCNGC 5 cut(s) 115, 705, 951, 1299, 1380
GsuI CTGGAG 1 cut(s) 519
HaeIII GGCC 5 cut(s) 5, 293, 361, 1193, 1311
HapII CCGG 3 cut(s) 588, 633, 1194
HhaI GCGC 2 cut(s) 789, 1084
Hin1II CATG 4 cut(s) 68, 298, 701, 1233
Hin6I GCGC 2 cut(s) 787, 1082
HinP1I GCGC 2 cut(s) 787, 1082
HincII GTYRAC 1 cut(s) 824
HindII GTYRAC 1 cut(s) 824
HindIII AAGCTT 1 cut(s) 1198
HinfI GANTC 4 cut(s) 451, 591, 608, 837
HpaII CCGG 3 cut(s) 588, 633, 1194
HphI GGTGA 1 cut(s) 689
Hpy166II GTNNAC 3 cut(s) 88, 824, 1216
Hpy188I TCNGA 4 cut(s) 560, 984, 1047, 1162
Hpy8I GTNNAC 3 cut(s) 88, 824, 1216
Hpy99I CGWCG 1 cut(s) 107
HpyAV CCTTC 5 cut(s) 62, 456, 966, 1042, 1294
HpyCH4III ACNGT 2 cut(s) 389, 845
HpyCH4IV ACGT 1 cut(s) 414
HpyCH4V TGCA 7 cut(s) 140, 236, 323, 659, 998, 1073, 1298
HpyF10VI GCNNNNNNNGC 4 cut(s) 440, 1070, 1079, 1278
HpyF3I CTNAG 7 cut(s) 92, 159, 182, 348, 790, 1161, 1201
HpySE526I ACGT 1 cut(s) 414
Hsp92II CATG 4 cut(s) 68, 298, 701, 1233
HspAI GCGC 2 cut(s) 787, 1082
Kpn2I TCCGGA 1 cut(s) 587
KpnI GGTACC 1 cut(s) 422
Ksp22I TGATCA 1 cut(s) 579
Kzo9I GATC 6 cut(s) 56, 178, 489, 579, 1115, 1371
LmnI GCTCC 7 cut(s) 221, 401, 448, 747, 1226, 1269, 1277
Lsp1109I GCAGC 4 cut(s) 716, 962, 1310, 1391
LweI GCATC 5 cut(s) 82, 122, 154, 673, 1007
MaeI CTAG 3 cut(s) 332, 548, 1313
MaeII ACGT 1 cut(s) 414
MaeIII GTNAC 2 cut(s) 934, 1090
MalI GATC 6 cut(s) 58, 180, 491, 581, 1117, 1373
MboI GATC 6 cut(s) 56, 178, 489, 579, 1115, 1371
MboII GAAGA 6 cut(s) 446, 586, 589, 692, 882, 914
MfeI CAATTG 1 cut(s) 255
MflI RGATCY 1 cut(s) 1371
MhlI GDGCHC 3 cut(s) 547, 1066, 1274
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 5 cut(s) 255, 438, 519, 564, 827
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 2 cut(s) 585, 617
MmeI TCCRAC 2 cut(s) 518, 1247
MnlI CCTC 7 cut(s) 7, 46, 101, 369, 372, 534, 990
Mox20I TGGCCA 1 cut(s) 5
MroI TCCGGA 1 cut(s) 587
MscI TGGCCA 1 cut(s) 5
MseI TTAA 5 cut(s) 485, 554, 1053, 1182, 1386
MslI CAYNNNNRTG 2 cut(s) 299, 1234
Msp20I TGGCCA 1 cut(s) 5
MspA1I CMGCKG 1 cut(s) 707
MspI CCGG 3 cut(s) 588, 633, 1194
MspR9I CCNGG 1 cut(s) 716
MunI CAATTG 1 cut(s) 255
MvaI CCWGG 1 cut(s) 716
MvnI CGCG 1 cut(s) 787
MwoI GCNNNNNNNGC 4 cut(s) 440, 1070, 1079, 1278
NdeII GATC 6 cut(s) 56, 178, 489, 579, 1115, 1371
NheI GCTAGC 1 cut(s) 331
NlaIII CATG 4 cut(s) 68, 298, 701, 1233
NlaIV GGNNCC 6 cut(s) 217, 262, 292, 403, 420, 1282
PagI TCATGA 2 cut(s) 64, 697
PfeI GAWTC 2 cut(s) 451, 837
PfoI TCCNGGA 1 cut(s) 714
PkrI GCNGC 5 cut(s) 116, 706, 952, 1300, 1381
PleI GAGTC 2 cut(s) 585, 616
PpsI GAGTC 2 cut(s) 585, 616
Ppu21I YACGTR 1 cut(s) 415
PshBI ATTAAT 1 cut(s) 554
Psp124BI GAGCTC 1 cut(s) 1274
Psp6I CCWGG 1 cut(s) 714
PspGI CCWGG 1 cut(s) 714
PspN4I GGNNCC 6 cut(s) 217, 262, 292, 403, 420, 1282
PspPI GGNCC 2 cut(s) 260, 291
PsuI RGATCY 1 cut(s) 1371
RsaI GTAC 4 cut(s) 420, 515, 1011, 1341
RsaNI GTAC 4 cut(s) 419, 514, 1010, 1340
RseI CAYNNNNRTG 2 cut(s) 299, 1234
SacI GAGCTC 1 cut(s) 1274
SaqAI TTAA 5 cut(s) 485, 554, 1053, 1182, 1386
SatI GCNGC 5 cut(s) 115, 705, 951, 1299, 1380
Sau3AI GATC 6 cut(s) 56, 178, 489, 579, 1115, 1371
Sau96I GGNCC 2 cut(s) 260, 291
SchI GAGTC 2 cut(s) 585, 617
ScrFI CCNGG 1 cut(s) 716
SduI GDGCHC 3 cut(s) 547, 1066, 1274
SfaNI GCATC 5 cut(s) 82, 122, 154, 673, 1007
SfcI CTRYAG 2 cut(s) 662, 1317
SinI GGWCC 1 cut(s) 260
SmiMI CAYNNNNRTG 2 cut(s) 299, 1234
Sse9I AATT 5 cut(s) 255, 438, 519, 564, 827
SsiI CCGC 2 cut(s) 114, 707
SspI AATATT 1 cut(s) 1180
SspMI CTAG 3 cut(s) 332, 548, 1313
SstI GAGCTC 1 cut(s) 1274
StyD4I CCNGG 1 cut(s) 714
StyI CCWWGG 1 cut(s) 1145
TaaI ACNGT 2 cut(s) 389, 845
TaiI ACGT 1 cut(s) 417
TaqI TCGA 2 cut(s) 76, 283
TasI AATT 5 cut(s) 255, 438, 519, 564, 827
TauI GCSGC 1 cut(s) 117
TfiI GAWTC 2 cut(s) 451, 837
Tru1I TTAA 5 cut(s) 485, 554, 1053, 1182, 1386
Tru9I TTAA 5 cut(s) 485, 554, 1053, 1182, 1386
TscAI CASTG 2 cut(s) 178, 313
TseI GCWGC 4 cut(s) 704, 950, 1298, 1379
TspDTI ATGAA 6 cut(s) 81, 138, 418, 714, 1026, 1276
TspGWI ACGGA 2 cut(s) 496, 790
TspRI CASTG 2 cut(s) 178, 313
VpaK11BI GGWCC 1 cut(s) 260
VspI ATTAAT 1 cut(s) 554
XspI CTAG 3 cut(s) 332, 548, 1313
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.